View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9782_low_14 (Length: 248)
Name: NF9782_low_14
Description: NF9782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9782_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 40070888 - 40071107
Alignment:
| Q |
18 |
aaataagccacggtagcagaaggcggaaaggaagaaagaaagaaggcacgatagcataacagtgcagtcgagagagagttaggaagattaacgaaatcga |
117 |
Q |
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| T |
40070888 |
aaataagccacggtagcagaaggaagaaaggaagaaagaaagaaggcacgatagcataacagtgcagtcgagagagacttaggaagattaacgaaatcga |
40070987 |
T |
|
| Q |
118 |
aatggcttctctacttgcgaaaagagttgcagtaagcgttcacagagtcctcaattcttcgaagccacaatcaaccacactcctcaggcctgtttttcta |
217 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |
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| T |
40070988 |
aatggcttctctacttgtgaaaagagttgcagtaagcgttcacagagtcctcaattcttcgcagccacaatcaaccacactcctcaggcctgtttttgga |
40071087 |
T |
|
| Q |
218 |
tatcataagatttccccttt |
237 |
Q |
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|||||||||||||||||||| |
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| T |
40071088 |
tatcataagatttccccttt |
40071107 |
T |
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