View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9783_high_32 (Length: 237)
Name: NF9783_high_32
Description: NF9783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9783_high_32 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 6488922 - 6488700
Alignment:
| Q |
1 |
caaggttacttaatggattattggtctgcatgagatcagacctcaacaaccatgtaccgaggtcaaccattggctcgaccgcggtagcatggaggacagc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6488922 |
caaggttacttaatggattattggtctgcatgagatcagacctcaacaaccatgtaccgaggtcaaccattggctcgaccgcggtagcatggaggacagc |
6488823 |
T |
|
| Q |
101 |
agttgatttgagaagttttttggttgggacgtgcgaaaagagtttttcgacgtcgtggaagtcgagattggcgtcgggagggaggatggttgttaccgat |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6488822 |
agttgatttgagaagttttttggttgggacgtgcgaaaagagtttttcgacgtcgtggaagtcgagattggcgtcgggagggaggatggttgttaccgat |
6488723 |
T |
|
| Q |
201 |
gatggcagtttttggtctaaaat |
223 |
Q |
| |
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||||||||||||||||||||||| |
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|
| T |
6488722 |
gatggcagtttttggtctaaaat |
6488700 |
T |
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