View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9781_high_8 (Length: 272)
Name: NF9781_high_8
Description: NF9781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9781_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 7 - 259
Target Start/End: Original strand, 85245 - 85497
Alignment:
| Q |
7 |
gttgcgtcttagactgcagtcgcagaccttttttgaaaacataatccgatagctctttatcaatttagggttgtggaaagattggactaattgaaatttg |
106 |
Q |
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| T |
85245 |
gttgcgtcttagactgcagtcgcagaccttttttgaaaacataatccgatagctctttatcaatttagggttgtggaaagattggactaattgaaatttg |
85344 |
T |
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| Q |
107 |
tcttctttgttcacagctggattatgcagcaaaagttaagagcccctcagatgcagagaagtactatgctatagctgtatctactctgaatgatgttctt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
85345 |
tcttctttgttcacagctggattatgcagcaaaagttaagagcccctcagatgcagagaagtactatgctatagctgtatctactctgaatgatgttctt |
85444 |
T |
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| Q |
207 |
agcaaaattggttaatatgaatgatttcttgctttcttgtgtaagctttgtct |
259 |
Q |
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| T |
85445 |
agcaaaattggttaatatgaatgatttcttgctttcttgtgtaagctttgtct |
85497 |
T |
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