View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9780_low_16 (Length: 275)

Name: NF9780_low_16
Description: NF9780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9780_low_16
NF9780_low_16
[»] chr1 (49 HSPs)
chr1 (71-255)||(34945293-34945475)
chr1 (1-44)||(43196098-43196141)
chr1 (1-43)||(2257703-2257745)
chr1 (1-43)||(7203853-7203895)
chr1 (1-43)||(9445128-9445170)
chr1 (1-43)||(39815366-39815408)
chr1 (1-43)||(49189217-49189259)
chr1 (1-34)||(21441665-21441698)
chr1 (1-34)||(21728243-21728276)
chr1 (1-34)||(24611873-24611906)
chr1 (1-34)||(27810256-27810289)
chr1 (1-33)||(33422228-33422260)
chr1 (1-33)||(39010844-39010876)
chr1 (1-33)||(50017432-50017464)
chr1 (1-33)||(50141944-50141976)
chr1 (1-33)||(52417561-52417593)
chr1 (2-33)||(50226889-50226920)
chr1 (1-31)||(366689-366719)
chr1 (5-43)||(18541064-18541102)
chr1 (1-43)||(18959024-18959066)
chr1 (1-43)||(30530583-30530625)
chr1 (1-31)||(30631852-30631882)
chr1 (1-43)||(43056736-43056778)
chr1 (1-35)||(45272169-45272203)
chr1 (5-42)||(1156500-1156537)
chr1 (1-34)||(3606103-3606136)
chr1 (1-30)||(4154614-4154643)
chr1 (1-30)||(5975570-5975599)
chr1 (1-34)||(44672039-44672072)
chr1 (1-42)||(47113295-47113336)
chr1 (5-33)||(5368054-5368082)
chr1 (1-33)||(5383789-5383821)
chr1 (1-33)||(5959418-5959450)
chr1 (1-33)||(7645560-7645592)
chr1 (1-33)||(8464522-8464554)
chr1 (1-33)||(15061875-15061907)
chr1 (1-33)||(16658468-16658500)
chr1 (1-33)||(18610803-18610835)
chr1 (3-43)||(26501315-26501355)
chr1 (1-33)||(28253045-28253077)
chr1 (1-45)||(29154799-29154843)
chr1 (1-33)||(30530408-30530440)
chr1 (1-33)||(31436850-31436882)
chr1 (1-33)||(36690581-36690613)
chr1 (1-33)||(36706682-36706714)
chr1 (1-33)||(37843441-37843473)
chr1 (1-33)||(44112484-44112516)
chr1 (1-33)||(44641912-44641944)
chr1 (1-33)||(49596265-49596297)
[»] chr4 (60 HSPs)
chr4 (1-44)||(48722088-48722131)
chr4 (1-44)||(49768878-49768921)
chr4 (1-43)||(29513705-29513747)
chr4 (1-43)||(51224847-51224889)
chr4 (1-43)||(56025276-56025318)
chr4 (1-40)||(49424829-49424868)
chr4 (1-43)||(1562545-1562587)
chr4 (1-43)||(36081819-36081861)
chr4 (1-43)||(45286124-45286166)
chr4 (1-34)||(12241087-12241120)
chr4 (1-42)||(31048909-31048950)
chr4 (1-34)||(33820345-33820378)
chr4 (1-34)||(39881039-39881072)
chr4 (1-34)||(55595978-55596011)
chr4 (1-33)||(17363260-17363292)
chr4 (1-33)||(25523207-25523239)
chr4 (1-33)||(31275176-31275208)
chr4 (1-44)||(37514140-37514184)
chr4 (1-33)||(45274295-45274327)
chr4 (1-33)||(46794510-46794542)
chr4 (1-41)||(46844250-46844290)
chr4 (1-33)||(46911928-46911960)
chr4 (3-43)||(47998614-47998654)
chr4 (1-33)||(53583137-53583169)
chr4 (2-42)||(53763821-53763861)
chr4 (1-44)||(47519729-47519772)
chr4 (1-44)||(52911798-52911841)
chr4 (1-42)||(3078916-3078958)
chr4 (5-43)||(6239400-6239438)
chr4 (1-43)||(39010146-39010188)
chr4 (1-35)||(42490937-42490971)
chr4 (1-39)||(44165933-44165971)
chr4 (1-34)||(149296-149329)
chr4 (1-41)||(18882983-18883024)
chr4 (1-34)||(22920280-22920313)
chr4 (1-34)||(22971486-22971519)
chr4 (1-34)||(25725703-25725736)
chr4 (1-34)||(36512871-36512904)
chr4 (1-34)||(36812412-36812445)
chr4 (1-41)||(42815426-42815467)
chr4 (1-34)||(43358642-43358675)
chr4 (1-34)||(53357086-53357119)
chr4 (1-33)||(1688437-1688469)
chr4 (5-33)||(2812606-2812634)
chr4 (1-33)||(4514274-4514306)
chr4 (1-33)||(4896509-4896541)
chr4 (1-33)||(11064098-11064130)
chr4 (1-33)||(18874931-18874963)
chr4 (1-33)||(24772701-24772733)
chr4 (1-33)||(29525888-29525920)
chr4 (1-33)||(29531615-29531647)
chr4 (1-33)||(34116549-34116581)
chr4 (1-41)||(37869787-37869827)
chr4 (1-33)||(38952719-38952751)
chr4 (1-33)||(45277090-45277122)
chr4 (1-33)||(46566959-46566991)
chr4 (1-33)||(51296198-51296230)
chr4 (1-33)||(52392234-52392266)
chr4 (1-33)||(55927014-55927046)
chr4 (1-33)||(56379422-56379454)
[»] chr3 (52 HSPs)
chr3 (1-44)||(30805612-30805655)
chr3 (1-43)||(41877708-41877750)
chr3 (1-43)||(7949811-7949853)
chr3 (1-43)||(47056535-47056577)
chr3 (1-34)||(47988494-47988527)
chr3 (1-34)||(47997781-47997814)
chr3 (1-34)||(48007068-48007101)
chr3 (1-34)||(48649609-48649642)
chr3 (1-33)||(622469-622501)
chr3 (1-33)||(6126484-6126516)
chr3 (1-33)||(8066385-8066417)
chr3 (1-33)||(26279914-26279946)
chr3 (2-34)||(32008062-32008094)
chr3 (1-33)||(37303083-37303115)
chr3 (1-33)||(43900766-43900798)
chr3 (1-33)||(44334810-44334842)
chr3 (1-43)||(29573364-29573407)
chr3 (1-32)||(37303414-37303445)
chr3 (1-43)||(462410-462452)
chr3 (5-43)||(11335315-11335353)
chr3 (1-43)||(14992093-14992135)
chr3 (1-43)||(27162478-27162520)
chr3 (1-42)||(27718794-27718836)
chr3 (1-43)||(39604255-39604297)
chr3 (5-43)||(40478300-40478338)
chr3 (1-43)||(51032633-51032675)
chr3 (1-41)||(14207266-14207307)
chr3 (1-41)||(14215014-14215055)
chr3 (1-34)||(31017403-31017436)
chr3 (1-30)||(35554124-35554153)
chr3 (1-34)||(40159847-40159880)
chr3 (1-41)||(46019484-46019525)
chr3 (1-33)||(7223-7255)
chr3 (1-33)||(108461-108493)
chr3 (1-33)||(1901935-1901967)
chr3 (1-33)||(1911381-1911413)
chr3 (1-33)||(11173488-11173520)
chr3 (1-33)||(20380898-20380930)
chr3 (1-29)||(22153898-22153926)
chr3 (1-33)||(31300832-31300864)
chr3 (1-33)||(32457764-32457796)
chr3 (1-33)||(32656005-32656037)
chr3 (1-33)||(32981130-32981162)
chr3 (1-33)||(33007390-33007422)
chr3 (1-33)||(35425681-35425713)
chr3 (1-33)||(36442246-36442278)
chr3 (1-33)||(36869846-36869878)
chr3 (1-33)||(39540265-39540297)
chr3 (1-33)||(45150275-45150307)
chr3 (1-44)||(48353015-48353059)
chr3 (1-33)||(51406378-51406410)
chr3 (1-33)||(51464281-51464313)
[»] chr8 (41 HSPs)
chr8 (1-43)||(29509286-29509328)
chr8 (5-44)||(11114682-11114721)
chr8 (1-40)||(34970230-34970269)
chr8 (1-43)||(8888272-8888314)
chr8 (1-43)||(43587661-43587703)
chr8 (1-34)||(9550416-9550449)
chr8 (1-34)||(12659081-12659114)
chr8 (1-33)||(6105445-6105477)
chr8 (1-33)||(11879499-11879531)
chr8 (1-33)||(11896915-11896947)
chr8 (1-33)||(37210058-37210090)
chr8 (1-33)||(45101426-45101458)
chr8 (3-42)||(24116061-24116100)
chr8 (1-31)||(5642399-5642429)
chr8 (1-31)||(5644340-5644370)
chr8 (1-43)||(9048325-9048367)
chr8 (1-43)||(16808601-16808643)
chr8 (1-43)||(35818957-35818999)
chr8 (1-43)||(35937521-35937563)
chr8 (1-43)||(38504190-38504232)
chr8 (3-33)||(40102053-40102083)
chr8 (1-31)||(42012599-42012629)
chr8 (5-43)||(42131016-42131054)
chr8 (1-34)||(9431294-9431327)
chr8 (1-41)||(41159897-41159938)
chr8 (1-33)||(426131-426163)
chr8 (1-33)||(3756931-3756963)
chr8 (1-44)||(3946259-3946303)
chr8 (4-44)||(11223871-11223911)
chr8 (1-33)||(12045662-12045694)
chr8 (1-33)||(13884169-13884201)
chr8 (1-33)||(21418601-21418633)
chr8 (1-33)||(21648940-21648972)
chr8 (1-33)||(22767162-22767194)
chr8 (1-33)||(24946032-24946064)
chr8 (1-33)||(27630927-27630959)
chr8 (1-33)||(32174984-32175016)
chr8 (5-33)||(35633982-35634010)
chr8 (5-33)||(35967419-35967447)
chr8 (1-33)||(42443134-42443166)
chr8 (2-30)||(42658667-42658695)
[»] chr6 (18 HSPs)
chr6 (1-43)||(25924873-25924915)
chr6 (1-43)||(28965849-28965891)
chr6 (1-34)||(14094940-14094973)
chr6 (1-34)||(17835641-17835674)
chr6 (1-33)||(8395372-8395404)
chr6 (1-33)||(19789085-19789117)
chr6 (1-33)||(21506366-21506398)
chr6 (1-33)||(29383587-29383619)
chr6 (1-43)||(8778881-8778923)
chr6 (3-33)||(9954578-9954608)
chr6 (1-31)||(23633332-23633362)
chr6 (1-30)||(237407-237436)
chr6 (1-42)||(15722512-15722553)
chr6 (1-33)||(3800594-3800626)
chr6 (1-33)||(12044362-12044394)
chr6 (1-33)||(18792441-18792473)
chr6 (1-33)||(30906672-30906704)
chr6 (1-33)||(32853153-32853185)
[»] chr7 (32 HSPs)
chr7 (1-41)||(1790013-1790053)
chr7 (1-43)||(19426600-19426642)
chr7 (1-43)||(42060676-42060718)
chr7 (1-34)||(9055296-9055329)
chr7 (1-33)||(5378657-5378689)
chr7 (1-43)||(1471299-1471342)
chr7 (1-39)||(2790201-2790239)
chr7 (5-43)||(16645692-16645730)
chr7 (5-43)||(17620053-17620091)
chr7 (3-33)||(29609875-29609905)
chr7 (1-43)||(32258306-32258348)
chr7 (1-34)||(2756938-2756971)
chr7 (1-34)||(21037243-21037276)
chr7 (1-42)||(24700142-24700183)
chr7 (1-34)||(30769670-30769703)
chr7 (3-32)||(30832917-30832946)
chr7 (1-30)||(41254809-41254838)
chr7 (1-34)||(41815174-41815207)
chr7 (1-41)||(44184567-44184608)
chr7 (1-33)||(5724068-5724100)
chr7 (1-33)||(7077762-7077794)
chr7 (1-33)||(20406571-20406603)
chr7 (1-33)||(21752688-21752720)
chr7 (3-31)||(23761091-23761119)
chr7 (1-33)||(24267656-24267688)
chr7 (5-33)||(28824533-28824561)
chr7 (1-33)||(33684710-33684742)
chr7 (1-33)||(34349036-34349068)
chr7 (1-41)||(41890549-41890589)
chr7 (1-33)||(45607054-45607086)
chr7 (1-33)||(46022491-46022523)
chr7 (1-33)||(48866939-48866971)
[»] chr2 (40 HSPs)
chr2 (1-41)||(6851668-6851708)
chr2 (1-43)||(31635819-31635861)
chr2 (1-34)||(14797659-14797692)
chr2 (1-34)||(41868378-41868411)
chr2 (1-33)||(7086133-7086165)
chr2 (1-33)||(7498000-7498032)
chr2 (1-41)||(27540037-27540077)
chr2 (3-43)||(30413737-30413777)
chr2 (1-33)||(42665821-42665853)
chr2 (5-44)||(5606593-5606632)
chr2 (1-43)||(4723586-4723628)
chr2 (1-43)||(6639481-6639523)
chr2 (1-31)||(23045122-23045152)
chr2 (3-32)||(13104510-13104539)
chr2 (1-34)||(23358588-23358621)
chr2 (1-41)||(28245750-28245791)
chr2 (1-30)||(30996761-30996790)
chr2 (1-34)||(33857246-33857279)
chr2 (3-43)||(34134781-34134822)
chr2 (1-30)||(40496383-40496412)
chr2 (1-30)||(42081070-42081099)
chr2 (1-34)||(43356318-43356351)
chr2 (1-33)||(546394-546426)
chr2 (1-33)||(1889177-1889209)
chr2 (1-33)||(4842529-4842561)
chr2 (1-44)||(9194448-9194492)
chr2 (1-33)||(11229330-11229362)
chr2 (1-33)||(11442702-11442734)
chr2 (1-41)||(12175337-12175377)
chr2 (1-33)||(18619406-18619438)
chr2 (1-33)||(23880125-23880157)
chr2 (1-33)||(24361521-24361553)
chr2 (1-33)||(30856837-30856869)
chr2 (1-44)||(30977908-30977952)
chr2 (1-33)||(32688553-32688585)
chr2 (1-33)||(34249610-34249642)
chr2 (1-33)||(36587477-36587509)
chr2 (1-33)||(42141603-42141635)
chr2 (1-33)||(42554806-42554838)
chr2 (5-33)||(43650562-43650590)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-43)||(16995-17037)
[»] chr5 (40 HSPs)
chr5 (1-43)||(31708390-31708432)
chr5 (1-34)||(6046342-6046375)
chr5 (1-33)||(21023328-21023360)
chr5 (1-33)||(34381042-34381074)
chr5 (1-33)||(39595302-39595334)
chr5 (1-33)||(40223794-40223826)
chr5 (1-41)||(41192609-41192649)
chr5 (1-43)||(18695338-18695381)
chr5 (1-44)||(26660420-26660463)
chr5 (1-44)||(26932012-26932055)
chr5 (1-35)||(2117633-2117667)
chr5 (1-39)||(4985593-4985631)
chr5 (1-39)||(12401216-12401254)
chr5 (1-43)||(19271879-19271921)
chr5 (1-43)||(22920501-22920543)
chr5 (3-41)||(31006081-31006119)
chr5 (1-43)||(36548389-36548431)
chr5 (1-43)||(36786267-36786309)
chr5 (1-41)||(6446526-6446567)
chr5 (1-34)||(11880996-11881029)
chr5 (1-42)||(16553525-16553566)
chr5 (1-34)||(22647570-22647603)
chr5 (1-34)||(31329135-31329168)
chr5 (1-34)||(32873158-32873191)
chr5 (1-33)||(91245-91277)
chr5 (1-33)||(471844-471876)
chr5 (1-33)||(1774292-1774324)
chr5 (1-44)||(8920097-8920141)
chr5 (1-33)||(12661956-12661988)
chr5 (1-33)||(12779615-12779647)
chr5 (1-33)||(18449291-18449323)
chr5 (1-33)||(19376141-19376173)
chr5 (1-33)||(20591483-20591515)
chr5 (1-33)||(24431627-24431659)
chr5 (1-33)||(28904021-28904053)
chr5 (1-33)||(28940416-28940448)
chr5 (1-33)||(36713187-36713219)
chr5 (1-33)||(39788715-39788747)
chr5 (1-33)||(39840718-39840750)
chr5 (1-33)||(42909749-42909781)
[»] scaffold0060 (1 HSPs)
scaffold0060 (1-33)||(6847-6879)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-44)||(27358-27401)
[»] scaffold0532 (1 HSPs)
scaffold0532 (1-44)||(10983-11027)
[»] scaffold0511 (1 HSPs)
scaffold0511 (1-33)||(11668-11700)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-33)||(34438-34470)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-33)||(155936-155968)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-33)||(199296-199328)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-33)||(6457-6489)
scaffold0002 (1-33)||(440748-440780)


Alignment Details
Target: chr1 (Bit Score: 138; Significance: 3e-72; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 71 - 255
Target Start/End: Complemental strand, 34945475 - 34945293
Alignment:
Q  71 tttcttttataccaaagcatcggagtgaatccttcgccattgaaaataatctagtactatattttgtggtagttgtatcctcatccttatgtacactccc 170  Q
    |||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||  |||||||| |||||||||||| |||||||||||||||     
T  34945475 tttcttttataccaaaccactggagtgaatccttcaccattgaaaataatctagtactat--tttgtggtggttgtatcctcacccttatgtacactcct 34945378  T
Q  171 ttctctcctttttaatgttaaacacacactctctcatgttcatggagggcaacaacaattccacatgagaataaataatgggaga 255  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34945377 ttttctcctttttaatgttaaacacacactctctcatgttcatggagggcaaccacaattccacatgagaataaataatgggaga 34945293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43196098 - 43196141
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgga 44  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||    
T  43196098 tgagtatgagagagaaaattgtcaaaaagttgtagcaaaatgga 43196141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2257703 - 2257745
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||| |||||||||| |||||||||    
T  2257703 tgagtatgagagagaaagttgttaaaaagttgtagcaaaatgg 2257745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7203853 - 7203895
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||| |||| ||||||||||||||    
T  7203853 tgagtatgagagagaaagttgtctaaaaattgttgcaaaatgg 7203895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9445170 - 9445128
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||| |||||||||||||||||||||||| ||||||||    
T  9445170 tgagtatgaaagagaaagttgtcaaaaagttgttacaaaatgg 9445128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39815408 - 39815366
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||| ||||||||| |||||||||    
T  39815408 tgagtatgagagagaaagttgtccaaaagttgtagcaaaatgg 39815366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 49189217 - 49189259
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||| ||||||||||||||||||||| |||||||||    
T  49189217 tgagtatgagaaagaaagttgtcaaaaagttgtagcaaaatgg 49189259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21441698 - 21441665
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  21441698 tgagtatgagagagaaagttgtcaaaaagttgtt 21441665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 21728243 - 21728276
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  21728243 tgagtatgagagagaaagttgtcaaaaagttgtt 21728276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 24611906 - 24611873
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  24611906 tgagtatgagagagaaagttgtcaaaaagttgtt 24611873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 27810256 - 27810289
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  27810256 tgagtatgagagagaaagttgtcaaaaagttgtt 27810289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 33422228 - 33422260
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  33422228 tgagtatgagagagaaagttgtcaaaaagttgt 33422260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39010876 - 39010844
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  39010876 tgagtatgagagagaaagttgtcaaaaagttgt 39010844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 50017432 - 50017464
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  50017432 tgagtatgagagagaaagttgtcaaaaagttgt 50017464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 50141944 - 50141976
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  50141944 tgagtatgagagagaaagttgtcaaaaagttgt 50141976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 52417593 - 52417561
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  52417593 tgagtatgagagagaaagttgtcaaaaagttgt 52417561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 33
Target Start/End: Original strand, 50226889 - 50226920
Alignment:
Q  2 gagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||||||||||||    
T  50226889 gagtatgagagagaaagttgtcaaaaagttgt 50226920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 366719 - 366689
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagtt 31  Q
    |||||||||||||||||||||||||||||||    
T  366719 tgagtatgagagagaaagttgtcaaaaagtt 366689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 18541064 - 18541102
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  18541064 tatgagagagaaagttgtcaaaaagttgttagaaaatgg 18541102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18959066 - 18959024
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||| |||||||||||||||  ||||||||    
T  18959066 tgagtatgagagagaaaattgtcaaaaagttgtaacaaaatgg 18959024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30530583 - 30530625
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||| |||||||||  ||||||||    
T  30530583 tgagtatgagagagaaagttgtctaaaagttgtcacaaaatgg 30530625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 30631852 - 30631882
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagtt 31  Q
    |||||||||||||||||||||||||||||||    
T  30631852 tgagtatgagagagaaagttgtcaaaaagtt 30631882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43056778 - 43056736
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||| |||| || |||||||||||    
T  43056778 tgagtatgagagagaaagttgtccaaaaattattgcaaaatgg 43056736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 45272169 - 45272203
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttg 35  Q
    |||||||||||||||||||||||||||||| ||||    
T  45272169 tgagtatgagagagaaagttgtcaaaaagtggttg 45272203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 1156537 - 1156500
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgttgcaaaatg 42  Q
    |||||||||||||||||||||||| || ||||||||||    
T  1156537 tatgagagagaaagttgtcaaaaaattattgcaaaatg 1156500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 3606103 - 3606136
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  3606103 tgagtatgatagagaaagttgtcaaaaagttgtt 3606136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 4154643 - 4154614
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagt 30  Q
    ||||||||||||||||||||||||||||||    
T  4154643 tgagtatgagagagaaagttgtcaaaaagt 4154614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 5975599 - 5975570
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagt 30  Q
    ||||||||||||||||||||||||||||||    
T  5975599 tgagtatgagagagaaagttgtcaaaaagt 5975570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 44672039 - 44672072
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  44672039 tgagtatgagagagaaaattgtcaaaaagttgtt 44672072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 47113336 - 47113295
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatg 42  Q
    ||||||||||||||||||||||| |||| || ||||||||||    
T  47113336 tgagtatgagagagaaagttgtccaaaaattattgcaaaatg 47113295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 33
Target Start/End: Original strand, 5368054 - 5368082
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||    
T  5368054 tatgagagagaaagttgtcaaaaagttgt 5368082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5383821 - 5383789
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||| |||||||||||||||||||    
T  5383821 tgagtatgagagaaaaagttgtcaaaaagttgt 5383789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5959450 - 5959418
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  5959450 tgagtatgagagagaaagttgtccaaaagttgt 5959418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7645560 - 7645592
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||| |||||||||||||||||||    
T  7645560 tgagtatgagagataaagttgtcaaaaagttgt 7645592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 8464522 - 8464554
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  8464522 tgagtatgagagagaaaattgtcaaaaagttgt 8464554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 15061907 - 15061875
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  15061907 tgagtatgagagagaaaattgtcaaaaagttgt 15061875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 16658500 - 16658468
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  16658500 tgagtatgagagagaaagttgtctaaaagttgt 16658468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 18610835 - 18610803
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  18610835 tgagtatgagagagaaagttgtaaaaaagttgt 18610803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 26501355 - 26501315
Alignment:
Q  3 agtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||| ||||||| || ||||||||    
T  26501355 agtatgagagagaaagttgtccaaaagttattacaaaatgg 26501315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28253077 - 28253045
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  28253077 tgagtatgagagagaaaattgtcaaaaagttgt 28253045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29154843 - 29154799
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatggaa 45  Q
    |||||||||||||||||||||||| |||||| ||  |||||||||    
T  29154843 tgagtatgagagagaaagttgtcacaaagttattaaaaaatggaa 29154799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30530408 - 30530440
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  30530408 tgagtatgagagagaaagttgttaaaaagttgt 30530440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 31436882 - 31436850
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  31436882 tgagtatgagagagaaaattgtcaaaaagttgt 31436850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36690581 - 36690613
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  36690581 tgagtatgagagagaaagttgtcaaaaaattgt 36690613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36706682 - 36706714
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  36706682 tgagtatgagagagaaagttgtcaaaaaattgt 36706714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 37843441 - 37843473
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  37843441 tgagtatgagagagaaagttgtcacaaagttgt 37843473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 44112516 - 44112484
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  44112516 tgagtatgagagagaaagttgtcaaaaaattgt 44112484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 44641912 - 44641944
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  44641912 tgagtatgagagagaaagttgtcaaaaaattgt 44641944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 49596297 - 49596265
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  49596297 tgagtatgagagagaaagttgtcaaaaaattgt 49596265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48722131 - 48722088
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgga 44  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  48722131 tgagtatgagagagaaaattgtcaaaaagttgttgcaaaatgga 48722088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 49768878 - 49768921
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgga 44  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  49768878 tgagtatgagagagaaagttgtcaaaaaattgttgcaaaatgga 49768921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29513705 - 29513747
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  29513705 tgagtatgagagagaaagttgtcaaaaagttgtagcaaaatgg 29513747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 51224847 - 51224889
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  51224847 tgagtatgagagagaaagttgtcaaaaagttgtagcaaaatgg 51224889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 56025318 - 56025276
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  56025318 tgagtatgagagagaaagttgtcaaaaagttgtagcaaaatgg 56025276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 49424829 - 49424868
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaa 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  49424829 tgagtatgagagagaaagttgtcaaaaagttgttacaaaa 49424868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1562545 - 1562587
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  1562545 tgagtatgagagagaaagttgtcaaaaagttgttagaaaatgg 1562587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 36081861 - 36081819
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||| ||||||||| |||||||||    
T  36081861 tgagtatgagagagaaagttgtccaaaagttgtagcaaaatgg 36081819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 45286124 - 45286166
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  45286124 tgagtatgagagagaaagttgtctgaaagttgttgcaaaatgg 45286166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12241120 - 12241087
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  12241120 tgagtatgagagagaaagttgtcaaaaagttgtt 12241087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31048950 - 31048909
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatg 42  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  31048950 tgagtatgagagagaaagttgtcaaaaagttgcagcaaaatg 31048909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 33820345 - 33820378
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  33820345 tgagtatgagagagaaagttgtcaaaaagttgtt 33820378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39881039 - 39881072
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  39881039 tgagtatgagagagaaagttgtcaaaaagttgtt 39881072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 55596011 - 55595978
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  55596011 tgagtatgagagagaaagttgtcaaaaagttgtt 55595978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17363292 - 17363260
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  17363292 tgagtatgagagagaaagttgtcaaaaagttgt 17363260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 25523207 - 25523239
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  25523207 tgagtatgagagagaaagttgtcaaaaagttgt 25523239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 31275208 - 31275176
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  31275208 tgagtatgagagagaaagttgtcaaaaagttgt 31275176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37514140 - 37514184
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaatgga 44  Q
    |||||||||||||||||||||||| |||||||||| |||||||||    
T  37514140 tgagtatgagagagaaagttgtcacaaaagttgttacaaaatgga 37514184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 45274327 - 45274295
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  45274327 tgagtatgagagagaaagttgtcaaaaagttgt 45274295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 46794510 - 46794542
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  46794510 tgagtatgagagagaaagttgtcaaaaagttgt 46794542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46844250 - 46844290
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaat 41  Q
    |||||||||||||||||||||||||||| ||||| ||||||    
T  46844250 tgagtatgagagagaaagttgtcaaaaaattgttacaaaat 46844290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 46911960 - 46911928
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  46911960 tgagtatgagagagaaagttgtcaaaaagttgt 46911928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 47998654 - 47998614
Alignment:
Q  3 agtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  47998654 agtatgagagaaaaagttgtcaaaaagttgttacaaaatgg 47998614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 53583137 - 53583169
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  53583137 tgagtatgagagagaaagttgtcaaaaagttgt 53583169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 53763821 - 53763861
Alignment:
Q  2 gagtatgagagagaaagttgtcaaaaagttgttgcaaaatg 42  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  53763821 gagtatgagagagaaagttgtccaaaagttgtagcaaaatg 53763861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 47519729 - 47519772
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgga 44  Q
    ||||||||||||||||||||||  |||||||||| |||||||||    
T  47519729 tgagtatgagagagaaagttgttcaaaagttgttacaaaatgga 47519772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 52911798 - 52911841
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgga 44  Q
    ||||||||||||||||| |||||||||| || ||||||||||||    
T  52911798 tgagtatgagagagaaaattgtcaaaaaattattgcaaaatgga 52911841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3078916 - 3078958
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaatg 42  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  3078916 tgagtatgagagagaaagttgtcacaaaagttgttacaaaatg 3078958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 6239438 - 6239400
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||||| || |||||||||||    
T  6239438 tatgagagagaaagttgtcaaaaaattattgcaaaatgg 6239400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39010146 - 39010188
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||| ||||||||||||||  ||||||||    
T  39010146 tgagtatgagagagaaagctgtcaaaaagttgtcacaaaatgg 39010188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 42490971 - 42490937
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttg 35  Q
    |||||||||||||||||||||||||||||| ||||    
T  42490971 tgagtatgagagagaaagttgtcaaaaagtggttg 42490937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44165971 - 44165933
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaa 39  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  44165971 tgagtatgagagagaaagttgtcaaaaaattgtcgcaaa 44165933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 149296 - 149329
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    |||||||||||||||||||||||||||| |||||    
T  149296 tgagtatgagagagaaagttgtcaaaaaattgtt 149329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18882983 - 18883024
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaat 41  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  18882983 tgagtatgagagagaaagttgtcacaaaagttgtagcaaaat 18883024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 22920280 - 22920313
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    |||||||||||||||||| |||||||||||||||    
T  22920280 tgagtatgagagagaaagatgtcaaaaagttgtt 22920313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 22971519 - 22971486
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    |||||||||||||||||| |||||||||||||||    
T  22971519 tgagtatgagagagaaagatgtcaaaaagttgtt 22971486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 25725703 - 25725736
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  25725703 tgagtatgaaagagaaagttgtcaaaaagttgtt 25725736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 36512904 - 36512871
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    |||||||||||||||| |||||||||||||||||    
T  36512904 tgagtatgagagagaaggttgtcaaaaagttgtt 36512871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36812412 - 36812445
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  36812412 tgagtatgagagagaaagttgtccaaaagttgtt 36812445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42815467 - 42815426
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaat 41  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  42815467 tgagtatgagagagaaagttgtcacaaaagttgttacaaaat 42815426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 43358675 - 43358642
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  43358675 tgagtatgagagagaaagttgtccaaaagttgtt 43358642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 53357086 - 53357119
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    |||||||||||||||||||||||||||| |||||    
T  53357086 tgagtatgagagagaaagttgtcaaaaaattgtt 53357119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 1688437 - 1688469
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  1688437 tgagtatgagagagaaagttgtaaaaaagttgt 1688469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 33
Target Start/End: Original strand, 2812606 - 2812634
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||    
T  2812606 tatgagagagaaagttgtcaaaaagttgt 2812634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4514274 - 4514306
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  4514274 tgagtatgagagagaaagttgtcaaaaaattgt 4514306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4896509 - 4896541
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||| ||||||||||||||||||||||||    
T  4896509 tgagtatgcgagagaaagttgtcaaaaagttgt 4896541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11064098 - 11064130
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||| ||||||||||||||||    
T  11064098 tgagtatgagagagaatgttgtcaaaaagttgt 11064130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18874931 - 18874963
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  18874931 tgagtatgagagagaaagttgtctaaaagttgt 18874963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 24772733 - 24772701
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||| ||||||||||||||||    
T  24772733 tgagtatgagagagaaggttgtcaaaaagttgt 24772701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29525920 - 29525888
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||| ||||||||||||    
T  29525920 tgagtatgagagagaaagttatcaaaaagttgt 29525888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 29531615 - 29531647
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  29531615 tgagtatgagagagaaagttgtcacaaagttgt 29531647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34116549 - 34116581
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  34116549 tgagtatgagagagaaaattgtcaaaaagttgt 34116581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37869787 - 37869827
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaat 41  Q
    ||||||||||||||||||||||| ||||||| || ||||||    
T  37869787 tgagtatgagagagaaagttgtctaaaagttattacaaaat 37869827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 38952751 - 38952719
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  38952751 tgagtatgagagagaaagttgtcaaaaaattgt 38952719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 45277090 - 45277122
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  45277090 tgagtatgagagagaaagttgtaaaaaagttgt 45277122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 46566991 - 46566959
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  46566991 tgagtatgagagagaaagttgtctaaaagttgt 46566959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 51296198 - 51296230
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||| ||||||||||||||||||||||||    
T  51296198 tgagtatgtgagagaaagttgtcaaaaagttgt 51296230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 52392234 - 52392266
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||| |||||||||||||||||||    
T  52392234 tgagtatgagagataaagttgtcaaaaagttgt 52392266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 55927046 - 55927014
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||| ||||||||||||||||    
T  55927046 tgagtatgagagagaaggttgtcaaaaagttgt 55927014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 56379454 - 56379422
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  56379454 tgagtatgagagagaaagttgtaaaaaagttgt 56379422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30805612 - 30805655
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgga 44  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  30805612 tgagtatgagagaggaagttgtcaaaaagttgttgcaaaatgga 30805655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41877750 - 41877708
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  41877750 tgagtatgagagagaaagttgtcaaaaagttgtagcaaaatgg 41877708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7949853 - 7949811
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||| ||||||||||||||||||||| |||||||||    
T  7949853 tgagtatgagaaagaaagttgtcaaaaagttgtagcaaaatgg 7949811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 47056535 - 47056577
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||| |||| ||||||||||||||    
T  47056535 tgagtatgagagagaaagttgtccaaaaattgttgcaaaatgg 47056577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 47988494 - 47988527
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  47988494 tgagtatgagagagaaagttgtcaaaaagttgtt 47988527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 47997781 - 47997814
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  47997781 tgagtatgagagagaaagttgtcaaaaagttgtt 47997814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 48007068 - 48007101
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  48007068 tgagtatgagagagaaagttgtcaaaaagttgtt 48007101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 48649642 - 48649609
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  48649642 tgagtatgagagagaaagttgtcaaaaagttgtt 48649609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 622469 - 622501
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  622469 tgagtatgagagagaaagttgtcaaaaagttgt 622501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6126516 - 6126484
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  6126516 tgagtatgagagagaaagttgtcaaaaagttgt 6126484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8066417 - 8066385
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  8066417 tgagtatgagagagaaagttgtcaaaaagttgt 8066385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 26279946 - 26279914
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  26279946 tgagtatgagagagaaagttgtcaaaaagttgt 26279914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 32008094 - 32008062
Alignment:
Q  2 gagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    |||||||||||||||||||||||||||||||||    
T  32008094 gagtatgagagagaaagttgtcaaaaagttgtt 32008062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 37303083 - 37303115
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  37303083 tgagtatgagagagaaagttgtcaaaaagttgt 37303115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 43900766 - 43900798
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  43900766 tgagtatgagagagaaagttgtcaaaaagttgt 43900798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 44334810 - 44334842
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  44334810 tgagtatgagagagaaagttgtcaaaaagttgt 44334842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29573364 - 29573407
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||||| |||||||||| ||||||||    
T  29573364 tgagtatgagagagaaagttgtcacaaaagttgttacaaaatgg 29573407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 37303445 - 37303414
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  37303445 tgagtatgagagagaaagttgtcaaaaagttg 37303414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 462410 - 462452
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||| |||||||||  ||||||||    
T  462410 tgagtatgagagagaaagttgtctaaaagttgtcacaaaatgg 462452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 11335315 - 11335353
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  11335315 tatgagagagaaagttgtcaaaaagttgttagaaaatgg 11335353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14992135 - 14992093
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||| ||||||| |||| |||||||||    
T  14992135 tgagtatgagagagaaagttatcaaaaaattgtagcaaaatgg 14992093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27162478 - 27162520
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||  |||||||||| ||||||||    
T  27162478 tgagtatgagagagaaagttgttcaaaagttgttacaaaatgg 27162520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 27718794 - 27718836
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaatg 42  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  27718794 tgagtatgagagagaaagttgtcacaaaagttgttacaaaatg 27718836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39604255 - 39604297
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||| ||||||||||||||||||||| |||||| |||||||    
T  39604255 tgagtaagagagagaaagttgtcaaaaaattgttgaaaaatgg 39604297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 40478300 - 40478338
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  40478300 tatgagatagaaagttgtcaaaaagttgtagcaaaatgg 40478338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 51032633 - 51032675
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||| ||||||||||||||||  |||||||    
T  51032633 tgagtatgagagagaaaattgtcaaaaagttgttagaaaatgg 51032675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14207266 - 14207307
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaat 41  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  14207266 tgagtatgagagagaaagttgtcacaaaagttgttacaaaat 14207307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14215014 - 14215055
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaat 41  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  14215014 tgagtatgagagagaaagttgtcacaaaagttgttacaaaat 14215055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31017403 - 31017436
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  31017403 tgagtatgagagagaaaattgtcaaaaagttgtt 31017436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 35554124 - 35554153
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagt 30  Q
    ||||||||||||||||||||||||||||||    
T  35554124 tgagtatgagagagaaagttgtcaaaaagt 35554153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 40159847 - 40159880
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  40159847 tgagtctgagagagaaagttgtcaaaaagttgtt 40159880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 46019525 - 46019484
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaat 41  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  46019525 tgagtatgagagagaaagttgtcacaaaagttgtcgcaaaat 46019484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7223 - 7255
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  7223 tgagtatgagagagaaagttgtccaaaagttgt 7255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 108493 - 108461
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  108493 tgagtatgagagagaaagttgtcaaaaaattgt 108461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 1901935 - 1901967
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  1901935 tgagtatgagagagaaagttgtctaaaagttgt 1901967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 1911381 - 1911413
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  1911381 tgagtatgagagagaaagttgtctaaaagttgt 1911413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11173520 - 11173488
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||| |||||||||||||||||||||    
T  11173520 tgagtatgagaaagaaagttgtcaaaaagttgt 11173488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 20380898 - 20380930
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||||| |||||||    
T  20380898 tgagtatgagagagaaagttgtcaagaagttgt 20380930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 22153926 - 22153898
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaag 29  Q
    |||||||||||||||||||||||||||||    
T  22153926 tgagtatgagagagaaagttgtcaaaaag 22153898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 31300864 - 31300832
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  31300864 tgagtatgagagagaaagttgtctaaaagttgt 31300832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 32457764 - 32457796
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  32457764 tgagtatgagagagaaagttgtcacaaagttgt 32457796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 32656037 - 32656005
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  32656037 tgagtatgagagagaaagttgtctaaaagttgt 32656005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 32981130 - 32981162
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  32981130 tgagtatgagagagaaagttgtctaaaagttgt 32981162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 33007422 - 33007390
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  33007422 tgagtatgagagagaaaattgtcaaaaagttgt 33007390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 35425681 - 35425713
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||| |||||||||||||||||||    
T  35425681 tgagtatgagagataaagttgtcaaaaagttgt 35425713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 36442278 - 36442246
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  36442278 tgagtatgagagagaaagttgtcaaaaaattgt 36442246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36869846 - 36869878
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  36869846 tgagtatgagagagaaagttgtctaaaagttgt 36869878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39540297 - 39540265
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  39540297 tgagtatgagagagaaaattgtcaaaaagttgt 39540265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 45150275 - 45150307
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  45150275 tgagtatgagagagaaagttgtctaaaagttgt 45150307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48353059 - 48353015
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaatgga 44  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||    
T  48353059 tgagtatgagagagaaagttgtcacaaaagttgttaaaaaatgga 48353015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 51406378 - 51406410
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  51406378 tgagtatgagagagaaagttgtcaaaaaattgt 51406410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 51464281 - 51464313
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||| |||||||||||||||||||    
T  51464281 tgagtatgagagataaagttgtcaaaaagttgt 51464313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29509328 - 29509286
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  29509328 tgagtatgagagagaaagttgtcaaaaagttgtagcaaaatgg 29509286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 11114682 - 11114721
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgttgcaaaatgga 44  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  11114682 tatgagagagaaagttgtcaaaaagttattgcaaaatgga 11114721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 34970269 - 34970230
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaa 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  34970269 tgagtatgagagagaaagttgtcaaaaagttgttacaaaa 34970230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8888314 - 8888272
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  8888314 tgagtatgagagagaaagttgtctgaaagttgttgcaaaatgg 8888272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43587703 - 43587661
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  43587703 tgagtatgagagagaaaattgtcaaaaagttgtagcaaaatgg 43587661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 9550416 - 9550449
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  9550416 tgagtatgagagagaaagttgtcaaaaagttgtt 9550449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12659114 - 12659081
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  12659114 tgagtatgagagagaaagttgtcaaaaagttgtt 12659081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 6105445 - 6105477
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  6105445 tgagtatgagagagaaagttgtcaaaaagttgt 6105477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11879499 - 11879531
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  11879499 tgagtatgagagagaaagttgtcaaaaagttgt 11879531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11896915 - 11896947
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  11896915 tgagtatgagagagaaagttgtcaaaaagttgt 11896947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 37210058 - 37210090
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  37210058 tgagtatgagagagaaagttgtcaaaaagttgt 37210090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 45101458 - 45101426
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  45101458 tgagtatgagagagaaagttgtcaaaaagttgt 45101426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 24116100 - 24116061
Alignment:
Q  3 agtatgagagagaaagttgtcaaaaagttgttgcaaaatg 42  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  24116100 agtatgagaaagaaagttgtcaaaaaattgttgcaaaatg 24116061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 5642399 - 5642429
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagtt 31  Q
    |||||||||||||||||||||||||||||||    
T  5642399 tgagtatgagagagaaagttgtcaaaaagtt 5642429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 5644340 - 5644370
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagtt 31  Q
    |||||||||||||||||||||||||||||||    
T  5644340 tgagtatgagagagaaagttgtcaaaaagtt 5644370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9048325 - 9048367
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||| ||||||||||||||||  |||||||    
T  9048325 tgagtatgagagagaaaattgtcaaaaagttgttagaaaatgg 9048367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16808643 - 16808601
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||| ||||||||||||||||||||||  |||||||    
T  16808643 tgagtatgagatagaaagttgtcaaaaagttgttagaaaatgg 16808601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 35818999 - 35818957
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||||||||| |||||  |||||||    
T  35818999 tgagtatgagagagaaagttgtcaaaaaattgttagaaaatgg 35818957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35937521 - 35937563
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||| |||||||||||||||||| |||||||||| ||||||||    
T  35937521 tgagcatgagagagaaagttgtccaaaagttgttacaaaatgg 35937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38504232 - 38504190
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||| |||||||||||||||||||| |||| |||||||||    
T  38504232 tgagtattagagagaaagttgtcaaaaaattgtagcaaaatgg 38504190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 40102083 - 40102053
Alignment:
Q  3 agtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||    
T  40102083 agtatgagagagaaagttgtcaaaaagttgt 40102053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 42012599 - 42012629
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagtt 31  Q
    |||||||||||||||||||||||||||||||    
T  42012599 tgagtatgagagagaaagttgtcaaaaagtt 42012629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 42131054 - 42131016
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  42131054 tatgagagagaaagttgtccaaaagttgttgcagaatgg 42131016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 9431294 - 9431327
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    |||||||||||||||||||||||||||| |||||    
T  9431294 tgagtatgagagagaaagttgtcaaaaaattgtt 9431327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41159897 - 41159938
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaat 41  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  41159897 tgagtatgagagagaaagttgtcacaaaagttgtcgcaaaat 41159938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 426163 - 426131
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||||||| |||||    
T  426163 tgagtatgagagagaaagttgtcaaaaggttgt 426131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3756963 - 3756931
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||| |||||||||||||||||||||||    
T  3756963 tgagtatgaaagagaaagttgtcaaaaagttgt 3756931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3946303 - 3946259
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaatgga 44  Q
    |||||||||||||||||||||||| |||||||||  |||||||||    
T  3946303 tgagtatgagagagaaagttgtcacaaaagttgtcacaaaatgga 3946259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 11223871 - 11223911
Alignment:
Q  4 gtatgagagagaaagttgtcaaaaagttgttgcaaaatgga 44  Q
    |||||||||||||||||||||| |||||||  |||||||||    
T  11223871 gtatgagagagaaagttgtcaagaagttgtcacaaaatgga 11223911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12045662 - 12045694
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  12045662 tgagtatgagagagaaagttgtctaaaagttgt 12045694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 13884169 - 13884201
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  13884169 tgagtatgagagagaaagttgtcacaaagttgt 13884201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 21418601 - 21418633
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||||||| |||||    
T  21418601 tgagtatgagagagaaagttgtcaaaaggttgt 21418633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 21648940 - 21648972
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  21648940 tgagtatgagagagaaagttgttaaaaagttgt 21648972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 22767194 - 22767162
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  22767194 tgagtatgagagagaaaattgtcaaaaagttgt 22767162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 24946064 - 24946032
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||||| |||||||    
T  24946064 tgagtatgagagagaaagttgtcaagaagttgt 24946032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27630959 - 27630927
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  27630959 tgagtatgagagagaaagttgtcaaaaaattgt 27630927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 32175016 - 32174984
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  32175016 tgagtatgagagagaaagttgtcaaaaaattgt 32174984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 33
Target Start/End: Original strand, 35633982 - 35634010
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||    
T  35633982 tatgagagagaaagttgtcaaaaagttgt 35634010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 33
Target Start/End: Original strand, 35967419 - 35967447
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||    
T  35967419 tatgagagagaaagttgtcaaaaagttgt 35967447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 42443166 - 42443134
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  42443166 tgagtatgagagagaaagttgtctaaaagttgt 42443134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 30
Target Start/End: Complemental strand, 42658695 - 42658667
Alignment:
Q  2 gagtatgagagagaaagttgtcaaaaagt 30  Q
    |||||||||||||||||||||||||||||    
T  42658695 gagtatgagagagaaagttgtcaaaaagt 42658667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25924873 - 25924915
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  25924873 tgagtatgagagagaaagttgtcaaaaagttgtagcaaaatgg 25924915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28965849 - 28965891
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  28965849 tgagtatgagagagaaagttgtcaaaaagttgtaacaaaatgg 28965891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 14094973 - 14094940
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  14094973 tgagtatgagagagaaagttgtcaaaaagttgtt 14094940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 17835674 - 17835641
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  17835674 tgagtatgagagagaaagttgtcaaaaagttgtt 17835641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8395404 - 8395372
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  8395404 tgagtatgagagagaaagttgtcaaaaagttgt 8395372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19789085 - 19789117
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  19789085 tgagtatgagagagaaagttgtcaaaaagttgt 19789117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21506398 - 21506366
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  21506398 tgagtatgagagagaaagttgtcaaaaagttgt 21506366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29383619 - 29383587
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  29383619 tgagtatgagagagaaagttgtcaaaaagttgt 29383587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8778881 - 8778923
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||| |||||||||||||||||||||||||  |||||||    
T  8778881 tgagtatgtgagagaaagttgtcaaaaagttgttaaaaaatgg 8778923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 9954608 - 9954578
Alignment:
Q  3 agtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||    
T  9954608 agtatgagagagaaagttgtcaaaaagttgt 9954578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 23633332 - 23633362
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagtt 31  Q
    |||||||||||||||||||||||||||||||    
T  23633332 tgagtatgagagagaaagttgtcaaaaagtt 23633362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 237407 - 237436
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagt 30  Q
    ||||||||||||||||||||||||||||||    
T  237407 tgagtatgagagagaaagttgtcaaaaagt 237436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15722512 - 15722553
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatg 42  Q
    |||||||||||||||| ||||||||||||||||  |||||||    
T  15722512 tgagtatgagagagaaggttgtcaaaaagttgtcacaaaatg 15722553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3800626 - 3800594
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||| |||||||||||||||||||||    
T  3800626 tgagtatgagatagaaagttgtcaaaaagttgt 3800594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 12044394 - 12044362
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  12044394 tgagtatgagagagaaagttgtctaaaagttgt 12044362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18792441 - 18792473
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  18792441 tgagtatgagagagaaagttgttaaaaagttgt 18792473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30906672 - 30906704
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||| |||||||||||||||||||    
T  30906672 tgagtatgagagataaagttgtcaaaaagttgt 30906704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 32853153 - 32853185
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  32853153 tgagtatgagagagaaagttgtcacaaagttgt 32853185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1790053 - 1790013
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaat 41  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  1790053 tgagtatgagagagaaagttgtcaaaaagttgtcgcaaaat 1790013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19426642 - 19426600
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  19426642 tgagtatgagagagaaagttgtcaaaaagttgtcacaaaatgg 19426600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42060718 - 42060676
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||||||||||| | |||||||||    
T  42060718 tgagtatgagagagaaagttgtcaaaaagttatagcaaaatgg 42060676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 9055329 - 9055296
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  9055329 tgagtatgagagagaaagttgtcaaaaagttgtt 9055296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5378689 - 5378657
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  5378689 tgagtatgagagagaaagttgtcaaaaagttgt 5378657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1471299 - 1471342
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||||| |||||||||| ||||||||    
T  1471299 tgagtatgagagagaaagttgtcacaaaagttgttacaaaatgg 1471342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2790239 - 2790201
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaa 39  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  2790239 tgagtatgagagagaaagttgtcaaaaaattgttacaaa 2790201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 16645692 - 16645730
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  16645692 tatgagagagaaagttgtcaaaaaattgtagcaaaatgg 16645730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 17620053 - 17620091
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  17620053 tatgagagagaaagttgtcaaaaaattgtagcaaaatgg 17620091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 29609875 - 29609905
Alignment:
Q  3 agtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||    
T  29609875 agtatgagagagaaagttgtcaaaaagttgt 29609905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32258348 - 32258306
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||| |||||||||||||| ||||||||| |||||||||    
T  32258348 tgagtatgggagagaaagttgtccaaaagttgtagcaaaatgg 32258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 2756938 - 2756971
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  2756938 tgagtatgagagataaagttgtcaaaaagttgtt 2756971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 21037243 - 21037276
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||| ||||||||||||||||||||||||||    
T  21037243 tgagtataagagagaaagttgtcaaaaagttgtt 21037276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24700183 - 24700142
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatg 42  Q
    ||||||||| |||||||||||| ||||||||||| |||||||    
T  24700183 tgagtatgatagagaaagttgtaaaaaagttgttacaaaatg 24700142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30769670 - 30769703
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  30769670 tgagtatgagagataaagttgtcaaaaagttgtt 30769703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 32
Target Start/End: Original strand, 30832917 - 30832946
Alignment:
Q  3 agtatgagagagaaagttgtcaaaaagttg 32  Q
    ||||||||||||||||||||||||||||||    
T  30832917 agtatgagagagaaagttgtcaaaaagttg 30832946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 41254838 - 41254809
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagt 30  Q
    ||||||||||||||||||||||||||||||    
T  41254838 tgagtatgagagagaaagttgtcaaaaagt 41254809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 41815207 - 41815174
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    |||||||||||||||||||||||||||| |||||    
T  41815207 tgagtatgagagagaaagttgtcaaaaaattgtt 41815174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44184567 - 44184608
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaat 41  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  44184567 tgagtatgagagagaaagttgtcacaaaagttgtcgcaaaat 44184608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5724100 - 5724068
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  5724100 tgagtatgagagagaaagttgttaaaaagttgt 5724068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7077762 - 7077794
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||||| |||||||    
T  7077762 tgagtatgagagagaaagttgtcaagaagttgt 7077794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20406603 - 20406571
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||| |||||||||||||||||||||    
T  20406603 tgagtatgagaaagaaagttgtcaaaaagttgt 20406571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21752720 - 21752688
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||| |||||||||||||||||||    
T  21752720 tgagtatgagagataaagttgtcaaaaagttgt 21752688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 31
Target Start/End: Complemental strand, 23761119 - 23761091
Alignment:
Q  3 agtatgagagagaaagttgtcaaaaagtt 31  Q
    |||||||||||||||||||||||||||||    
T  23761119 agtatgagagagaaagttgtcaaaaagtt 23761091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24267656 - 24267688
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  24267656 tgagtatgagagagaaagttgtctaaaagttgt 24267688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 33
Target Start/End: Complemental strand, 28824561 - 28824533
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||    
T  28824561 tatgagagagaaagttgtcaaaaagttgt 28824533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 33684742 - 33684710
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  33684742 tgagtatgagagagaaagttgtaaaaaagttgt 33684710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34349036 - 34349068
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  34349036 tgagtatgagagagaaaattgtcaaaaagttgt 34349068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41890589 - 41890549
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaat 41  Q
    |||||| |||||||||| |||||||||| ||||||||||||    
T  41890589 tgagtacgagagagaaaattgtcaaaaaattgttgcaaaat 41890549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 45607086 - 45607054
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||||| |||||||    
T  45607086 tgagtatgagagagaaagttgtcaagaagttgt 45607054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 46022491 - 46022523
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||| ||||||||||||||||    
T  46022491 tgagtatgagagagaatgttgtcaaaaagttgt 46022523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 48866939 - 48866971
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||| ||||||||||||||||||||||||    
T  48866939 tgagtatgtgagagaaagttgtcaaaaagttgt 48866971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6851668 - 6851708
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaat 41  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  6851668 tgagtatgagagagaaagttgtcaaaaagttgtagcaaaat 6851708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31635819 - 31635861
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  31635819 tgagtatgagagagaaagttgtcaaaaagttgttagaaaatgg 31635861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 14797659 - 14797692
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  14797659 tgagtatgagagagaaagttgtcaaaaagttgtt 14797692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 41868378 - 41868411
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  41868378 tgagtatgagagagaaagttgtcaaaaagttgtt 41868411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7086133 - 7086165
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  7086133 tgagtatgagagagaaagttgtcaaaaagttgt 7086165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7498000 - 7498032
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  7498000 tgagtatgagagagaaagttgtcaaaaagttgt 7498032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27540077 - 27540037
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaat 41  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  27540077 tgagtatgagagaaaaagttgtcaaaaagttgtagcaaaat 27540037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 30413737 - 30413777
Alignment:
Q  3 agtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||| ||||||||||||||||||| |||||||||    
T  30413737 agtatgagagataaagttgtcaaaaagttgtagcaaaatgg 30413777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 42665821 - 42665853
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  42665821 tgagtatgagagagaaagttgtcaaaaagttgt 42665853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 5606632 - 5606593
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgttgcaaaatgga 44  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  5606632 tatgagagagaaaattatcaaaaagttgttgcaaaatgga 5606593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4723628 - 4723586
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||| |||||||||||  |||||||    
T  4723628 tgagtatgagagagaaagttgtaaaaaagttgttaaaaaatgg 4723586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6639481 - 6639523
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||| |||||||||||  |||||||    
T  6639481 tgagtatgagagagaaagttgttaaaaagttgttagaaaatgg 6639523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 23045152 - 23045122
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagtt 31  Q
    |||||||||||||||||||||||||||||||    
T  23045152 tgagtatgagagagaaagttgtcaaaaagtt 23045122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 13104539 - 13104510
Alignment:
Q  3 agtatgagagagaaagttgtcaaaaagttg 32  Q
    ||||||||||||||||||||||||||||||    
T  13104539 agtatgagagagaaagttgtcaaaaagttg 13104510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 23358588 - 23358621
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  23358588 tgagtatgagagagaaagttgtctaaaagttgtt 23358621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28245791 - 28245750
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaat 41  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  28245791 tgagtatgagagagaaagttgtcacaaaagttgtcgcaaaat 28245750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 30996790 - 30996761
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagt 30  Q
    ||||||||||||||||||||||||||||||    
T  30996790 tgagtatgagagagaaagttgtcaaaaagt 30996761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 33857279 - 33857246
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    |||||||||||||||||||||||||||| |||||    
T  33857279 tgagtatgagagagaaagttgtcaaaaaattgtt 33857246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 34134781 - 34134822
Alignment:
Q  3 agtatgagagagaaagttgtca-aaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||| |||||||||| ||||||||    
T  34134781 agtatgagagagaaagttgtcagaaaagttgttacaaaatgg 34134822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 40496412 - 40496383
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagt 30  Q
    ||||||||||||||||||||||||||||||    
T  40496412 tgagtatgagagagaaagttgtcaaaaagt 40496383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 42081099 - 42081070
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagt 30  Q
    ||||||||||||||||||||||||||||||    
T  42081099 tgagtatgagagagaaagttgtcaaaaagt 42081070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 43356351 - 43356318
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  43356351 tgagtatgagagataaagttgtcaaaaagttgtt 43356318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 546394 - 546426
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  546394 tgagtatgagagagaaagttgttaaaaagttgt 546426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 1889209 - 1889177
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  1889209 tgagtatgagagagaaagttgtcaaaaaattgt 1889177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4842529 - 4842561
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  4842529 tgagtatgagagagaaagttgtctaaaagttgt 4842561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9194492 - 9194448
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaatgga 44  Q
    |||||||||||||||||||||||| |||||||||  |||||||||    
T  9194492 tgagtatgagagagaaagttgtcataaaagttgtcacaaaatgga 9194448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11229330 - 11229362
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||||| |||||||    
T  11229330 tgagtatgagagagaaagttgtcaagaagttgt 11229362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11442734 - 11442702
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  11442734 tgagtatgagagagaaagttgtcaaaaaattgt 11442702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12175337 - 12175377
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaat 41  Q
    ||||||||||||| ||||||||||||||||| | |||||||    
T  12175337 tgagtatgagagataaagttgtcaaaaagttatagcaaaat 12175377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18619406 - 18619438
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||| ||||||||||||||||||||||||||    
T  18619406 tgagtacgagagagaaagttgtcaaaaagttgt 18619438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23880157 - 23880125
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||| ||||||||||||    
T  23880157 tgagtatgagagagaaagttatcaaaaagttgt 23880125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 24361553 - 24361521
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||| |||||||||||||||||||||    
T  24361553 tgagtatgagatagaaagttgtcaaaaagttgt 24361521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30856869 - 30856837
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  30856869 tgagtatgagagagaaagttgtctaaaagttgt 30856837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30977952 - 30977908
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaatgga 44  Q
    |||||||||||||||||||||||| |||||||||  |||||||||    
T  30977952 tgagtatgagagagaaagttgtcataaaagttgtcacaaaatgga 30977908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 32688553 - 32688585
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  32688553 tgagtatgagagagaaagttgtcaaaaaattgt 32688585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34249642 - 34249610
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||| |||||||||||||||||||||||||    
T  34249642 tgagtataagagagaaagttgtcaaaaagttgt 34249610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36587477 - 36587509
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  36587477 tgagtatgagagagaaagttgtcaaaaaattgt 36587509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 42141603 - 42141635
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  42141603 tgagtatgagagagaaagttgtccaaaagttgt 42141635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 42554838 - 42554806
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  42554838 tgagtatgagagagaaagttgtaaaaaagttgt 42554806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 33
Target Start/End: Original strand, 43650562 - 43650590
Alignment:
Q  5 tatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||    
T  43650562 tatgagagagaaagttgtcaaaaagttgt 43650590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17037 - 16995
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  17037 tgagtatgagagagaaagttgtcaaaaagttgtagtaaaatgg 16995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31708432 - 31708390
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  31708432 tgagtatgagagagaaagttgtcaaaaagttgttataaaatgg 31708390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6046375 - 6046342
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  6046375 tgagtatgagagagaaagttgtcaaaaagttgtt 6046342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21023360 - 21023328
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  21023360 tgagtatgagagagaaagttgtcaaaaagttgt 21023328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34381074 - 34381042
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  34381074 tgagtatgagagagaaagttgtcaaaaagttgt 34381042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39595334 - 39595302
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  39595334 tgagtatgagagagaaagttgtcaaaaagttgt 39595302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40223794 - 40223826
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  40223794 tgagtatgagagagaaagttgtcaaaaagttgt 40223826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41192649 - 41192609
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaat 41  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  41192649 tgagtatgagagagaaagttgtcaaaaaattgtagcaaaat 41192609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18695381 - 18695338
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||||| |||||||||| ||||||||    
T  18695381 tgagtatgagagagaaagttgtcacaaaagttgttacaaaatgg 18695338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 26660420 - 26660463
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgga 44  Q
    ||||||||||||||||||||||||| |||||||  |||||||||    
T  26660420 tgagtatgagagagaaagttgtcaagaagttgtcacaaaatgga 26660463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 26932012 - 26932055
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgga 44  Q
    ||||||||||||||||||||||||| |||||||  |||||||||    
T  26932012 tgagtatgagagagaaagttgtcaagaagttgtcacaaaatgga 26932055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 2117633 - 2117667
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttg 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  2117633 tgagtatgagagagaaagttgtcacaaagttgttg 2117667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4985631 - 4985593
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaa 39  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  4985631 tgagtatgagagagaaaattgttaaaaagttgttgcaaa 4985593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12401254 - 12401216
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaa 39  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  12401254 tgagtatgagagagaaagttgtaaaaaagttgttacaaa 12401216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19271921 - 19271879
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||    
T  19271921 tgagtatgagagagaaagttgtctaaacgttgttacaaaatgg 19271879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22920501 - 22920543
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||    
T  22920501 tgagtatgagagagaaagttgtccaaaatttgttacaaaatgg 22920543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 31006119 - 31006081
Alignment:
Q  3 agtatgagagagaaagttgtcaaaaagttgttgcaaaat 41  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  31006119 agtatgagagagaaagttgtcaaaaagttttagcaaaat 31006081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36548389 - 36548431
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    |||||||||||||||||||||||| ||||||||  ||||||||    
T  36548389 tgagtatgagagagaaagttgtcagaaagttgtcacaaaatgg 36548431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36786267 - 36786309
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgg 43  Q
    ||||||||||||||||||||||| |||| || |||||||||||    
T  36786267 tgagtatgagagagaaagttgtccaaaaattattgcaaaatgg 36786309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6446526 - 6446567
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaat 41  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  6446526 tgagtatgagagagaaagttgtcacaaaagttgtcgcaaaat 6446567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11880996 - 11881029
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  11880996 tgagtatgagagagaaagttgtctaaaagttgtt 11881029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16553566 - 16553525
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatg 42  Q
    |||||||||||||||||||||| ||||| |||| ||||||||    
T  16553566 tgagtatgagagagaaagttgtaaaaaatttgtagcaaaatg 16553525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 22647570 - 22647603
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||| ||||||||||||||||||||||||||    
T  22647570 tgagtataagagagaaagttgtcaaaaagttgtt 22647603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31329135 - 31329168
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  31329135 tgagtatgatagagaaagttgtcaaaaagttgtt 31329168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 32873158 - 32873191
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgtt 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  32873158 tgagtatgatagagaaagttgtcaaaaagttgtt 32873191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 91277 - 91245
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  91277 tgagtatgagagagaaagttgtccaaaagttgt 91245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 471876 - 471844
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||| |||||||||||||||||||||    
T  471876 tgagtatgagaaagaaagttgtcaaaaagttgt 471844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 1774292 - 1774324
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||||| |||||||    
T  1774292 tgagtatgagagagaaagttgtcaagaagttgt 1774324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8920141 - 8920097
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaatgga 44  Q
    |||||||||||||||||||||||| |||||||||  |||||||||    
T  8920141 tgagtatgagagagaaagttgtcacaaaagttgtcacaaaatgga 8920097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12661956 - 12661988
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  12661956 tgagtatgagagagaaagttgtcaaaaaattgt 12661988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12779615 - 12779647
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||| |||||||||||||||||||    
T  12779615 tgagtatgagagataaagttgtcaaaaagttgt 12779647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 18449323 - 18449291
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  18449323 tgagtatgagagagaaagttgttaaaaagttgt 18449291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19376141 - 19376173
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||| ||||||||||||    
T  19376141 tgagtatgagagagaaagttatcaaaaagttgt 19376173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 20591483 - 20591515
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  20591483 tgagtatgagagagaaagttgtcaaaaaattgt 20591515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24431627 - 24431659
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  24431627 tgagtatgagagagaaaattgtcaaaaagttgt 24431659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28904053 - 28904021
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  28904053 tgagtatgagagagaaagttgtctaaaagttgt 28904021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28940448 - 28940416
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  28940448 tgagtatgagagagaaagttgtctaaaagttgt 28940416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36713187 - 36713219
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||||| |||||||    
T  36713187 tgagtatgagagagaaagttgtcaagaagttgt 36713219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 39788715 - 39788747
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  39788715 tgagtatgagagagaaagttgtccaaaagttgt 39788747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 39840718 - 39840750
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  39840718 tgagtatgagagagaaatttgtcaaaaagttgt 39840750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 42909781 - 42909749
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||| |||||||||||||||||||||    
T  42909781 tgagtatgagaaagaaagttgtcaaaaagttgt 42909749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6879 - 6847
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  6879 tgagtatgagagagaaagttgtcaaaaagttgt 6847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27401 - 27358
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgttgcaaaatgga 44  Q
    |||||||||||||||||||||||||||| ||||  |||||||||    
T  27401 tgagtatgagagagaaagttgtcaaaaaattgtcacaaaatgga 27358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11027 - 10983
Alignment:
Q  1 tgagtatgagagagaaagttgtca-aaaagttgttgcaaaatgga 44  Q
    |||||||||||||||||||||||| |||||||||  |||||||||    
T  11027 tgagtatgagagagaaagttgtcacaaaagttgtcccaaaatgga 10983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11700 - 11668
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  11700 tgagtatgagagagaaagttgttaaaaagttgt 11668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34470 - 34438
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  34470 tgagtatgagagagaaagttgtcacaaagttgt 34438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 155968 - 155936
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||| ||||||||||||||||||||||||||    
T  155968 tgagtacgagagagaaagttgtcaaaaagttgt 155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 199328 - 199296
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  199328 tgagtatgagagagaaagttgtcaaaaaattgt 199296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6489 - 6457
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    |||||||||||||||| ||||||||||||||||    
T  6489 tgagtatgagagagaatgttgtcaaaaagttgt 6457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 440780 - 440748
Alignment:
Q  1 tgagtatgagagagaaagttgtcaaaaagttgt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  440780 tgagtatgagagagaaagttgtctaaaagttgt 440748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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