View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9782A_low_118 (Length: 212)
Name: NF9782A_low_118
Description: NF9782A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9782A_low_118 |
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Alignment Details
Target: chr6 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 23 - 193
Target Start/End: Complemental strand, 9338665 - 9338495
Alignment:
| Q |
23 |
tcatggacttcgggttgcaggttaaacttaatttttaccattttggatgggtcactgcctatttggatttcgacaaagtccccgtttggttttagtcgtt |
122 |
Q |
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| T |
9338665 |
tcatggacttcgggttgcaggtcaaacttaatttttatcattttggatgggtcgctgcctatttggatttcgacaaagtccccgtctggttctagtcgtt |
9338566 |
T |
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| Q |
123 |
ctagattctttattgctttgataagcaacccttcttcgtctttgttgattagccttgtttcgcttccaaca |
193 |
Q |
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||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |
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| T |
9338565 |
ctagattctttattgctttgataagcagcccttcgtcgtctttgttgattagccttgtttcgcttccaaca |
9338495 |
T |
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