View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9783_high_11 (Length: 349)

Name: NF9783_high_11
Description: NF9783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9783_high_11
NF9783_high_11
[»] chr5 (25 HSPs)
chr5 (11-332)||(4554593-4554913)
chr5 (84-177)||(4555337-4555430)
chr5 (73-146)||(16689589-16689662)
chr5 (78-157)||(4789521-4789600)
chr5 (78-156)||(26712357-26712435)
chr5 (78-156)||(26982095-26982173)
chr5 (77-168)||(26711568-26711660)
chr5 (77-168)||(26981305-26981397)
chr5 (77-170)||(17767546-17767639)
chr5 (75-123)||(9142045-9142093)
chr5 (76-123)||(6803947-6803994)
chr5 (77-146)||(16690369-16690438)
chr5 (100-156)||(6804802-6804858)
chr5 (84-172)||(6805910-6805998)
chr5 (75-177)||(4820452-4820555)
chr5 (77-168)||(6007611-6007702)
chr5 (76-155)||(32943516-32943595)
chr5 (77-148)||(35262452-35262523)
chr5 (77-155)||(32944454-32944532)
chr5 (76-140)||(4790203-4790266)
chr5 (76-143)||(4555442-4555509)
chr5 (76-119)||(6804890-6804933)
chr5 (77-123)||(4301905-4301951)
chr5 (77-123)||(12201377-12201423)
chr5 (90-123)||(42651581-42651614)
[»] chr3 (28 HSPs)
chr3 (76-259)||(38337341-38337526)
chr3 (91-254)||(38336958-38337121)
chr3 (77-171)||(55124414-55124508)
chr3 (77-143)||(33968181-33968247)
chr3 (90-170)||(15450239-15450318)
chr3 (84-177)||(44022035-44022128)
chr3 (77-143)||(45297549-45297615)
chr3 (71-133)||(8439477-8439539)
chr3 (76-170)||(49161763-49161857)
chr3 (90-143)||(27452636-27452689)
chr3 (75-156)||(33454864-33454945)
chr3 (82-123)||(45501296-45501337)
chr3 (76-169)||(49288631-49288724)
chr3 (75-139)||(8652808-8652872)
chr3 (84-143)||(20313412-20313472)
chr3 (75-123)||(33455783-33455831)
chr3 (75-123)||(44021284-44021331)
chr3 (75-119)||(49160985-49161029)
chr3 (77-169)||(49287687-49287779)
chr3 (76-140)||(51421660-51421724)
chr3 (76-123)||(44064188-44064235)
chr3 (102-169)||(44406915-44406982)
chr3 (107-169)||(11267642-11267704)
chr3 (75-113)||(36232866-36232904)
chr3 (84-154)||(52398999-52399069)
chr3 (77-117)||(42108370-42108410)
chr3 (84-156)||(52398330-52398402)
chr3 (76-168)||(54901372-54901464)
[»] chr4 (53 HSPs)
chr4 (77-177)||(6246784-6246884)
chr4 (94-254)||(15481440-15481601)
chr4 (77-177)||(6247418-6247519)
chr4 (91-243)||(10421461-10421615)
chr4 (91-253)||(15481049-15481212)
chr4 (77-146)||(232028-232097)
chr4 (78-171)||(6680296-6680389)
chr4 (107-177)||(50710365-50710435)
chr4 (107-177)||(53664242-53664312)
chr4 (126-177)||(10420966-10421017)
chr4 (90-177)||(30808634-30808721)
chr4 (94-177)||(45331401-45331484)
chr4 (76-146)||(231435-231504)
chr4 (76-154)||(33370846-33370924)
chr4 (239-284)||(6247326-6247371)
chr4 (90-177)||(30809453-30809540)
chr4 (131-173)||(13856645-13856687)
chr4 (77-123)||(25970106-25970152)
chr4 (131-177)||(50709713-50709759)
chr4 (76-169)||(23383309-23383402)
chr4 (75-132)||(54453093-54453150)
chr4 (76-168)||(33463676-33463768)
chr4 (75-143)||(34155608-34155676)
chr4 (73-177)||(34371459-34371562)
chr4 (90-149)||(45330578-45330637)
chr4 (76-123)||(54006727-54006774)
chr4 (75-109)||(51412592-51412626)
chr4 (107-177)||(53665034-53665104)
chr4 (75-123)||(34154792-34154840)
chr4 (75-123)||(41261892-41261940)
chr4 (75-123)||(54008456-54008504)
chr4 (113-172)||(2093865-2093924)
chr4 (75-118)||(20351318-20351361)
chr4 (76-155)||(33369908-33369987)
chr4 (106-177)||(34956313-34956384)
chr4 (76-123)||(39429939-39429986)
chr4 (76-123)||(41261121-41261168)
chr4 (84-123)||(55514356-55514395)
chr4 (77-143)||(32449317-32449383)
chr4 (77-123)||(47326791-47326837)
chr4 (77-123)||(47341587-47341633)
chr4 (119-177)||(50709034-50709092)
chr4 (77-118)||(22062233-22062274)
chr4 (75-143)||(25655620-25655689)
chr4 (78-143)||(36451409-36451474)
chr4 (107-178)||(3847916-3847988)
chr4 (77-156)||(11680276-11680356)
chr4 (77-156)||(11688555-11688635)
chr4 (77-156)||(12590171-12590251)
chr4 (75-123)||(22061328-22061376)
chr4 (75-123)||(23425209-23425257)
chr4 (75-123)||(25970805-25970853)
chr4 (91-123)||(47377600-47377632)
[»] chr1 (38 HSPs)
chr1 (77-177)||(31787478-31787578)
chr1 (93-177)||(11469097-11469181)
chr1 (77-177)||(31788224-31788324)
chr1 (77-177)||(14925290-14925390)
chr1 (91-173)||(11469717-11469799)
chr1 (77-177)||(14924674-14924774)
chr1 (76-177)||(2687675-2687776)
chr1 (77-178)||(46134563-46134665)
chr1 (75-132)||(50950888-50950945)
chr1 (84-172)||(11426860-11426948)
chr1 (77-171)||(4641716-4641810)
chr1 (106-172)||(7463444-7463510)
chr1 (106-172)||(7464023-7464089)
chr1 (107-177)||(38618260-38618330)
chr1 (84-169)||(29334221-29334306)
chr1 (77-178)||(36271400-36271501)
chr1 (75-143)||(38931312-38931380)
chr1 (90-149)||(11031444-11031503)
chr1 (73-172)||(11427460-11427559)
chr1 (76-123)||(42383719-42383766)
chr1 (74-143)||(27420274-27420344)
chr1 (77-123)||(36385668-36385714)
chr1 (106-172)||(37889908-37889974)
chr1 (77-143)||(49420084-49420150)
chr1 (77-178)||(6766974-6767075)
chr1 (239-284)||(11469621-11469666)
chr1 (84-177)||(42384102-42384195)
chr1 (77-113)||(49420967-49421003)
chr1 (90-149)||(11032195-11032254)
chr1 (76-143)||(27418163-27418229)
chr1 (82-137)||(30466187-30466242)
chr1 (76-123)||(41884231-41884278)
chr1 (76-123)||(43317118-43317165)
chr1 (76-123)||(45922231-45922278)
chr1 (76-143)||(47334198-47334265)
chr1 (76-123)||(48835099-48835146)
chr1 (77-123)||(294625-294671)
chr1 (77-123)||(42646040-42646086)
[»] chr8 (24 HSPs)
chr8 (76-177)||(12350602-12350703)
chr8 (77-254)||(43924887-43925066)
chr8 (77-177)||(12349967-12350067)
chr8 (77-177)||(43971278-43971378)
chr8 (77-177)||(43972034-43972134)
chr8 (99-177)||(39257656-39257734)
chr8 (91-177)||(43924504-43924590)
chr8 (76-143)||(40450968-40451035)
chr8 (111-177)||(38686337-38686403)
chr8 (107-177)||(33801529-33801599)
chr8 (107-177)||(33802321-33802391)
chr8 (107-177)||(38687003-38687073)
chr8 (76-120)||(35943075-35943119)
chr8 (77-123)||(35840532-35840578)
chr8 (120-177)||(15183796-15183853)
chr8 (77-177)||(39258397-39258491)
chr8 (77-140)||(27322572-27322635)
chr8 (77-143)||(37562295-37562361)
chr8 (239-284)||(12350114-12350159)
chr8 (77-113)||(35839722-35839758)
chr8 (75-122)||(6012967-6013014)
chr8 (77-112)||(38660076-38660111)
chr8 (76-113)||(33688222-33688259)
chr8 (75-123)||(42346107-42346155)
[»] scaffold0189 (2 HSPs)
scaffold0189 (77-177)||(12807-12907)
scaffold0189 (77-254)||(12184-12364)
[»] chr2 (28 HSPs)
chr2 (77-177)||(4975696-4975796)
chr2 (77-177)||(4993604-4993704)
chr2 (76-177)||(4976453-4976554)
chr2 (76-177)||(4994360-4994461)
chr2 (83-174)||(41519876-41519967)
chr2 (241-332)||(41519748-41519841)
chr2 (77-177)||(42369643-42369743)
chr2 (84-176)||(42370899-42370991)
chr2 (75-143)||(36390955-36391023)
chr2 (93-177)||(37545692-37545776)
chr2 (76-148)||(34617652-34617724)
chr2 (111-177)||(8536171-8536237)
chr2 (107-177)||(8536834-8536904)
chr2 (82-143)||(15602802-15602863)
chr2 (76-123)||(24383064-24383112)
chr2 (82-140)||(36391657-36391715)
chr2 (84-173)||(36718974-36719063)
chr2 (75-143)||(7868123-7868191)
chr2 (100-156)||(41768712-41768768)
chr2 (76-123)||(23876065-23876112)
chr2 (90-149)||(37546540-37546599)
chr2 (75-123)||(6085703-6085751)
chr2 (71-123)||(38740438-38740489)
chr2 (107-178)||(41042572-41042644)
chr2 (77-123)||(2307075-2307121)
chr2 (82-170)||(23875245-23875333)
chr2 (91-143)||(30545417-30545469)
chr2 (77-117)||(44094825-44094865)
[»] chr6 (11 HSPs)
chr6 (91-254)||(27763427-27763591)
chr6 (77-143)||(25371169-25371235)
chr6 (77-125)||(8384018-8384066)
chr6 (77-120)||(16764925-16764968)
chr6 (90-168)||(34034181-34034259)
chr6 (76-156)||(10608288-10608369)
chr6 (77-138)||(29290123-29290184)
chr6 (77-121)||(4311192-4311236)
chr6 (91-123)||(24125986-24126018)
chr6 (75-123)||(25067852-25067900)
chr6 (76-164)||(34035005-34035093)
[»] chr7 (25 HSPs)
chr7 (81-177)||(46757428-46757524)
chr7 (77-177)||(12732247-12732347)
chr7 (90-177)||(27599224-27599311)
chr7 (84-161)||(46759226-46759303)
chr7 (76-143)||(24995851-24995918)
chr7 (90-177)||(27600043-27600130)
chr7 (77-155)||(32548643-32548721)
chr7 (76-120)||(6730162-6730206)
chr7 (75-143)||(42607079-42607147)
chr7 (77-123)||(35771261-35771307)
chr7 (77-170)||(32871095-32871188)
chr7 (83-143)||(24996665-24996725)
chr7 (76-123)||(29060741-29060788)
chr7 (76-123)||(5064647-5064694)
chr7 (84-119)||(9122657-9122692)
chr7 (102-169)||(30915759-30915826)
chr7 (76-119)||(40320416-40320459)
chr7 (77-123)||(14629819-14629865)
chr7 (77-123)||(36844612-36844658)
chr7 (77-143)||(40257580-40257646)
chr7 (77-123)||(40319606-40319652)
chr7 (79-131)||(35770276-35770328)
chr7 (83-143)||(40257784-40257844)
chr7 (75-171)||(40258688-40258784)
chr7 (75-139)||(42607798-42607862)
[»] scaffold0071 (1 HSPs)
scaffold0071 (90-170)||(11873-11952)
[»] scaffold2003 (1 HSPs)
scaffold2003 (76-170)||(486-580)
[»] scaffold0129 (1 HSPs)
scaffold0129 (77-140)||(43203-43266)
[»] scaffold0150 (1 HSPs)
scaffold0150 (77-119)||(14012-14054)
[»] scaffold0119 (1 HSPs)
scaffold0119 (101-145)||(36620-36664)
[»] scaffold0051 (1 HSPs)
scaffold0051 (78-126)||(15058-15106)


Alignment Details
Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 11 - 332
Target Start/End: Original strand, 4554593 - 4554913
Alignment:
Q  11 cagagaaagtggttggagaagataaaaatctagtgtatattaagactgtgatctttacttaatctaggtggggtttagtatgggaaagggaagttgtttc 110  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||     
T  4554593 cagagagagtggttggag--gataaaaatctagtgtatattaagactgtgatctttacttaatctaggtggggtttagtatgggaaaggaaaattgtttt 4554690  T
Q  111 ccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc-acaccagannnnnnnccacactcaccattcgac 209  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||        |||||||||||| || ||    
T  4554691 ccaccatgagaaagctaattttgaccattagataaagtagagaacatacttttatcatagacactcaacaccaggtttttttccacactcaccactcaac 4554790  T
Q  210 aacaacatgcgactgctgcttcaagtctctttcttcctctcattcaaaccttatcagcccaggaaaattgattttccaaaaccattcccttgtcatcgtc 309  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4554791 aacaacatgcgattgctgcttcaagtctctttcttcctctcattcaaaccttatcagcccaggaaaattgattttccaaaaccattcccttgtcaccgtc 4554890  T
Q  310 agttcaacttcaatggcaaaatt 332  Q
    |||||||||||||| ||||||||    
T  4554891 agttcaacttcaatagcaaaatt 4554913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 4555430 - 4555337
Alignment:
Q  84 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||| | || |||||||| ||||||||||||||||| ||||||||||    
T  4555430 tttagtatgggaaagggaagttgtttcctaccatgggaaagctaattttgaacgttggataaagtggagaacatacttttatcgtagacactca 4555337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 16689589 - 16689662
Alignment:
Q  73 tctaggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaa 146  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||| | |||||| || ||||||||||    
T  16689589 tctaggtggggtttagtatgggaaagggaagttctttcccaccatggaaaagtaaattttaactattagataaa 16689662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 4789521 - 4789600
Alignment:
Q  78 gtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacat 157  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| ||| | ||||||||||||| || | ||||||||    
T  4789521 gtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 4789600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 26712435 - 26712357
Alignment:
Q  78 gtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaaca 156  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||  ||||||| ||||| |||| ||||| ||||||    
T  26712435 gtggagtttagcatgggaaagggaagttgtttcccaccatgggaaagctaattttaaccatcagatcaagtaaagaaca 26712357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 26982173 - 26982095
Alignment:
Q  78 gtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaaca 156  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||  ||||||| ||||| |||| ||||| ||||||    
T  26982173 gtggagtttagcatgggaaagggaagttgtttcccaccatgggaaagctaattttaaccatcagatcaagtaaagaaca 26982095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 168
Target Start/End: Original strand, 26711568 - 26711660
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaatttt-gaccattagataaagtagagaacatacttttatcat 168  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||||| | |||||| ||||| ||||| || ||||||||| | |||||||||    
T  26711568 ggtggggtttagtatgggaaaggaaagttgtttcccaacataggaaagtaaattttagaccactagatcaattagagaacacaattttatcat 26711660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 168
Target Start/End: Original strand, 26981305 - 26981397
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaatttt-gaccattagataaagtagagaacatacttttatcat 168  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||||| | |||||| ||||| ||||| || ||||||||| | |||||||||    
T  26981305 ggtggggtttagtatgggaaaggaaagttgtttcccaacataggaaagtaaattttagaccactagatcaattagagaacacaattttatcat 26981397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 77 - 170
Target Start/End: Complemental strand, 17767639 - 17767546
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatag 170  Q
    |||||| |||| |||||||||||   ||||||||||||||||||||| |  |||| ||||||||||| || || |||||||| |||||||||||    
T  17767639 ggtgggatttaatatgggaaaggatcgttgtttcccaccatgggaaagtagatttagaccattagattaactaaagaacatatttttatcatag 17767546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 9142045 - 9142093
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||    
T  9142045 taggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaa 9142093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 6803947 - 6803994
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||    
T  6803947 aggtggggtttagtatgggaaagggaagttgtttcctaccataggaaa 6803994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 16690438 - 16690369
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaa 146  Q
    ||||||||||||||||||||   |||||| ||| ||||||||||||| | |||||| |||||||||||||    
T  16690438 ggtggggtttagtatgggaatatgaagttcttttccaccatgggaaagtaaattttaaccattagataaa 16690369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 6804858 - 6804802
Alignment:
Q  100 gaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaaca 156  Q
    |||||||||||||||||||||||| | ||||||||||||||||| | ||| ||||||    
T  6804858 gaagttgtttcccaccatgggaaagtcaattttgaccattagattaggtaaagaaca 6804802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 6805998 - 6805910
Alignment:
Q  84 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 172  Q
    ||||| |||||||||||||   ||||||||||||||||||| ||||||| ||||| ||||  |  | |||||||| |||||||||||||    
T  6805998 tttagcatgggaaagggaaagagtttcccaccatgggaaaactaattttaaccatcagatttacaaaagaacataattttatcatagac 6805910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 177
Target Start/End: Original strand, 4820452 - 4820555
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa-attaattttgaccattagataaagtagagaacatacttttatcatagaca 173  Q
    |||||||||||||  ||||||||||||| |||||| |||||||||||||  ||  ||||| |||||||||  ||||   |||||| ||||||||| ||||    
T  4820452 taggtggggtttaacatgggaaagggaaattgttttccaccatgggaaattttttttttgtccattagattgagtaagaaacataattttatcatggaca 4820551  T
Q  174 ctca 177  Q
    ||||    
T  4820552 ctca 4820555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 168
Target Start/End: Complemental strand, 6007702 - 6007611
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcat 168  Q
    |||||||||||| ||||||||||||| ||||||||||  |||||||| || |||||| ||||| ||| || || ||| || ||| |||||||    
T  6007702 ggtggggtttagaatgggaaagggaatttgtttcccatgatgggaaagttgattttggccatttgattaaataaagagcacactattatcat 6007611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 155
Target Start/End: Original strand, 32943516 - 32943595
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaac 155  Q
    ||||||| ||||| ||||||||||  | |||||||||||||||||||| ||||| ||  ||||||||| | |||||||||    
T  32943516 aggtgggatttagcatgggaaaggatatttgtttcccaccatgggaaagttaatgttagccattagatcaggtagagaac 32943595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 35262452 - 35262523
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagt 148  Q
    ||||| |||||| ||||||||||  | |||||||| ||||||||||| ||| ||||||||||||||| ||||    
T  35262452 ggtggagtttagcatgggaaaggataattgtttcctaccatgggaaagttatttttgaccattagattaagt 35262523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 32944532 - 32944454
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaac 155  Q
    |||||||||||| |||||||| |  | |||||||||||||||| ||| ||||| ||  ||||||||| |||||||||||    
T  32944532 ggtggggtttagcatgggaaatgatacttgtttcccaccatggaaaagttaatgttagccattagattaagtagagaac 32944454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 4790266 - 4790203
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccatta 140  Q
    ||||||||||||| ||||||||| |  ||||||||||| ||||||||| ||| ||||||||||||    
T  4790266 aggtggggtttaggatgggaaagagg-gttgtttcccatcatgggaaagttatttttgaccatta 4790203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 4555509 - 4555442
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    ||||||||||||| |||||||| ||||||| ||||||| |||| |||| ||||| ||  |||||||||    
T  4555509 aggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagat 4555442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 119
Target Start/End: Original strand, 6804890 - 6804933
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgg 119  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||    
T  6804890 aggtggggtttagcatgggaaagaggagttgtttcccaccatgg 6804933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 4301905 - 4301951
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||||||||| ||||| ||||||||||| ||||||| |||||||||    
T  4301905 ggtggggtttaatatggaaaagggaagttctttcccatcatgggaaa 4301951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 12201377 - 12201423
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||||||||||||||||  |||||||||| |||||| ||||    
T  12201377 ggtggggtttagtatgggaaaggagagttgtttcctaccatgagaaa 12201423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 123
Target Start/End: Complemental strand, 42651614 - 42651581
Alignment:
Q  90 atgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||||||||||||||||||||| |||||    
T  42651614 atgggaaagggaagttgtttcccaccataggaaa 42651581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 259
Target Start/End: Complemental strand, 38337526 - 38337341
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacact 175  Q
    |||||| ||||| | |||||||||||||||||||||||||||||||||  ||||||||||| |||||| || ||||||||||| ||||||||||||||||    
T  38337526 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcatagacact 38337427  T
Q  176 c-acaccaga--nnnnnnnccacactcaccattcgacaacaacatgcgactgctgcttcaagtctctttcttcctctcattcaaacc 259  Q
    | ||||||||         |||||||||||| || |||||||||||| |||||| |||||| |||||||||||||||||||| ||||    
T  38337426 caacaccagatttttttttccacactcaccactcaacaacaacatgc-actgctacttcaactctctttcttcctctcattctaacc 38337341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 91 - 254
Target Start/End: Original strand, 38336958 - 38337121
Alignment:
Q  91 tgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc-acaccaga--nnn 187  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||| |||||| || ||||||||||| |||||||  |||||||| |||||| |         
T  38336958 tggggaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatc--agacactcaacaccaaattttt 38337055  T
Q  188 nnnnccacactcaccattcgacaacaacatgcgactgctgcttcaagtctctttcttcctctcattc 254  Q
        |||||||||||| || |||||||||||  |||||| |||||| ||||||||||||||||||||    
T  38337056 ttttccacactcaccactcaacaacaacatg-aactgctacttcaactctctttcttcctctcattc 38337121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 171
Target Start/End: Original strand, 55124414 - 55124508
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcataga 171  Q
    |||||||||||| |||||||||||||   |||||||||||||||||||| ||| ||||| ||||||| | ||| |||||||| ||||||||||||    
T  55124414 ggtggggtttagcatgggaaagggaaagagtttcccaccatgggaaaataaatattgactattagatcatgtaaagaacatagttttatcataga 55124508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 33968181 - 33968247
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||   |||||||||||||||    
T  33968181 ggtggggtttagcatgggaaagggaacttgtttcccaccatgggaaaatattttttgaccattagat 33968247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 15450239 - 15450318
Alignment:
Q  90 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatag 170  Q
    |||||||||||||   |||||| ||||||||||| ||||| ||||||||||||| |||||||||||||| |||||||||||    
T  15450239 atgggaaagggaaagagtttcc-accatgggaaagttaatcttgaccattagattaagtagagaacatatttttatcatag 15450318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 44022128 - 44022035
Alignment:
Q  84 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattaga-taaagtagagaacatacttttatcatagacactca 177  Q
    ||||| |||| |||||  |||||||| ||||||||||||||  || ||||||||||||| |||| ||| |||||||||||||||||| |||||||    
T  44022128 tttagcatggaaaaggagagttgttttccaccatgggaaaaaaaaatttgaccattagattaaactag-gaacatacttttatcatacacactca 44022035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 45297549 - 45297615
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||| ||  |||| ||||||||||    
T  45297549 ggtggggtttagtatgggaaaggagagttgtttcccatcatgggaaagttttttttaaccattagat 45297615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 8439477 - 8439539
Alignment:
Q  71 aatctaggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttg 133  Q
    |||||||||||||||||||||||| ||| | || | ||||||||||||||||| || ||||||    
T  8439477 aatctaggtggggtttagtatgggtaagtggagatttttcccaccatgggaaagtttattttg 8439539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 170
Target Start/End: Complemental strand, 49161857 - 49161763
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatag 170  Q
    ||||| ||||||| ||||||||||| | |||||||||||||||||||| ||  || ||| |||||||| | |||  ||||||| | |||||||||    
T  49161857 aggtgaggtttagcatgggaaaggggaattgtttcccaccatgggaaagttttttatgagcattagatcatgtaaggaacataatattatcatag 49161763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 27452636 - 27452689
Alignment:
Q  90 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    ||||||||||||| | |||||| ||||||| |||||||| ||||||||||||||    
T  27452636 atgggaaagggaaatagtttcctaccatggaaaaattaaatttgaccattagat 27452689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 33454864 - 33454945
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaaca 156  Q
    |||||||||||||| |||||||||| || ||||||||||||||| |||| ||  |||| ||  |||||| ||||| ||||||    
T  33454864 taggtggggtttagcatgggaaaggaaaattgtttcccaccatgagaaagttttttttaacggttagattaagtaaagaaca 33454945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 45501337 - 45501296
Alignment:
Q  82 ggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||||||||||||||||| |||||||| |||||||||||||    
T  45501337 ggtttagtatgggaaaggggagttgttttccaccatgggaaa 45501296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 169
Target Start/End: Complemental strand, 49288724 - 49288631
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcata 169  Q
    |||||||||||||||||||||||  ||||||| |||||||||| ||||  ||||||  ||  |||||| ||||| | |||||| | ||||||||    
T  49288724 aggtggggtttagtatgggaaagcaaagttgtctcccaccatgagaaagctaatttaaacggttagattaagtataaaacatagtcttatcata 49288631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 8652808 - 8652872
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccatt 139  Q
    |||||||||||||| ||||||||||| | | | |||||||||||||||| | |||||| ||||||    
T  8652808 taggtggggtttagcatgggaaaggggaatcggttcccaccatgggaaagtaaattttcaccatt 8652872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 20313472 - 20313412
Alignment:
Q  84 tttagtatgggaaagggaagttgtttcccaccatgggaaaatt-aattttgaccattagat 143  Q
    |||||||||||||||||||||  ||||||| ||||||||||||  ||||| ||||||||||    
T  20313472 tttagtatgggaaagggaagtattttcccatcatgggaaaattggatttttaccattagat 20313412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 33455831 - 33455783
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||||||| ||||||||||| | |||||||||||||| |||||    
T  33455831 taggtggggtttagcatgggaaaggggaattgtttcccaccataggaaa 33455783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 44021284 - 44021331
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||||    
T  44021284 taggtggggtttagcatgggaaaga-aagttgtttcccaccatgggaaa 44021331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 49160985 - 49161029
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgg 119  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||    
T  49160985 taggtggggtttagcatgggaaaggggagttgtttcctaccatgg 49161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 169
Target Start/End: Original strand, 49287687 - 49287779
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcata 169  Q
    |||||| |||| ||| ||||||  ||||||||||| || ||||||||||||||||  ||  |||||| ||||| |||||||| | ||||||||    
T  49287687 ggtgggatttaatataggaaagtaaagttgtttcctactatgggaaaattaatttaaacggttagattaagtatagaacatagtcttatcata 49287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 51421724 - 51421660
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccatta 140  Q
    ||||||||||||| ||| ||||||| | |||||||||||||||||||| | |||||  |||||||    
T  51421724 aggtggggtttagcatgagaaaggggaattgtttcccaccatgggaaagtcaatttgaaccatta 51421660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 44064188 - 44064235
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||||||| |||||||| ||||||||||| ||||||| |||||||||    
T  44064188 aggtggggtatagtatggaaaagggaagttctttcccatcatgggaaa 44064235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 44406982 - 44406915
Alignment:
Q  102 agttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcata 169  Q
    |||||||||||||||||||||| | ||||||  ||||||||| || |  ||| |||||||||||||||    
T  44406982 agttgtttcccaccatgggaaagtaaattttacccattagatcaaatgaagaccatacttttatcata 44406915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 11267704 - 11267642
Alignment:
Q  107 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcata 169  Q
    ||||| ||||||||||||| |||||| |||||||||| || || ||| |||||| ||||||||    
T  11267704 tttcctaccatgggaaaataaattttaaccattagattaaataaagagcatactcttatcata 11267642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 113
Target Start/End: Original strand, 36232866 - 36232904
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttccca 113  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  36232866 taggtggggtttagtatgggaaaggaaagttctttccca 36232904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 52399069 - 52398999
Alignment:
Q  84 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaa 154  Q
    ||||| |||| ||||||||   |||||||| ||||||||| | ||||||||||||||||| || |||||||    
T  52399069 tttagcatggaaaagggaaagagtttcccatcatgggaaagtaaattttgaccattagattaaatagagaa 52398999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 42108370 - 42108410
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccat 117  Q
    ||||| ||||| | |||||||||||||||||||||||||||    
T  42108370 ggtggcgtttaatttgggaaagggaagttgtttcccaccat 42108410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 52398330 - 52398402
Alignment:
Q  84 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaaca 156  Q
    ||||| |||| ||||||||   |||||||||||||| ||| | |||||| |||||||||| || |||||||||    
T  52398330 tttagaatggaaaagggaaagagtttcccaccatggaaaagtaaattttaaccattagattaaatagagaaca 52398402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 54901464 - 54901372
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcat 168  Q
    ||||||||||||| ||| ||||||||| |||||| |||  |||||||| || |||||| ||||| ||| || || ||| || ||| |||||||    
T  54901464 aggtggggtttagaatgagaaagggaatttgttttccatgatgggaaacttgattttggccatttgattaaataaagagcacactattatcat 54901372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 6246784 - 6246884
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    ||||| ||||| | |||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6246784 ggtggcgtttaatttgggaaagggaaattgtttcccaccatgggaaagttaattttgaccattagataaggtagagaacatacttttatcatagacactc 6246883  T
Q  177 a 177  Q
    |    
T  6246884 a 6246884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 94 - 254
Target Start/End: Complemental strand, 15481601 - 15481440
Alignment:
Q  94 gaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc-acaccaga-nnnnnnn 191  Q
    ||||||||||||||||||||| ||||||||| |||||||||||  ||||| || ||||||||||| |||||||||||| |||| ||||||||            
T  15481601 gaaagggaagttgtttcccacaatgggaaaactaattttgaccggtagattaaatagagaacatatttttatcatagaaactcaacaccagatttttttt 15481502  T
Q  192 ccacactcaccattcgacaacaacatgcgactgctgcttcaagtctctttcttcctctcattc 254  Q
    |||||||||||| || |||||||||||| |||||| |||||| ||||||||||||||||||||    
T  15481501 ccacactcaccactcaacaacaacatgc-actgctacttcaactctctttcttcctctcattc 15481440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 6247519 - 6247418
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatac-ttttatcatagacact 175  Q
    ||||| ||||| | |||||||||||||||||||| || |||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  6247519 ggtggcgtttaatttgggaaagggaagttgtttctcatcatgggaaaactaattttgatcattagataaagtagagaacatactttttatcatagacact 6247420  T
Q  176 ca 177  Q
    ||    
T  6247419 ca 6247418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 243
Target Start/End: Complemental strand, 10421615 - 10421461
Alignment:
Q  91 tgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc-acaccaga--nnn 187  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||| |||||| || ||||||||||| ||||||||||||||||| ||||||||         
T  10421615 tgggaaagggaagttgttttccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcatagacactcaacaccagattttt 10421516  T
Q  188 nnnnccacactcaccattcgacaacaacatgcgactgctgcttcaagtctctttct 243  Q
        |||||||||||| || |||||||||||| ||||||  ||||| |||||||||    
T  10421515 ttttccacactcaccactcaacaacaacatgc-actgctatttcaactctctttct 10421461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 253
Target Start/End: Original strand, 15481049 - 15481212
Alignment:
Q  91 tgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc-acacc-agannnn 188  Q
    |||| |||||||||||||||||  |||||||||  ||||||||||| |||||| || ||||||||||| ||||||||||||| ||| ||||| | |        
T  15481049 tggggaagggaagttgtttcccgtcatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcatagactctcaacaccaaaaaaaa 15481148  T
Q  189 nnnccacactcaccattcgacaacaacatgcgactgctgcttcaagtctctttcttcctctcatt 253  Q
       |||||||||||| || |||||||||||| |||||| |||||| |||||||||||||||||||    
T  15481149 attccacactcaccactcaacaacaacatgc-actgctacttcaactctctttcttcctctcatt 15481212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 232097 - 232028
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaa 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||    
T  232097 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattagataaa 232028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 171
Target Start/End: Complemental strand, 6680389 - 6680296
Alignment:
Q  78 gtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcataga 171  Q
    ||||||||||| |||||||||||||   ||||| |||||||||||| | ||| ||||||||||||| ||||| |||||||| ||||||||||||    
T  6680389 gtggggtttagcatgggaaagggaaagagtttctcaccatgggaaagtaaatattgaccattagattaagtaaagaacatagttttatcataga 6680296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 50710435 - 50710365
Alignment:
Q  107 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||||||||||||| | ||| |||||||||||||||||||||||||||   |||||||||||||||||    
T  50710435 tttcccaccatgggaaagtaaatattgaccattagataaagtagagaacatgaatttatcatagacactca 50710365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 53664242 - 53664312
Alignment:
Q  107 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||||||||||||| | ||| |||||||||||||||| ||||||||||  ||||||||||||||||||    
T  53664242 tttcccaccatgggaaagtaaatattgaccattagataaaatagagaacatggttttatcatagacactca 53664312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 10420966 - 10421017
Alignment:
Q  126 taattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  10420966 taattttgaccattagataaactagataacatacttttatcatagacactca 10421017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 30808634 - 30808721
Alignment:
Q  90 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||||||  |||||||||||||||||||||| |||| |||||||||||||| |||||  ||| | | | ||||||||||||||||    
T  30808634 atgggaaaggagagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaatacattcttatcatagacactca 30808721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 45331484 - 45331401
Alignment:
Q  94 gaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||| ||||||||||||||||| |||| |||| |||||||||||||| |||||  ||||| | | ||||||||||||||||    
T  45331484 gaaaggggagttgtttcccaccatgagaaagttaaatttgaccattagattaagtaatgaacacattcttatcatagacactca 45331401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 231435 - 231504
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaa 146  Q
    |||||||||||||||||||||||||||||||||| | |||||||| ||| |||||||  ||||||||||||    
T  231435 aggtggggtttagtatgggaaagggaagttgttttctaccatggg-aaagtaattttatccattagataaa 231504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 154
Target Start/End: Complemental strand, 33370924 - 33370846
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaa 154  Q
    ||||||||||||| ||||||||||  | |||||||||||||||||||| ||||| ||  ||||||||| ||||||||||    
T  33370924 aggtggggtttagcatgggaaaggatacttgtttcccaccatgggaaagttaatgttagccattagatcaagtagagaa 33370846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 6247371 - 6247326
Alignment:
Q  239 tttcttcctctcattcaaaccttatcagcccaggaaaattgatttt 284  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  6247371 tttcttcctctcattcaaaccttatcagctcaggaaaattgatttt 6247326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 30809540 - 30809453
Alignment:
Q  90 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||||||| |||||||| |||||||| |||| |||| |||||||| ||||| |||||  ||||| | ||||||||||||| ||||    
T  30809540 atgggaaaggggagttgttttccaccatgagaaagttaaatttgaccactagattaagtaatgaacacatttttatcatagactctca 30809453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 13856645 - 13856687
Alignment:
Q  131 ttgaccattagataaagtagagaacatacttttatcatagaca 173  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  13856645 ttgaccattagataaagtagagaacatacctttatcatagaca 13856687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 25970106 - 25970152
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  25970106 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaa 25970152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 50709713 - 50709759
Alignment:
Q  131 ttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  50709713 ttgactattagataaagtagagaacatagttttatcatagacactca 50709759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 169
Target Start/End: Original strand, 23383309 - 23383402
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcata 169  Q
    ||||||||||||| ||| ||||||  |||||||||||||||||||||| ||||||||  ||||| ||| || |  |||||| ||| ||||||||    
T  23383309 aggtggggtttagaatgagaaaggagagttgtttcccaccatgggaaagttaattttatccattcgatcaaatgaagaacacactcttatcata 23383402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 54453093 - 54453150
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaatttt 132  Q
    |||||||||||||| ||||||| |||||||||||||||| ||||| ||||||| ||||    
T  54453093 taggtggggtttagcatgggaatgggaagttgtttcccatcatggaaaaattattttt 54453150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 168
Target Start/End: Original strand, 33463676 - 33463768
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcat 168  Q
    ||||||||||||| ||||||||||||| |||||| |||  ||||||||||| |||||| ||||| ||| || || ||| || ||| |||||||    
T  33463676 aggtggggtttagaatgggaaagggaatttgttttccatgatgggaaaattgattttggccatttgattaaataaagagcacactattatcat 33463768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 34155676 - 34155608
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||| ||| |   |||||||||||||||    
T  34155676 taggtggggtttagcatgggaaagggaacttgttttccaccatggaaaagtattttttgaccattagat 34155608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 177
Target Start/End: Original strand, 34371459 - 34371562
Alignment:
Q  73 tctaggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 172  Q
    |||| ||||||||||  ||||||||||| | |||||||||||||||||||| ||  ||||| |||||||||  ||||   |||||| ||||||||| |||    
T  34371459 tctaagtggggtttaa-atgggaaaggggaattgtttcccaccatgggaaagttttttttgtccattagattgagtaagaaacataattttatcatggac 34371557  T
Q  173 actca 177  Q
    |||||    
T  34371558 actca 34371562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 45330578 - 45330637
Alignment:
Q  90 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagta 149  Q
    ||||||||||| |||||||||||||||||| ||| |||| |||||||| ||||| |||||    
T  45330578 atgggaaaggggagttgtttcccaccatggaaaagttaaatttgaccactagattaagta 45330637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 54006727 - 54006774
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  54006727 aggtgaggtttagtatgggaatgggaagttgtttcccatcatgggaaa 54006774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 51412592 - 51412626
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgttt 109  Q
    |||||||||||||||||||||||||||||||||||    
T  51412592 taggtggggtttagtatgggaaagggaagttgttt 51412626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 53665104 - 53665034
Alignment:
Q  107 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    |||||||||||   ||| | ||| |||||||||| ||||||||||||||||  ||||||||||||||||||    
T  53665104 tttcccaccataaaaaagtaaatattgaccattaaataaagtagagaacatggttttatcatagacactca 53665034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 34154792 - 34154840
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||||||| |||||||| | || ||||||||||||||||||||    
T  34154792 taggtggggtttagcatgggaaaagaaacttgtttcccaccatgggaaa 34154840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 41261940 - 41261892
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||||||||||||||||||||| |  |||||||||| |||||||||||    
T  41261940 taggtggggtttagtatgggaaatgagagttgtttcctaccatgggaaa 41261892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 54008504 - 54008456
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||| ||||||||||||||| |||||||||||||| | |||||||||    
T  54008504 taggtgaggtttagtatgggaatgggaagttgtttccaatcatgggaaa 54008456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 2093924 - 2093865
Alignment:
Q  113 accatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 172  Q
    ||||||||||| ||| | |||| |||||||| || || ||||||||||||||||||||||    
T  2093924 accatgggaaagttattattgatcattagatcaaatatagaacatacttttatcatagac 2093865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 20351361 - 20351318
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatg 118  Q
    |||||||||||||||||||||| ||  |||||||||||||||||    
T  20351361 taggtggggtttagtatgggaatggagagttgtttcccaccatg 20351318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 155
Target Start/End: Original strand, 33369908 - 33369987
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaac 155  Q
    ||||||| ||||| |||||||| |  | |||||||||||||||||||| ||||| ||  ||||||||| | |||||||||    
T  33369908 aggtgggatttagcatgggaaatgatatttgtttcccaccatgggaaagttaatgttagccattagatcaggtagagaac 33369987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 34956313 - 34956384
Alignment:
Q  106 gtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||||  || ||||| |||||||||||| |||||| ||||| |||||| | ||||||||||||| ||||    
T  34956313 gtttcccattataggaaagttaattttgacccttagatcaagtaaagaacacatttttatcatagactctca 34956384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 39429986 - 39429939
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||||||||||| ||||||| ||  ||||||||||||||||||||||    
T  39429986 aggtggggtttagcatgggaatggagagttgtttcccaccatgggaaa 39429939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 41261121 - 41261168
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||| ||||||| |||||||||| ||||||||| |||||||||||||    
T  41261121 aggtgaggtttagcatgggaaaggaaagttgttttccaccatgggaaa 41261168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 55514395 - 55514356
Alignment:
Q  84 tttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  55514395 tttagcatgggaaaggaaagttgtttcccaccatgggaaa 55514356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 32449317 - 32449383
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||||| ||||||||||||||||  | |||||||||||||||| |||||   ||||||| |||||||    
T  32449317 ggtgggatttagtatgggaaaggatacttgtttcccaccatggaaaaatattttttgacaattagat 32449383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 47326837 - 47326791
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||| || ||| |||||||||| |||||||||||||||||||||||    
T  47326837 ggtggagtatagcatgggaaaggaaagttgtttcccaccatgggaaa 47326791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 47341633 - 47341587
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||| || ||| |||||||||| |||||||||||||||||||||||    
T  47341633 ggtggagtatagcatgggaaaggaaagttgtttcccaccatgggaaa 47341587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 50709034 - 50709092
Alignment:
Q  119 ggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||| |||||||||||| |||||| ||||| |||||| | ||||||||||||| ||||    
T  50709034 ggaaagttaattttgacccttagatcaagtaaagaacacatttttatcatagactctca 50709092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 22062274 - 22062233
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatg 118  Q
    ||||||||||||||||| |||||| | |||||||||||||||    
T  22062274 ggtggggtttagtatggaaaaggggaattgtttcccaccatg 22062233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 25655689 - 25655620
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaatta-attttgaccattagat 143  Q
    ||||||||||||| | ||||||||   |||| ||||||||||||||||| |||  |||||||||||||||    
T  25655689 taggtggggtttaatttgggaaagactagttttttcccaccatgggaaagttagtttttgaccattagat 25655620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 36451474 - 36451409
Alignment:
Q  78 gtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    ||||||||||| ||||||||| | ||||||||| |||||||| ||| || ||| || |||||||||    
T  36451474 gtggggtttagcatgggaaagaggagttgtttctcaccatggaaaagttgattatgtccattagat 36451409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 3847916 - 3847988
Alignment:
Q  107 tttcccaccatgggaaaat-taattttgaccattagataaagtagagaacatacttttatcatagacactcac 178  Q
    ||||||||||||||||| | |  ||||||||||||||| || || ||| |||| | |||||||||||||||||    
T  3847916 tttcccaccatgggaaagtatttttttgaccattagatcaaatatagaccataatgttatcatagacactcac 3847988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 11680276 - 11680356
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaatta-attttgaccattagataaagtagagaaca 156  Q
    |||| |||||| | |||||||||  |||| ||||||||||||||||| |||  ||||||||||||||| || ||| |||||    
T  11680276 ggtgaggtttaatttgggaaaggttagttttttcccaccatgggaaagttagtttttgaccattagattaaatagggaaca 11680356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 11688555 - 11688635
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaatta-attttgaccattagataaagtagagaaca 156  Q
    |||| |||||| | |||||||||  |||| ||||||||||||||||| |||  ||||||||||||||| || ||| |||||    
T  11688555 ggtgaggtttaatttgggaaaggttagttttttcccaccatgggaaagttagtttttgaccattagattaaatagggaaca 11688635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 12590251 - 12590171
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaatta-attttgaccattagataaagtagagaaca 156  Q
    ||||||||||| | |||||||||  |||| ||| ||||||||||||| |||  ||||||||||||||| || ||| |||||    
T  12590251 ggtggggtttaatttgggaaaggctagtttttttccaccatgggaaagttagtttttgaccattagattaaatagggaaca 12590171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 22061328 - 22061376
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||| ||||||| || |||| |||||||||||| |||||||||||||    
T  22061328 taggtgaggtttagcattggaaggggaagttgttttccaccatgggaaa 22061376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 23425257 - 23425209
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||  ||||||||||||| ||  ||||||||||||||||||||||    
T  23425257 taggtggcatttagtatgggaatggagagttgtttcccaccatgggaaa 23425209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 25970853 - 25970805
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||  |||||||||||||| || ||||||||||||||||| ||||    
T  25970853 taggtggcatttagtatgggaaaagggagttgtttcccaccatgagaaa 25970805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 123
Target Start/End: Complemental strand, 47377632 - 47377600
Alignment:
Q  91 tgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||| ||||||||||||||||||||||    
T  47377632 tgggaaaggggagttgtttcccaccatgggaaa 47377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 31787478 - 31787578
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    ||||| |||||||||||||| |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31787478 ggtggcgtttagtatgggaatgggaagttgtttcccaccatggaaaagctaattttgaccattagataaagtagagaacatacttttatcatagagactc 31787577  T
Q  177 a 177  Q
    |    
T  31787578 a 31787578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 11469097 - 11469181
Alignment:
Q  93 ggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11469097 ggaaagggaagttgtttcccaccatgggaaagctaattttgaccattagataaggtagagaacatacttttatcatagacactca 11469181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 31788324 - 31788224
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    |||| ||||||||||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||| |||||||||||    
T  31788324 ggtgaggtttagtatgggaatgagaagttgtttcccaccatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacactc 31788225  T
Q  177 a 177  Q
    |    
T  31788224 a 31788224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 14925390 - 14925290
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    ||||| ||||| | |||| |||| |||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14925390 ggtggcgtttaatttggggaaggaaagttgtttcccaccatgggaaagctaattttgaccattagataaactagagaacatacttttatcatagacactc 14925291  T
Q  177 a 177  Q
    |    
T  14925290 a 14925290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 11469799 - 11469717
Alignment:
Q  91 tgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagaca 173  Q
    |||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11469799 tgggaaagggaagttgtttttcaccatggaaaaactaattttgaccattagataaagtagagaacatacttttatcatagaca 11469717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 14924674 - 14924774
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    ||||| ||||| | |||||||||||||||||||||||||||||||||  ||||||||||| ||| || || ||||||||||| |||||||||||||||||    
T  14924674 ggtggtgtttaatttgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttaaattaaatagagaacatatttttatcatagacactc 14924773  T
Q  177 a 177  Q
    |    
T  14924774 a 14924774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 2687776 - 2687675
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacact 175  Q
    ||||||||||||| ||||||||||  | |||||||||||||||||||||||| |||||||  |||||| || ||  ||||||| ||||||||||||| ||    
T  2687776 aggtggggtttagcatgggaaaggataattgtttcccaccatgggaaaattatttttgacagttagattaactaaggaacatagttttatcatagactct 2687677  T
Q  176 ca 177  Q
    ||    
T  2687676 ca 2687675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 178
Target Start/End: Complemental strand, 46134665 - 46134563
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaa-ttaattttgaccattagataaagtagagaacatacttttatcatagacact 175  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| ||| |||| |||||||||| || || ||| |||  | |||||| |||||||    
T  46134665 ggtgtggtttagtatgggaaagggaagttgtttcccatcatgggaaaacttactttttaccattagatcaaatatagaccatgatgttatcaaagacact 46134566  T
Q  176 cac 178  Q
    |||    
T  46134565 cac 46134563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 50950945 - 50950888
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaatttt 132  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||||    
T  50950945 taggtggggtttagcatgggaatgggaagttgtttcccaccataggaaaattattttt 50950888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 11426860 - 11426948
Alignment:
Q  84 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 172  Q
    ||||| |||| ||||||||   ||||||||||||||||||  |||||||||||||||||| || || |||||| | |||||||||||||    
T  11426860 tttagcatggaaaagggaaagagtttcccaccatgggaaagctaattttgaccattagattaactaaagaacacagttttatcatagac 11426948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 171
Target Start/End: Complemental strand, 4641810 - 4641716
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcataga 171  Q
    ||||| |||||| ||||||||||| | ||||||||||||| |||||| | | |||  |||||| ||| || ||||||||||| ||||||||||||    
T  4641810 ggtggagtttagcatgggaaaggggaattgtttcccaccaagggaaagtaattttcaaccattggatcaaatagagaacatagttttatcataga 4641716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 7463444 - 7463510
Alignment:
Q  106 gtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 172  Q
    ||||||||||||||||||  |||||||||||||||||| || || |||||| | |||||||||||||    
T  7463444 gtttcccaccatgggaaagctaattttgaccattagattaaataaagaacacagttttatcatagac 7463510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 7464089 - 7464023
Alignment:
Q  106 gtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 172  Q
    ||||||||||||||||||| ||||||||||||| |||| || ||||||||| |  ||||||||||||    
T  7464089 gtttcccaccatgggaaaactaattttgaccatcagattaactagagaacacaactttatcatagac 7464023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 38618260 - 38618330
Alignment:
Q  107 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||||||||||||| |||| |||||||||||||| |||||| ||||| | | ||||||||||| ||||    
T  38618260 tttcccaccatgggaaagttaagtttgaccattagattaagtagtgaacacattcttatcatagactctca 38618330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 29334221 - 29334306
Alignment:
Q  84 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcata 169  Q
    ||||| ||||||| ||  |||||||||||||||||||||| | ||||||  ||||||||| || || ||| |||||||||||||||    
T  29334221 tttagcatgggaatggatagttgtttcccaccatgggaaagtaaattttacccattagatcaaataaagaccatacttttatcata 29334306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 178
Target Start/End: Original strand, 36271400 - 36271501
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    ||||||||||||||||  |||||||| |||||| ||| ||||| ||| ||  |||| |||||||||| || || ||| |||| | |||||||||||||||    
T  36271400 ggtggggtttagtatgaaaaagggaaattgttttccatcatggaaaagtttttttttaccattagatcaaatatagaccataatattatcatagacactc 36271499  T
Q  177 ac 178  Q
    ||    
T  36271500 ac 36271501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 38931312 - 38931380
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||||||||||||| ||| ||||||| | |||||||||||||||||||| | |||||  ||||||||||    
T  38931312 taggtggggtttagcatgagaaaggggaattgtttcccaccatgggaaagtcaatttgaaccattagat 38931380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 11031444 - 11031503
Alignment:
Q  90 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagta 149  Q
    ||||||||||| | | |||||||||||||||||| |||| |||||||||||||| |||||    
T  11031444 atgggaaaggggaatagtttcccaccatgggaaagttaaatttgaccattagattaagta 11031503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 11427559 - 11427460
Alignment:
Q  73 tctaggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 172  Q
    |||||||||  ||||| |||| ||||||||   |||| | |||||||||||| ||||||||||||| |||| || ||||||||| |  ||||||||||||    
T  11427559 tctaggtggcatttagcatggaaaagggaaagagttttctaccatgggaaaactaattttgaccatcagattaactagagaacacaactttatcatagac 11427460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 42383719 - 42383766
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||||||||||||||||||||| |||||||||||| | |||||||||    
T  42383719 aggtggggtttagtatgggaaagagaagttgtttcctatcatgggaaa 42383766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 27420344 - 27420274
Alignment:
Q  74 ctaggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa-attaattttgaccattagat 143  Q
    |||||||||| |||| ||||| |||||||||| ||||||||||||| ||| |||  |||||||||||||||    
T  27420344 ctaggtgggggttagcatgggtaagggaagttatttcccaccatggaaaatattttttttgaccattagat 27420274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 36385668 - 36385714
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  36385668 ggtggggtttagtatggaaaagggaagttgttttccatcatgggaaa 36385714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 37889908 - 37889974
Alignment:
Q  106 gtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 172  Q
    ||||||||||||||||||   ||||||||||||||||| || || |||||| | |||||||||||||    
T  37889908 gtttcccaccatgggaaagcgaattttgaccattagattaactaaagaacacagttttatcatagac 37889974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 49420084 - 49420150
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||| |||||||||||||||||| |||||||||||||  ||||||||  |  |||||||||||||||    
T  49420084 ggtgaggtttagtatgggaaaggaaagttgtttcccatgatgggaaagctttttttgaccattagat 49420150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 178
Target Start/End: Original strand, 6766974 - 6767075
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    ||||| ||||||||||| |||||| | |||||| ||| ||||| ||| ||  |||| |||||||||| || || ||| |||| | |||||||||||||||    
T  6766974 ggtggagtttagtatggaaaaggggaattgttttccatcatggaaaagttttttttaaccattagatcaaatatagaccataatattatcatagacactc 6767073  T
Q  177 ac 178  Q
    ||    
T  6767074 ac 6767075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 11469666 - 11469621
Alignment:
Q  239 tttcttcctctcattcaaaccttatcagcccaggaaaattgatttt 284  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||    
T  11469666 tttcttcctctcattcaaaccttattagcttaggaaaattgatttt 11469621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 42384195 - 42384102
Alignment:
Q  84 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||||||||||||  | |||||||| | ||||||||| ||  || ||||||||||||  | ||  |||||| |||||||||||||||||||    
T  42384195 tttagtatgggaaaggatacttgtttcctatcatgggaaagttttttctgaccattagatttaataaggaacatgcttttatcatagacactca 42384102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 49421003 - 49420967
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttccca 113  Q
    |||| ||||||||||||||||||||||||||||||||    
T  49421003 ggtgaggtttagtatgggaaagggaagttgtttccca 49420967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 11032254 - 11032195
Alignment:
Q  90 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagta 149  Q
    ||||||||||| | | |||||||||||||||||| || | |||||||||||||| |||||    
T  11032254 atgggaaaggggaatagtttcccaccatgggaaagttgaatttgaccattagattaagta 11032195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 27418163 - 27418229
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    ||||| ||||||||||||||||||||| |||||||||||||||  ||| | | |||| ||||||||||    
T  27418163 aggtgaggtttagtatgggaaagggaa-ttgtttcccaccatgaaaaagtaatttttaaccattagat 27418229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 30466187 - 30466242
Alignment:
Q  82 ggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgacca 137  Q
    ||||||| ||||||| ||| |||||||||||||||||||||| |  ||||||||||    
T  30466187 ggtttagcatgggaatggggagttgtttcccaccatgggaaagtagattttgacca 30466242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 41884278 - 41884231
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||||||||||| |||| |||||||| |||||||||||||| |||||    
T  41884278 aggtggggtttagcatggaaaagggaaattgtttcccaccataggaaa 41884231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 43317165 - 43317118
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||||||||||| ||||||| | |||||||||||||| |||||||||    
T  43317165 aggtggggtttagcatgggaatgagaagttgtttcccatcatgggaaa 43317118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 45922231 - 45922278
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||| |||||  |||||||||||| |||||||||||||||||||||    
T  45922231 aggtggagtttaacatgggaaagggaggttgtttcccaccatgggaaa 45922278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 47334198 - 47334265
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||||||||||||  ||| |||||| ||||||||||||| |||||||| || ||| || |||||||||    
T  47334198 aggtggggtttagcctggaaaaggggagttgtttcccacaatgggaaagttgattatgtccattagat 47334265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 48835146 - 48835099
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||||||||||| ||||||||||| | |||||| |||||||||||||    
T  48835146 aggtggggtttagcatgggaaaggggaattgttttccaccatgggaaa 48835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 294625 - 294671
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||| |||||||||||||| ||| |||| |||||||||||||||||    
T  294625 ggtggcgtttagtatgggaatggggagttttttcccaccatgggaaa 294671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 42646086 - 42646040
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||||||||||||||||||||| |||| |||  ||||||||    
T  42646086 ggtggggtttagtatgggaaagggaagtagttttccataatgggaaa 42646040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 7e-34; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 12350703 - 12350602
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacact 175  Q
    |||||| ||||| | |||||||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12350703 aggtggcgtttaatttgggaaagggaaattgtttcccaccatgggaaacctaattttgaccattagataaggtagagaacatacttttatcatagacact 12350604  T
Q  176 ca 177  Q
    ||    
T  12350603 ca 12350602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 77 - 254
Target Start/End: Complemental strand, 43925066 - 43924887
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    ||||| ||||| | |||||||||||||||||||||||||||| |||| |||||||||||| |||||| || ||||||||||| |||||||||||||||||    
T  43925066 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgagaaagttaattttgaccgttagattaaatagagaacatatttttatcatagacactc 43924967  T
Q  177 -acaccaga--nnnnnnnccacactcaccattcgacaacaacatgcgactgctgcttcaagtctctttcttcctctcattc 254  Q
     ||||||||         |||||||||||| || |||||||||||| || ||| |||||| ||||||| ||||||||||||    
T  43924966 aacaccagatttttttttccacactcaccactcaacaacaacatgc-accgctacttcaactctcttttttcctctcattc 43924887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 12349967 - 12350067
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    ||||| ||||| | ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  12349967 ggtggcgtttaatttgggaaagggaagttgtttcccaccatggaaaaactaattttaaccattagataaagtaaagaacatgcttttatcatagacactc 12350066  T
Q  177 a 177  Q
    |    
T  12350067 a 12350067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 43971278 - 43971378
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    ||||| ||||||||||| || | ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  43971278 ggtggcgtttagtatggaaatgagaagttgtttcccaccatgggaaagctaattttgaccattaaataaagtagagaacatacttttatcatagagactc 43971377  T
Q  177 a 177  Q
    |    
T  43971378 a 43971378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 43972134 - 43972034
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    |||| ||||||||||| ||| | ||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||||||| |||||||||||    
T  43972134 ggtgaggtttagtatgagaatgagaagttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacactc 43972035  T
Q  177 a 177  Q
    |    
T  43972034 a 43972034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 39257656 - 39257734
Alignment:
Q  99 ggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  39257656 ggaagttgtttcccaccatgggaaagctaattttgaccattaaataaagtagagaacatacttttatcatagagactca 39257734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 43924504 - 43924590
Alignment:
Q  91 tgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    |||||||||||||||||||||||||||||||||  ||||||||||| |||||| || ||||||||||| |||||||||| |||||||    
T  43924504 tgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcataaacactca 43924590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 40451035 - 40450968
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||| | |||||| ||||||||||    
T  40451035 aggtggggtttagtatgggaaatgtaagttgtttcccaccatgggaaagtaaattttaaccattagat 40450968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 38686337 - 38686403
Alignment:
Q  111 ccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||  ||||||||||||||||||    
T  38686337 ccaccatgggaaagtaaatattgaccattagataaagtagagaacatggttttatcatagacactca 38686403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 33801529 - 33801599
Alignment:
Q  107 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||||||||| ||| | ||| |||||||||| ||||||||||||||||  ||||||||||||||||||    
T  33801529 tttcccaccatggaaaagtaaatattgaccattaaataaagtagagaacatggttttatcatagacactca 33801599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 33802391 - 33802321
Alignment:
Q  107 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||||||||||||| | ||| |||||||||| ||||| ||||||||||  ||||||||||||||||||    
T  33802391 tttcccaccatgggaaagtaaatattgaccattaaataaaatagagaacatggttttatcatagacactca 33802321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 38687073 - 38687003
Alignment:
Q  107 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    |||||||| |||||||| | ||| |||| ||||||||||||||||||||||  ||||||||||||||||||    
T  38687073 tttcccacaatgggaaagtaaatattgatcattagataaagtagagaacatgattttatcatagacactca 38687003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 35943075 - 35943119
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatggg 120  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  35943075 aggtggggtttagcatgggaaagggaagttgtttcccaccatggg 35943119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 35840578 - 35840532
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  35840578 ggtggggtttagcatgggaaagggaagttgtttcccacgatgggaaa 35840532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 15183853 - 15183796
Alignment:
Q  120 gaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    |||| ||||||||||||||||||||||||||| |||||  |||||||| |||||||||    
T  15183853 gaaagttaattttgaccattagataaagtagaaaacatgattttatcacagacactca 15183796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 39258491 - 39258397
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    |||| |||||| |||||||| | ||||||||||||| |||      |||||||||| ||||||||||||| || |||||||||||||| | |||||||||    
T  39258491 ggtgaggtttactatgggaatgagaagttgtttcccgcca------aattaattttaaccattagataaactaaagaacatacttttaccgtagacactc 39258398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 27322635 - 27322572
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccatta 140  Q
    |||||||||||| |||||||| || ||||||||||||| |||||||| ||| | ||||||||||    
T  27322635 ggtggggtttaggatgggaaatgggagttgtttcccacgatgggaaagttattcttgaccatta 27322572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 37562295 - 37562361
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||||||||||| ||||||||||  | |||||||||||||| ||||| | |||||| ||||||||||    
T  37562295 ggtggggtttagcatgggaaaggagaattgtttcccaccataggaaagtcaattttaaccattagat 37562361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 12350114 - 12350159
Alignment:
Q  239 tttcttcctctcattcaaaccttatcagcccaggaaaattgatttt 284  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||    
T  12350114 tttcttcctctcattcaaaccttataagcttaggaaaattgatttt 12350159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 35839722 - 35839758
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttccca 113  Q
    |||||||||||| ||||||||||||||||||||||||    
T  35839722 ggtggggtttagcatgggaaagggaagttgtttccca 35839758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 122
Target Start/End: Original strand, 6012967 - 6013014
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaa 122  Q
    |||||||||||||| |||| ||| ||||||| ||||||||||||||||    
T  6012967 taggtggggtttagcatggaaaaaggaagttctttcccaccatgggaa 6013014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 77 - 112
Target Start/End: Original strand, 38660076 - 38660111
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttccc 112  Q
    |||| |||||||||||||||||||||||||||||||    
T  38660076 ggtgaggtttagtatgggaaagggaagttgtttccc 38660111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 33688222 - 33688259
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttccca 113  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  33688222 aggtggagtttagtatgggaaagggaagtagtttccca 33688259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 42346155 - 42346107
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||||||| ||||||| ||  |||||||||||| |||||||||    
T  42346155 taggtggggtttagcatgggaatggagagttgtttcccatcatgggaaa 42346107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 12907 - 12807
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    ||||| ||||| | |||| ||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12907 ggtggcgtttaatttggggaagtgaagttgtttcccaccatgggaaagttaattttgaccattagataaactagagaacatacttttatcatagacactc 12808  T
Q  177 a 177  Q
    |    
T  12807 a 12807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 77 - 254
Target Start/End: Original strand, 12184 - 12364
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    ||||| ||||| | |||||||| ||||||||||||||||||| ||||||||||||||||| |||||| || ||||||||||| |||||||||||||||||    
T  12184 ggtggcgtttaatttgggaaagagaagttgtttcccaccatgagaaaattaattttgaccgttagattaaatagagaacatatttttatcatagacactc 12283  T
Q  177 -acaccaga---nnnnnnnccacactcaccattcgacaacaacatgcgactgctgcttcaagtctctttcttcctctcattc 254  Q
     ||| ||||          |||||||||||| || |||||||||||| ||  || |||||| ||||||||||||||||||||    
T  12284 aacatcagattttttttttccacactcaccactcaacaacaacatgc-accactacttcaactctctttcttcctctcattc 12364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 4975696 - 4975796
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    ||||| |||||||||||||| |||||||||||||||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  4975696 ggtggcgtttagtatgggaatgggaagttgtttcccaccatggaaaagctaattttgaccattaaataaagtagagaacatacttttatcatagagactc 4975795  T
Q  177 a 177  Q
    |    
T  4975796 a 4975796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 4993604 - 4993704
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    ||||| |||||||||||||| |||||||||||| ||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  4993604 ggtggcgtttagtatgggaatgggaagttgttttccaccatggaaaagctaattttgaccattaaataaagtagagaacatacttttatcatagagactc 4993703  T
Q  177 a 177  Q
    |    
T  4993704 a 4993704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 4976554 - 4976453
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacact 175  Q
    ||||| ||||||||||||| | | ||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  4976554 aggtgaggtttagtatggggatgagaagttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacact 4976455  T
Q  176 ca 177  Q
    ||    
T  4976454 ca 4976453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 4994461 - 4994360
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacact 175  Q
    ||||| ||||||||||||| | | ||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  4994461 aggtgaggtttagtatggggatgagaagttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacact 4994362  T
Q  176 ca 177  Q
    ||    
T  4994361 ca 4994360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 83 - 174
Target Start/End: Complemental strand, 41519967 - 41519876
Alignment:
Q  83 gtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacac 174  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||  |||||||| ||| ||||||||||||||||||||||| |||||||||    
T  41519967 gtttagtatgggaaagggaagttttttcccaccatgggaaagttttttttgaccgttaaataaagtagagaacatacttttaccatagacac 41519876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 241 - 332
Target Start/End: Complemental strand, 41519841 - 41519748
Alignment:
Q  241 tcttcctctcattcaaaccttatcagcccaggaaaattgattttccaaaa--ccattcccttgtcatcgtcagttcaacttcaatggcaaaatt 332  Q
    |||||||||| |||||||||| ||||| ||| ||||||||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||    
T  41519841 tcttcctctccttcaaaccttgtcagcacagaaaaattgattttccaaaaaaccattcccttgtcaccgtcagttcaatttcaatggcaaaatt 41519748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 42369643 - 42369743
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    ||||||||||||||||| ||||| ||||||||||   |||||||||| | ||| ||  |||||||||||||||||||||||| |||||||||||||||||    
T  42369643 ggtggggtttagtatggaaaaggaaagttgtttcaatccatgggaaagtaaatattagccattagataaagtagagaacataattttatcatagacactc 42369742  T
Q  177 a 177  Q
    |    
T  42369743 a 42369743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 84 - 176
Target Start/End: Complemental strand, 42370991 - 42370899
Alignment:
Q  84 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    ||||||||||||| || ||||||||||||||||||||||| | ||| ||| |||||||||||||| ||||| ||| |||||||||||||||||    
T  42370991 tttagtatgggaatggaaagttgtttcccaccatgggaaagtaaatattggccattagataaagtggagaatatagttttatcatagacactc 42370899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 36390955 - 36391023
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| ||||||||||    
T  36390955 taggtggggtttagcatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattagat 36391023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 37545692 - 37545776
Alignment:
Q  93 ggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||  ||||| | | ||||||||||||||||    
T  37545692 ggaaagggaagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaacacattcttatcatagacactca 37545776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 34617652 - 34617724
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagt 148  Q
    ||||||||||||| ||||||||||  | |||||||||||||||||||| ||| ||||||||||||||| ||||    
T  34617652 aggtggggtttagcatgggaaaggataattgtttcccaccatgggaaagttatttttgaccattagattaagt 34617724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 8536171 - 8536237
Alignment:
Q  111 ccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||||||||| | ||| ||||| |||||||||||||||||||||  ||||||||||||||||||    
T  8536171 ccaccatgggaaagtaaatattgacgattagataaagtagagaacatgattttatcatagacactca 8536237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 8536904 - 8536834
Alignment:
Q  107 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||| ||||||| ||| | ||| |||||||||||||||||||||||||||  ||||||||||||||||||    
T  8536904 tttcctaccatggaaaagtaaatgttgaccattagataaagtagagaacatggttttatcatagacactca 8536834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 15602863 - 15602802
Alignment:
Q  82 ggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    ||||||| || |||||||||||||||||||||||||||||||||   |||||||||||||||    
T  15602863 ggtttagcataggaaagggaagttgtttcccaccatgggaaaatattttttgaccattagat 15602802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 24383112 - 24383064
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgttt-cccaccatgggaaa 123  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24383112 aggtggggtttagtatgggaaagggaagttgtttccccaccatgggaaa 24383064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 36391715 - 36391657
Alignment:
Q  82 ggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccatta 140  Q
    ||||||||||||||||||| |||||||| ||||||||||||| | |||||| |||||||    
T  36391715 ggtttagtatgggaaaggggagttgttttccaccatgggaaagtaaattttaaccatta 36391657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 173
Target Start/End: Complemental strand, 36719063 - 36718974
Alignment:
Q  84 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagaca 173  Q
    |||||||||||||||| || |||||||| ||||| |||||  ||||||| ||||||| || || ||   |||||||||||||||||||||    
T  36719063 tttagtatgggaaaggaaacttgtttcctaccataggaaagctaattttaaccattaaattaaataagaaacatacttttatcatagaca 36718974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 7868191 - 7868123
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||||||| ||||| ||| ||||||| |||||||||||||||||||||| | |||||| |||| |||||    
T  7868191 taggtgggatttagcatgagaaaggggagttgtttcccaccatgggaaagtaaattttaaccactagat 7868123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 41768768 - 41768712
Alignment:
Q  100 gaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaaca 156  Q
    |||||||||||||||||||||||| | ||||||||||||||||| | ||| ||||||    
T  41768768 gaagttgtttcccaccatgggaaagtcaattttgaccattagattaggtaaagaaca 41768712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 23876112 - 23876065
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||||||||||| |||||||| || ||||||||||||||||||||||    
T  23876112 aggtggggtttagcatgggaaatgggagttgtttcccaccatgggaaa 23876065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 37546599 - 37546540
Alignment:
Q  90 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagta 149  Q
    ||||||||||| |||||||||||| ||||||||| |||| |||||||| ||||| |||||    
T  37546599 atgggaaaggggagttgtttcccatcatgggaaagttaaatttgaccactagattaagta 37546540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 6085751 - 6085703
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||||||| ||||||||||  |||||||||| |||||||||||    
T  6085751 taggtggggtttagcatgggaaaggtgagttgtttcctaccatgggaaa 6085703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 38740438 - 38740489
Alignment:
Q  71 aatctaggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||||||||| ||||||| |||||||||| |||| |||||||||||||||||    
T  38740438 aatctaggtggcgtttagtctgggaaaggggagtt-tttcccaccatgggaaa 38740489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 41042572 - 41042644
Alignment:
Q  107 tttcccaccatgggaaaat-taattttgaccattagataaagtagagaacatacttttatcatagacactcac 178  Q
    ||||||||||||||||||| |  ||||||||||||||| || || ||| |||| | |||||||||||||||||    
T  41042572 tttcccaccatgggaaaatatttttttgaccattagatcaaatatagaccataatgttatcatagacactcac 41042644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 2307121 - 2307075
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||| ||||||| |||||||||||||||||||| |||||||| ||||    
T  2307121 ggtgaggtttagcatgggaaagggaagttgttttccaccatgagaaa 2307075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 23875245 - 23875333
Alignment:
Q  82 ggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatag 170  Q
    ||||||| ||||||||||| | ||||||| || ||||||||| ||  || |||||||||||| | |||  ||||||| | |||||||||    
T  23875245 ggtttagcatgggaaaggggaattgtttcgcatcatgggaaagttttttatgaccattagatcatgtaaggaacataatattatcatag 23875333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 30545469 - 30545417
Alignment:
Q  91 tgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||||||||||||||||||||||  |||||||| ||  |||| ||||||||||    
T  30545469 tgggaaagggaagttgtttcccatgatgggaaagttttttttaaccattagat 30545417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 44094865 - 44094825
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccat 117  Q
    |||||| ||||| |||||||||| |||||||||||||||||    
T  44094865 ggtgggatttagcatgggaaaggaaagttgtttcccaccat 44094825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 6e-31; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 91 - 254
Target Start/End: Original strand, 27763427 - 27763591
Alignment:
Q  91 tgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc-acaccaga-nnnn 188  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||| |||||| || ||||||||||| |||||||| |||||||| ||||||||         
T  27763427 tggggaagggaagttgtttcccaccaagggaaaactaattttgaccgttagattaaatagagaacatatttttatcaaagacactcaacaccagattttt 27763526  T
Q  189 nnnccacactcaccattcgacaacaacatgcgactgctgcttcaagtctctttcttcctctcattc 254  Q
       |||||||||||| || |||||||||||| || ||| |||||| ||||||||||||||||||||    
T  27763527 tttccacactcaccactcaacaacaacatgc-accgctacttcaactctctttcttcctctcattc 27763591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 25371169 - 25371235
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||||||   |||||||||||||||    
T  25371169 ggtggggtttagcatgggaaagtgaacttgtttcccaccatgggaaaatattttttgaccattagat 25371235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 8384066 - 8384018
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaat 125  Q
    |||||||||||| ||||||||| | |||||||||||||||||| |||||    
T  8384066 ggtggggtttagcatgggaaagtggagttgtttcccaccatggaaaaat 8384018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 16764925 - 16764968
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatggg 120  Q
    ||||| |||||| |||||||||| ||||||||||||||||||||    
T  16764925 ggtggagtttagcatgggaaaggaaagttgtttcccaccatggg 16764968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 168
Target Start/End: Original strand, 34034181 - 34034259
Alignment:
Q  90 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcat 168  Q
    ||||||||||  | ||| |||||||||||||||| ||| |||  |||||| ||| || ||||||||||| |||||||||    
T  34034181 atgggaaaggagaattgcttcccaccatgggaaagttattttaaaccattggatcaaatagagaacatagttttatcat 34034259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 10608369 - 10608288
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaatta-attttgaccattagataaagtagagaaca 156  Q
    |||||||||||| | |||||||||   ||| ||||||||||||||||| |||  ||||||||||||||| || ||| |||||    
T  10608369 aggtggggtttaatttgggaaaggctggttttttcccaccatgggaaagttagtttttgaccattagattaaatagggaaca 10608288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 29290123 - 29290184
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccat 138  Q
    |||||||||||| |||| || ||  |||||||||||||||||||||| ||||| || |||||    
T  29290123 ggtggggtttagcatggaaatggagagttgtttcccaccatgggaaagttaatgttaaccat 29290184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 4311236 - 4311192
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatggga 121  Q
    ||||| |||||||||||| ||| |||||| |||||||||||||||    
T  4311236 ggtggcgtttagtatgggtaagtgaagttttttcccaccatggga 4311192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 123
Target Start/End: Original strand, 24125986 - 24126018
Alignment:
Q  91 tgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||| ||||||||||||||||||||||    
T  24125986 tgggaaaggggagttgtttcccaccatgggaaa 24126018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 25067900 - 25067852
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||||||| ||||||||||  | |||||||||||||| |||||    
T  25067900 taggtggggtttagcatgggaaaggatatttgtttcccaccataggaaa 25067852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 164
Target Start/End: Complemental strand, 34035093 - 34035005
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatactttta 164  Q
    |||||| |||||  ||||||||||  | |||||||||| ||||||||| ||| |||  |||||| ||| || ||||||||||| |||||    
T  34035093 aggtggagtttaacatgggaaaggagaattgtttcccatcatgggaaagttattttaaaccattggatcaaatagagaacatagtttta 34035005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 46757428 - 46757524
Alignment:
Q  81 gggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    |||||||||||||||||| | |||||||| |||||||| |||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  46757428 gggtttagtatgggaaagaggagttgttttccaccatgagaaagtaaatattgaccattagataaagtagagaacataattttatcatagacactca 46757524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 12732247 - 12732347
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 176  Q
    |||||||||||| |||||||||||||   |||||||||||||||||| | ||| ||||||||||||| | ||| |||||||| ||||||||||||| |||    
T  12732247 ggtggggtttagcatgggaaagggaaagagtttcccaccatgggaaagtaaatattgaccattagatcatgtaaagaacatagttttatcatagactctc 12732346  T
Q  177 a 177  Q
    |    
T  12732347 a 12732347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 27599224 - 27599311
Alignment:
Q  90 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||||||| |||||||||||||||||||||| |||| |||||||||||||| |||||  ||||| | | ||||||||||||||||    
T  27599224 atgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaacacattcttatcatagacactca 27599311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 46759303 - 46759226
Alignment:
Q  84 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatactt 161  Q
    ||||||||||||||||| |||||||||||| ||| | |||  |||| |||||||||||||||||||||||||||||||    
T  46759303 tttagtatgggaaaggggagttgtttcccatcatagcaaagctaatcttgaccattagataaagtagagaacatactt 46759226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 24995851 - 24995918
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| |   |||||||||||||||    
T  24995851 aggtggggtttagaatgggaaaggggagttgtttcccaccatgggaaagtattttttgaccattagat 24995918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 27600130 - 27600043
Alignment:
Q  90 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 177  Q
    ||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||  ||||| | | ||||||||||| ||||    
T  27600130 atgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccactagattaagtaatgaacacattcttatcatagactctca 27600043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 32548721 - 32548643
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaac 155  Q
    ||||||||||||||||||||| |  | |||||||||||||||||||| ||||| ||  ||||||||| |||||||||||    
T  32548721 ggtggggtttagtatgggaaatgatacttgtttcccaccatgggaaagttaatgttagccattagatcaagtagagaac 32548643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 6730206 - 6730162
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatggg 120  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  6730206 aggtggggtttagcatgggaaagggaagttgtttcccaccatggg 6730162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 42607079 - 42607147
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||||||||||||| ||||||||||| | |||||||||||||||||||| ||  ||||| |||||||||    
T  42607079 taggtggggtttagcatgggaaaggggaattgtttcccaccatgggaaagttgtttttgtccattagat 42607147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 35771307 - 35771261
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  35771307 ggtggggtttagtatgggaaagcaaagttgtttcccaccatgggaaa 35771261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 170
Target Start/End: Complemental strand, 32871188 - 32871095
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatag 170  Q
    |||||||||||| ||||||| ||| |||||||||||||||| ||||| ||  ||| ||||||| ||| | ||| |||||||| | |||||||||    
T  32871188 ggtggggtttagcatgggaatggggagttgtttcccaccataggaaagtttttttggaccatttgatcatgtaaagaacataatattatcatag 32871095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 24996725 - 24996665
Alignment:
Q  83 gtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||||| ||||||||||| |||||||||||||||||||||| |   |||||||||||||||    
T  24996725 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtattttttgaccattagat 24996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 29060788 - 29060741
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||||||||||| ||||||||||| | ||||||||||||||||||||    
T  29060788 aggtggggtttagcatgggaaaggggaattgtttcccaccatgggaaa 29060741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 5064694 - 5064647
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||||||||||| ||||||| |||||||| ||||||| |||||||||    
T  5064694 aggtggggtttagcatgggaatgggaagttctttcccatcatgggaaa 5064647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 119
Target Start/End: Original strand, 9122657 - 9122692
Alignment:
Q  84 tttagtatgggaaagggaagttgtttcccaccatgg 119  Q
    ||||| ||||||||||||||||||||||||||||||    
T  9122657 tttagcatgggaaagggaagttgtttcccaccatgg 9122692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 30915759 - 30915826
Alignment:
Q  102 agttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcata 169  Q
    |||||||||||||||||||||| | ||||||  ||||||||| || |  ||| |||||||||||||||    
T  30915759 agttgtttcccaccatgggaaagtaaattttacccattagatcaaatgaagaccatacttttatcata 30915826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 40320459 - 40320416
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgg 119  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||    
T  40320459 aggtggggtttagcatgggaaaggagagttgtttcccaccatgg 40320416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 14629819 - 14629865
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    ||||| ||||||||||||||||||||||| ||| ||| |||||||||    
T  14629819 ggtggagtttagtatgggaaagggaagttcttttccatcatgggaaa 14629865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 36844612 - 36844658
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||||| ||||||||||  ||||||||||||||||| ||||    
T  36844612 ggtggggtttagcatgggaaaggtgagttgtttcccaccatgagaaa 36844658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 40257580 - 40257646
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    ||||||||||||||||||||| |  |||||||| | ||||||| ||| ||| ||||| |||||||||    
T  40257580 ggtggggtttagtatgggaaatgagagttgttttcgaccatggaaaagttatttttgtccattagat 40257646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 40319606 - 40319652
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 123  Q
    |||||||||||||||||||| ||  |||| |||||||||||||||||    
T  40319606 ggtggggtttagtatgggaatggagagttatttcccaccatgggaaa 40319652  T

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Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 35770276 - 35770328
Alignment:
Q  79 tggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattt 131  Q
    |||||||||||||| |||||  || |||||||||||||||| ||| |||||||    
T  35770276 tggggtttagtatgagaaagtaaaattgtttcccaccatggtaaagttaattt 35770328  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 40257844 - 40257784
Alignment:
Q  83 gtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 143  Q
    |||||| |||||||| || ||||||||||||||||| |||| ||  ||||| |||||||||    
T  40257844 gtttagcatgggaaatgggagttgtttcccaccatgagaaagttgtttttgtccattagat 40257784  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 171
Target Start/End: Complemental strand, 40258784 - 40258688
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcataga 171  Q
    ||||||| |||||| |||||||| |  | ||||||| |||||||||||| |  |||| |||||||| || || || | |||||| ||||||||||||    
T  40258784 taggtggagtttagcatgggaaatgataattgtttctcaccatgggaaagtagatttagaccattaaattaattaaataacatatttttatcataga 40258688  T

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Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 42607862 - 42607798
Alignment:
Q  75 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccatt 139  Q
    |||||||||||||| |||| |||||| | |||||||||| ||| ||||| ||| ||||| |||||    
T  42607862 taggtggggtttagcatggaaaaggggaattgtttcccatcataggaaagttatttttgtccatt 42607798  T

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Target: scaffold0071 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 170
Target Start/End: Complemental strand, 11952 - 11873
Alignment:
Q  90 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatag 170  Q
    |||||||||||||   |||||| ||||||||||| ||||| ||||||||||||| |||||||||||||| |||||||||||    
T  11952 atgggaaagggaaagagtttcc-accatgggaaagttaatcttgaccattagattaagtagagaacatatttttatcatag 11873  T

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Target: scaffold2003 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold2003
Description:

Target: scaffold2003; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 170
Target Start/End: Complemental strand, 580 - 486
Alignment:
Q  76 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatag 170  Q
    ||||||| || || ||||||||||| |||||||||||||||||| ||| | |||||| |||| ||||| || || ||| || |||||||||||||    
T  580 aggtgggattaagcatgggaaaggggagttgtttcccaccatggaaaagtaaattttaaccactagatcaaataaagagcacacttttatcatag 486  T

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Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 43266 - 43203
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccatta 140  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||| | ||| || |||||||    
T  43266 ggtggggtttagtatggaaaaggggagttgtttcccatcatgggaaagtaaatcttaaccatta 43203  T

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Target: scaffold0150 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 119
Target Start/End: Original strand, 14012 - 14054
Alignment:
Q  77 ggtggggtttagtatgggaaagggaagttgtttcccaccatgg 119  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||    
T  14012 ggtgggatttagcatgggaaaggggagttgtttcccaccatgg 14054  T

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Target: scaffold0119 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 36664 - 36620
Alignment:
Q  101 aagttgtttcccaccatgggaaaattaattttgaccattagataa 145  Q
    |||||||||||||| ||||||||| ||||||||||  ||||||||    
T  36664 aagttgtttcccactatgggaaaactaattttgactgttagataa 36620  T

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Target: scaffold0051 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 15106 - 15058
Alignment:
Q  78 gtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaatt 126  Q
    |||| |||||| ||||||| | |||||| ||||||||||||||||||||    
T  15106 gtggagtttagcatgggaatgagaagttctttcccaccatgggaaaatt 15058  T

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