View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9779_low_47 (Length: 304)

Name: NF9779_low_47
Description: NF9779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9779_low_47
NF9779_low_47
[»] chr3 (67 HSPs)
chr3 (1-118)||(40734389-40734506)
chr3 (1-120)||(5236616-5236735)
chr3 (8-120)||(9581172-9581284)
chr3 (1-120)||(7764357-7764475)
chr3 (1-120)||(19684049-19684168)
chr3 (9-120)||(39153529-39153640)
chr3 (1-120)||(40735272-40735391)
chr3 (1-118)||(22835162-22835279)
chr3 (1-120)||(760736-760855)
chr3 (1-120)||(5260484-5260602)
chr3 (1-120)||(29682248-29682367)
chr3 (1-120)||(29810757-29810876)
chr3 (1-120)||(45095054-45095172)
chr3 (1-104)||(5258305-5258407)
chr3 (1-120)||(7762155-7762273)
chr3 (1-120)||(51398703-51398822)
chr3 (1-120)||(16498919-16499038)
chr3 (1-120)||(29812952-29813071)
chr3 (1-120)||(37408348-37408466)
chr3 (1-84)||(44331470-44331553)
chr3 (1-120)||(53921663-53921782)
chr3 (1-115)||(32890997-32891111)
chr3 (1-120)||(9666627-9666747)
chr3 (1-120)||(26386641-26386760)
chr3 (27-120)||(32744613-32744705)
chr3 (1-120)||(9636287-9636406)
chr3 (1-97)||(23198099-23198194)
chr3 (1-97)||(23200298-23200393)
chr3 (2-114)||(23392070-23392183)
chr3 (3-114)||(23410491-23410603)
chr3 (1-75)||(29196547-29196622)
chr3 (1-75)||(44700638-44700713)
chr3 (1-75)||(31314379-31314453)
chr3 (1-55)||(4569906-4569960)
chr3 (1-55)||(5434038-5434091)
chr3 (1-55)||(43401962-43402015)
chr3 (1-55)||(54593659-54593712)
chr3 (3-76)||(2075219-2075292)
chr3 (1-55)||(6095759-6095812)
chr3 (1-55)||(31340361-31340414)
chr3 (1-55)||(41819683-41819737)
chr3 (1-55)||(43403905-43403958)
chr3 (5-55)||(46173321-46173370)
chr3 (38-75)||(3323511-3323548)
chr3 (7-118)||(5373114-5373233)
chr3 (38-114)||(27986236-27986313)
chr3 (41-120)||(800987-801067)
chr3 (37-73)||(24694988-24695024)
chr3 (3-55)||(36018806-36018858)
chr3 (38-114)||(39032335-39032411)
chr3 (38-73)||(16264578-16264613)
chr3 (38-73)||(26299217-26299252)
chr3 (38-73)||(26928421-26928456)
chr3 (77-120)||(29196637-29196680)
chr3 (38-73)||(36029322-36029357)
chr3 (38-73)||(40592604-40592639)
chr3 (176-255)||(46493843-46493921)
chr3 (1-55)||(46860427-46860482)
chr3 (38-73)||(47923726-47923761)
chr3 (1-55)||(30236080-30236133)
chr3 (1-55)||(49199630-49199683)
chr3 (38-75)||(6794535-6794572)
chr3 (38-71)||(8126859-8126892)
chr3 (9-50)||(35138874-35138915)
chr3 (38-74)||(3328178-3328214)
chr3 (41-73)||(21711454-21711486)
chr3 (37-73)||(27038279-27038315)
[»] chr8 (53 HSPs)
chr8 (1-120)||(43036312-43036431)
chr8 (1-118)||(4731549-4731666)
chr8 (1-120)||(6598861-6598980)
chr8 (1-120)||(6674314-6674433)
chr8 (1-120)||(15212675-15212794)
chr8 (1-120)||(33352039-33352158)
chr8 (8-120)||(5689160-5689272)
chr8 (1-144)||(18106238-18106382)
chr8 (1-120)||(27811167-27811286)
chr8 (1-119)||(44303744-44303861)
chr8 (1-120)||(12702799-12702917)
chr8 (1-120)||(17982542-17982660)
chr8 (1-120)||(31218146-31218264)
chr8 (1-120)||(42498083-42498201)
chr8 (10-119)||(41365016-41365125)
chr8 (1-120)||(3303830-3303949)
chr8 (6-120)||(30143231-30143343)
chr8 (1-120)||(34254490-34254607)
chr8 (1-120)||(1746379-1746497)
chr8 (1-120)||(19945521-19945639)
chr8 (1-120)||(34256666-34256783)
chr8 (1-118)||(1292623-1292740)
chr8 (1-118)||(1345531-1345648)
chr8 (1-97)||(4743363-4743459)
chr8 (1-104)||(4162405-4162508)
chr8 (1-120)||(10929690-10929807)
chr8 (1-118)||(18141711-18141829)
chr8 (10-104)||(41366783-41366877)
chr8 (33-120)||(4733698-4733785)
chr8 (38-120)||(10015037-10015119)
chr8 (1-120)||(40320956-40321088)
chr8 (1-54)||(8965851-8965904)
chr8 (1-69)||(30291545-30291614)
chr8 (1-120)||(8153650-8153772)
chr8 (1-114)||(9765642-9765753)
chr8 (1-67)||(19491859-19491924)
chr8 (38-113)||(3051349-3051425)
chr8 (34-104)||(3318741-3318813)
chr8 (1-64)||(18655345-18655408)
chr8 (1-55)||(4283479-4283532)
chr8 (1-55)||(40221700-40221753)
chr8 (1-55)||(42435151-42435204)
chr8 (38-114)||(4696399-4696476)
chr8 (38-114)||(7412569-7412646)
chr8 (31-119)||(29796512-29796601)
chr8 (38-73)||(4456257-4456292)
chr8 (8-55)||(11383941-11383987)
chr8 (53-120)||(19948533-19948600)
chr8 (67-118)||(30291483-30291534)
chr8 (1-55)||(44353747-44353801)
chr8 (41-97)||(2627654-2627711)
chr8 (38-75)||(7493004-7493041)
chr8 (1-41)||(3772160-3772200)
[»] chr7 (66 HSPs)
chr7 (1-120)||(47676296-47676415)
chr7 (1-120)||(43864133-43864252)
chr7 (1-118)||(48491470-48491587)
chr7 (1-120)||(14069993-14070112)
chr7 (1-120)||(14380021-14380140)
chr7 (1-120)||(29990944-29991062)
chr7 (1-120)||(38671382-38671501)
chr7 (1-119)||(31733129-31733247)
chr7 (3-120)||(24526059-24526176)
chr7 (1-120)||(1113546-1113665)
chr7 (1-120)||(2761462-2761581)
chr7 (1-120)||(4586050-4586169)
chr7 (1-120)||(18126533-18126652)
chr7 (1-120)||(48489320-48489439)
chr7 (1-120)||(24514921-24515039)
chr7 (1-120)||(30024892-30025011)
chr7 (1-120)||(31518684-31518803)
chr7 (1-120)||(47674103-47674222)
chr7 (1-119)||(4178665-4178782)
chr7 (1-119)||(26417206-26417324)
chr7 (1-120)||(4538700-4538819)
chr7 (1-120)||(23554929-23555047)
chr7 (1-119)||(19502068-19502185)
chr7 (1-119)||(31105553-31105671)
chr7 (1-104)||(35853820-35853922)
chr7 (1-120)||(41649170-41649288)
chr7 (14-120)||(25615752-25615858)
chr7 (1-97)||(48408714-48408810)
chr7 (1-120)||(496143-496262)
chr7 (1-81)||(27347745-27347825)
chr7 (1-119)||(36574675-36574794)
chr7 (3-120)||(4253691-4253809)
chr7 (1-75)||(8153276-8153350)
chr7 (1-75)||(36146568-36146643)
chr7 (5-75)||(12098023-12098093)
chr7 (1-75)||(41317594-41317668)
chr7 (1-120)||(23343863-23343983)
chr7 (14-97)||(39731288-39731371)
chr7 (1-96)||(23565224-23565316)
chr7 (7-97)||(25767124-25767210)
chr7 (42-119)||(6570484-6570561)
chr7 (1-55)||(2361132-2361185)
chr7 (1-55)||(34310876-34310929)
chr7 (8-74)||(5514176-5514243)
chr7 (1-55)||(4508866-4508919)
chr7 (38-114)||(9189797-9189875)
chr7 (38-75)||(9185005-9185042)
chr7 (38-75)||(20284318-20284355)
chr7 (38-75)||(23402844-23402881)
chr7 (38-114)||(2580619-2580695)
chr7 (38-73)||(2479565-2479600)
chr7 (77-120)||(12098108-12098151)
chr7 (38-73)||(21989137-21989172)
chr7 (1-75)||(30843392-30843467)
chr7 (77-120)||(41317683-41317726)
chr7 (1-55)||(3258949-3259003)
chr7 (1-55)||(4510708-4510761)
chr7 (1-55)||(4512550-4512603)
chr7 (5-55)||(6431926-6431975)
chr7 (1-55)||(8359477-8359530)
chr7 (40-74)||(9235414-9235448)
chr7 (1-51)||(22269931-22269981)
chr7 (40-73)||(44847958-44847991)
chr7 (3-55)||(2390237-2390288)
chr7 (14-97)||(43504321-43504404)
chr7 (3-55)||(48599496-48599547)
[»] chr4 (66 HSPs)
chr4 (1-120)||(48142931-48143050)
chr4 (1-120)||(5429568-5429687)
chr4 (1-120)||(29999966-30000084)
chr4 (1-120)||(47038569-47038688)
chr4 (1-120)||(52082817-52082936)
chr4 (1-120)||(52095522-52095641)
chr4 (1-120)||(54200066-54200185)
chr4 (1-120)||(5871709-5871828)
chr4 (1-119)||(12739710-12739828)
chr4 (1-119)||(12747916-12748034)
chr4 (1-120)||(13009591-13009710)
chr4 (1-120)||(26175796-26175915)
chr4 (1-120)||(29254383-29254502)
chr4 (1-120)||(34570574-34570693)
chr4 (1-120)||(56178797-56178915)
chr4 (1-120)||(37740515-37740633)
chr4 (1-120)||(9927618-9927736)
chr4 (1-119)||(5370247-5370364)
chr4 (1-118)||(36994416-36994532)
chr4 (1-113)||(12745596-12745708)
chr4 (1-120)||(24969000-24969120)
chr4 (2-117)||(52467515-52467631)
chr4 (1-97)||(31474062-31474158)
chr4 (1-114)||(6542341-6542455)
chr4 (14-104)||(13992459-13992549)
chr4 (1-75)||(36463549-36463623)
chr4 (1-67)||(48893802-48893868)
chr4 (1-75)||(51336998-51337072)
chr4 (3-75)||(4587892-4587964)
chr4 (1-75)||(45687343-45687417)
chr4 (6-118)||(5208007-5208120)
chr4 (1-75)||(37229882-37229957)
chr4 (1-113)||(48142538-48142651)
chr4 (63-120)||(52093886-52093943)
chr4 (41-120)||(3909996-3910075)
chr4 (1-55)||(55085524-55085578)
chr4 (1-55)||(40632400-40632453)
chr4 (1-55)||(54882975-54883028)
chr4 (1-49)||(3913408-3913456)
chr4 (1-55)||(2209668-2209721)
chr4 (1-55)||(46703454-46703508)
chr4 (38-75)||(5112466-5112503)
chr4 (38-114)||(31985424-31985501)
chr4 (67-120)||(46147581-46147634)
chr4 (30-116)||(6677360-6677448)
chr4 (38-73)||(3777778-3777813)
chr4 (38-73)||(5396504-5396539)
chr4 (38-73)||(6743248-6743283)
chr4 (38-73)||(10047610-10047645)
chr4 (38-73)||(16623126-16623161)
chr4 (38-73)||(16628705-16628740)
chr4 (77-120)||(45687432-45687475)
chr4 (10-75)||(5349840-5349905)
chr4 (1-55)||(6655911-6655964)
chr4 (1-55)||(8665362-8665416)
chr4 (1-55)||(12119492-12119546)
chr4 (1-51)||(21688207-21688256)
chr4 (30-118)||(37755112-37755202)
chr4 (1-55)||(50674006-50674059)
chr4 (14-71)||(52065534-52065592)
chr4 (40-73)||(5269033-5269066)
chr4 (1-65)||(8648082-8648147)
chr4 (38-75)||(39774136-39774173)
chr4 (41-73)||(25861866-25861898)
chr4 (8-71)||(29056295-29056359)
chr4 (41-88)||(31495509-31495557)
[»] chr1 (62 HSPs)
chr1 (1-120)||(31659127-31659246)
chr1 (1-120)||(1833411-1833530)
chr1 (1-118)||(197068-197185)
chr1 (1-118)||(10925114-10925231)
chr1 (1-120)||(3847281-3847400)
chr1 (1-120)||(13138134-13138253)
chr1 (1-120)||(28223581-28223700)
chr1 (1-118)||(44455051-44455168)
chr1 (1-120)||(834327-834446)
chr1 (1-120)||(3156755-3156873)
chr1 (1-120)||(8550947-8551066)
chr1 (1-120)||(28220386-28220505)
chr1 (3-120)||(15820196-15820313)
chr1 (1-120)||(3189220-3189338)
chr1 (1-120)||(3198037-3198155)
chr1 (1-120)||(3206876-3206994)
chr1 (1-120)||(37503714-37503833)
chr1 (1-120)||(45644515-45644634)
chr1 (1-120)||(49918238-49918358)
chr1 (1-120)||(20762561-20762679)
chr1 (1-120)||(50169370-50169489)
chr1 (1-119)||(37560029-37560147)
chr1 (1-120)||(13659496-13659615)
chr1 (1-120)||(4552797-4552916)
chr1 (1-120)||(23555425-23555544)
chr1 (1-120)||(46064807-46064926)
chr1 (3-120)||(928139-928257)
chr1 (1-75)||(50167335-50167409)
chr1 (1-120)||(40122358-40122477)
chr1 (10-93)||(30476618-30476700)
chr1 (1-120)||(28265714-28265845)
chr1 (40-104)||(13316517-13316581)
chr1 (11-97)||(51765307-51765392)
chr1 (1-120)||(44650323-44650443)
chr1 (26-75)||(777177-777226)
chr1 (1-55)||(11348653-11348706)
chr1 (1-55)||(13547249-13547302)
chr1 (1-55)||(13549160-13549213)
chr1 (1-55)||(29136202-29136255)
chr1 (1-55)||(37033233-37033286)
chr1 (1-55)||(37879071-37879124)
chr1 (1-67)||(41360857-41360922)
chr1 (1-46)||(16455585-16455630)
chr1 (1-54)||(31925867-31925919)
chr1 (1-55)||(193566-193619)
chr1 (1-55)||(37168252-37168305)
chr1 (1-55)||(42298135-42298188)
chr1 (1-55)||(47115126-47115179)
chr1 (1-61)||(19754442-19754502)
chr1 (38-75)||(22819660-22819697)
chr1 (38-75)||(47098656-47098693)
chr1 (38-75)||(47102670-47102707)
chr1 (38-73)||(3281936-3281971)
chr1 (38-73)||(13604455-13604490)
chr1 (38-73)||(16124347-16124382)
chr1 (1-52)||(19752643-19752693)
chr1 (77-120)||(50167424-50167467)
chr1 (1-55)||(34603530-34603584)
chr1 (1-55)||(47255500-47255553)
chr1 (40-73)||(37069998-37070031)
chr1 (38-118)||(8281547-8281630)
chr1 (38-114)||(24202556-24202635)
[»] chr6 (31 HSPs)
chr6 (1-118)||(28137568-28137685)
chr6 (1-120)||(9183191-9183310)
chr6 (1-120)||(5406359-5406477)
chr6 (1-120)||(5410684-5410802)
chr6 (14-120)||(16567095-16567201)
chr6 (1-120)||(5413553-5413671)
chr6 (1-120)||(33211345-33211464)
chr6 (1-117)||(33160513-33160629)
chr6 (1-120)||(16452490-16452608)
chr6 (9-120)||(26954453-26954564)
chr6 (14-120)||(16568932-16569038)
chr6 (1-119)||(30834697-30834814)
chr6 (1-97)||(2171691-2171787)
chr6 (9-120)||(31404842-31404953)
chr6 (1-75)||(3039063-3039137)
chr6 (1-75)||(4045356-4045431)
chr6 (1-55)||(21593619-21593672)
chr6 (38-114)||(24435763-24435839)
chr6 (38-73)||(21356266-21356301)
chr6 (1-55)||(603240-603293)
chr6 (1-55)||(3808869-3808922)
chr6 (18-87)||(6097610-6097679)
chr6 (38-114)||(5757269-5757346)
chr6 (6-55)||(26830289-26830337)
chr6 (38-73)||(5017329-5017364)
chr6 (38-73)||(5572076-5572111)
chr6 (1-55)||(2973099-2973152)
chr6 (77-127)||(3039152-3039202)
chr6 (1-55)||(5043582-5043635)
chr6 (41-97)||(3072952-3073009)
chr6 (40-73)||(22709241-22709274)
[»] chr5 (46 HSPs)
chr5 (1-120)||(28750815-28750934)
chr5 (1-120)||(42428590-42428709)
chr5 (1-120)||(533658-533777)
chr5 (1-120)||(31182862-31182981)
chr5 (1-120)||(5887576-5887695)
chr5 (5-120)||(13488092-13488207)
chr5 (1-120)||(39468709-39468828)
chr5 (1-120)||(42426395-42426514)
chr5 (1-118)||(13239643-13239759)
chr5 (1-120)||(25412651-25412769)
chr5 (1-120)||(36074205-36074323)
chr5 (1-119)||(32636714-32636832)
chr5 (1-118)||(537916-538033)
chr5 (1-93)||(8566106-8566198)
chr5 (1-97)||(19806296-19806391)
chr5 (1-120)||(3075818-3075937)
chr5 (1-120)||(13342950-13343068)
chr5 (1-120)||(33831569-33831688)
chr5 (1-120)||(42926782-42926901)
chr5 (1-120)||(16451970-16452088)
chr5 (1-120)||(30182478-30182596)
chr5 (1-120)||(30683081-30683199)
chr5 (1-120)||(42310095-42310214)
chr5 (14-97)||(16409394-16409477)
chr5 (14-97)||(26177802-26177885)
chr5 (1-73)||(37439070-37439141)
chr5 (14-97)||(9789390-9789473)
chr5 (14-97)||(18441814-18441897)
chr5 (14-97)||(26170693-26170776)
chr5 (1-55)||(213420-213473)
chr5 (1-55)||(5058002-5058055)
chr5 (1-55)||(28278271-28278324)
chr5 (1-55)||(40147216-40147269)
chr5 (38-75)||(11181663-11181700)
chr5 (38-75)||(17003790-17003827)
chr5 (38-75)||(24553358-24553395)
chr5 (38-75)||(28832486-28832523)
chr5 (145-200)||(3426337-3426392)
chr5 (38-73)||(9353165-9353200)
chr5 (38-73)||(11916805-11916840)
chr5 (38-73)||(36932181-36932216)
chr5 (40-73)||(14520461-14520494)
chr5 (1-54)||(16641100-16641153)
chr5 (38-75)||(31300426-31300463)
chr5 (30-97)||(3325825-3325893)
chr5 (76-120)||(16649857-16649901)
[»] chr2 (50 HSPs)
chr2 (1-120)||(39284774-39284893)
chr2 (1-120)||(42362241-42362360)
chr2 (3-120)||(11151753-11151870)
chr2 (1-120)||(723904-724023)
chr2 (1-120)||(11690390-11690509)
chr2 (1-97)||(29867781-29867877)
chr2 (1-120)||(2334578-2334696)
chr2 (1-120)||(17057529-17057648)
chr2 (1-120)||(17085512-17085631)
chr2 (1-120)||(38312129-38312248)
chr2 (3-120)||(33162612-33162729)
chr2 (1-118)||(34139931-34140048)
chr2 (4-120)||(36988239-36988354)
chr2 (1-120)||(5723415-5723533)
chr2 (1-120)||(14633986-14634105)
chr2 (1-120)||(36318169-36318288)
chr2 (1-120)||(45099644-45099762)
chr2 (1-120)||(36205824-36205942)
chr2 (1-120)||(4503293-4503411)
chr2 (28-120)||(14202594-14202686)
chr2 (8-87)||(24885583-24885662)
chr2 (1-75)||(36773496-36773570)
chr2 (1-120)||(6595167-6595285)
chr2 (8-118)||(12123751-12123862)
chr2 (11-97)||(4484501-4484587)
chr2 (1-74)||(13121703-13121777)
chr2 (3-66)||(11067248-11067311)
chr2 (14-97)||(32289484-32289567)
chr2 (1-50)||(17450550-17450599)
chr2 (1-97)||(30833257-30833352)
chr2 (40-114)||(8389940-8390015)
chr2 (1-67)||(45726871-45726937)
chr2 (1-74)||(11049484-11049558)
chr2 (1-55)||(35447044-35447097)
chr2 (1-75)||(7815433-7815508)
chr2 (1-55)||(1631892-1631945)
chr2 (1-55)||(42288270-42288323)
chr2 (1-120)||(5700282-5700403)
chr2 (38-114)||(17865434-17865511)
chr2 (40-75)||(15903721-15903756)
chr2 (38-73)||(21630174-21630209)
chr2 (38-73)||(23078304-23078339)
chr2 (38-73)||(34389080-34389115)
chr2 (38-73)||(36757595-36757630)
chr2 (77-120)||(36773438-36773481)
chr2 (38-112)||(39483162-39483237)
chr2 (38-73)||(40739063-40739098)
chr2 (1-75)||(17490302-17490376)
chr2 (38-75)||(10445298-10445335)
chr2 (38-104)||(41586351-41586419)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-120)||(20575-20694)
[»] scaffold0006 (3 HSPs)
scaffold0006 (1-120)||(149257-149376)
scaffold0006 (38-73)||(133112-133147)
scaffold0006 (41-73)||(2726-2758)
[»] scaffold1519 (1 HSPs)
scaffold1519 (1-104)||(822-923)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-120)||(434422-434540)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-75)||(114537-114610)
scaffold0016 (77-119)||(114480-114522)
[»] scaffold0491 (2 HSPs)
scaffold0491 (1-89)||(11323-11410)
scaffold0491 (1-91)||(8897-8986)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-61)||(11506-11565)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-55)||(7282-7335)
[»] scaffold0140 (1 HSPs)
scaffold0140 (38-114)||(8208-8285)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-65)||(80443-80507)
[»] scaffold0129 (1 HSPs)
scaffold0129 (27-93)||(19125-19191)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-55)||(18163-18216)


Alignment Details
Target: chr3 (Bit Score: 98; Significance: 3e-48; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 40734506 - 40734389
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  40734506 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 40734407  T
Q  101 agttctctcctttgattt 118  Q
    |||| |||||||||||||    
T  40734406 agttatctcctttgattt 40734389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5236616 - 5236735
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  5236616 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 5236715  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  |||||| |||||||    
T  5236716 agttacctccttcgatttcc 5236735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 9581284 - 9581172
Alignment:
Q  8 aatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctc 107  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||  |    
T  9581284 aatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaagttaac 9581185  T
Q  108 tcctttgatttcc 120  Q
    |||||||||||||    
T  9581184 tcctttgatttcc 9581172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 7764475 - 7764357
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||    
T  7764475 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcctaacccaagagaaatctaatcaaagaccctcaactctaa 7764377  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  7764376 agttacctcctttgatttcc 7764357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 19684049 - 19684168
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| ||||||||||||| || | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  19684049 tctcacaaatgaacaagacattcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaa 19684148  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  19684149 agttaactcctttgatttcc 19684168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 39153529 - 39153640
Alignment:
Q  9 atgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctct 108  Q
    ||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||  ||    
T  39153529 atgaacaagacactcaatgattttcattcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacct 39153628  T
Q  109 cctttgatttcc 120  Q
    ||||||||||||    
T  39153629 cctttgatttcc 39153640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 40735391 - 40735272
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  40735391 tctcaccaatgaacaagacactcaatgattttcacttttccaaggtgtttacaatgtttcctaacccaagagaactttaatcaaagaccctcaaccctaa 40735292  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  40735291 agttacctcctttgatttcc 40735272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22835162 - 22835279
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||| ||    
T  22835162 tctcacaaatgaacaagacactcaatgattttcactcacccaaggtgattacaatgtttcccaacacaagagaactctaatcaaagaccctcaaccctaa 22835261  T
Q  101 agttctctcctttgattt 118  Q
    ||||  ||||||||||||    
T  22835262 agttacctcctttgattt 22835279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 760855 - 760736
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | |||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  760855 tctcacaaatgaacaagacactcaatgattttcactcatccaaggtgtttataatgtttcccaacccaagagaactctaatcaaagacccttaaccctaa 760756  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  760755 agttaactcctttgatttcc 760736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5260484 - 5260602
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||||| |||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  5260484 tctcaccaatgaccaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaa 5260582  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  5260583 agttgcctcctttgatttcc 5260602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 29682367 - 29682248
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  29682367 tctcacaaataaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaa 29682268  T
Q  101 agttctctcctttgatttcc 120  Q
    | ||  ||||||||||||||    
T  29682267 atttaactcctttgatttcc 29682248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 29810876 - 29810757
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||| |||||| || | ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||    
T  29810876 tctcaccaatgaataagacattcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaa 29810777  T
Q  101 agttctctcctttgatttcc 120  Q
    | ||  ||||||||||||||    
T  29810776 aattacctcctttgatttcc 29810757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 45095172 - 45095054
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  45095172 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaa 45095074  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||| ||||||||||    
T  45095073 agttgcctcttttgatttcc 45095054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5258305 - 5258407
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  5258305 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaa 5258403  T
Q  101 agtt 104  Q
    ||||    
T  5258404 agtt 5258407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 7762273 - 7762155
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||| ||||||||| | |||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||    
T  7762273 tctcaccaatgaataagacactcaatgattttcactcacc-aaggtgttcacaatatttcccaacccaagagaactctaatcaaagaccctcaaccctaa 7762175  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  7762174 agttacctcctttgatttcc 7762155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 51398822 - 51398703
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||| ||||||||||||||||| | |||||||||||| |||||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||| ||    
T  51398822 tctcatcaatgaacaagacactcaatgattttcactcatccaaggtgtttacaatatttcccaacccaagaaaactctaatcaaagactctcaaccctaa 51398723  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  51398722 agttacctcctttgatttcc 51398703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16499038 - 16498919
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||  ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||  |    
T  16499038 tctcacaaatgaacaagacactcaatgattttcactaccccaaggtgtttacaatgtttctcaacctaagagaactctaatcaaagaccctcaacccaca 16498939  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  16498938 agttacctcctttgatttcc 16498919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 29813071 - 29812952
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||| |||||| | ||| | ||||||||||||||||| |||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||    
T  29813071 tctcaccaattaacaagcccctcaatgattttcactcacccaatgtgtttacaatgcttcccaacccaagagaactttaatcaaagaccctcaaccctaa 29812972  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  29812971 agttacctcctttgatttcc 29812952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 37408466 - 37408348
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||| | ||||| ||    
T  37408466 tctcaccaatgaacaagacactcaataattttcactcact-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccataaaccctaa 37408368  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  37408367 agttgcctcctttgatttcc 37408348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 44331553 - 44331470
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaa 84  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44331553 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaa 44331470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 53921663 - 53921782
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||| | ||||||||| ||| |||||||||||| |||||||| ||    
T  53921663 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtttttacaatgttttccaacccaagaaaaccctaatcaaagactctcaaccctaa 53921762  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||| ||||||||||    
T  53921763 agttacctcatttgatttcc 53921782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 32891111 - 32890997
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||| | ||||||||||||| | |||||| |||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||    
T  32891111 tctcaccgaagaacaagacactcaatgatttttactcacccaaggtgtttacaatgtttcccaccccaagagaaccctaatcaaagaccctcaaccctaa 32891012  T
Q  101 agttctctcctttga 115  Q
    ||||  |||||||||    
T  32891011 agttacctcctttga 32890997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 9666627 - 9666747
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaactctaatcaaagaccctcaacccga 99  Q
    |||||| |||||||||||||||| | |||||||||||||||||||||||||| ||||||||| |||  |||||||| ||||||||||||||||||||| |    
T  9666627 tctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaactgaagagaaccctaatcaaagaccctcaacccta 9666726  T
Q  100 aagttctctcctttgatttcc 120  Q
    |||||  ||| ||||||||||    
T  9666727 aagttacctcatttgatttcc 9666747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 26386641 - 26386760
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||||||||| || |||||  ||||||| |||| ||||||||||||||||||||| |||||||| ||    
T  26386641 tctcacaaatgaacaagacactcaatgattttcactcacccaaagtatttaccctgtttcccaacctaagagaactctaatcaaagactctcaaccctaa 26386740  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  26386741 agttacctcctttgatttcc 26386760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 32744613 - 32744705
Alignment:
Q  27 gattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    |||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  32744613 gattttcactcacc-aatgtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcc 32744705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 9636287 - 9636406
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagaga-actctaatcaaagaccctcaacccga 99  Q
    |||||||||||| |||||||||| | |||||||||||| |||||||||||||||| ||||| ||||||||||| |||||||||||||||||| ||||| |    
T  9636287 tctcaccaatgaccaagacactcaatgattttcactca-ccaaggtgtttacaatatttcccaacccaagagagactctaatcaaagaccctaaacccta 9636385  T
Q  100 aagttctctcctttgatttcc 120  Q
    |||||   |||||||||||||    
T  9636386 aagtttcttcctttgatttcc 9636406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 23198099 - 23198194
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagag-aactctaatcaaagaccctcaaccc 97  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  23198099 tctcaccaa-gaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccc 23198194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 23200298 - 23200393
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagag-aactctaatcaaagaccctcaaccc 97  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  23200298 tctcaccaa-gaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccc 23200393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 23392070 - 23392183
Alignment:
Q  2 ctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaacccgaa 100  Q
    |||||||||||| ||||||||  | ||||||||||||||||||||||||||||||||||| |||||||||||| |||    ||||||| |||||||| ||    
T  23392070 ctcaccaatgaaaaagacactaaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaa 23392169  T
Q  101 agttctctcctttg 114  Q
    | ||||||||||||    
T  23392170 atttctctcctttg 23392183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 23410491 - 23410603
Alignment:
Q  3 tcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaacccgaaa 101  Q
    |||| |||||||||||||||| | ||||||||||||| ||||||||||||||||||| | |||||||||||| |||    ||||||| |||||||| |||    
T  23410491 tcactaatgaacaagacactcaatgattttcactcactcaaggtgtttacaatgttttccaacccaagagaacctcactacaaagacactcaaccctaaa 23410590  T
Q  102 gttctctcctttg 114  Q
    |||||||||||||    
T  23410591 gttctctcctttg 23410603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29196547 - 29196622
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaac 75  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  29196547 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaac 29196622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 44700638 - 44700713
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaac 75  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  44700638 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaac 44700713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 31314453 - 31314379
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    ||||||| ||||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  31314453 tctcacctatgaacaagacactcaatgattttcactcacccaaagtgtttacaatgtttcccaacccaagagaac 31314379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4569960 - 4569906
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||| |||||| |||||| | |||||||||||||||||||||||||||||    
T  4569960 tctcaccaaagaacaaaacactcaatgattttcactcacccaaggtgtttacaat 4569906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5434038 - 5434091
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  5434038 tctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttacaat 5434091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43401962 - 43402015
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  43401962 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 43402015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 54593712 - 54593659
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  54593712 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 54593659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 2075219 - 2075292
Alignment:
Q  3 tcaccaatgaacaagacactcgacgattttcactcacccaaggtgttta-caatgtttcctaacccaagagaact 76  Q
    ||||||||||||||||||||| | ||||||||||||  |||||||||||  ||||||||| ||||||||| ||||    
T  2075219 tcaccaatgaacaagacactcaatgattttcactca-gcaaggtgtttataaatgtttcccaacccaagataact 2075292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6095759 - 6095812
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||| ||||||||| | ||||||||||| |||||||||||||||||    
T  6095759 tctcaccaatgaataagacactc-atgattttcactctcccaaggtgtttacaat 6095812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31340361 - 31340414
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||||||||||||| |||||| | ||||||||||| |||||||||||||||||    
T  31340361 tctcaccaatgaacaaaacactc-atgattttcactctcccaaggtgtttacaat 31340414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41819683 - 41819737
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||||||||||||||||||||    |||||||||| |||||||||||||||||    
T  41819683 tctcaccaatgaacaagacactcatgaattttcactctcccaaggtgtttacaat 41819737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43403905 - 43403958
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| ||||| |||||||||||    
T  43403905 tctcaccaatgaacaagacactc-atgattttcactctcccaaagtgtttacaat 43403958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 46173370 - 46173321
Alignment:
Q  5 accaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  46173370 accaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 46173321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 3323548 - 3323511
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| |||||||||||||    
T  3323548 acccaaggtgtttacaatgtttcccaacccaagagaac 3323511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 5373233 - 5373114
Alignment:
Q  7 caatgaacaagacactcgacgattttcactcaccca-------aggtgtttac-aatgtttcctaacccaagagaactctaatcaaagaccctcaacccg 98  Q
    ||||||||||||||||| | ||||||| ||||||||       |||||||||| ||||||||| |||||||||||||  | | ||||||| |||||||      
T  5373233 caatgaacaagacactcaatgattttccctcacccacccaataaggtgtttaccaatgtttcccaacccaagagaaccttcaccaaagactctcaacctt 5373134  T
Q  99 aaagttctctcctttgattt 118  Q
    ||||||  ||||||||||||    
T  5373133 aaagttacctcctttgattt 5373114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 27986313 - 27986236
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga-actctaatcaaagaccctcaacccgaaagttctctcctttg 114  Q
    |||||||||||||||||||||||| |||||||||||  |||    ||||||| |||||||| ||||||| ||||||||    
T  27986313 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttccctcctttg 27986236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 801067 - 800987
Alignment:
Q  41 caaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    |||||||||| | |||||||| |||||||||||| |||||||||||||| || ||||| | ||||   |||||||||||||    
T  801067 caaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagtttcttcctttgatttcc 800987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 24695024 - 24694988
Alignment:
Q  37 cacccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    ||||||||||||||||||||||||| |||||||||||    
T  24695024 cacccaaggtgtttacaatgtttcccaacccaagaga 24694988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 36018858 - 36018806
Alignment:
Q  3 tcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||| ||||||   |||||||||| |||||||||||||||||    
T  36018858 tcaccaatgaacaagtcactcgttaattttcactctcccaaggtgtttacaat 36018806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 39032411 - 39032335
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctctcctttg 114  Q
    |||||||||||||||||||||| | ||||||||||| |||    ||||||| |||||||| ||||||  ||||||||    
T  39032411 acccaaggtgtttacaatgtttaccaacccaagagatctcactacaaagacactcaaccctaaagttacctcctttg 39032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 16264578 - 16264613
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  16264578 acccaaggtgtttacaatgtttcccaacccaagaga 16264613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 26299217 - 26299252
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  26299217 acccaaggtgtttacaatgtttcccaacccaagaga 26299252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 26928456 - 26928421
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  26928456 acccaaggtgtttacaatgtttcccaacccaagaga 26928421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 29196637 - 29196680
Alignment:
Q  77 ctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||    
T  29196637 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcc 29196680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 36029322 - 36029357
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  36029322 acccaaggtgtttacaatgtttcccaacccaagaga 36029357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 40592639 - 40592604
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  40592639 acccaaggtgtttacaatgtttcccaacccaagaga 40592604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 46493921 - 46493843
Alignment:
Q  176 aaccatccacattgactttgatatagccaatcatatggttggtgccaagaaacatgaggaaggataggatgatcctcatg 255  Q
    ||||||||||| ||||||||||||| || |||| | ||| |||||||| |||||||| |||||| | || ||||||||||    
T  46493921 aaccatccacactgactttgatataacc-atcagagggtgggtgccaacaaacatgatgaaggacatgacgatcctcatg 46493843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 46860482 - 46860427
Alignment:
Q  1 tctcaccaatgaacaagacactcgacga-ttttcactcacccaaggtgtttacaat 55  Q
    |||||||||||||||||||||||   || ||||||||| |||||||||||||||||    
T  46860482 tctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 46860427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 47923761 - 47923726
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  47923761 acccaaggtgtttacaatgtttcccaacccaagaga 47923726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30236133 - 30236080
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||| ||||||||||||||||| | ||||||||||  |||||||||||||||||    
T  30236133 tctcatcaatgaacaagacactc-atgattttcactatcccaaggtgtttacaat 30236080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 49199630 - 49199683
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||| ||||||||||||| | ||||||||||| ||||| |||||||||||    
T  49199630 tctcaccaacgaacaagacactc-atgattttcactctcccaaagtgtttacaat 49199683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 6794572 - 6794535
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  6794572 acccaaggtgtttacaatgtttcccaactcaagagaac 6794535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 8126859 - 8126892
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaaga 71  Q
    |||||||||||||||||||||||| |||||||||    
T  8126859 acccaaggtgtttacaatgtttcccaacccaaga 8126892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 35138874 - 35138915
Alignment:
Q  9 atgaacaagacactcgacgattttcactcacccaaggtgttt 50  Q
    ||||||||||||||| | ||||||||||| ||||||||||||    
T  35138874 atgaacaagacactcaatgattttcactctcccaaggtgttt 35138915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 3328214 - 3328178
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaa 74  Q
    |||||||||||||||||||||| | ||||||||||||    
T  3328214 acccaaggtgtttacaatgttttccaacccaagagaa 3328178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 21711454 - 21711486
Alignment:
Q  41 caaggtgtttacaatgtttcctaacccaagaga 73  Q
    ||||||||||||||||||||| |||||||||||    
T  21711454 caaggtgtttacaatgtttcccaacccaagaga 21711486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 27038279 - 27038315
Alignment:
Q  37 cacccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||||  ||||||||||    
T  27038279 cacccaaggtgtttacaatgtttccctacccaagaga 27038315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 4e-47; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 43036431 - 43036312
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  43036431 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 43036332  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  43036331 agttacctcctttgatttcc 43036312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4731666 - 4731549
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  4731666 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 4731567  T
Q  101 agttctctcctttgattt 118  Q
    ||||  ||||||||||||    
T  4731566 agttacctcctttgattt 4731549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 6598980 - 6598861
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||  | ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  6598980 tctcacaaatgaacaagacacttaatgattttcactcactcaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 6598881  T
Q  101 agttctctcctttgatttcc 120  Q
    |||| |||||||||||||||    
T  6598880 agttatctcctttgatttcc 6598861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 6674433 - 6674314
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||  | ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  6674433 tctcacaaatgaacaagacacttaatgattttcactcactcaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 6674334  T
Q  101 agttctctcctttgatttcc 120  Q
    |||| |||||||||||||||    
T  6674333 agttatctcctttgatttcc 6674314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 15212794 - 15212675
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  15212794 tctcaccaatgaacaagacattcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 15212695  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||| ||||||||||    
T  15212694 agttacctcatttgatttcc 15212675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 33352158 - 33352039
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  33352158 tctcaccaatgaacaagacactcaatgattttcaatcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 33352059  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  || |||||||||||    
T  33352058 agttaccttctttgatttcc 33352039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 5689272 - 5689160
Alignment:
Q  8 aatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctc 107  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| |||||| ||    
T  5689272 aatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttccaaactcaagagaaccctaatcaaagaccctcaaccctaaagttatc 5689173  T
Q  108 tcctttgatttcc 120  Q
    |||||||||||||    
T  5689172 tcctttgatttcc 5689160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 18106238 - 18106382
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||| | || ||    
T  18106238 tctcaccgatgaacaagacactcaacaattttcactcacccaaggtgtttacaatgtttcccaacccaagagaaatctaattaaagaccctctatcctaa 18106337  T
Q  101 agttctctcctttgattt-ccgagttttccagataatcaaaaacc 144  Q
    |||||||||||||||||| || |||| ||  ||||||||||||||    
T  18106338 agttctctcctttgatttcccaagttctcgtgataatcaaaaacc 18106382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 27811286 - 27811167
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||| ||    
T  27811286 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgttttccaacctaagagaactctaatcaaagaccctcaaccctaa 27811187  T
Q  101 agttctctcctttgatttcc 120  Q
    | ||  ||||||||||||||    
T  27811186 atttacctcctttgatttcc 27811167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 44303861 - 44303744
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  44303861 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaa 44303763  T
Q  101 agttctctcctttgatttc 119  Q
    |||| | ||||||||||||    
T  44303762 agttgtttcctttgatttc 44303744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 12702799 - 12702917
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||  | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  12702799 tctcaccaatgaacaagacacttaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 12702897  T
Q  101 agttctctcctttgatttcc 120  Q
    | ||  ||||||||||||||    
T  12702898 atttacctcctttgatttcc 12702917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 17982660 - 17982542
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  17982660 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaa 17982562  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  17982561 agttgcttcctttgatttcc 17982542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 31218264 - 31218146
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  31218264 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaa 31218166  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  31218165 agttgcttcctttgatttcc 31218146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 42498201 - 42498083
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||||||||| ||    
T  42498201 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaacgtttcccaacccaagagaactttaatcaaagaccctcaaccctaa 42498103  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  42498102 agttacctcctttgatttcc 42498083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 41365016 - 41365125
Alignment:
Q  10 tgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctctc 109  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||  |||    
T  41365016 tgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaaagttacctc 41365115  T
Q  110 ctttgatttc 119  Q
     |||||||||    
T  41365116 atttgatttc 41365125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 3303830 - 3303949
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||| ||||||| |||| | ||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  ||    
T  3303830 tctcaccaataaacaagatactcaatgattttcactcactcaaggtgtttacaatgtttcccaacccaagagaaccctaatcaaagaccctcaaccgtaa 3303929  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  3303930 agttacctcctttgatttcc 3303949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 30143343 - 30143231
Alignment:
Q  6 ccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttc 105  Q
    ||||||||||||||||   | ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||     
T  30143343 ccaatgaacaagacaca--atgattttcactcacccaatgtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagtta 30143246  T
Q  106 tctcctttgatttcc 120  Q
     ||||||||||||||    
T  30143245 cctcctttgatttcc 30143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 34254490 - 34254607
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||    
T  34254490 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtctcc-aacccaagagaactctaatcaaagaccctaaaccctaa 34254587  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  34254588 agttgcctcctttgatttcc 34254607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 1746379 - 1746497
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| |||||| ||||| ||    
T  1746379 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaaccaaagagaactctaatcaaggaccctaaaccctaa 1746477  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  1746478 agttgcttcctttgatttcc 1746497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 19945521 - 19945639
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||| || ||||| ||    
T  19945521 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccgacccaagagaactctaatcaaagactctaaaccctaa 19945619  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  19945620 agttgcttcctttgatttcc 19945639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 34256666 - 34256783
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||    
T  34256666 tctcaccaatgaacaagacactcaatgattttcacacacc-aaggtgtttacaatgtttcc-aacccaagataactctaatcaaagaccctaaaccctaa 34256763  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  34256764 agttgcctcctttgatttcc 34256783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 1292623 - 1292740
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||| ||||||||||||| |  |||||||||||||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||| ||    
T  1292623 tctcaccaaagaacaagacactcaataattttcactcacccaaggtgttcacagtgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaa 1292722  T
Q  101 agttctctcctttgattt 118  Q
    ||||  ||| ||||||||    
T  1292723 agttacctcatttgattt 1292740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 1345531 - 1345648
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| ||||||||||||| || | ||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||||||||| ||    
T  1345531 tctcacaaatgaacaagacattcaatgattttcactcacccaaggtgtttacaatatttcccaactcaagagaactctaatcaaaaaccctcaaccctaa 1345630  T
Q  101 agttctctcctttgattt 118  Q
    ||||   |||||||||||    
T  1345631 agttacatcctttgattt 1345648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 4743363 - 4743459
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaaccc 97  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||    
T  4743363 tctcaccaatgaacaagacactcaatgattttcgctcacccaaggtgtttacaatgtttcccaacccaagagattcctaatcaaagaccctcaaccc 4743459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 4162508 - 4162405
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||| | ||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||| ||    
T  4162508 tctcactaatgaacaagacactcaatgattttcactcgctcaaggtgtttacaatgttttccaacccaagagaaccctaatcaaagaccctcaaccctaa 4162409  T
Q  101 agtt 104  Q
    ||||    
T  4162408 agtt 4162405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 10929807 - 10929690
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||| ||||||||||||| | |||||||||| | ||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||| ||    
T  10929807 tctcaccaaagaacaagacactcaatgattttcactaatccaaggtgtttacaatg-ttcccaacccaagagaactctaatcaaagaccc-caaccctaa 10929710  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  10929709 agttacctcctttgatttcc 10929690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 18141829 - 18141711
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaactctaatcaaagaccctcaacccga 99  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||| |||| |||||||| ||||||||||||||||||||| |    
T  18141829 tctcaccaatgaacaagacactcaatgattttcactcgcccaaggtgtttacaaatgtttcccaacctaagagaaccctaatcaaagaccctcaacccta 18141730  T
Q  100 aagttctctcctttgattt 118  Q
    || ||  |||||| |||||    
T  18141729 aaattacctccttcgattt 18141711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 41366783 - 41366877
Alignment:
Q  10 tgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagtt 104  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||||| ||||||    
T  41366783 tgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaatctaagagaactctaatcaaagatcctcaaccctaaagtt 41366877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 4733785 - 4733698
Alignment:
Q  33 cactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||  ||| ||||||||||    
T  4733785 cactcatccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcttttgatttcc 4733698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 10015119 - 10015037
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||   |||||||||||||    
T  10015119 acccaacgtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcc 10015037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 40321088 - 40320956
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaa-------------cccaagagaactctaatcaaaga 87  Q
    ||||||| ||||||||||||||| | |||||||| |||| ||||||||||||||||||||| ||             | ||||||||| |||||||||||    
T  40321088 tctcacctatgaacaagacactcaatgattttcagtcactcaaggtgtttacaatgtttcccaactcaagagaacccctcaagagaaccctaatcaaaga 40320989  T
Q  88 ccctcaacccgaaagttctctcctttgatttcc 120  Q
    |||||||||||||||||  ||||||||||||||    
T  40320988 ccctcaacccgaaagttacctcctttgatttcc 40320956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8965851 - 8965904
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaa 54  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  8965851 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 8965904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30291614 - 30291545
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaa 69  Q
    ||||||||||||||||||||||| | |||||||| ||||||||||||||||| ||||||||| |||||||    
T  30291614 tctcaccaatgaacaagacactcaatgattttcaatcacccaaggtgtttacaaatgtttcccaacccaa 30291545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8153772 - 8153650
Alignment:
Q  1 tctcaccaatgaacaagacac--tcgacgattttcactcacccaaggtgtttacaa-tgtttcctaacccaagagaactctaatcaaagaccctcaaccc 97  Q
    ||||||||||||||| |||||  || | |||||||||||| ||||||||| ||||| ||||||| ||||||| |||||  ||||||||||| |||||||     
T  8153772 tctcaccaatgaacatgacacactcaatgattttcactcatccaaggtgtatacaaatgtttcccaacccaaaagaacattaatcaaagactctcaacct 8153673  T
Q  98 gaaagttctctcctttgatttcc 120  Q
     ||| ||  ||||||||||||||    
T  8153672 taaaattacctcctttgatttcc 8153650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 9765753 - 9765642
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacc--caagagaactctaatcaaagaccctcaacccg 98  Q
    ||||||||||||||||||||||| |    |||||||||||||||||||||||||||||||| ||||  |||||||||   | |||||||| ||||||||     
T  9765753 tctcaccaatgaacaagacactcaa----tttcactcacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactcaaagacactcaaccct 9765658  T
Q  99 aaagttctctcctttg 114  Q
     |||||  ||||||||    
T  9765657 caagttacctcctttg 9765642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19491859 - 19491924
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaaccc 67  Q
    ||||||||||||||||||||||| |  ||||||||||||||||| ||||||| |||||||| |||||    
T  19491859 tctcaccaatgaacaagacactcaat-attttcactcacccaagatgtttacgatgtttcccaaccc 19491924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 3051349 - 3051425
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaactctaat-caaagaccctcaacccgaaagttctctccttt 113  Q
    ||||||| |||||||||||||||| ||| ||||||||| | | | ||||||| |||||||| |||||||||||||||    
T  3051349 acccaagatgtttacaatgtttcccaactcaagagaaccccactacaaagacactcaaccctaaagttctctccttt 3051425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 3318741 - 3318813
Alignment:
Q  34 actcacccaaggtgtttacaa-tgtttcctaacccaagagaa-ctctaatcaaagaccctcaacccgaaagtt 104  Q
    ||||||||||||||||| ||| |||||||||||||||||||| |||  | |||||||||||||||| ||||||    
T  3318741 actcacccaaggtgttttcaaatgtttcctaacccaagagaacctcccaccaaagaccctcaaccctaaagtt 3318813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18655408 - 18655345
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaa-tgtttcctaa 64  Q
    |||||||||||||||| |||||| | ||||||||||| |||||||||||||||| ||||||||||    
T  18655408 tctcaccaatgaacaaaacactc-atgattttcactctcccaaggtgtttacaattgtttcctaa 18655345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4283532 - 4283479
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| || ||||||||||||||    
T  4283532 tctcaccaatgaacaagacactc-atgattttcactctcctaaggtgtttacaat 4283479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40221753 - 40221700
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||| ||||||||||||| | ||||||||||| |||||||||||||||||    
T  40221753 tctcaccaaagaacaagacactc-atgattttcactctcccaaggtgtttacaat 40221700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42435151 - 42435204
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| ||||| |||||||||||    
T  42435151 tctcaccaatgaacaagacactc-atgattttcactctcccaaagtgtttacaat 42435204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 4696476 - 4696399
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga-actctaatcaaagaccctcaacccgaaagttctctcctttg 114  Q
    |||||||||||||||||||||||| |||||||||||  |||    ||||||| |||||||| |||||| |||||||||    
T  4696476 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttatctcctttg 4696399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 7412569 - 7412646
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga-actctaatcaaagaccctcaacccgaaagttctctcctttg 114  Q
    |||||||||||||||||||||||| |||||||||||  ||||   ||||||| |||||||| ||||||  ||||||||    
T  7412569 acccaaggtgtttacaatgtttcccaacccaagagatcctctctacaaagacactcaaccctaaagttacctcctttg 7412646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 29796512 - 29796601
Alignment:
Q  31 ttcactcacccaaggtgtttacaa-tgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctctcctttgatttc 119  Q
    ||||||| |||||| | ||||||| ||||||| ||||||||||||| ||   |||||| ||||||||| ||||||  |||||||||||||    
T  29796512 ttcactcgcccaagatatttacaaatgtttcccaacccaagagaaccctcgccaaagatcctcaaccctaaagttacctcctttgatttc 29796601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 4456257 - 4456292
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  4456257 acccaaggtgtttacaatgtttcccaacccaagaga 4456292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 11383987 - 11383941
Alignment:
Q  8 aatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||    
T  11383987 aatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 11383941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 19948533 - 19948600
Alignment:
Q  53 aatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    ||||||||| ||| ||| |||||||||||||||||| || ||||| ||||||   |||||||||||||    
T  19948533 aatgtttcccaactcaaaagaactctaatcaaagactctaaaccctaaagttgcttcctttgatttcc 19948600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 30291534 - 30291483
Alignment:
Q  67 caagagaactctaatcaaagaccctcaacccgaaagttctctcctttgattt 118  Q
    ||||||||| ||||||||||||| ||||||| ||||||  ||||||||||||    
T  30291534 caagagaaccctaatcaaagaccatcaaccctaaagttacctcctttgattt 30291483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44353801 - 44353747
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||| ||||||||||| |||| | |||||| |||||||||| |||||||||||    
T  44353801 tctcacaaatgaacaagatactcaatgatttttactcacccaatgtgtttacaat 44353747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 2627711 - 2627654
Alignment:
Q  41 caaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaaccc 97  Q
    |||||||||| | |||||||| |||||||||||| |||||||||||||| || |||||    
T  2627711 caaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccc 2627654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 7493041 - 7493004
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| || ||||||||||    
T  7493041 acccaaggtgtttacaatgtttcccaatccaagagaac 7493004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3772200 - 3772160
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcaccc 41  Q
    ||||||||||||||||||||||| |  ||||||||||||||    
T  3772200 tctcaccaatgaacaagacactcaatcattttcactcaccc 3772160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 4e-47; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 47676296 - 47676415
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  47676296 tctcaccaatgaacaagacactcattgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 47676395  T
Q  101 agttctctcctttgatttcc 120  Q
    |||| |||||||||||||||    
T  47676396 agttatctcctttgatttcc 47676415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 43864252 - 43864133
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||    
T  43864252 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaa 43864153  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  43864152 agttacctcctttgatttcc 43864133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 48491587 - 48491470
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  48491587 tctcaccaatgaacaagacactcaatgattttcactcacccaaagtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 48491488  T
Q  101 agttctctcctttgattt 118  Q
    ||||  ||||||||||||    
T  48491487 agttacctcctttgattt 48491470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 14069993 - 14070112
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||| ||    
T  14069993 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgttacccaacccaagagaactctaatcaaagaccctcagccctaa 14070092  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  14070093 agttacctcctttgatttcc 14070112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 14380021 - 14380140
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||| ||    
T  14380021 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgttacccaacccaagagaactctaatcaaagaccctcagccctaa 14380120  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  14380121 agttacctcctttgatttcc 14380140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 29991062 - 29990944
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  29991062 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaa 29990964  T
Q  101 agttctctcctttgatttcc 120  Q
    |||| |||||||||||||||    
T  29990963 agttgtctcctttgatttcc 29990944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 38671382 - 38671501
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  38671382 tctcacaaatgaacaagacactcaatgattttcgctcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 38671481  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  38671482 agttacctcctttgatttcc 38671501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 31733129 - 31733247
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||    
T  31733129 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaactctaa 31733228  T
Q  101 agttctctcctttgatttc 119  Q
    ||||  ||| |||||||||    
T  31733229 agttacctcttttgatttc 31733247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 24526059 - 24526176
Alignment:
Q  3 tcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaag 102  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||| ||||    
T  24526059 tcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacctaagagaaccataatcaaagaccctcaaccctaaag 24526158  T
Q  103 ttctctcctttgatttcc 120  Q
    || |||||||||||||||    
T  24526159 ttatctcctttgatttcc 24526176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1113665 - 1113546
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  1113665 tctcacaaatgaacaagacactcaatgattttcactcacccaagttgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 1113566  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  1113565 agttacttcctttgatttcc 1113546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 2761462 - 2761581
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | | ||||||| ||    
T  2761462 tctcaccaatgaacaagacactcgatgattttcactcacccaatgtgtttacaatgtttcccaacccaagagaactctaatcaaatatcatcaaccctaa 2761561  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  2761562 agttacctcctttgatttcc 2761581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 4586169 - 4586050
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||    
T  4586169 tctcaccaatgaacaagacactcaatgatttacactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagagcctcaaccctaa 4586070  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  4586069 agttacatcctttgatttcc 4586050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 18126652 - 18126533
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||||||||| |||||| | |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||| ||    
T  18126652 tctcaccaatgaacaaaacactcaatgattttcactcacccaagttgtttacaatgtttcccaacccatgagaactctaatcaaagaccctcaaccctaa 18126553  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  18126552 agttacctcctttgatttcc 18126533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 48489439 - 48489320
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||||||||||||| |  | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||    
T  48489439 tctcaccaatgaacaagacatttaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccatcaaccctaa 48489340  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  48489339 agttacctcctttgatttcc 48489320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24514921 - 24515039
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  24514921 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaa 24515019  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  24515020 agttgcttcctttgatttcc 24515039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 30024892 - 30025011
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||   |||| |||||||||||||||||||||||||||||| ||    
T  30024892 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaacgtttttcaacctaagagaactctaatcaaagaccctcaaccctaa 30024991  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  30024992 agttacctcctttgatttcc 30025011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 31518803 - 31518684
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | ||||||| |||||  |||||||||||||| ||||| ||    
T  31518803 tctcaccaatgaacaagacactcgatgattttcactcacccaaggtgtttacgatgttttccaacccaaaagaaccataatcaaagacccttaaccctaa 31518704  T
Q  101 agttctctcctttgatttcc 120  Q
    |||| |||||||||||||||    
T  31518703 agttatctcctttgatttcc 31518684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 47674103 - 47674222
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||   |    
T  47674103 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgttttccaacccaagagaactctaatcaaagaccttcaaccttga 47674202  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  47674203 agttacctcctttgatttcc 47674222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 4178782 - 4178665
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  4178782 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaa 4178684  T
Q  101 agttctctcctttgatttc 119  Q
    ||||   ||||||||||||    
T  4178683 agttgcttcctttgatttc 4178665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 26417324 - 26417206
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||| | | ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||    
T  26417324 tctcaccaatgaacaagacactcaatgattttcacccgctcaaggtgtttacaatgtttcccaatccaagagaactctaatcaaagaccctcaaccctaa 26417225  T
Q  101 agttctctcctttgatttc 119  Q
    ||||  |||||||||||||    
T  26417224 agttacctcctttgatttc 26417206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 4538700 - 4538819
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||||  ||    
T  4538700 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatttttcccaacccaagagaattctaatcaaagactctcaaccttaa 4538799  T
Q  101 agttctctcctttgatttcc 120  Q
    | ||  ||||||||||||||    
T  4538800 aattacctcctttgatttcc 4538819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 23555047 - 23554929
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||  |    
T  23555047 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaactcaagagaactctaatcaaagaccttcaaccctga 23554949  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  23554948 agttacctcctttgatttcc 23554929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 19502185 - 19502068
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||| |||||||||||||| | |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  19502185 tctcaccactgaacaagacactcaatgattctcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 19502087  T
Q  101 agttctctcctttgatttc 119  Q
    ||||  ||| |||||||||    
T  19502086 agttacctcatttgatttc 19502068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 31105553 - 31105671
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||  | ||||||| |||| |||||||||||||||||||| ||    
T  31105553 tctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttctcaccccaagataactataatcaaagaccctcaaccctaa 31105652  T
Q  101 agttctctcctttgatttc 119  Q
    ||||  |||||||||||||    
T  31105653 agttacctcctttgatttc 31105671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 35853922 - 35853820
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||| ||    
T  35853922 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactcaaatcaaagaccctaaaccctaa 35853824  T
Q  101 agtt 104  Q
    ||||    
T  35853823 agtt 35853820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 41649170 - 41649288
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| ||||| ||    
T  41649170 tctcacaaatgaacaagacactcaatgattttcacttacccaaggtgtttacaatgtttcccaacccaagagaactctaataaaaga-ccttaaccctaa 41649268  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  41649269 agttaactcctttgatttcc 41649288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 25615858 - 25615752
Alignment:
Q  14 caagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctctccttt 113  Q
    |||||||||| | ||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||  ||||||  |||||||    
T  25615858 caagacactcaatgattttctctcacccaaggtgtttacaatgttttccaacccaagagaactctaatcaaagacccttaaccttaaagttaactccttt 25615759  T
Q  114 gatttcc 120  Q
    |||||||    
T  25615758 gatttcc 25615752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 48408810 - 48408714
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagag-aactctaatcaaagaccctcaaccc 97  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  48408810 tctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccc 48408714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 496143 - 496262
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| ||| ||||| |||||  | |||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||  ||    
T  496143 tctcacaaattaacaaaacactaaatgattttcactcacccaaggtttttacaatgtttcccaatccaagagaactctaatcaaagaccctcaaccttaa 496242  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||| ||||||||||    
T  496243 agttacctcatttgatttcc 496262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 27347825 - 27347745
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaat 81  Q
    ||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  27347825 tctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttacaatgtttcccaacctaagagaactctaat 27347745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 36574675 - 36574794
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaa-tgtttcctaacccaagagaactctaatcaaagaccctcaacccga 99  Q
    |||| ||||| ||||||||||||||  ||||||||||||| ||||||||||||| ||||| | ||||||||||||| || |||||||||| ||||||| |    
T  36574675 tctctccaataaacaagacactcgataattttcactcacctaaggtgtttacaaatgttttccaacccaagagaaccctcatcaaagaccgtcaacccta 36574774  T
Q  100 aagttctctcctttgatttc 119  Q
    |||||  |||||||||||||    
T  36574775 aagttacctcctttgatttc 36574794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 4253691 - 4253809
Alignment:
Q  3 tcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaa 101  Q
    |||||||||||||||| |||| | |||||||||||||| ||||||||||| ||||||| | ||||||||||||| || | |||| ||||||||||| |||    
T  4253691 tcaccaatgaacaagaaactcaatgattttcactcacctaaggtgtttacaaatgttttccaacccaagagaaccctcaccaaataccctcaaccctaaa 4253790  T
Q  102 gttctctcctttgatttcc 120  Q
    |||  ||||||||||||||    
T  4253791 gttacctcctttgatttcc 4253809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 8153350 - 8153276
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    ||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  8153350 tctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttacaatgtttcccaacccaagagaac 8153276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 36146568 - 36146643
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaac 75  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  36146568 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaac 36146643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 12098023 - 12098093
Alignment:
Q  5 accaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| |||||||||||||    
T  12098023 accaatgaacaagacactcaatgattttcactcacccaagatgtttacaatgtttcccaacccaagagaac 12098093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 41317594 - 41317668
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||| |||| | |||||||||||| |||||||||||||||||||||| |||||||||||||    
T  41317594 tctcaccaatgaacaagagactcaatgattttcactcatccaaggtgtttacaatgtttcccaacccaagagaac 41317668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 23343983 - 23343863
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtg-tttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccga 99  Q
    |||||||||||||| ||||| || | ||||||||||||||||||||| |||  ||||||||| |||| |||||||| |||||||||||| ||| |||| |    
T  23343983 tctcaccaatgaactagacattcaatgattttcactcacccaaggtgttttgaaatgtttccaaacctaagagaaccctaatcaaagactctcgacccta 23343884  T
Q  100 aagttctctcctttgatttcc 120  Q
    |||||   |||||||||||||    
T  23343883 aagttacatcctttgatttcc 23343863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 39731371 - 39731288
Alignment:
Q  14 caagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaaccc 97  Q
    |||||||||| | |||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  39731371 caagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaagctctaatcaaagaccctaaaccc 39731288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 23565224 - 23565316
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaactctaatcaaagaccctcaacc 96  Q
    ||||||||||||||||||||||  | |   |||||||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||||| ||||    
T  23565224 tctcaccaatgaacaagacacttcatg---ttcactcacccaaggtgtttacaaatgttttctaaaccaagagaac-ctaatcaaagacccttaacc 23565316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 25767124 - 25767210
Alignment:
Q  7 caatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagag-aactctaatcaaagaccctcaaccc 97  Q
    ||||||||||||||||| | |||||||||||| |||||||||||||||||||||    || ||||| ||||||||||||||||||| |||||    
T  25767124 caatgaacaagacactcaatgattttcactca-ccaaggtgtttacaatgtttc----ccaaagagaaactctaatcaaagaccctaaaccc 25767210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 6570561 - 6570484
Alignment:
Q  42 aaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctctcctttgatttc 119  Q
    |||||||||||||||||||| | ||||||||||| ||| |||||||| ||||| || ||||||  |||||||||||||    
T  6570561 aaggtgtttacaatgtttcccaccccaagagaaccctagtcaaagacactcaatcctaaagttacctcctttgatttc 6570484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 2361132 - 2361185
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  2361132 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 2361185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34310876 - 34310929
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  34310876 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 34310929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 5514176 - 5514243
Alignment:
Q  8 aatgaacaagacactcgacgattttcactcacccaaggtgtttacaa-tgtttcctaacccaagagaa 74  Q
    ||||||||||| |||| | |||||||||||| | ||||||||||||| ||||||| ||||||||||||    
T  5514176 aatgaacaagaaactcaatgattttcactcatcgaaggtgtttacaagtgtttcccaacccaagagaa 5514243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4508866 - 4508919
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||||||| |||||||||||| | ||||||||||| |||||||||||||||||    
T  4508866 tctcaccaatcaacaagacactc-atgattttcactctcccaaggtgtttacaat 4508919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 9189875 - 9189797
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaactctaat-caaag-accctcaacccgaaagttctctcctttg 114  Q
    |||||||||||||||||||||||| |||||||||||||  || | ||||| || |||||||| |||||| |||||||||    
T  9189875 acccaaggtgtttacaatgtttcccaacccaagagaaccttactacaaagaacactcaaccctaaagttatctcctttg 9189797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 9185042 - 9185005
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| |||||||||||||    
T  9185042 acccaaggtgtttacaatgtttcccaacccaagagaac 9185005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 20284318 - 20284355
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| |||||||||||||    
T  20284318 acccaaggtgtttacaatgtttcccaacccaagagaac 20284355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 23402881 - 23402844
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| |||||||||||||    
T  23402881 acccaaggtgtttacaatgtttcccaacccaagagaac 23402844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 2580619 - 2580695
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctctcctttg 114  Q
    |||||||||||||||||||||| | |||||||||||||   |  ||||||| |||||||| ||||||  ||||||||    
T  2580619 acccaaggtgtttacaatgttttccaacccaagagaacctcacacaaagacactcaaccctaaagttacctcctttg 2580695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 2479565 - 2479600
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  2479565 acccaaggtgtttacaatgtttcccaacccaagaga 2479600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 12098108 - 12098151
Alignment:
Q  77 ctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||    
T  12098108 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcc 12098151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 21989137 - 21989172
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  21989137 acccaaggtgtttacaatgtttcccaacccaagaga 21989172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 30843392 - 30843467
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaac 75  Q
    |||| ||||||||||||| |||| | |||||| ||||| | ||||||||||| ||||||||  |||||||||||||    
T  30843392 tctctccaatgaacaagatactcaatgattttaactcatctaaggtgtttacaaatgtttctcaacccaagagaac 30843467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 41317683 - 41317726
Alignment:
Q  77 ctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||    
T  41317683 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcc 41317726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3259003 - 3258949
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||||||||||||||||||||    |||||||||  |||||||||||||||||    
T  3259003 tctcaccaatgaacaagacactcatgaattttcactttcccaaggtgtttacaat 3258949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4510708 - 4510761
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||||||| |||||| ||||| | ||||||||||| |||||||||||||||||    
T  4510708 tctcaccaatcaacaaggcactc-atgattttcactctcccaaggtgtttacaat 4510761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4512550 - 4512603
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||||||| |||||| ||||| | ||||||||||| |||||||||||||||||    
T  4512550 tctcaccaatcaacaaggcactc-atgattttcactctcccaaggtgtttacaat 4512603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 6431975 - 6431926
Alignment:
Q  5 accaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||| | ||||||||||| ||||| |||||||||||    
T  6431975 accaatgaacaagacactc-atgattttcactctcccaatgtgtttacaat 6431926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8359477 - 8359530
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||| |||||||||||||||||| | ||||||||||| | |||||||||||||||    
T  8359477 tctccccaatgaacaagacactc-atgattttcactctctcaaggtgtttacaat 8359530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 9235448 - 9235414
Alignment:
Q  40 ccaaggtgtttacaatgtttcctaacccaagagaa 74  Q
    |||||||||||||||||||||| ||||||||||||    
T  9235448 ccaaggtgtttacaatgtttcccaacccaagagaa 9235414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22269981 - 22269931
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgttta 51  Q
    |||||||||||||||||||||||    |||||||||| |||||||||||||    
T  22269981 tctcaccaatgaacaagacactcatgaattttcactctcccaaggtgttta 22269931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 44847991 - 44847958
Alignment:
Q  40 ccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||| |||||||||||    
T  44847991 ccaaggtgtttacaatgtttcccaacccaagaga 44847958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 2390288 - 2390237
Alignment:
Q  3 tcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||  | ||||||| ||| |||||||||||||||||    
T  2390288 tcaccaatgaacaagacactt-atgattttcgctctcccaaggtgtttacaat 2390237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 43504321 - 43504404
Alignment:
Q  14 caagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaaccc 97  Q
    |||||||||||| ||||||| |||   |||||||||| | |||||||| || ||||||||| |||||||||||||| || |||||    
T  43504321 caagacactcgatgattttctctc-ttcaaggtgtttcccatgtttcccaagccaagagaagctctaatcaaagactctaaaccc 43504404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 48599496 - 48599547
Alignment:
Q  3 tcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||||||||||||||| || | |||||||||||  ||||||||||||||||    
T  48599496 tcaccaatgaacaagacaatc-atgattttcactcctccaaggtgtttacaat 48599547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 4e-47; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 48143050 - 48142931
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  48143050 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 48142951  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  48142950 agttacctcctttgatttcc 48142931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 5429687 - 5429568
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  5429687 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 5429588  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  5429587 agttacttcctttgatttcc 5429568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 29999966 - 30000084
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  29999966 tctcaccaatgaacaagacactcaacgattttcactcacc-aaggtgtttacaatgtttccaaacccaagagaactctaatcaaagaccctaaaccctaa 30000064  T
Q  101 agttctctcctttgatttcc 120  Q
    |||| |||||||||||||||    
T  30000065 agttgtctcctttgatttcc 30000084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 47038569 - 47038688
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  47038569 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttataatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 47038668  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  47038669 agttaactcctttgatttcc 47038688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 52082817 - 52082936
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  52082817 tctcaccaatgaacaagacagtcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 52082916  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  52082917 agttacctcctttgatttcc 52082936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 52095522 - 52095641
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||    
T  52095522 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagtccctcaaccctaa 52095621  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  52095622 agttacctcctttgatttcc 52095641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 54200066 - 54200185
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  54200066 tctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 54200165  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  54200166 agttacctcctttgatttcc 54200185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 5871828 - 5871709
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||    
T  5871828 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccataaccctaa 5871729  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  5871728 agttacctcctttgatttcc 5871709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 12739710 - 12739828
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  12739710 tctcaccaatgaacaagacactcaatgatttccactcacctaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 12739809  T
Q  101 agttctctcctttgatttc 119  Q
    ||||  |||||||||||||    
T  12739810 agttacctcctttgatttc 12739828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 12747916 - 12748034
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  12747916 tctcaccaatgaacaagacactcaatgatttccactcacctaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 12748015  T
Q  101 agttctctcctttgatttc 119  Q
    ||||  |||||||||||||    
T  12748016 agttacctcctttgatttc 12748034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 13009591 - 13009710
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  13009591 tctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaa 13009690  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||| ||||||||||    
T  13009691 agttacctcatttgatttcc 13009710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 26175796 - 26175915
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||| | ||    
T  26175796 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaacagaactttaatcaaagaccctcaactctaa 26175895  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  26175896 agttacctcctttgatttcc 26175915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 29254502 - 29254383
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| ||||||| ||    
T  29254502 tctcaccaatgaacaagacactcaatgattttcattcacccaatgtgtttacaatgtttcccaacccaagagaactctactcaaagaccttcaaccctaa 29254403  T
Q  101 agttctctcctttgatttcc 120  Q
    |||| |||||||||||||||    
T  29254402 agttatctcctttgatttcc 29254383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 34570574 - 34570693
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  34570574 tctcaccaatgaacaagacactcaatgattttcactcacccaagatgttttcaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 34570673  T
Q  101 agttctctcctttgatttcc 120  Q
    || |  ||||||||||||||    
T  34570674 agctacctcctttgatttcc 34570693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 56178797 - 56178915
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||    
T  56178797 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccttcaaccctaa 56178895  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  56178896 agttacctcctttgatttcc 56178915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 37740633 - 37740515
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  37740633 tctcaccaatgaacaagacactcagtgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 37740535  T
Q  101 agttctctcctttgatttcc 120  Q
    | ||  ||||||||||||||    
T  37740534 acttacctcctttgatttcc 37740515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 9927618 - 9927736
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||| |||||||||   |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||    
T  9927618 tctcaccaatgaataagacactcagtgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaa 9927716  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  9927717 agttacctcctttgatttcc 9927736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 5370247 - 5370364
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| ||| |||||||||||||||| | |||||||||||| |||||||||||||| ||||| ||    
T  5370247 tctcaccaatgaacaagacactcaatgattttcactcaccaaag-tgtttacaatgtttcccagcccaagagaactataatcaaagaccctaaaccctaa 5370345  T
Q  101 agttctctcctttgatttc 119  Q
    |||| ||||||||||||||    
T  5370346 agttgtctcctttgatttc 5370364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 36994532 - 36994416
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||| || ||    
T  36994532 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttgccaaatcaagagaactctaatcaaagaccctcaa-ccaaa 36994434  T
Q  101 agttctctcctttgattt 118  Q
    ||||  ||||||||||||    
T  36994433 agttacctcctttgattt 36994416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 12745596 - 12745708
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||| | ||    
T  12745596 tctcgccaatgaacaagacactcaatgattttcactcacccaaggtgtttacattgtttcccaaaccaagagaactctaatcaaagaccctcaactctaa 12745695  T
Q  101 agttctctccttt 113  Q
    ||||  |||||||    
T  12745696 agttacctccttt 12745708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 24969120 - 24969000
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaa-tgtttcctaacccaagagaactctaatcaaagaccctcaacccga 99  Q
    ||||||||| ||||||||| ||| | |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||  |    
T  24969120 tctcaccaaagaacaagactctcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaactctaatcaaagaccgtcaacctta 24969021  T
Q  100 aagttctctcctttgatttcc 120  Q
    |||||  ||||||||||||||    
T  24969020 aagttacctcctttgatttcc 24969000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 52467515 - 52467631
Alignment:
Q  2 ctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||| ||    
T  52467515 ctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaaccctaatcaaagaccctcaaccctaa 52467614  T
Q  101 agttctctcctttgatt 117  Q
    | ||  |||||||||||    
T  52467615 aattacctcctttgatt 52467631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 31474158 - 31474062
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaaccc 97  Q
    ||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| |  ||||||||||  ||||||||||||||||||||    
T  31474158 tctcaccaatgaacaagacactcaatgattttcactcacccaaagtgtttacaatgtttcccactccaagagaaccttaatcaaagaccctcaaccc 31474062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 6542341 - 6542455
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaat--caaagaccctcaacccg 98  Q
    |||| |||||||||||||||||| |  |||||||||||||||||||||||||||||||||| ||||||||||||| || ||  ||||||| ||||||||     
T  6542341 tctccccaatgaacaagacactcaataattttcactcacccaaggtgtttacaatgtttcccaacccaagagaac-ctcattacaaagacactcaaccct 6542439  T
Q  99 aaagttctctcctttg 114  Q
    ||||||  ||||||||    
T  6542440 aaagttacctcctttg 6542455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 13992459 - 13992549
Alignment:
Q  14 caagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagaga-actctaatcaaagaccctcaacccgaaagtt 104  Q
    |||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||||    
T  13992459 caagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagagactctaatcaaagaccctaaaccctaaagtt 13992549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 36463549 - 36463623
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    ||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||| ||| |||||||||    
T  36463549 tctcaccaatgaacaagacactcaatgaatttcactcacccaaggtgtttacaatgtttcccaactcaagagaac 36463623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 48893802 - 48893868
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaaccc 67  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||    
T  48893802 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttccaaaccc 48893868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 51337072 - 51336998
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||| | |||||||||||||    
T  51337072 tctcaccaatgaacaggacactcaatgattttcactcacccaaggtgtttacaatgttttccaacccaagagaac 51336998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 4587964 - 4587892
Alignment:
Q  3 tcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    ||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  4587964 tcaccaatgaacatgacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccatgagaac 4587892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 45687343 - 45687417
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||| || |  | |||||||||||||||||||||||||||||||| |||||||||||||    
T  45687343 tctcaccaatgaacaagacaatcaaaaaatttcactcacccaaggtgtttacaatgtttcccaacccaagagaac 45687417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 5208007 - 5208120
Alignment:
Q  6 ccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagtt 104  Q
    |||||||||||| ||||  | |||||||||||||||||||||||||| ||||||||| || |||||||||| || | ||||||||| |||||| | ||||    
T  5208007 ccaatgaacaagtcactaaatgattttcactcacccaaggtgtttacaaatgtttcccaatccaagagaaccctcaccaaagacccgcaaccctatagtt 5208106  T
Q  105 ctctcctttgattt 118  Q
      ||||||||||||    
T  5208107 acctcctttgattt 5208120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 37229882 - 37229957
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  37229882 tctcaccaatgaacaagacactcattgattttcactcacccaaggtgtttacaaatgttttccaacccaagagaac 37229957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 48142538 - 48142651
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaa-tgtttcctaacccaagagaactctaatcaaagaccctcaacccga 99  Q
    ||||| |||||  |||||||||| | ||||||||||||||| | ||||||| || ||||||| ||| ||||||||| ||||||||||||| ||||||| |    
T  48142538 tctcatcaatgggcaagacactcaatgattttcactcacccgaagtgtttaaaaatgtttcccaactcaagagaaccctaatcaaagaccatcaacccta 48142637  T
Q  100 aagttctctccttt 113  Q
    |||||  |||||||    
T  48142638 aagttacctccttt 48142651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 52093886 - 52093943
Alignment:
Q  63 aacccaagagaactctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    ||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  52093886 aacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcc 52093943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 3910075 - 3909996
Alignment:
Q  41 caaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||| |||| |||||  |||||  ||||||||||||||    
T  3910075 caaggtgtttacaatgtttctcaacctaagagaactctaatcaaaggccctaaacccttaagttacctcctttgatttcc 3909996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 55085524 - 55085578
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||||||||||||||||| || | |||||||||||||||||||||||||||||    
T  55085524 tctcaccaatgaacaagacagtcaatgattttcactcacccaaggtgtttacaat 55085578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40632453 - 40632400
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  40632453 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 40632400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 54883028 - 54882975
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  54883028 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 54882975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3913456 - 3913408
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtt 49  Q
    |||||| |||||||||||||||| | |||||||||||||||||||||||    
T  3913456 tctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtt 3913408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2209721 - 2209668
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||| ||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  2209721 tctcaacaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 2209668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 46703508 - 46703454
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||||||||||||||||||||    |||||||||| |||||||||||||||||    
T  46703508 tctcaccaatgaacaagacactcatgaattttcactctcccaaggtgtttacaat 46703454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 5112466 - 5112503
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| |||||||||||||    
T  5112466 acccaaggtgtttacaatgtttcccaacccaagagaac 5112503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 31985501 - 31985424
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga-actctaatcaaagaccctcaacccgaaagttctctcctttg 114  Q
    |||||||||||||||||||||||| |||||||||||  ||| |  |||| || |||||||| ||||||| ||||||||    
T  31985501 acccaaggtgtttacaatgtttcccaacccaagagatcctcaatacaaaaacactcaaccctaaagttccctcctttg 31985424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 46147581 - 46147634
Alignment:
Q  67 caagagaactctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    ||||| ||| ||||||||||||||||||||| ||||||  ||||||||||||||    
T  46147581 caagaaaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttcc 46147634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 6677448 - 6677360
Alignment:
Q  30 tttcactcacccaaggtgtttacaa-tgtttcctaacccaagagaa-ctctaatcaaagaccctcaacccgaaagttctctcctttgat 116  Q
    ||||||||| |||| |||||||||| ||||||| |||||||||||| | || | ||||||| |||||||| ||||||  ||||||||||    
T  6677448 tttcactcatccaatgtgtttacaaatgtttcccaacccaagagaacccctgaacaaagacactcaaccctaaagttacctcctttgat 6677360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 3777778 - 3777813
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  3777778 acccaaggtgtttacaatgtttcccaacccaagaga 3777813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 5396539 - 5396504
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  5396539 acccaaggtgtttacaatgtttcccaacccaagaga 5396504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 6743283 - 6743248
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  6743283 acccaaggtgtttacaatgtttcccaacccaagaga 6743248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 10047610 - 10047645
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  10047610 acccaaggtgtttacaatgtttcccaacccaagaga 10047645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 16623161 - 16623126
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  16623161 acccaaggtgtttacaatgtttcccaacccaagaga 16623126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 16628740 - 16628705
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  16628740 acccaaggtgtttacaatgtttcccaacccaagaga 16628705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 45687432 - 45687475
Alignment:
Q  77 ctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||    
T  45687432 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcc 45687475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 5349905 - 5349840
Alignment:
Q  10 tgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaac 75  Q
    |||||||||||||| | |||||||| ||| ||||||||||||| ||||||||| ||||||| |||||    
T  5349905 tgaacaagacactcaaagattttcaatcatccaaggtgtttacaaatgtttcc-aacccaaaagaac 5349840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6655964 - 6655911
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||| | |||||||||||||| | ||||||||||| |||||||||||||||||    
T  6655964 tctcacaagtgaacaagacactc-atgattttcactctcccaaggtgtttacaat 6655911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8665416 - 8665362
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||||||||||||||||||||    ||||||||||  ||||||||||||||||    
T  8665416 tctcaccaatgaacaagacactcatgaattttcactcttccaaggtgtttacaat 8665362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12119546 - 12119492
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||| |||||||||||||||   ||||||||||| |||||||| ||||||||    
T  12119546 tctcacctatgaacaagacactcattgattttcactctcccaaggtatttacaat 12119492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21688256 - 21688207
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgttta 51  Q
    ||||||| ||||||||||||||| | ||||||||||| |||||||||||||    
T  21688256 tctcaccgatgaacaagacactc-atgattttcactcccccaaggtgttta 21688207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 37755112 - 37755202
Alignment:
Q  30 tttcactcacccaaggtgtttac-aatgtttcctaacccaagagaa-ctctaatcaaagaccctcaacccgaaagttctctcctttgattt 118  Q
    ||||||||||| ||||||||||| ||| |||| ||| ||||||||| |||| | ||||||| ||||| || ||||||  ||||||||||||    
T  37755112 tttcactcacctaaggtgtttacaaatatttcataatccaagagaacctctcaccaaagactctcaatcctaaagttacctcctttgattt 37755202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 50674006 - 50674059
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||| |||||||| ||||||| | ||||||||||| |||||||||||||||||    
T  50674006 tctcacaaatgaacacgacactc-atgattttcactctcccaaggtgtttacaat 50674059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 52065592 - 52065534
Alignment:
Q  14 caagacactcgacgattttcactcacccaaggtgtttacaa-tgtttcctaacccaaga 71  Q
    ||||| |||||| ||||||||||||||||||| ||| |||| ||||||| |||||||||    
T  52065592 caagagactcgatgattttcactcacccaaggggttcacaattgtttcccaacccaaga 52065534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 5269066 - 5269033
Alignment:
Q  40 ccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||| |||||||||||    
T  5269066 ccaaggtgtttacaatgtttcccaacccaagaga 5269033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8648147 - 8648082
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttaca-atgtttcctaac 65  Q
    |||||||||||||||||||||||    ||||||||||  ||||||||||||||  |||||||||||    
T  8648147 tctcaccaatgaacaagacactcatgaattttcactcttccaaggtgtttacagttgtttcctaac 8648082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 39774173 - 39774136
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  39774173 acccaaggtgtttacaatgtttcccaactcaagagaac 39774136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 25861898 - 25861866
Alignment:
Q  41 caaggtgtttacaatgtttcctaacccaagaga 73  Q
    ||||||||||||||||||||| |||||||||||    
T  25861898 caaggtgtttacaatgtttcccaacccaagaga 25861866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 29056359 - 29056295
Alignment:
Q  8 aatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaaga 71  Q
    ||||||||| |||||| | |||||| ||||||||||||||||| | ||||||||| ||| |||||    
T  29056359 aatgaacaaaacactcaatgatttttactcacccaaggtgtttccaaatgtttcccaacacaaga 29056295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 31495509 - 31495557
Alignment:
Q  41 caaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagac 88  Q
    |||||||||| | |||||||| |||||||||||| ||||||||||||||    
T  31495509 caaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagac 31495557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 31659246 - 31659127
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  31659246 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttccgaacccaagagaactctaatcaaagaccctcaaccctaa 31659147  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  31659146 agttacctcctttgatttcc 31659127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1833530 - 1833411
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||  ||    
T  1833530 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaatccaagagaactctaatcaaagaccctcaaccttaa 1833431  T
Q  101 agttctctcctttgatttcc 120  Q
    |||| |||||||||||||||    
T  1833430 agttatctcctttgatttcc 1833411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 197068 - 197185
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  197068 tctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 197167  T
Q  101 agttctctcctttgattt 118  Q
    ||||  ||||||||||||    
T  197168 agttacctcctttgattt 197185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 10925231 - 10925114
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||    
T  10925231 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactataatcaaagaccctcaaccctaa 10925132  T
Q  101 agttctctcctttgattt 118  Q
    ||||  ||||||||||||    
T  10925131 agttacctcctttgattt 10925114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 3847281 - 3847400
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||    
T  3847281 tctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcgaccctaa 3847380  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  3847381 agttacctcctttgatttcc 3847400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 13138134 - 13138253
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||    
T  13138134 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaccccaagagaaccctaatcaaagaccctcaaccctaa 13138233  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  13138234 agttacctcctttgatttcc 13138253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 28223581 - 28223700
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  28223581 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtcttcaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 28223680  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  28223681 agttacctcctttgatttcc 28223700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 44455168 - 44455051
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||    
T  44455168 tctcaccaatgaacaagacactcaatggttttcactcacccaaggtgtttacaatgtttcccaacccaagaaaactctaatcaaagaccctcaaccctaa 44455069  T
Q  101 agttctctcctttgattt 118  Q
    ||||  ||||||||||||    
T  44455068 agttacctcctttgattt 44455051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 834327 - 834446
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||    
T  834327 tctcacaaatgaacaagacactcaatgattttcacgcacccaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaa 834426  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  834427 agttacctcctttgatttcc 834446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 3156873 - 3156755
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  3156873 tctcaccaatgaacaagacactcaatgattttcactcacc-agggtgtttacaatgtttccaaacccaagagaactctaatcaaagaccctcaaccctaa 3156775  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  3156774 agttacctcctttgatttcc 3156755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 8550947 - 8551066
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||    
T  8550947 tctcacaaatgaacaagacactcaatgattttcactcacccaatgtgtttacaatgtttcttaacccaagagaactctaatcaaagacccttaaccctaa 8551046  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  8551047 agttaactcctttgatttcc 8551066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 28220386 - 28220505
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||| ||||||||| | |||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| ||    
T  28220386 tctcaccaatgaataagacactcaatgattttcactcacccaaggtgttttcaatgcttcccaacccaagagaactctaatcaaagaccctcaaccctaa 28220485  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  28220486 agttacctcctttgatttcc 28220505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 15820313 - 15820196
Alignment:
Q  3 tcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaag 102  Q
    ||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  15820313 tcaccaaagaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaactcaagagaactctaatcaaagaccctcaaccctaaag 15820214  T
Q  103 ttctctcctttgatttcc 120  Q
    ||  ||| ||||||||||    
T  15820213 ttacctcttttgatttcc 15820196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 3189338 - 3189220
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||    
T  3189338 tctcaccaatgaacaagacactcagtgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaa 3189240  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  3189239 agttacctcctttgatttcc 3189220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 3198155 - 3198037
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||    
T  3198155 tctcaccaatgaacaagacactcagtgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaa 3198057  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  3198056 agttacctcctttgatttcc 3198037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 3206994 - 3206876
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||    
T  3206994 tctcaccaatgaacaagacactcagtgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaa 3206896  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  3206895 agttacctcctttgatttcc 3206876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 37503714 - 37503833
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||| | ||||||| ||||||||||||||||||||||||||| ||    
T  37503714 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatattttccaacccaatagaactctaatcaaagaccctcaaccctaa 37503813  T
Q  101 agttctctcctttgatttcc 120  Q
    |||   ||||||||||||||    
T  37503814 agtcacctcctttgatttcc 37503833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 45644515 - 45644634
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||  | |||||||||||||||||| |||||||||||||| | |||| |||||||| ||||||||||||||||||||| ||    
T  45644515 tctcaccaatgaacaagacacttaatgattttcactcacccaagatgtttacaatgttttccaacctaagagaaccctaatcaaagaccctcaaccctaa 45644614  T
Q  101 agttctctcctttgatttcc 120  Q
    |||| |||||||||||||||    
T  45644615 agttatctcctttgatttcc 45644634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 49918358 - 49918238
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgttt-acaatgtttcctaacccaagagaactctaatcaaagaccctcaacccga 99  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||| | ||||||||| || |||||||||||||||||||||||| ||||||| |    
T  49918358 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgttttataatgtttcccaatccaagagaactctaatcaaagaccttcaacccta 49918259  T
Q  100 aagttctctcctttgatttcc 120  Q
    |||||  ||||||||||||||    
T  49918258 aagttacctcctttgatttcc 49918238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 20762679 - 20762561
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||||||||||| |||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  20762679 tctcaccaatgaacaagatactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaa 20762581  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  20762580 agttgcttcctttgatttcc 20762561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 50169370 - 50169489
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||| ||||||||| ||| ||||| ||| ||||||||||| ||    
T  50169370 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtatttacaatgtttcccaacccaagataaccctaataaaaaaccctcaaccctaa 50169469  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  50169470 agttacctcctttgatttcc 50169489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 37560029 - 37560147
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||||||||||||||  ||    
T  37560029 tctcaccaatgaacaagacactcaatgattttcactcacctaatgtgtttacaatgttttcaaacccaagagaactctaatcaaagaccctcaaccttaa 37560128  T
Q  101 agttctctcctttgatttc 119  Q
    ||||  ||| |||||||||    
T  37560129 agttacctcatttgatttc 37560147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 13659496 - 13659615
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||  ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||  |    
T  13659496 tctcacaaatgaacaagacactcaatgattttcactaccccaaggtgtttacaatgtttctcaacctaagagaactctaatcaaagaccctcaacccaca 13659595  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  13659596 agttacctcctttgatttcc 13659615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 4552797 - 4552916
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||  |||||||||||||   ||| ||||||||||||||| ||    
T  4552797 tctcaccaatgaacaagacactcaatgattttccctcacccaaggtgtttacaatgtttctcaacccaagagaacctcaattaaagaccctcaaccctaa 4552896  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||| ||||||    
T  4552897 agttacctcctttaatttcc 4552916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 23555425 - 23555544
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||| ||| ||||||||| |  ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||  |    
T  23555425 tctcaccaaagaataagacactcaataattttcattcacccaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagatcctcaaccctga 23555524  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  23555525 agttacctcctttgatttcc 23555544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 46064926 - 46064807
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||| | | |||||||||||  ||||||||||||||||||   ||    
T  46064926 tctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgttttccaccccaagagaaccataatcaaagaccctcaacaataa 46064827  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  || |||||||||||    
T  46064826 agttaccttctttgatttcc 46064807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 928139 - 928257
Alignment:
Q  3 tcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaa 101  Q
    ||||||| |||||||||||||   |||||||||||||||||||||||||| ||||||||| ||||||||||||  ||||||||||||| ||||||  |||    
T  928139 tcaccaaagaacaagacactcattgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaatcctaatcaaagaccttcaaccataaa 928238  T
Q  102 gttctctcctttgatttcc 120  Q
    |||  ||||||||||||||    
T  928239 gttacctcctttgatttcc 928257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 50167335 - 50167409
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50167335 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaac 50167409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 40122358 - 40122477
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| ||||||||||||| || | |||||| |||||||||||||||||||||||||||| || |||||| ||||||||| || || ||||||||  ||    
T  40122358 tctcacaaatgaacaagacattcaatgatttttactcacccaaggtgtttacaatgtttcccaatccaagataactctaattaatgatcctcaaccataa 40122457  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  40122458 agttacctcctttgatttcc 40122477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 30476618 - 30476700
Alignment:
Q  10 tgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctca 93  Q
    ||||||||| |||| | ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  30476618 tgaacaaga-actcaatgattttcacccacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaataccctca 30476700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 28265714 - 28265845
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactc------------taatcaaagac 88  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||| |||||||| |            |||||||||||    
T  28265714 tctcgccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacctaagagaacccctcaagagaacctaatcaaagac 28265813  T
Q  89 cctcaacccgaaagttctctcctttgatttcc 120  Q
    ||||||||| ||||||  ||||||||||||||    
T  28265814 cctcaaccctaaagttacctcctttgatttcc 28265845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 13316517 - 13316581
Alignment:
Q  40 ccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagtt 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  13316517 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagtt 13316581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 51765392 - 51765307
Alignment:
Q  11 gaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaaccc 97  Q
    ||||||||||||| | ||||| |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  51765392 gaacaagacactcaatgatttacactcacc-aaggtgtttacaatgtttcc-aacccaagagaagctctaatcaaagaccctaaaccc 51765307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 44650323 - 44650443
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaactctaatcaaagaccctcaacccga 99  Q
    |||| |||||||||||||||||| |  |||||||||||||||| |||||||| ||||||| | |||  |||||||| || | ||||||| |||| ||| |    
T  44650323 tctctccaatgaacaagacactcaataattttcactcacccaaagtgtttacaaatgttttccaacttaagagaaccctcaccaaagactctcatcccta 44650422  T
Q  100 aagttctctcctttgatttcc 120  Q
    || || |||||||||||||||    
T  44650423 aaattttctcctttgatttcc 44650443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 777226 - 777177
Alignment:
Q  26 cgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  777226 cgattttcactcacccaaagtgtttacaatgtttcccaacccaagagaac 777177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11348706 - 11348653
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  11348706 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 11348653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13547249 - 13547302
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  13547249 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 13547302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13549160 - 13549213
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  13549160 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 13549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29136255 - 29136202
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  29136255 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 29136202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37033233 - 37033286
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  37033233 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 37033286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37879071 - 37879124
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  37879071 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 37879124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 41360922 - 41360857
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaaccc 67  Q
    ||||||||||||||||||||||| |  ||||||||||||||||| ||||||| |||||||| |||||    
T  41360922 tctcaccaatgaacaagacactcaat-attttcactcacccaagatgtttacgatgtttcccaaccc 41360857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16455630 - 16455585
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggt 46  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||    
T  16455630 tctcaccaatgaacaagacactcaatgattttcactcacccaaggt 16455585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31925867 - 31925919
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaa 54  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||    
T  31925867 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaa 31925919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 193619 - 193566
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||| | |||||||||||||||||    
T  193619 tctcaccaatgaacaagacactc-atgattttcaccctcccaaggtgtttacaat 193566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 37168305 - 37168252
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| | |||||||||||||||    
T  37168305 tctcaccaatgaacaagacactc-atgattttcactctctcaaggtgtttacaat 37168252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42298135 - 42298188
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | |||||| |||| |||||||||||||||||    
T  42298135 tctcaccaatgaacaagacactc-atgatttttactctcccaaggtgtttacaat 42298188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 47115179 - 47115126
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||| ||||||||||    
T  47115179 tctcaccaatgaacaagacactc-atgattttcactctcccaagatgtttacaat 47115126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19754502 - 19754442
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcc 61  Q
    ||||||||||||||||||||||| | ||||||||||| | |||||||||||| |||||||||    
T  19754502 tctcaccaatgaacaagacactc-atgattttcactctctcaaggtgtttacgaatgtttcc 19754442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 22819660 - 22819697
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| |||||||||||||    
T  22819660 acccaaggtgtttacaatgtttcccaacccaagagaac 22819697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 47098693 - 47098656
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| |||||||||||||    
T  47098693 acccaaggtgtttacaatgtttcccaacccaagagaac 47098656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 47102707 - 47102670
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| |||||||||||||    
T  47102707 acccaaggtgtttacaatgtttcccaacccaagagaac 47102670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 3281936 - 3281971
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  3281936 acccaaggtgtttacaatgtttcccaacccaagaga 3281971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 13604490 - 13604455
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  13604490 acccaaggtgtttacaatgtttcccaacccaagaga 13604455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 16124382 - 16124347
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  16124382 acccaaggtgtttacaatgtttcccaacccaagaga 16124347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 19752693 - 19752643
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac 52  Q
    ||||||||||||||||||||||| | ||||||||||| | ||||||||||||    
T  19752693 tctcaccaatgaacaagacactc-atgattttcactctctcaaggtgtttac 19752643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 50167424 - 50167467
Alignment:
Q  77 ctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||    
T  50167424 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcc 50167467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 34603584 - 34603530
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||||||||||||||||||||    |||||||||  |||||||||||||||||    
T  34603584 tctcaccaatgaacaagacactcatgaattttcactttcccaaggtgtttacaat 34603530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 47255500 - 47255553
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||  ||||||||    
T  47255500 tctcaccaatgaacaagacactc-atgattttcactctcccaaggcatttacaat 47255553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 37069998 - 37070031
Alignment:
Q  40 ccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||| |||||||||||    
T  37069998 ccaaggtgtttacaatgtttcccaacccaagaga 37070031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 8281547 - 8281630
Alignment:
Q  38 acccaaggtgtttacaa-tgtttcctaacccaagagaa--ctctaatcaaagaccctcaacccgaaagttctctcctttgattt 118  Q
    ||||||||||||||||| || |||| ||| ||||| ||  |||| ||||||||  | |||||| ||||||||||||||||||||    
T  8281547 acccaaggtgtttacaaatggttcccaacacaagaaaaaactctcatcaaagatgcccaaccctaaagttctctcctttgattt 8281630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 24202635 - 24202556
Alignment:
Q  38 acccaaggtgtttacaatg--tttcctaacccaagaga-actctaatcaaagaccctcaacccgaaagttctctcctttg 114  Q
    |||||||||| ||||||||  ||||| ||||||||||| |||||   ||||||| |||||||| ||||||| ||||||||    
T  24202635 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctaaagttccctcctttg 24202556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 7e-46; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 28137568 - 28137685
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  28137568 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 28137667  T
Q  101 agttctctcctttgattt 118  Q
    ||||  ||||||||||||    
T  28137668 agttaactcctttgattt 28137685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 9183191 - 9183310
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||    
T  9183191 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaggagaactctaatcaaagaccctcaaccctaa 9183290  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  9183291 agttacctcctttgatttcc 9183310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5406359 - 5406477
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||    
T  5406359 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccgagagaactctaatcaaagaccctaaaccctaa 5406457  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  5406458 agttgcctcctttgatttcc 5406477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5410684 - 5410802
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||    
T  5410684 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccgagagaactctaatcaaagaccctaaaccctaa 5410782  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  5410783 agttgcctcctttgatttcc 5410802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 16567201 - 16567095
Alignment:
Q  14 caagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctctccttt 113  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||  |||||||    
T  16567201 caagacactcaatgattttcactcacccaaggtgtttacaatgtttccaaacccaagagaactctaatcaaagacccttaaccctaaagttaactccttt 16567102  T
Q  114 gatttcc 120  Q
    |||||||    
T  16567101 gatttcc 16567095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5413553 - 5413671
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| || ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||    
T  5413553 tctcaccaatgaacaagacactcaatgattttcactcacc-aatgtgtttacaatgtttcccaacccgagagaactctaatcaaagaccctaaaccctaa 5413651  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  5413652 agttgcctcctttgatttcc 5413671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 33211345 - 33211464
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||||||||| |||||| | |||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||   ||    
T  33211345 tctcaccaatgaacaaaacactcaatgattttcagtgacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaactgtaa 33211444  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  33211445 agttacctcctttgatttcc 33211464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 33160513 - 33160629
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgatttt-cactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccga 99  Q
    ||||||||||||| ||||||||| | |||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |    
T  33160513 tctcaccaatgaataagacactcaatgatttttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagactctcaacccta 33160611  T
Q  100 aagttctctcctttgatt 117  Q
    |||||  |||||||||||    
T  33160612 aagttacctcctttgatt 33160629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 16452490 - 16452608
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||| ||| | ||    
T  16452490 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttctcaacccaagagaactctaatcaaagaccctaaactctaa 16452588  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   | |||||||||||    
T  16452589 agttgcttactttgatttcc 16452608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 26954453 - 26954564
Alignment:
Q  9 atgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctct 108  Q
    ||||||||||||||| | ||||||||||| || |||||||||||||||||||| |||| |||| |||||||||||||||| |||||||| ||||||  ||    
T  26954453 atgaacaagacactcaatgattttcactccccaaaggtgtttacaatgtttcccaacctaagataactctaatcaaagactctcaaccctaaagttacct 26954552  T
Q  109 cctttgatttcc 120  Q
    ||||||||||||    
T  26954553 cctttgatttcc 26954564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 16569038 - 16568932
Alignment:
Q  14 caagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctctccttt 113  Q
    |||||||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||   ||||||    
T  16569038 caagacactcaatgattttcacttacccaaggtgtttacaatgtttccaaacccaagagaactctaatcaaagacccttaaccctaaatttaattccttt 16568939  T
Q  114 gatttcc 120  Q
    |||||||    
T  16568938 gatttcc 16568932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 30834697 - 30834814
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||||||| | ||||| ||    
T  30834697 tctcaccaatgaacaagacactcaatgattttcactcaccga-ggtgtttacaatgtttctcaacccaagagaactctaatcaaagaccataaaccctaa 30834795  T
Q  101 agttctctcctttgatttc 119  Q
    ||||   ||||||||||||    
T  30834796 agttgcttcctttgatttc 30834814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 2171691 - 2171787
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagag-aactctaatcaaagaccctcaaccc 97  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  2171691 tctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccc 2171787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 31404842 - 31404953
Alignment:
Q  9 atgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatc-aaagaccctcaacccgaaagttctc 107  Q
    ||||||||||||||| | |||||||||||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||| ||||| ||||||  |    
T  31404842 atgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgttttccaacccaagagaactctaatcaaaagaccctaaaccctaaagttgcc 31404940  T
Q  108 tcctttgatttcc 120  Q
    |||||||||||||    
T  31404941 tcctttgatttcc 31404953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 3039063 - 3039137
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  3039063 tctcaccaatgaacaagacattcaatgattttcactcactcaaggtgtttacaatgtttcccaacccaagagaac 3039137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 4045431 - 4045356
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaac 75  Q
    |||| ||||| |||||||||||| | ||||||||||||||| |||||||||| ||||||||| ||| |||||||||    
T  4045431 tctctccaataaacaagacactcaatgattttcactcaccctaggtgtttacaaatgtttcccaactcaagagaac 4045356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21593672 - 21593619
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  21593672 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 21593619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 24435839 - 24435763
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctctcctttg 114  Q
    |||||||||||||||||||||||| ||| |||||||||   |  ||||||| |||||||| |||||| |||||||||    
T  24435839 acccaaggtgtttacaatgtttcccaactcaagagaacctcacacaaagacactcaaccctaaagttatctcctttg 24435763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 21356266 - 21356301
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    ||||||||||||||||||||||||||||||||||||    
T  21356266 acccaaggtgtttacaatgtttcctaacccaagaga 21356301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 603240 - 603293
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||  |||||||||||||||||    
T  603240 tctcaccaatgaacaagacactc-atgattttcactatcccaaggtgtttacaat 603293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3808869 - 3808922
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||||||||||||||||||| |  ||||||||||| |||||||||||||||||    
T  3808869 tctcaccaatgaacaagacacttgt-gattttcactctcccaaggtgtttacaat 3808922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 6097610 - 6097679
Alignment:
Q  18 acactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagaga-actctaatcaaaga 87  Q
    |||||| | |||||||||||||| ||||||||||| |||||||| |||| |||||| ||||||||||||||    
T  6097610 acactcaatgattttcactcacc-aaggtgtttaccatgtttcccaaccaaagagatactctaatcaaaga 6097679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 5757346 - 5757269
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaactctaat-caaagaccctcaacccgaaagttctctcctttg 114  Q
    |||||||||||||||||||||||| ||||||||||| |   ||| ||||||| |||||||| ||||||  ||||||||    
T  5757346 acccaaggtgtttacaatgtttcccaacccaagagatcctaaatacaaagacactcaaccctaaagttacctcctttg 5757269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 26830289 - 26830337
Alignment:
Q  6 ccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  26830289 ccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 26830337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 5017364 - 5017329
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  5017364 acccaaggtgtttacaatgtttcccaacccaagaga 5017329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 5572111 - 5572076
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  5572111 acccaaggtgtttacaatgtttcccaacccaagaga 5572076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 2973099 - 2973152
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||| ||||||  | ||||||||||| |||||||||||||||||    
T  2973099 tctcaccaatgaacacgacactt-atgattttcactctcccaaggtgtttacaat 2973152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 3039152 - 3039202
Alignment:
Q  77 ctaatcaaagaccctcaacccgaaagttctctcctttgatttccgagtttt 127  Q
    ||||||||||||||||||||| ||||||  ||||||||||| || ||||||    
T  3039152 ctaatcaaagaccctcaaccctaaagttacctcctttgattcccaagtttt 3039202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5043635 - 5043582
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||| |||||||||||||||| | ||||||||||| | |||||||||||||||    
T  5043635 tctcacgaatgaacaagacactc-atgattttcactctcacaaggtgtttacaat 5043582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 3072952 - 3073009
Alignment:
Q  41 caaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaaccc 97  Q
    |||||||||| | |||||||| |||||||||||| |||||||||||||| || |||||    
T  3072952 caaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccc 3073009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 22709241 - 22709274
Alignment:
Q  40 ccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||| |||||||||||    
T  22709241 ccaaggtgtttacaatgtttcccaacccaagaga 22709274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 1e-44; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 28750815 - 28750934
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  28750815 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgttttcaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 28750914  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  28750915 agttacctcctttgatttcc 28750934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 42428590 - 42428709
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||| ||    
T  42428590 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatatttcccaacccaagagaactctaatcaaagaccttcaaccctaa 42428689  T
Q  101 agttctctcctttgatttcc 120  Q
    |||| |||||||||||||||    
T  42428690 agttatctcctttgatttcc 42428709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 533777 - 533658
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||    
T  533777 tctcaccaatgaacaagacacgcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccccaaccctaa 533678  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  533677 agttacctcctttgatttcc 533658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 31182981 - 31182862
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  31182981 tctcacaaatgaacaagacactcaatgattttcactcacctaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 31182882  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  31182881 agttacctcctttgatttcc 31182862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5887576 - 5887695
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| ||||||||||||| || | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||    
T  5887576 tctcacaaatgaacaagacattcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaataccctcaaccctaa 5887675  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  5887676 agttacctcctttgatttcc 5887695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 13488207 - 13488092
Alignment:
Q  5 accaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagtt 104  Q
    ||||||||||||||||||| |  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||    
T  13488207 accaatgaacaagacactcaataattttcactcacccaaggtgtttacaatgttttccaacccaagagaactctaatcaaagaccctcaaccctaaagtt 13488108  T
Q  105 ctctcctttgatttcc 120  Q
      ||||||||||||||    
T  13488107 acctcctttgatttcc 13488092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 39468709 - 39468828
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||    
T  39468709 tctcactaatgaacaagacactcaatgattttcactcactcaaggtgtttacaatgtttcccaacccaagagaactctaatgaaagaccctcaaccctaa 39468808  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  39468809 agttacctcctttgatttcc 39468828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 42426395 - 42426514
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||| ||    
T  42426395 tctcaccaatgaacaagacactcaataattttcactcacccaaggtgtttacaatgtttcccaatctaagagaactctaatcaaagaccctcaaccctaa 42426494  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  42426495 agttacctcctttgatttcc 42426514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 13239759 - 13239643
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||    
T  13239759 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataa 13239661  T
Q  101 agttctctcctttgattt 118  Q
    ||||  ||||||||||||    
T  13239660 agttacctcctttgattt 13239643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 25412769 - 25412651
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  25412769 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaa 25412671  T
Q  101 agttctctcctttgatttcc 120  Q
     |||  ||||||||||||||    
T  25412670 tgttgcctcctttgatttcc 25412651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 36074205 - 36074323
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  36074205 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaa 36074303  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  36074304 agttgcttcctttgatttcc 36074323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 32636832 - 32636714
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||||| ||    
T  32636832 tctcaccaatgaataagacactcaatgattttcactcacccaaggtgtttacaatgtttcactacccaagagaactctaatcaaagacccttaaccctaa 32636733  T
Q  101 agttctctcctttgatttc 119  Q
    ||||  |||||||||||||    
T  32636732 agttacctcctttgatttc 32636714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 538033 - 537916
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||| | | |||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||| ||    
T  538033 tctcactaatgaacaagacacgcaatgattttcactcacccaaggtgtttacgatgtttcccaagccaagagaactctaatcaaagaccctcaaccctaa 537934  T
Q  101 agttctctcctttgattt 118  Q
    ||||  ||||||||||||    
T  537933 agttacctcctttgattt 537916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 8566106 - 8566198
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctca 93  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8566106 tctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttccgaacccaagagaactctaatcaaagaccctca 8566198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 19806391 - 19806296
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaaccc 97  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19806391 tctcaccaatgaacaagacactcaatgattt-cactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccc 19806296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 3075818 - 3075937
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| ||||||| |||||||| | |||||||||||| | |||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||    
T  3075818 tctcacaaatgaacgagacactcaatgattttcactcatcaaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaa 3075917  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  3075918 agttacctcctttgatttcc 3075937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 13343068 - 13342950
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||| ||    
T  13343068 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcagagaccctaaaccctaa 13342970  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  13342969 agttgcttcctttgatttcc 13342950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 33831688 - 33831569
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||| ||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||    
T  33831688 tctcacaaatgaataagacactcaatgattttcactcacccaaggtgtttacaatgttttccaacccaagagaactctaatcaaagacccttaaccctaa 33831589  T
Q  101 agttctctcctttgatttcc 120  Q
    | ||  ||||||||||||||    
T  33831588 aattaactcctttgatttcc 33831569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 42926901 - 42926782
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||    
T  42926901 tctcaccaaagaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaatccaagagaactctaatcaaagaccatcaatcctaa 42926802  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||| ||||||||||    
T  42926801 agttacctcatttgatttcc 42926782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16452088 - 16451970
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||| ||||||||||||||||| | |||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||    
T  16452088 tctcatcaatgaacaagacactcaatgattgtcacttacc-aaggtgtttacaatgtttccgaacccaagagaactctaatcaaagatcctcaaccctaa 16451990  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  16451989 agttacctcctttgatttcc 16451970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 30182596 - 30182478
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||| | ||| ||    
T  30182596 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttgcaatgtttcccaacccaagagaactctaatcaaagaccctaatccctaa 30182498  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  30182497 agttgcttcctttgatttcc 30182478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 30683081 - 30683199
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | |||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||    
T  30683081 tctcacaaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcgcaacccaagagaactctaatcaaagaccctcaaccctaa 30683179  T
Q  101 agttctctcctttgatttcc 120  Q
    | ||  ||||| ||||||||    
T  30683180 aattacctcctctgatttcc 30683199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 42310095 - 42310214
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||||| |||||||||| | |||||||||| ||||||  |||||||||||||| | |||| |||||||| ||||||||||||| | ||||| ||    
T  42310095 tctcaccaatgagcaagacactcaatgattttcacttacccaaaatgtttacaatgttttccaaccaaagagaaccctaatcaaagaccataaaccctaa 42310194  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  42310195 agttacctcctttgatttcc 42310214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 16409477 - 16409394
Alignment:
Q  14 caagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaaccc 97  Q
    |||||||||| | |||||||||||||| ||||||||||| |||||||| |||||||||||| |||||||||||||| || |||||    
T  16409477 caagacactcaatgattttcactcacc-aaggtgtttaccatgtttcccaacccaagagaagctctaatcaaagactctaaaccc 16409394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 26177885 - 26177802
Alignment:
Q  14 caagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaaccc 97  Q
    |||||||||| | |||||||||||||| ||||||||||| |||||||| |||||||||||| |||||||||||||| || |||||    
T  26177885 caagacactcaatgattttcactcacc-aaggtgtttaccatgtttcccaacccaagagaagctctaatcaaagactctaaaccc 26177802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37439141 - 37439070
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    ||||||||||||| ||||||||| | |||||||||||| |||| ||||||||||||||||| |||||||||||    
T  37439141 tctcaccaatgaataagacactcaatgattttcactca-ccaaagtgtttacaatgtttcccaacccaagaga 37439070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 9789390 - 9789473
Alignment:
Q  14 caagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaaccc 97  Q
    |||||||||| | |||||||||||||| ||||||||| | |||||||| |||||||||||| |||||||||||||| || |||||    
T  9789390 caagacactcaatgattttcactcacc-aaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccc 9789473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 18441814 - 18441897
Alignment:
Q  14 caagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaaccc 97  Q
    |||||||||| | |||||||||||||| ||||||||| | |||||||| |||||||||||| |||||||||||||| || |||||    
T  18441814 caagacactcaatgattttcactcacc-aaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccc 18441897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 26170776 - 26170693
Alignment:
Q  14 caagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaaccc 97  Q
    |||||||||| | |||||||||||||| ||||||||||| |||||||| |||||||||||| || ||||||||||| || |||||    
T  26170776 caagacactcaatgattttcactcacc-aaggtgtttaccatgtttcccaacccaagagaagctgtaatcaaagactctaaaccc 26170693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 213473 - 213420
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  213473 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 213420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5058055 - 5058002
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | |||||||||||  ||||||||||||||||    
T  5058055 tctcaccaatgaacaagacactc-atgattttcactcttccaaggtgtttacaat 5058002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 28278324 - 28278271
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| ||||| |||||||||||    
T  28278324 tctcaccaatgaacaagacactc-atgattttcactctcccaatgtgtttacaat 28278271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40147269 - 40147216
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||    
T  40147269 tctcaccaatgaacaagacactc-atgatttccactctcccaaggtgtttacaat 40147216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 11181700 - 11181663
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| |||||||||||||    
T  11181700 acccaaggtgtttacaatgtttcccaacccaagagaac 11181663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 17003827 - 17003790
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| |||||||||||||    
T  17003827 acccaaggtgtttacaatgtttccaaacccaagagaac 17003790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 24553395 - 24553358
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| |||||||||||||    
T  24553395 acccaaggtgtttacaatgtttcccaacccaagagaac 24553358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 28832486 - 28832523
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| |||||||||||||    
T  28832486 acccaaggtgtttacaatgtttcccaacccaagagaac 28832523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 3426337 - 3426392
Alignment:
Q  145 aaaccctcattaattggattgtcaaaagtggaaccatccacattgactttgatata 200  Q
    |||||| ||||| |||| ||| |||| | |||||||||||||||||||||||||||    
T  3426337 aaacccacattacttgggttgccaaaggaggaaccatccacattgactttgatata 3426392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 9353200 - 9353165
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  9353200 acccaaggtgtttacaatgtttcccaacccaagaga 9353165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 11916840 - 11916805
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  11916840 acccaaggtgtttacaatgtttcccaacccaagaga 11916805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 36932216 - 36932181
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  36932216 acccaaggtgtttacaatgtttcccaacccaagaga 36932181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 14520461 - 14520494
Alignment:
Q  40 ccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||| |||||||||||    
T  14520461 ccaaggtgtttacaatgtttcccaacccaagaga 14520494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16641100 - 16641153
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaa 54  Q
    |||| |||||||||||||||||  | || |||||||||| ||||||||||||||    
T  16641100 tctcgccaatgaacaagacacttaatgaatttcactcactcaaggtgtttacaa 16641153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 31300463 - 31300426
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||  |||||||||||||    
T  31300463 acccaaggtgtttacaatgtttctcaacccaagagaac 31300426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 3325893 - 3325825
Alignment:
Q  30 tttcactcacccaaggtgtttac-aatgtttcctaacccaagagaactctaatcaaagaccctcaaccc 97  Q
    ||||||||||||||||||||||| ||||||||  ||| ||||||||| || | ||||||| ||| ||||    
T  3325893 tttcactcacccaaggtgtttacaaatgtttctcaactcaagagaacactcaccaaagacactcgaccc 3325825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 16649857 - 16649901
Alignment:
Q  76 tctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    |||||||||||||| ||||||| ||||||  ||||||||||||||    
T  16649857 tctaatcaaagaccatcaaccctaaagttacctcctttgatttcc 16649901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 39284893 - 39284774
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  39284893 tctcaccaatgaacaagatactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 39284794  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  39284793 agttacctcctttgatttcc 39284774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 42362360 - 42362241
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  42362360 tctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 42362261  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  42362260 agttacctcctttgatttcc 42362241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 11151753 - 11151870
Alignment:
Q  3 tcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaag 102  Q
    |||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  11151753 tcaccaatgaacaagagactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaag 11151852  T
Q  103 ttctctcctttgatttcc 120  Q
    ||  ||||||||||||||    
T  11151853 ttacctcctttgatttcc 11151870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 723904 - 724023
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||    
T  723904 tctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaa 724003  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  724004 agttacctcctttgatttcc 724023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 11690509 - 11690390
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||    
T  11690509 tctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactataatcaaagaccctcaaccctaa 11690410  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  11690409 agttacctcctttgatttcc 11690390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 29867877 - 29867781
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaaccc 97  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29867877 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccc 29867781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 2334578 - 2334696
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||    
T  2334578 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaataccctcaaccctaa 2334676  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  2334677 agttacctcctttgatttcc 2334696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 17057529 - 17057648
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||| ||    
T  17057529 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatatttcccaacccaagagaactctaatcaaagaccttcaaccctaa 17057628  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  |||| |||||||||    
T  17057629 agttacctccgttgatttcc 17057648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 17085512 - 17085631
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||| ||    
T  17085512 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatatttcccaacccaagagaactctaatcaaagaccttcaaccctaa 17085611  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  |||| |||||||||    
T  17085612 agttacctccgttgatttcc 17085631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 38312248 - 38312129
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||    
T  38312248 tctcaccaatgaacaagacactcaatgattttcactcacacaaggtgtatacaatgtttcccaacccaagagaactctaatcaaagaacctcaaccctaa 38312149  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  38312148 agttacctcctttgatttcc 38312129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 33162612 - 33162729
Alignment:
Q  3 tcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaag 102  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| |||     
T  33162612 tcaccaatgaacaagacactcgatgattttcaatcacccaaggtgtttacaatgtttcccaactcaagagaaccctaatcaaagaccctcaaccctaaaa 33162711  T
Q  103 ttctctcctttgatttcc 120  Q
    ||  ||||||||||||||    
T  33162712 ttacctcctttgatttcc 33162729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 34139931 - 34140048
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| ||    
T  34139931 tctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagactttcaaccctaa 34140030  T
Q  101 agttctctcctttgattt 118  Q
    ||||  ||||||||||||    
T  34140031 agttacctcctttgattt 34140048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 36988239 - 36988354
Alignment:
Q  4 caccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagt 103  Q
    |||||||||||||||||||| | |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  36988239 caccaatgaacaagacactcaatgattttcactcacc-aaggtgtttactatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagt 36988337  T
Q  104 tctctcctttgatttcc 120  Q
    |  ||||||||||||||    
T  36988338 tacctcctttgatttcc 36988354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5723415 - 5723533
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||    
T  5723415 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccccaaaccctaa 5723513  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  5723514 agttgcctcctttgatttcc 5723533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 14633986 - 14634105
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| | ||    
T  14633986 tctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaaaagaactctaatcaaaaaccctcaactctaa 14634085  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  14634086 agttacctcctttgatttcc 14634105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 36318169 - 36318288
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||  ||||||| ||    
T  36318169 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatatttcccaacccaagataactctaatcaaagacattcaaccctaa 36318268  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  36318269 agttacctcctttgatttcc 36318288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 45099762 - 45099644
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  45099762 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaa 45099664  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  45099663 agttgcttcctttgatttcc 45099644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 36205824 - 36205942
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  36205824 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttaccatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaa 36205922  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  36205923 agttgcttcctttgatttcc 36205942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 4503293 - 4503411
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||| |||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| ||    
T  4503293 tctctccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaacctaaaccctaa 4503391  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  4503392 agttgcttcctttgatttcc 4503411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 14202594 - 14202686
Alignment:
Q  28 attttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||  ||| ||||||||||    
T  14202594 attttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacctcatttgatttcc 14202686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 24885662 - 24885583
Alignment:
Q  8 aatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaaga 87  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  24885662 aatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccatgagaactctaatcaaaga 24885583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36773570 - 36773496
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36773570 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaac 36773496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 6595167 - 6595285
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||| | | |||| |||||| || ||| |||||||||| ||||| | ||||||||||||||||||||||||||||||||| ||    
T  6595167 tctcaccaatgaacaagacacccaatgattctcactctccaaag-tgtttacaatttttcccagcccaagagaactctaatcaaagaccctcaaccctaa 6595265  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||| ||||||||||    
T  6595266 agttacctcatttgatttcc 6595285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 12123751 - 12123862
Alignment:
Q  8 aatgaacaagacactcgacgattttcactcacccaaggtgttta-caatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaaagttct 106  Q
    |||||||||||||||||| |||||||||||| ||||||||||||  ||||||||| |||| ||||||||||||| |||||||| ||||||  ||||||      
T  12123751 aatgaacaagacactcgatgattttcactcatccaaggtgtttataaatgtttcccaacctaagagaactctaaccaaagaccatcaaccttaaagttac 12123850  T
Q  107 ctcctttgattt 118  Q
    || |||||||||    
T  12123851 ctactttgattt 12123862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 4484501 - 4484587
Alignment:
Q  11 gaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaaccc 97  Q
    ||||||||||||| | ||||| |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  4484501 gaacaagacactcaatgatttacactcacc-aaggtgtttacaatgtttcccaacccaagagaagctctaatcaaagaccctaaaccc 4484587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13121777 - 13121703
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaa 74  Q
    ||||||||||||||||||||||| | ||||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  13121777 tctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttacaaatgtttcccaacccaagagaa 13121703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 11067311 - 11067248
Alignment:
Q  3 tcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacc 66  Q
    ||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  11067311 tcaccaatgaataagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacc 11067248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 32289567 - 32289484
Alignment:
Q  14 caagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaaccc 97  Q
    |||||||||| | |||||||||||||| ||||||||||| |||||||| |||||||||||| |||||||||||||| || |||||    
T  32289567 caagacactcaatgattttcactcacc-aaggtgtttaccatgtttccaaacccaagagaagctctaatcaaagactctaaaccc 32289484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17450599 - 17450550
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgttt 50  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  17450599 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgttt 17450550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 30833352 - 30833257
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccctcaaccc 97  Q
    ||||||||| ||||||||||||| | ||||| |||||||| ||| |||||||||||||||| ||||||||| || ||||||||||| ||||| |||||    
T  30833352 tctcaccaa-gaacaagacactcaatgatttacactcaccaaag-tgtttacaatgtttcccaacccaagataagctctaatcaaaaaccctaaaccc 30833257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 8390015 - 8389940
Alignment:
Q  40 ccaaggtgtttacaatgtttcctaacccaagagaac-tctaatcaaagaccctcaacccgaaagttctctcctttg 114  Q
    |||||||||||||||||||||||||||||||||| | ||    |||||||||||||||| |||||| |||||||||    
T  8390015 ccaaggtgtttacaatgtttcctaacccaagagatcatcactacaaagaccctcaaccctaaagttatctcctttg 8389940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 45726937 - 45726871
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaa-tgtttcctaaccc 67  Q
    ||||||||||||| ||||||||| | ||||||||||| |||||||||||||||| |||||||||||||    
T  45726937 tctcaccaatgaataagacactc-atgattttcactctcccaaggtgtttacaattgtttcctaaccc 45726871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11049558 - 11049484
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaa 74  Q
    |||||||||  |||||||||||| | |||||||||| ||||||||||||||| ||||||||| ||| ||||||||    
T  11049558 tctcaccaaaaaacaagacactcaatgattttcacttacccaaggtgtttacaaatgtttcccaacacaagagaa 11049484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35447044 - 35447097
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  35447044 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 35447097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 7815433 - 7815508
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaagagaac 75  Q
    ||||||||||||||||||||| | | ||||||||| |||| ||||||||||| ||||||||  ||||||| |||||    
T  7815433 tctcaccaatgaacaagacacgcaatgattttcacccacctaaggtgtttacaaatgtttctcaacccaatagaac 7815508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1631892 - 1631945
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| | |||||||||||||||    
T  1631892 tctcaccaatgaacaagacactc-atgattttcactctctcaaggtgtttacaat 1631945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42288270 - 42288323
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||| ||||||||||||  ||||||||||| |||||||||||||||||    
T  42288270 tctcaccaatgcacaagacactcgt-gattttcactctcccaaggtgtttacaat 42288323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5700282 - 5700403
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttac-aatgtttcctaacccaa-gagaactctaatcaaagaccctcaacccg 98  Q
    |||| |||||||||||||||||| | | |||||| |||||||| |||||||| ||||||||  ||||||| ||||||  | || || || |||||||||     
T  5700282 tctctccaatgaacaagacactcaatgtttttcattcacccaaagtgtttacaaatgtttctcaacccaacgagaaccatcattaatgatcctcaaccct 5700381  T
Q  99 aaagttctctcctttgatttcc 120  Q
    ||||||  ||||||| ||||||    
T  5700382 aaagttacctcctttaatttcc 5700403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 17865434 - 17865511
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaactctaat-caaagaccctcaacccgaaagttctctcctttg 114  Q
    |||||||||||||||||||||||| ||||||||||| ||  | | ||||||| |||||||| ||||||  ||||||||    
T  17865434 acccaaggtgtttacaatgtttcccaacccaagagatcttcactacaaagacactcaaccctaaagttacctcctttg 17865511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 75
Target Start/End: Complemental strand, 15903756 - 15903721
Alignment:
Q  40 ccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||| |||||||||||||||||||||||||||||||    
T  15903756 ccaatgtgtttacaatgtttcctaacccaagagaac 15903721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 21630174 - 21630209
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  21630174 acccaaggtgtttacaatgtttcccaacccaagaga 21630209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 23078339 - 23078304
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  23078339 acccaaggtgtttacaatgtttcccaacccaagaga 23078304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 34389080 - 34389115
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  34389080 acccaaggtgtttacaatgtttcccaacccaagaga 34389115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 36757630 - 36757595
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  36757630 acccaaggtgtttacaatgtttcccaacccaagaga 36757595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 36773481 - 36773438
Alignment:
Q  77 ctaatcaaagaccctcaacccgaaagttctctcctttgatttcc 120  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||    
T  36773481 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcc 36773438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 39483162 - 39483237
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga-actctaatcaaagaccctcaacccgaaagttctctcctt 112  Q
    |||||||||||||||||| ||||| |||||||||||  |||  | ||||||| |||||||| |||||| |||||||    
T  39483162 acccaaggtgtttacaatatttcccaacccaagagatcctcacaacaaagacactcaaccctaaagttatctcctt 39483237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 40739063 - 40739098
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  40739063 acccaaggtgtttacaatgtttcccaacccaagaga 40739098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 17490302 - 17490376
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    ||||| |||||||||||||| || | ||||||||| ||||||  |||||| |||||||| | ||| |||||||||    
T  17490302 tctcaacaatgaacaagacattcaatgattttcacccacccactgtgtttgcaatgttttccaactcaagagaac 17490376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 10445335 - 10445298
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  10445335 acccaaggtgtttacaatgtttcccaacccgagagaac 10445298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 41586419 - 41586351
Alignment:
Q  38 acccaaggtgtttacaa-tgtttcctaacccaagagaa-ctctaatcaaagaccctcaacccgaaagtt 104  Q
    ||||||||||||||||| ||||| | |||||||||||| |||| | ||||||| |||||||| ||||||    
T  41586419 acccaaggtgtttacaactgttttccaacccaagagaagctctcaccaaagacactcaaccctaaagtt 41586351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 20575 - 20694
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||| || | |||| | ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||| ||    
T  20575 tctcaccaatgaataataaactcaatgattttcactcacccaaggtgtttacaatgtctcccaacccaagataactctaatcaaagaccctcaaccctaa 20674  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  20675 agttacctcctttgatttcc 20694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 72; Significance: 9e-33; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 149257 - 149376
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    |||||| |||||||||||||||| | ||||||||||  ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||  |    
T  149257 tctcacaaatgaacaagacactcaatgattttcactaccccaaggtgtttacaatgtttctcaacctaagagaactctaatcaaagaccctcaacccaca 149356  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||  ||||||||||||||    
T  149357 agttacctcctttgatttcc 149376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 133147 - 133112
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga 73  Q
    |||||||||||||||||||||||| |||||||||||    
T  133147 acccaaggtgtttacaatgtttcccaacccaagaga 133112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 2726 - 2758
Alignment:
Q  41 caaggtgtttacaatgtttcctaacccaagaga 73  Q
    ||||||||||||||||||||| |||||||||||    
T  2726 caaggtgtttacaatgtttcccaacccaagaga 2758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 923 - 822
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  923 tctcaccaa-gaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaa 826  T
Q  101 agtt 104  Q
    ||||    
T  825 agtt 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 434540 - 434422
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaactctaatcaaagaccctcaacccgaa 100  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||| ||||| |||||| | ||||||||||||||||||||||||||||| ||||| ||    
T  434540 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtatttaccatgttttccaacccaagagaactctaatcaaagaccctaaaccctaa 434442  T
Q  101 agttctctcctttgatttcc 120  Q
    ||||   |||||||||||||    
T  434441 agttgcttcctttgatttcc 434422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 114610 - 114537
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaac 75  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| |||||||||||||    
T  114610 tctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaatgtttcccaacccaagagaac 114537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 119
Target Start/End: Complemental strand, 114522 - 114480
Alignment:
Q  77 ctaatcaaagaccctcaacccgaaagttctctcctttgatttc 119  Q
    ||||||||||||||||||||| ||||||  |||||||||||||    
T  114522 ctaatcaaagaccctcaaccctaaagttacctcctttgatttc 114480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11323 - 11410
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagacc 89  Q
    ||||||||| ||||||||||||| | ||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||    
T  11323 tctcaccaa-gaacaagacactcaatgatttacactcacc-aaggtgtttacaatgtttcccaacccaagagaagctctaatcaaagacc 11410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 8897 - 8986
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcctaacccaagagaa-ctctaatcaaagaccct 91  Q
    ||||||||| ||||||||||||| | | ||| |||||||| ||||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  8897 tctcaccaa-gaacaagacactcaatggtttacactcacc-aaggtctttacaatgtttcccaacccaagagaagctctaatcaaagaccct 8986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11565 - 11506
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaatgtttcc 61  Q
    ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  11565 tctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttacaatgtttcc 11506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7335 - 7282
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  7335 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaat 7282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 8285 - 8208
Alignment:
Q  38 acccaaggtgtttacaatgtttcctaacccaagaga-actctaatcaaagaccctcaacccgaaagttctctcctttg 114  Q
    |||||||||||||||||||||||| |||||||||||  |||    ||||||| |||||||| ||||||| ||||||||    
T  8285 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttccctcctttg 8208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 80443 - 80507
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaa-tgtttcctaac 65  Q
    ||||| ||||||||||||||||| | ||||||||||| ||||||||||| |||| |||||||||||    
T  80443 tctcagcaatgaacaagacactc-atgattttcactctcccaaggtgttcacaattgtttcctaac 80507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 19125 - 19191
Alignment:
Q  27 gattttcactcacccaaggtgtttacaa-tgtttcctaacccaagagaactctaatcaaagaccctca 93  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||||||||| || | ||||||| ||||    
T  19125 gattttcactcacccaag-tgtttacaaatgtttcccaacccaagagaaccctcaccaaagactctca 19191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18163 - 18216
Alignment:
Q  1 tctcaccaatgaacaagacactcgacgattttcactcacccaaggtgtttacaat 55  Q
    |||||||||||||||| |||||| | ||||||||||| ||||| |||||||||||    
T  18163 tctcaccaatgaacaaaacactc-atgattttcactctcccaaagtgtttacaat 18216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University