View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9782A_low_41 (Length: 280)
Name: NF9782A_low_41
Description: NF9782A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9782A_low_41 |
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Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 24210831 - 24211105
Alignment:
| Q |
1 |
tcaatatttcttcaatggataaactctgattacgtggctaaatccaattcgctacatctagcttacctcttctattcaagataattcccacaaacaccaa |
100 |
Q |
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| T |
24210831 |
tcaatatttcttcaatggataaactctgattacgtggctaaatccaattcgctacatctagcttacctcttctattcaagataattcccacaaacaccaa |
24210930 |
T |
|
| Q |
101 |
actagattaacggtccaaagccaaagataaacattactatgttaatgtttcacaaaccaaaaaacatgttctatagttgaaacaaagagtgtgaacttgt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24210931 |
actagattaacggtccaaagccaaagataaacattactatgtttatgtttcacaaaccaaaaaacatgttctatagttgaaacaaagagtgtgaacttgt |
24211030 |
T |
|
| Q |
201 |
tggaaaatcttaactataaccatccatggttcccactctttcatccaattctttatctcatccaaagttgaattt |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24211031 |
tggaaaatcttaactataaccatccatggttcccactctttcatccaattctttatctcatccaaagttgaattt |
24211105 |
T |
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