View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9782_low_11 (Length: 277)
Name: NF9782_low_11
Description: NF9782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9782_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 2032696 - 2032962
Alignment:
| Q |
1 |
tcaatactatttatacttcactgtgtaaagtgttatattttcaagcaatgtaatgtaac----------tgtttctagcatatatatttaacacaaccct |
90 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
2032696 |
tcaatactatttatacttcactgtgtaaagtgttatattttcaagcaatgtaatgtaactgtttataactgtttctagcatatatatttaacacaaccct |
2032795 |
T |
|
| Q |
91 |
tcaaagtgctaagaggaagtagaaagccaattccactggcaaggcaatgagcattcctaacaagatcctattaacaagaaacaagaacagcatcaaatct |
190 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2032796 |
tcaaagtgctaagaggaagtagaaagccaattccaccggcaaggcaatgagcattcctaacaagatcctattaacaagaaacaagaacagcatcaaatct |
2032895 |
T |
|
| Q |
191 |
taagcaatgtaaaatatatatgtattaaaaagtttatgaaagatgctttgacattactacttacgcagtg |
260 |
Q |
| |
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||| ||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |
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| T |
2032896 |
taaacaatgtaaa--atatatgtatt-aaaagtttatgaaagatgctttgaaattactacttacgcagtg |
2032962 |
T |
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