View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9781_low_14 (Length: 240)
Name: NF9781_low_14
Description: NF9781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9781_low_14 |
 |  |
|
| [»] scaffold0294 (1 HSPs) |
 |  |  |
|
| [»] scaffold1476 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 224; Significance: 1e-123; HSPs: 28)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 5180727 - 5180950
Alignment:
| Q |
1 |
cattcagtttcatcacctctacaagcaatgagattcaaatcttgtgcatcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5180727 |
cattcagtttcatcacctctacaagcaatgagattcaaatcttgtgcatcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaa |
5180826 |
T |
 |
| Q |
101 |
caaaaacgacctccactttgttaccgggttctatgcttgatactaccctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5180827 |
caaaaacgacctccactttgttaccgggttctatgcttgatactaccctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctg |
5180926 |
T |
 |
| Q |
201 |
aatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
5180927 |
aatggtagcctttgtgtaattttt |
5180950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 5448951 - 5448728
Alignment:
| Q |
1 |
cattcagtttcatcacctctacaagcaatgagattcaaatcttgtgcatcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaa |
100 |
Q |
| |
|
|||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| | | ||||||||| |||| ||||| ||||| |||| |
|
|
| T |
5448951 |
cattcattttcatcacctctacaagcaatgacgttaaaatcttgtgcatcatataccagatatactactgtcttctccacagtgaaatcattctcgaaaa |
5448852 |
T |
 |
| Q |
101 |
caaaaacgacctccactttgttaccgggttctatgcttgatactaccctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctg |
200 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||| |||||||||| |||||| ||||| | ||||||||| || ||||| || ||||||||||||| || |
|
|
| T |
5448851 |
caaaaacgatctccactttgtttccgggttctatacttgatactaacctctgcccctccttatcttcaaaggaaactaatgtctcactcttatagatttg |
5448752 |
T |
 |
| Q |
201 |
aatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
5448751 |
aatggtagcctttgtgtaattttt |
5448728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 47 - 224
Target Start/End: Original strand, 5100817 - 5100994
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
|||| ||||| ||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
5100817 |
catcgtatacgagataaactgctgtctttttcacaatgaaactgttctcaaaaacaacaacgacctccactttgttaccgggttctatacttgatactac |
5100916 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
|||| || |||| ||||||||||| |||||||| | || |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5100917 |
cctcagagcctcctcatcttcaaaggagactaatgcctcgctcttatagagctgaatggtggcctttgtgtaattttt |
5100994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 5283177 - 5283397
Alignment:
| Q |
1 |
cattcagtttcatcacctctacaagcaatgagattcaaatcttgtgcatcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaa |
100 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
5283177 |
cattcactttcatcacttctacaagcaatgagattcaaatcttgtgcatcatataccagataaattgctgtcttcttcacaatgaaactgttttcaaaaa |
5283276 |
T |
 |
| Q |
101 |
caaaaacgacctccactttgttaccgggttctatgcttgatactaccctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctg |
200 |
Q |
| |
|
|||| | |||||||||||||||||| ||||| || ||||||| ||||||||| | | |||| |||||| || || | |||||| |||||||| || |
|
|
| T |
5283277 |
caaatatgacctccactttgttacctggttcgatacttgatattaccctctgccac---tcattttcaaagtaggaaaatgcatcactattatagagttg |
5283373 |
T |
 |
| Q |
201 |
aatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
||||| ||||||||||||||||| |
|
|
| T |
5283374 |
gatggtggcctttgtgtaattttt |
5283397 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 47 - 224
Target Start/End: Original strand, 5135918 - 5136095
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
|||| ||||| ||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
5135918 |
catcgtatacgagataaactgctgtctttttcacaatgaaactgttctcaaaaacaacaacgacctccactttgttaccgggttctatacttgatactac |
5136017 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
|||| || |||| ||||||||||| ||| |||| | || ||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
5136018 |
cctcagagcctcctcatcttcaaaggaggctaatgcttcgctcttgtagagctgaatggtggcctttgtgtaattttt |
5136095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 42 - 217
Target Start/End: Complemental strand, 5098512 - 5098337
Alignment:
| Q |
42 |
ttgtgcatcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgat |
141 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||| |||||||||||||| ||||| ||||||| || |||||||||||||||||| |||||||| |||||| |
|
|
| T |
5098512 |
ttgttcatcatataccagataaactgctgtctttttcacaatgaaactgttctcgaaaacaacaatgacctccactttgttaccaggttctatacttgat |
5098413 |
T |
 |
| Q |
142 |
actaccctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgt |
217 |
Q |
| |
|
| ||||||||| | ||| ||||||||||| ||||| || | ||||||||||||||||||||||| |||||||||| |
|
|
| T |
5098412 |
attaccctctggctctcctcatcttcaaaggagaccaatgcctcactcttatagagctgaatggtggcctttgtgt |
5098337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 48 - 222
Target Start/End: Complemental strand, 5398341 - 5398167
Alignment:
| Q |
48 |
atcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactacc |
147 |
Q |
| |
|
||||||||| ||||||| || ||||||||||||||||||| ||||| |||||||| || ||||| ||||||||||| |||||||| |||||||||||| |
|
|
| T |
5398341 |
atcatatacaagataaactgttgtcttcttcacaatgaaatcattctcgaaaacaaagacaacctcaactttgttaccaggttctatacttgatactacc |
5398242 |
T |
 |
| Q |
148 |
ctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattt |
222 |
Q |
| |
|
|| || |||||||||| |||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5398241 |
ctttgcccctcttcatgttcaaaggagaataacgcctcactcttatagagctgaatggtggcctttgtgtaattt |
5398167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 47 - 224
Target Start/End: Complemental strand, 5372393 - 5372216
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
|||| ||||| |||||||||| ||||||||||||||||||| ||||| | ||||||| || ||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
5372393 |
catcgtatacgagataaattgttgtcttcttcacaatgaaatcattctcgagaacaaaatggatctccactttgttaccaggttctagacttgatactac |
5372294 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||| | ||||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
5372293 |
cctctgcccctcttcatcttcaaaggagactaatgcttcactcttataaagctgaatggtggcctttgtgtaattttt |
5372216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 5439351 - 5439132
Alignment:
| Q |
3 |
ttcagtttcatcacctctacaagcaatgagattcaaatcttgtgcatcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaaca |
102 |
Q |
| |
|
|||| ||||||||| ||||| ||||| | |||||||| ||||||||||||||| |||||| ||||||||| || |||||||| |||| |||||| |
|
|
| T |
5439351 |
ttcattttcatcacatctactagcaacggcattcaaattttgtgcatcatatacgagataagctgctgtctttttggcaatgaaatcattcttgaaaaca |
5439252 |
T |
 |
| Q |
103 |
aaaacgacctccactttgttaccgggttctatgcttgatactaccctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaa |
202 |
Q |
| |
|
||||| ||||||||||||||||| |||||||| |||||| || |||||| ||||| ||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
5439251 |
aaaacaacctccactttgttaccaggttctatacttgattttaacctctgcccctcctcatcttcaaaagagactacagcctcactcttatagagctgaa |
5439152 |
T |
 |
| Q |
203 |
tggtagcctttgtgtaattt |
222 |
Q |
| |
|
|||| |||||||||| |||| |
|
|
| T |
5439151 |
tggtggcctttgtgtgattt |
5439132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 47 - 221
Target Start/End: Complemental strand, 5178035 - 5177861
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
|||||||||| ||||||| || ||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
5178035 |
catcatatacgagataaactgttgttttcttcacaatgaaaccgttctcaaaaacaacaacaacctccactttgttacaaggttctatacttgatactac |
5177936 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaatt |
221 |
Q |
| |
|
||||||||||||||||||||||| ||| |||| | || |||||||| ||||||||||| || ||||||||||| |
|
|
| T |
5177935 |
tctctgaccctcttcatcttcaaaggaggctaatgcctctctcttataaagctgaatggtggcttttgtgtaatt |
5177861 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 47 - 221
Target Start/End: Complemental strand, 5279860 - 5279686
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
|||||||||| ||||||| || ||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
5279860 |
catcatatacgagataaactgttgttttcttcacaatgaaaccgttctcaaaaacaacaacaacctccactttgttacaaggttctatacttgatactac |
5279761 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaatt |
221 |
Q |
| |
|
||||||||||||||||||||||| ||| |||| | || |||||||| ||||||||||| || ||||||||||| |
|
|
| T |
5279760 |
tctctgaccctcttcatcttcaaaggaggctaatgcctctctcttataaagctgaatggtggcttttgtgtaatt |
5279686 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 47 - 221
Target Start/End: Original strand, 5688902 - 5689076
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
|||||||||| ||||||| || ||| |||||||||||||||| |||||||||||| |||| |||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
5688902 |
catcatatacgagataaactgttgttttcttcacaatgaaaccgttctcaaaaacagaaacaacctccactttgttacaaggttctatacttgatactac |
5689001 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaatt |
221 |
Q |
| |
|
||||| ||||||||||||||||| |||||||| | || |||||||| ||||||||||| || ||||||||||| |
|
|
| T |
5689002 |
tctctgtccctcttcatcttcaaaggagactaatgcctcgctcttataaagctgaatggtggcttttgtgtaatt |
5689076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 224
Target Start/End: Original strand, 5156012 - 5156189
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
|||| ||||| ||||||| || ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
5156012 |
catcgtatacaagataaactgttgtcttcttcacaatgaaattaatctcgaaaacaaaatggacctccactttgttaccaggttctagacttgatactac |
5156111 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
|||||| ||||||||||||||||| ||| | || | ||||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
5156112 |
cctctgcccctcttcatcttcaaaggaggccaatgcctcactcttataaagctgaatggtggcctttgtgtaattttt |
5156189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 224
Target Start/End: Original strand, 5242511 - 5242688
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
|||||||||| ||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| |
|
|
| T |
5242511 |
catcatatacgagataaactactgtcttcttcacaatgaaactgttctcaaaaacaaaaacgacctccactttgttaccaggttctatacttcatactac |
5242610 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
||| | |||| ||||||||||| | | ||| | || ||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
5242611 |
tctcagccccttctcatcttcaaaggcggctactgcctctctcttgtagagctgaatggtggcctttgtgtaattttt |
5242688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 224
Target Start/End: Complemental strand, 5351696 - 5351519
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
|||||||||| ||||||| | ||||||| ||||||||| || ||||| |||||||||| ||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
5351696 |
catcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaatgacctccactttgttactgggttctatacttgatactaa |
5351597 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
|||||| ||||| ||||||||||| || ||||| | ||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
5351596 |
cctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaattttt |
5351519 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 5256067 - 5256218
Alignment:
| Q |
1 |
cattcagtttcatcacctctacaagcaatgagattcaaatcttgtgcatcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaa |
100 |
Q |
| |
|
|||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
5256067 |
cattcactttcatcacggctacaagcaatgtgattcaaattttgtgcatcatataccaaataaattgctgtcttcttcacaatgaaatcattcttgaaaa |
5256166 |
T |
 |
| Q |
101 |
caaaaacgacctccactttgttaccgggttctatgcttgatactaccctctg |
152 |
Q |
| |
|
|||| |||||||||||||||||||| ||||| || ||||||| ||||||||| |
|
|
| T |
5256167 |
caaatacgacctccactttgttacctggttcaatacttgatattaccctctg |
5256218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 224
Target Start/End: Complemental strand, 5427196 - 5427019
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
|||||||||| ||||||| | |||||||| |||||| |||||| ||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||| |
|
|
| T |
5427196 |
catcatatacgagataaactactgtcttcgtcacaacgaaactgttctcaaaaacaaaaacgacctccattttgttaccaggttctatacttgatactac |
5427097 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
|| | ||||| ||||||||||| || ||||| ||||||||||| ||||||||| | ||||||||||||||||| |
|
|
| T |
5427096 |
tctttccccctcctcatcttcaaatgacactaatacctcactcttataaagctgaatgatggcctttgtgtaattttt |
5427019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 47 - 224
Target Start/End: Complemental strand, 5346325 - 5346148
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||||||||||| |||||||| |||||||| || |
|
|
| T |
5346325 |
catcatatatgagataaattgctgtcttcttcacaatgaaaccattctcaataacaacgacaacctccactttgttaccaggttctatacttgatacaac |
5346226 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
||||| ||||| ||||||||||| | | ||| | || ||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
5346225 |
tctctggccctcctcatcttcaaaggcggctactgcctctctcttgtatagctgaatggtagcctttgtgtaattttt |
5346148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 5352863 - 5353039
Alignment:
| Q |
48 |
atcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactacc |
147 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||| ||||| ||||||| ||| ||||| ||||||| ||| || || || ||||||||||| |
|
|
| T |
5352863 |
atcatataccagataaattgttgtcttcttcacgatgaaacaattctcgaaaacaataaccacctctactttgtcaccaggatccatacttgatactact |
5352962 |
T |
 |
| Q |
148 |
ctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
||||| ||||| ||||||||||| || | ||| | || |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
5352963 |
ctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttt |
5353039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 224
Target Start/End: Original strand, 5065448 - 5065625
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
||||||||| ||||||| || |||| ||||||||| ||||| ||||||||||||| ||| | |||||||| || || ||||| || ||||||||||| |
|
|
| T |
5065448 |
catcatatatgagataaactgttgtcctcttcacaacgaaaccgttctcaaaaacaacaacaaaatccactttatttccaggttcaatacttgatactac |
5065547 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
||||| ||||| ||||||||||| |||| ||||| || |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5065548 |
tctctgcccctcctcatcttcaaaggagattaacgcctctctcttatagagctgaatggtggattttgtgtaattttt |
5065625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 224
Target Start/End: Original strand, 5126628 - 5126805
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||||||| |||| |||||||| ||| | ||| ||||||||||| | |||||| ||||||||||| |
|
|
| T |
5126628 |
catcatatatgagataaacagctgtcttcttcacaatgaaaccgttcttaaaaacaacaacaatctcaactttgttaccagcttctatacttgatactac |
5126727 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
|||| ||||| ||||||||||| |||||| | || ||||||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
5126728 |
tctctccccctcctcatcttcaaaggagactgctgcctctctcttatagagttgaatggtggccttcgtgtaattttt |
5126805 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 224
Target Start/End: Original strand, 23127309 - 23127486
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
|||||||||| ||||||| || ||| |||||||||| ||||| ||||||||||| | ||| ||||||| ||||||||| |||||| |||||||||| |
|
|
| T |
23127309 |
catcatatacaagataaactgttgtattcttcacaacgaaaccattctcaaaaacgacaacaacctccattttgttaccaggttctgcacttgatactaa |
23127408 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
|||| || || |||||||| || |||||||| || || |||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
23127409 |
gctcttcccttcctcatcttcgaacgagactaatgtctctctcttatagatctgaatggtaccctttgtgtaattttt |
23127486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 224
Target Start/End: Complemental strand, 2939211 - 2939030
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
|||||||||| |||||||||| || ||||||||||||| || ||||| | ||||||| |||||||||||||||||| |||| || ||||||||||| |
|
|
| T |
2939211 |
catcatatacgagataaattgttgccttcttcacaatgcaatcattctcgataacaaaatggacctccactttgttaccaggttatagacttgatactac |
2939112 |
T |
 |
| Q |
147 |
cctctgaccctctt----catcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
|||||| || |||| ||||||| || |||||||| | ||||||||||||||||||||||| |||||| | |||||||| |
|
|
| T |
2939111 |
cctctgcccttcttcatccatcttcgaaggagactaatgcctcactcttatagagctgaatggtggcctttatataattttt |
2939030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 5334457 - 5334362
Alignment:
| Q |
71 |
tcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactaccctctgaccctcttcatctt |
166 |
Q |
| |
|
||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||||| |
|
|
| T |
5334457 |
tcttcttcaaaatgaaatcattctcgaaaacaaaaacgacctccactttgttaccaggttctagacatgatactaccctctacccctcttcatctt |
5334362 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 224
Target Start/End: Original strand, 5124442 - 5124619
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
||||||||| | ||| |||| ||||| |||||||||||| | |||| |||||||||||| | |||||||| ||||| |||||||| || ||||||| |
|
|
| T |
5124442 |
catcatatataatatacattgttgtctccttcacaatgaagcggttcttaaaaacaaaaacaaattccactttattaccaggttctatactcgatactaa |
5124541 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
|| || ||||| || |||| ||| | |||||| | ||| ||||||||||| |||||||| |||| ||||||||||| |
|
|
| T |
5124542 |
tctatgcccctcctcctcttgaaatgcgactaatgcatctctcttatagagttgaatggtccccttcgtgtaattttt |
5124619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 224
Target Start/End: Original strand, 5072692 - 5072858
Alignment:
| Q |
58 |
agataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactaccctctgaccct |
157 |
Q |
| |
|
||||||||| |||||| |||||||||||| ||||||| ||||| || |||||||||| |||||| || ||||| |||||||||| |||| |||| |
|
|
| T |
5072692 |
agataaattattgtctttttcacaatgaaatcgttctcaacaacaacgacaacctccacttggttaccaggctctatacttgatactaatctctcgccct |
5072791 |
T |
 |
| Q |
158 |
cttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
| ||||||| || |||||||| | || |||||||| || |||||||| || || ||||||||||| |
|
|
| T |
5072792 |
catcatctttgaaggagactaatgcctctctcttatatagttgaatggtggctttagtgtaattttt |
5072858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 175
Target Start/End: Complemental strand, 5253827 - 5253701
Alignment:
| Q |
49 |
tcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactaccc |
148 |
Q |
| |
|
||||||| ||||||| || ||| |||||||||||||||| ||||||||||||| ||| | ||||||||| || || ||||| || ||| ||| ||| | |
|
|
| T |
5253827 |
tcatatatgagataaactgtcgtcctcttcacaatgaaactgttctcaaaaacaacaacaaactccactttatttccaggttcaatacttaataatactc |
5253728 |
T |
 |
| Q |
149 |
tctgaccctcttcatcttcaaaagaga |
175 |
Q |
| |
|
| || ||||| || |||||||| |||| |
|
|
| T |
5253727 |
tttgcccctcctcgtcttcaaaggaga |
5253701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 5334337 - 5334299
Alignment:
| Q |
184 |
tcactcttatagagctgaatggtagcctttgtgtaattt |
222 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
5334337 |
tcactcttatagagttgaatggtggcctttgtgtaattt |
5334299 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 224
Target Start/End: Original strand, 36212931 - 36213097
Alignment:
| Q |
58 |
agataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactaccctctgaccct |
157 |
Q |
| |
|
|||||||| ||||||||||||||||||||| | ||||||||||||| ||| ||||||| ||| | ||| |||||||| |||||||||| ||||| |||| |
|
|
| T |
36212931 |
agataaatcgctgtcttcttcacaatgaaattgttctcaaaaacaacaacaacctccattttatcaccaggttctatacttgatactaatctctgcccct |
36213030 |
T |
 |
| Q |
158 |
cttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
| ||||||||||| |||||||| | || |||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
36213031 |
cctcatcttcaaatgagactaatgcctctctcttatagatctgaatggtagcctttgtgtgattttt |
36213097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 47985393 - 47985549
Alignment:
| Q |
48 |
atcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactacc |
147 |
Q |
| |
|
||||||||| ||||||| |||| || ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
47985393 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccgggttctatacttgatactact |
47985492 |
T |
 |
| Q |
148 |
ctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatg |
204 |
Q |
| |
|
|||| ||||| |||||| |||| |||| ||| || |||||||||||||| |||||| |
|
|
| T |
47985493 |
ctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatg |
47985549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 48003967 - 48004123
Alignment:
| Q |
48 |
atcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactacc |
147 |
Q |
| |
|
||||||||| ||||||| |||| || ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
48003967 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccgggttctatacttgatactact |
48004066 |
T |
 |
| Q |
148 |
ctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatg |
204 |
Q |
| |
|
|||| ||||| |||||| |||| |||| ||| || |||||||||||||| |||||| |
|
|
| T |
48004067 |
ctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatg |
48004123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 47994680 - 47994836
Alignment:
| Q |
48 |
atcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactacc |
147 |
Q |
| |
|
||||||||| ||||||| |||| || ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
47994680 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccggattctatacttgatactact |
47994779 |
T |
 |
| Q |
148 |
ctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatg |
204 |
Q |
| |
|
|||| ||||| |||||| |||| |||| ||| || |||||||||||||| |||||| |
|
|
| T |
47994780 |
ctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatg |
47994836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 48013252 - 48013408
Alignment:
| Q |
48 |
atcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactacc |
147 |
Q |
| |
|
||||||||| ||||||| |||| || ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
48013252 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccggattctatacttgatactact |
48013351 |
T |
 |
| Q |
148 |
ctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatg |
204 |
Q |
| |
|
|||| ||||| |||||| |||| |||| ||| || |||||||||||||| |||||| |
|
|
| T |
48013352 |
ctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatg |
48013408 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 222
Target Start/End: Original strand, 4132617 - 4132789
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
||||||||| ||||||| |||||||||| ||||||||||||| ||| ||||||| ||| | ||| ||||||| ||| ||||| || |||||||||| |
|
|
| T |
4132617 |
catcatatatgagataaactgctgtcttcatcacaatgaaactgttcccaaaaac---aacaatctcgactttgtcaccaggttccatatttgatactac |
4132713 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattt |
222 |
Q |
| |
|
||||| | ||| |||| |||||| ||| | || | || |||||||||||||||||||||| ||| |||| |||| |
|
|
| T |
4132714 |
tctctgccactcctcattttcaaaggaggcgaatgcctctctcttatagagctgaatggtagtcttcgtgtgattt |
4132789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 224
Target Start/End: Complemental strand, 25569090 - 25568959
Alignment:
| Q |
93 |
ctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactaccctctgaccctcttcatcttcaaaagagactaacgtatcactctta |
192 |
Q |
| |
|
||||||||||||||| |||||||||||||| || |||||||| ||||||||||| | || ||||| || | |||||| || ||||| | || ||||| |
|
|
| T |
25569090 |
ctcaaaaacaaaaacaacctccactttgtttccaggttctatacttgatactactatatgcccctcctcgttttcaaaggaaactaatgcctctctcttg |
25568991 |
T |
 |
| Q |
193 |
tagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
|||| ||||||||| | ||| ||||||||||| |
|
|
| T |
25568990 |
tagacctgaatggtggacttggtgtaattttt |
25568959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 222
Target Start/End: Original strand, 4319301 - 4319476
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
||||||||| ||||||| |||||||||| ||||||||||||| ||| ||||||| | ||| | |||||| |||| ||| ||||| || ||| ||| || |
|
|
| T |
4319301 |
catcatatatgagataaactgctgtcttcatcacaatgaaactgttcccaaaaacgacaacaatctccaccttgtcaccaggttccatatttgttacaac |
4319400 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattt |
222 |
Q |
| |
|
||||| | ||| |||| |||||| ||| ||| | || ||||||||||| |||||||| | |||||||| |||| |
|
|
| T |
4319401 |
tctctgccactcctcattttcaaaggaggataatgcttctctcttatagagttgaatggtggtctttgtgtgattt |
4319476 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 222
Target Start/End: Original strand, 4122643 - 4122818
Alignment:
| Q |
47 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
146 |
Q |
| |
|
||||||||| ||||||| || ||||||| ||||||||||||| || ||||||||| ||| | ||||||||||| ||| ||||| || ||||||| || |
|
|
| T |
4122643 |
catcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactttgtcaccaggttccatatttgataccac |
4122742 |
T |
 |
| Q |
147 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattt |
222 |
Q |
| |
|
|||| | || |||| ||| || ||| ||||| || ||||||||||| |||||||| | |||||||| |||| |
|
|
| T |
4122743 |
tctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgattt |
4122818 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 224
Target Start/End: Original strand, 7878 - 8053
Alignment:
| Q |
49 |
tcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactaccc |
148 |
Q |
| |
|
||||||| |||||||||| ||| | ||| ||||||||| | | ||||||||| ||| |||||||||||||| |||||||||| |||||||||| |
|
|
| T |
7878 |
tcatatataagataaattgttgtttctttcgcaatgaaaccgtccccaaaaacaacaacaacctccactttgtttccgggttctacacttgatactaaat |
7977 |
T |
 |
| Q |
149 |
tctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaattttt |
224 |
Q |
| |
|
|||| || ||||| | ||| || |||| || ||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
7978 |
tctgcttttcctcatccttaaaggaagctaatgtttcactcttatagatctgaatggtggcctttgtgtaattttt |
8053 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1476 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1476
Description:
Target: scaffold1476; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 142
Target Start/End: Complemental strand, 150 - 43
Alignment:
| Q |
35 |
tcaaatcttgtgcatcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctat |
134 |
Q |
| |
|
|||||||| || |||||||||| ||||||| ||||| || ||||||||| | |||||| |||||| | | ||||||||||| ||||| |||||||| |
|
|
| T |
150 |
tcaaatctggttcatcatatacgagataaaggaatgtctgctctacaatgaaattgttctcataaacaacagcaacctccactttattaccaggttctat |
51 |
T |
 |
| Q |
135 |
gcttgata |
142 |
Q |
| |
|
||||||| |
|
|
| T |
50 |
acttgata |
43 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 22583289 - 22583396
Alignment:
| Q |
35 |
tcaaatcttgtgcatcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctat |
134 |
Q |
| |
|
|||||||| || |||||||||| ||||||| ||||| || ||||||||| | |||||| |||||| | | ||||||||||| ||||| |||||||| |
|
|
| T |
22583289 |
tcaaatctggttcatcatatacgagataaaggaatgtctgctctacaatgaaattgttctcataaacaacagcaacctccactttattaccaggttctat |
22583388 |
T |
 |
| Q |
135 |
gcttgata |
142 |
Q |
| |
|
||||||| |
|
|
| T |
22583389 |
acttgata |
22583396 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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