View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9779_low_54 (Length: 273)
Name: NF9779_low_54
Description: NF9779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9779_low_54 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 15 - 259
Target Start/End: Original strand, 2686244 - 2686488
Alignment:
| Q |
15 |
gatgaattgagaagtactatgtttccattgtcaccgattttgaggtgactattggttgaattttgaagagggttgtctctgtttgcgacccaaacaatcg |
114 |
Q |
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| T |
2686244 |
gatgaattgagaagtactatgtttccattgtcaccgattttgaggtgactattggttgaattttgaagagggttgtctctgtttgcgacccaaacaacag |
2686343 |
T |
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| Q |
115 |
tgtcttcgatgtttttgtaccatatggctaagtaaatgttgttggaatttgttccggggatgaaaccaagaacaaatgtttggttgggtgattcaagggt |
214 |
Q |
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| T |
2686344 |
tgtcttcgatgtttttgtaccatatggctaagtaaatgttgttggaatttgttccggggatgaaaccaagaacaaatgtttggttgggtgattcaagggt |
2686443 |
T |
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| Q |
215 |
ctgatttgtgaatagtatttgtgatgaggttaaggtgtctgtgat |
259 |
Q |
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| T |
2686444 |
ctgatttgtcaatagaatttgtgatgaggttaaggtgtctgtgat |
2686488 |
T |
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