View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9783_high_6 (Length: 471)

Name: NF9783_high_6
Description: NF9783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9783_high_6
NF9783_high_6
[»] chr7 (30 HSPs)
chr7 (27-320)||(47984968-47985268)
chr7 (54-320)||(24525718-24525984)
chr7 (27-320)||(10329409-10329709)
chr7 (54-320)||(38414909-38415174)
chr7 (27-320)||(20091280-20091579)
chr7 (27-309)||(48983843-48984132)
chr7 (54-320)||(19691897-19692163)
chr7 (27-308)||(23551069-23551359)
chr7 (82-187)||(25010371-25010476)
chr7 (54-209)||(8239601-8239756)
chr7 (54-190)||(8171572-8171706)
chr7 (54-174)||(18776799-18776917)
chr7 (71-161)||(29077184-29077274)
chr7 (54-141)||(10955468-10955553)
chr7 (54-141)||(12596320-12596405)
chr7 (255-319)||(25010254-25010318)
chr7 (71-119)||(9021848-9021896)
chr7 (126-172)||(17800348-17800394)
chr7 (71-124)||(36891579-36891632)
chr7 (120-172)||(23859002-23859054)
chr7 (71-119)||(23859079-23859127)
chr7 (268-311)||(12596443-12596486)
chr7 (287-322)||(47115670-47115705)
chr7 (71-113)||(6765729-6765771)
chr7 (126-172)||(7398380-7398426)
chr7 (86-124)||(9014825-9014863)
chr7 (271-320)||(9939442-9939491)
chr7 (271-320)||(10027618-10027667)
chr7 (268-309)||(28749592-28749633)
chr7 (71-119)||(17800269-17800317)
[»] chr3 (38 HSPs)
chr3 (54-320)||(53506918-53507183)
chr3 (54-320)||(9878721-9878985)
chr3 (54-320)||(43207272-43207540)
chr3 (27-322)||(50939233-50939536)
chr3 (54-320)||(44708282-44708549)
chr3 (54-321)||(54407192-54407458)
chr3 (54-320)||(34290670-34290940)
chr3 (82-320)||(48156942-48157185)
chr3 (54-209)||(37168286-37168439)
chr3 (71-197)||(8073387-8073512)
chr3 (54-197)||(3953930-3954071)
chr3 (54-174)||(54619237-54619355)
chr3 (27-174)||(27078569-27078721)
chr3 (27-174)||(27084366-27084518)
chr3 (54-174)||(38681127-38681245)
chr3 (54-141)||(21582758-21582843)
chr3 (54-174)||(36716059-36716177)
chr3 (55-174)||(29620423-29620540)
chr3 (54-141)||(47467671-47467756)
chr3 (82-180)||(18372427-18372525)
chr3 (54-141)||(53149348-53149433)
chr3 (54-141)||(42098788-42098873)
chr3 (126-172)||(29598040-29598086)
chr3 (255-320)||(48720531-48720595)
chr3 (127-172)||(49393023-49393068)
chr3 (120-172)||(52374590-52374642)
chr3 (268-311)||(3954866-3954909)
chr3 (268-311)||(36716289-36716332)
chr3 (268-311)||(38681361-38681404)
chr3 (82-121)||(49393097-49393136)
chr3 (268-311)||(50258748-50258791)
chr3 (268-311)||(54619467-54619510)
chr3 (268-310)||(27078832-27078874)
chr3 (268-310)||(27084629-27084671)
chr3 (54-119)||(36605974-36606036)
chr3 (54-122)||(28689395-28689461)
chr3 (71-124)||(54574876-54574929)
chr3 (120-172)||(8420258-8420310)
[»] chr2 (32 HSPs)
chr2 (54-320)||(26715931-26716196)
chr2 (54-322)||(9045830-9046097)
chr2 (27-322)||(27506740-27507043)
chr2 (54-322)||(10762599-10762867)
chr2 (54-320)||(24410236-24410505)
chr2 (71-197)||(29939911-29940037)
chr2 (121-299)||(8327488-8327669)
chr2 (54-174)||(3155167-3155285)
chr2 (54-174)||(4505844-4505962)
chr2 (71-163)||(6964968-6965060)
chr2 (71-174)||(8907128-8907231)
chr2 (72-174)||(12337498-12337600)
chr2 (54-141)||(3952989-3953074)
chr2 (54-141)||(7162767-7162852)
chr2 (54-124)||(16097008-16097076)
chr2 (71-124)||(37182670-37182723)
chr2 (255-311)||(4505688-4505744)
chr2 (120-172)||(24035667-24035719)
chr2 (120-172)||(29694312-29694364)
chr2 (120-172)||(38400726-38400778)
chr2 (268-311)||(3155012-3155055)
chr2 (268-311)||(6964801-6964844)
chr2 (71-118)||(22727551-22727598)
chr2 (27-57)||(8327690-8327720)
chr2 (271-321)||(21190943-21190993)
chr2 (268-309)||(3952910-3952951)
chr2 (71-116)||(12134089-12134134)
chr2 (71-124)||(28425759-28425812)
chr2 (271-320)||(30175519-30175568)
chr2 (271-311)||(7162686-7162726)
chr2 (120-172)||(37182598-37182650)
chr2 (72-124)||(38400798-38400850)
[»] chr1 (41 HSPs)
chr1 (27-321)||(13913479-13913783)
chr1 (54-320)||(1366911-1367177)
chr1 (54-320)||(9173056-9173321)
chr1 (27-304)||(19955547-19955831)
chr1 (27-320)||(17168769-17169070)
chr1 (27-320)||(40501789-40502090)
chr1 (27-308)||(27559459-27559751)
chr1 (82-320)||(44895467-44895706)
chr1 (54-197)||(23185366-23185507)
chr1 (54-320)||(51607472-51607739)
chr1 (54-173)||(9181038-9181155)
chr1 (71-197)||(4971666-4971792)
chr1 (54-190)||(5316626-5316760)
chr1 (71-174)||(44655703-44655806)
chr1 (71-197)||(50881369-50881495)
chr1 (54-150)||(5027535-5027629)
chr1 (85-174)||(27906779-27906868)
chr1 (54-141)||(14146295-14146380)
chr1 (54-141)||(3406413-3406498)
chr1 (54-141)||(3440322-3440407)
chr1 (54-141)||(6771786-6771871)
chr1 (71-141)||(41697185-41697255)
chr1 (71-133)||(16140058-16140120)
chr1 (71-124)||(33170771-33170824)
chr1 (277-320)||(23181711-23181754)
chr1 (71-124)||(43235818-43235871)
chr1 (120-172)||(39134844-39134896)
chr1 (268-311)||(14146214-14146257)
chr1 (268-311)||(41697293-41697336)
chr1 (268-311)||(44655548-44655591)
chr1 (54-115)||(21740970-21741029)
chr1 (71-121)||(38853537-38853587)
chr1 (271-308)||(5027991-5028028)
chr1 (270-311)||(6771705-6771746)
chr1 (91-124)||(26803960-26803993)
chr1 (71-124)||(39134771-39134824)
chr1 (83-124)||(45758506-45758547)
chr1 (86-115)||(52127521-52127550)
chr1 (71-119)||(5533329-5533377)
chr1 (272-320)||(10912112-10912160)
chr1 (268-308)||(27906962-27907002)
[»] chr5 (34 HSPs)
chr5 (54-320)||(38869394-38869659)
chr5 (27-321)||(16198791-16199093)
chr5 (29-320)||(40389535-40389831)
chr5 (28-301)||(9364113-9364393)
chr5 (27-320)||(27923885-27924185)
chr5 (27-320)||(7670728-7671028)
chr5 (54-308)||(16799358-16799610)
chr5 (54-245)||(28822373-28822563)
chr5 (71-194)||(16592120-16592243)
chr5 (54-197)||(27078939-27079080)
chr5 (54-174)||(34756397-34756515)
chr5 (54-197)||(30854258-30854398)
chr5 (54-141)||(36187910-36187995)
chr5 (54-141)||(19523183-19523268)
chr5 (71-141)||(2274874-2274944)
chr5 (71-141)||(15480135-15480205)
chr5 (71-125)||(22986604-22986658)
chr5 (71-127)||(23284108-23284164)
chr5 (83-124)||(40794385-40794426)
chr5 (71-119)||(36868922-36868970)
chr5 (268-311)||(15480243-15480286)
chr5 (268-311)||(19523102-19523145)
chr5 (268-311)||(31881604-31881647)
chr5 (54-119)||(31194643-31194705)
chr5 (268-310)||(34756628-34756670)
chr5 (71-124)||(2530943-2530996)
chr5 (71-116)||(10543682-10543727)
chr5 (127-172)||(15639575-15639620)
chr5 (71-124)||(33037781-33037834)
chr5 (127-172)||(34425832-34425877)
chr5 (120-172)||(14318503-14318555)
chr5 (71-119)||(26718995-26719043)
chr5 (71-119)||(26988739-26988787)
chr5 (277-309)||(28822580-28822612)
[»] chr6 (27 HSPs)
chr6 (54-316)||(27788722-27788984)
chr6 (27-320)||(235224-235525)
chr6 (54-320)||(20711754-20712018)
chr6 (27-320)||(17353759-17354060)
chr6 (27-320)||(28075588-28075889)
chr6 (82-320)||(19986966-19987207)
chr6 (71-245)||(34397740-34397914)
chr6 (54-197)||(19737726-19737867)
chr6 (54-174)||(13727433-13727551)
chr6 (54-174)||(21479448-21479566)
chr6 (54-174)||(33774071-33774189)
chr6 (54-174)||(21280499-21280617)
chr6 (54-141)||(24711033-24711118)
chr6 (71-141)||(30832573-30832643)
chr6 (72-119)||(1155899-1155946)
chr6 (71-124)||(21183724-21183777)
chr6 (268-311)||(13727663-13727706)
chr6 (268-311)||(19741237-19741280)
chr6 (268-311)||(21280342-21280385)
chr6 (268-311)||(27314778-27314821)
chr6 (255-317)||(11081684-11081746)
chr6 (82-119)||(27994778-27994815)
chr6 (135-172)||(30121706-30121743)
chr6 (270-310)||(1156033-1156073)
chr6 (72-124)||(2477634-2477686)
chr6 (88-124)||(20611794-20611830)
chr6 (268-308)||(23070903-23070943)
[»] chr8 (35 HSPs)
chr8 (27-320)||(42600584-42600885)
chr8 (54-320)||(23798295-23798561)
chr8 (27-322)||(10917192-10917494)
chr8 (54-313)||(23606663-23606914)
chr8 (54-197)||(45475745-45475886)
chr8 (71-197)||(41879109-41879235)
chr8 (71-197)||(13534735-13534861)
chr8 (71-197)||(13624275-13624401)
chr8 (71-174)||(30883280-30883383)
chr8 (54-174)||(5860778-5860896)
chr8 (71-174)||(2952270-2952373)
chr8 (54-174)||(3048551-3048669)
chr8 (120-172)||(41677295-41677347)
chr8 (54-124)||(7944556-7944624)
chr8 (71-122)||(34789911-34789962)
chr8 (71-124)||(5942697-5942750)
chr8 (54-141)||(37430192-37430277)
chr8 (126-172)||(11290113-11290159)
chr8 (71-124)||(8102913-8102966)
chr8 (71-124)||(11290185-11290238)
chr8 (127-172)||(25561635-25561680)
chr8 (126-170)||(8102845-8102889)
chr8 (72-124)||(39332455-39332507)
chr8 (268-311)||(2952486-2952529)
chr8 (268-311)||(5861009-5861052)
chr8 (54-124)||(15078759-15078827)
chr8 (125-172)||(15167540-15167587)
chr8 (271-322)||(15270142-15270193)
chr8 (268-311)||(20003890-20003933)
chr8 (277-320)||(45472191-45472234)
chr8 (268-309)||(3048787-3048828)
chr8 (127-172)||(8646129-8646174)
chr8 (71-124)||(15167464-15167517)
chr8 (86-123)||(38009203-38009240)
chr8 (120-172)||(7944644-7944696)
[»] chr4 (49 HSPs)
chr4 (54-320)||(2790774-2791040)
chr4 (324-465)||(44932237-44932378)
chr4 (54-319)||(32128394-32128658)
chr4 (54-317)||(40089328-40089590)
chr4 (82-321)||(24969241-24969485)
chr4 (27-322)||(34027386-34027687)
chr4 (54-320)||(19498313-19498576)
chr4 (54-320)||(16844827-16845095)
chr4 (82-322)||(38352314-38352556)
chr4 (54-320)||(37777256-37777525)
chr4 (54-209)||(43455564-43455717)
chr4 (54-320)||(16882428-16882693)
chr4 (27-317)||(54083241-54083541)
chr4 (54-197)||(47128920-47129061)
chr4 (71-197)||(35465040-35465166)
chr4 (71-197)||(35779373-35779499)
chr4 (54-190)||(34768607-34768741)
chr4 (71-197)||(10978833-10978959)
chr4 (71-197)||(23509846-23509972)
chr4 (54-197)||(48209173-48209314)
chr4 (54-174)||(38209624-38209742)
chr4 (71-197)||(13460140-13460266)
chr4 (94-197)||(10428276-10428379)
chr4 (85-174)||(55255225-55255314)
chr4 (54-133)||(54780774-54780851)
chr4 (54-141)||(5128875-5128960)
chr4 (71-141)||(1105521-1105591)
chr4 (54-141)||(32915374-32915459)
chr4 (54-141)||(37514648-37514733)
chr4 (271-322)||(54779439-54779490)
chr4 (54-124)||(4167924-4167992)
chr4 (271-320)||(35780573-35780622)
chr4 (127-172)||(36178607-36178652)
chr4 (126-174)||(36118584-36118632)
chr4 (120-172)||(37746842-37746894)
chr4 (268-311)||(10431456-10431499)
chr4 (260-303)||(35463958-35464001)
chr4 (268-311)||(55255089-55255132)
chr4 (268-310)||(5128997-5129039)
chr4 (27-57)||(24969505-24969535)
chr4 (271-321)||(29690950-29691000)
chr4 (271-320)||(25887301-25887350)
chr4 (271-320)||(48694710-48694759)
chr4 (128-172)||(2135447-2135491)
chr4 (72-124)||(27112036-27112088)
chr4 (271-315)||(27596656-27596700)
chr4 (120-172)||(39329513-39329565)
chr4 (268-308)||(45560718-45560758)
chr4 (271-315)||(45996907-45996951)
[»] scaffold0039 (2 HSPs)
scaffold0039 (54-204)||(106459-106607)
scaffold0039 (255-321)||(106378-106444)
[»] scaffold0070 (2 HSPs)
scaffold0070 (71-197)||(1271-1397)
scaffold0070 (268-311)||(1020-1063)
[»] scaffold0001 (1 HSPs)
scaffold0001 (75-141)||(181903-181969)
[»] scaffold0027 (1 HSPs)
scaffold0027 (255-320)||(4149-4214)
[»] scaffold0007 (2 HSPs)
scaffold0007 (125-172)||(230986-231033)
scaffold0007 (71-119)||(230908-230956)
[»] scaffold0012 (1 HSPs)
scaffold0012 (71-124)||(206538-206591)
[»] scaffold1590 (1 HSPs)
scaffold1590 (71-118)||(307-354)
[»] scaffold0227 (1 HSPs)
scaffold0227 (71-124)||(16028-16081)
[»] scaffold1320 (1 HSPs)
scaffold1320 (54-124)||(1355-1423)
[»] scaffold0369 (1 HSPs)
scaffold0369 (271-321)||(14372-14422)
[»] scaffold0022 (2 HSPs)
scaffold0022 (126-172)||(40012-40058)
scaffold0022 (126-172)||(138072-138118)
[»] scaffold0018 (1 HSPs)
scaffold0018 (71-124)||(173559-173612)


Alignment Details
Target: chr7 (Bit Score: 160; Significance: 4e-85; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 27 - 320
Target Start/End: Original strand, 47984968 - 47985268
Alignment:
Q  27 aaaaagcaatgatctatttatatttttt--------aaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatga 118  Q
    ||||||||||| ||||||||||||||||        |||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||    
T  47984968 aaaaagcaatgttctatttatatttttttaaaagaaaaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatga 47985065  T
Q  119 gaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnt 218  Q
    | ||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||        |    
T  47985066 ggaacccccacctaacacaaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggctggggatattaaaaaaaat 47985165  T
Q  219 tgaagggcagtaatactagtgggtatt-nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggc 317  Q
    || ||||||||||||||||||||||||          |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47985166 tggagggcagtaatactagtgggtattaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccgggc 47985265  T
Q  318 ctg 320  Q
    |||    
T  47985266 ctg 47985268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 54 - 320
Target Start/End: Original strand, 24525718 - 24525984
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||||||||||||| ||||||  || ||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  24525718 taaatataaggtgccgtgtatat--gcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 24525815  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt--nnnnnn 251  Q
     ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||        ||| ||||||||| ||||||||||||||            
T  24525816 aattctaatatgcctaaaaggctaaaacaagggggcagaaaatggctgggggtattaaaaaaaattggagggcagtagtactagtgggtattaaaaaaaa 24525915  T
Q  252 nnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
       |||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  24525916 aattgaggcccatgactaagggaggcccagctctgttgagctgtttgcaccccctcagggctgggcctg 24525984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 27 - 320
Target Start/End: Original strand, 10329409 - 10329709
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||||||||| |||||||||||||||||||       ||||||||||||  ||||||||  | | ||||||||||||||||||||||||||||||||||    
T  10329409 aaaaagcaatgttctatttatattttttaaaagataaatataaggtgccg--tatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgag 10329506  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnntt 219  Q
    |||||||||| ||| ||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| ||||||||||||||||||        ||    
T  10329507 aaacccccacttaacaccaaaagcaagaggacctaattctaataggcgtaaaaggctaaaacaaggggacaaaaaatggctgggggtattaaaaaatatt 10329606  T
Q  220 gaagggcagtaatactagtgggtatt--nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggc 317  Q
    | ||||||||| ||||||||||||||           |||| ||||||||||||||||||| ||| ||||||| ||||||||||||||||||| ||||||    
T  10329607 ggagggcagtagtactagtgggtattaaaaaaaaaattgaggcccatgactgagggagacctagcgctgttgaactgtttgcaccccctcaggaccgggc 10329706  T
Q  318 ctg 320  Q
    |||    
T  10329707 ctg 10329709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 54 - 320
Target Start/End: Original strand, 38414909 - 38415174
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||| ||  ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  38414909 taaatataaggtgacg--tatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 38415006  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt-nnnnnnn 252  Q
     |||||||||||||||||||||||||||||||| | |||||||||||| |||||||        ||| |||||| |||||||||||||||||            
T  38415007 aattctaataggcctaaaagactaaaacaagggaatagaaaatggctgagggtattaaaaaaaattggagggcaataatactagtgggtattaaaaaaaa 38415106  T
Q  253 nntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
      |||| ||||||||| |||||| |||||||||||||||||||||||| |||||||| ||||||||||    
T  38415107 tttgaggcccatgactaagggaggcccagctctgttgagctgtttgcatcccctcagagccgggcctg 38415174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 27 - 320
Target Start/End: Original strand, 20091280 - 20091579
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||| |||||||||||||||||||||||||       ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20091280 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 20091377  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnt 218  Q
     ||||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||||||| ||| ||||||| ||||||||||         |    
T  20091378 gaacccccacctaacaccaaaagtaagaggacctaattctaataggcctaaaaggctaaaacaagggtacataaaatggttgggggtattaaaaaaaaat 20091477  T
Q  219 tgaagggcagtaatactagtgggtatt-nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggc 317  Q
    || ||||||||| |||| |||||||||          |||| |||||||||||||||| ||||||||| ||||||||||||||||||| ||||| |||||    
T  20091478 tggagggcagtagtactggtgggtattaaaaaaaaattgaggcccatgactgagggaggcccagctctattgagctgtttgcaccccc-cagggacgggc 20091576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 27 - 309
Target Start/End: Original strand, 48983843 - 48984132
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||| |||||||||||||||||||||||||       ||||||||| ||  ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  48983843 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaataactaccgtatacatgag 48983940  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnt 218  Q
     ||||||||||||| |||||||| |||||||| | ||||||||||||||||||| |||||||||||| ||| ||||||| ||||||||||         |    
T  48983941 gaacccccacctaacaccaaaagtaagaggacttaattctaataggcctaaaaggctaaaacaagggtacaaaaaatggttgggggtattaaaaaaaaat 48984040  T
Q  219 tgaagggcagtaatactagtgggtatt-nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcag 309  Q
    || ||||||||| ||||||||||||||          |||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  48984041 tggagggcagtagtactagtgggtattaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcag 48984132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 54 - 320
Target Start/End: Complemental strand, 19692163 - 19691897
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||||||||||||   ||||||||| ||||||| ||||||||||||||||  |||||||||||| ||||| | ||||| |||||||||||||||||||    
T  19692163 taaatataaggtgcca--tatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgaggaaccctcgcctaacaccaaaagcaagaggacct 19692066  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt-nnnnnnn 252  Q
     |||||||||||||||||||||||||||||||||||||||||||| ||||||||||         || ||| ||||||||||||| ||||||            
T  19692065 aattctaataggcctaaaagactaaaacaaggggacagaaaatggttgggggtattaaaaaaaaatggaggacagtaatactagttggtattaaaaaaaa 19691966  T
Q  253 nntgagaccca-tgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
      |||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  19691965 attgaggcccattgactgagggaggcccagctctgttgagctgtttgcaccccctcagggtcgggcctg 19691897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 27 - 308
Target Start/End: Original strand, 23551069 - 23551359
Alignment:
Q  27 aaaaagcaatgatctatttatatttttt--------aaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatga 118  Q
    ||||||||||||||||||||||||||||        |||||||||||| ||  ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  23551069 aaaaagcaatgatctatttatatttttttaaaagataaatataaggtgtcg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatacatga 23551166  T
Q  119 gaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnt 218  Q
    | ||||||||||||| ||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||| ||||||||        |    
T  23551167 ggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaagctaaaacaaggggacaaaaaatggctaggggtattaaatttttt 23551266  T
Q  219 t-gaagggcagtaatactagtgggtattnnnnnnnnn--tgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctca 308  Q
    | | ||||||||| ||||||||||||||           |||| ||||||| ||||||||  ||| |||| ||||||||||||||||||||||    
T  23551267 ttggagggcagtagtactagtgggtattaaaaaaaaaattgaggcccatgattgagggaggtccaactctattgagctgtttgcaccccctca 23551359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 25010476 - 25010371
Alignment:
Q  82 gtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaac 181  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  25010476 gtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaac 25010377  T
Q  182 aagggg 187  Q
    ||||||    
T  25010376 aagggg 25010371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 8239756 - 8239601
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccc--cacctaataccaaaagcaagaggac 151  Q
    ||||||||| ||||||  ||||||||  ||||||||||| |||||||||| ||||||||| ||||| ||||||  ||| ||| |||||||||||||||||    
T  8239756 taaatataatgtgccg--tatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacccctccacttaacaccaaaagcaagaggac 8239659  T
Q  152 ctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt 209  Q
    || ||||||||||||||||||| ||||||||||||||||  |||||| ||||||||||    
T  8239658 ctaattctaataggcctaaaaggctaaaacaaggggacaacaaatggttgggggtatt 8239601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 54 - 190
Target Start/End: Original strand, 8171572 - 8171706
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||    
T  8171572 taaatacaaggtgccg--tatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 8171669  T
Q  154 gattctaataggcctaaaagactaaaacaaggggaca 190  Q
     |||||||||  |||||||| |||||||||| |||||    
T  8171670 aattctaataatcctaaaaggctaaaacaagaggaca 8171706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 18776799 - 18776917
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||    
T  18776799 taaatacaaggtgccg--tatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaacccccacctaacaccaaaaacaagaggaact 18776896  T
Q  154 gattctaataggcctaaaaga 174  Q
     |||||||||  |||||||||    
T  18776897 aattctaataatcctaaaaga 18776917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 29077274 - 29077184
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaa 161  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| || |||||||    
T  29077274 gtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaa 29077184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 10955553 - 10955468
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    ||||||||||||||||  ||||||||| |||||| || |||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  10955553 taaatataaggtgccg--tatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 10955468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 12596320 - 12596405
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  ||||||||  ||||||||| ||||||||||||||||||||| |||||| ||||||||||||| |||||||    
T  12596320 taaatacaaggtgccg--tatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaacaccaaaa 12596405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 25010318 - 25010254
Alignment:
Q  255 tgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcct 319  Q
    |||| |||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||    
T  25010318 tgaggcccatgactgagggaggcccaactctgttgagctgtttgtaccccctcagggccgggcct 25010254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 9021848 - 9021896
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||    
T  9021848 gtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgag 9021896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 17800348 - 17800394
Alignment:
Q  126 ccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||    
T  17800348 ccacctaacaccaaaagcaagaggacccaattctaataggcctaaaa 17800394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 36891632 - 36891579
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||| | ||||| |||||||||||||| ||||||||||||||||| ||||    
T  36891632 gtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacc 36891579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 23859054 - 23859002
Alignment:
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||| ||||||||| |||||| |||||||||||  ||||||||||||||||||    
T  23859054 aaacacccacctaacaccaaatgcaagaggacccaattctaataggcctaaaa 23859002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 23859127 - 23859079
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||||||||  ||||||||||| ||||||| |||||||||||||||||    
T  23859127 gtatatatgcgatacacccaaagatgaaaattactaccgtatacatgag 23859079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 12596443 - 12596486
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  12596443 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 12596486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 322
Target Start/End: Complemental strand, 47115705 - 47115670
Alignment:
Q  287 ttgagctgtttgcaccccctcagggccgggcctggt 322  Q
    |||||||||||||||||||| |||||||||||||||    
T  47115705 ttgagctgtttgcaccccctaagggccgggcctggt 47115670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 6765729 - 6765771
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtata 113  Q
    ||||||| |||||||| |||||||||||||| |||||||||||    
T  6765729 gtatataagccgtacatccaaaggtgaaaatcactaccgtata 6765771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 7398426 - 7398380
Alignment:
Q  126 ccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||| ||| ||||||||||||||||||  ||||||||||||||||||    
T  7398426 ccacgtaacaccaaaagcaagaggacccaattctaataggcctaaaa 7398380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 9014825 - 9014863
Alignment:
Q  86 acccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  9014825 acccaaaggtgaaaatcactaccgtatacatgagtaacc 9014863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 9939442 - 9939491
Alignment:
Q  271 gggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
    ||||| ||||||||||| |||||||||||||| || ||||||||| ||||    
T  9939442 gggaggcccagctctgtagagctgtttgcacctccccagggccggccctg 9939491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 10027667 - 10027618
Alignment:
Q  271 gggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
    ||||| ||||||||||| |||||||||||||| || ||||||||| ||||    
T  10027667 gggaggcccagctctgtagagctgtttgcacctccccagggccggccctg 10027618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 28749633 - 28749592
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcag 309  Q
    |||||||| ||||||||  |||||||||||||||||||||||    
T  28749633 tgagggaggcccagctcgtttgagctgtttgcaccccctcag 28749592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 17800269 - 17800317
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    |||||||||  ||||||||||| |||||||| |||||||||| ||||||    
T  17800269 gtatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatgag 17800317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 154; Significance: 2e-81; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 54 - 320
Target Start/End: Original strand, 53506918 - 53507183
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  53506918 taaatataaggtaccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaacaccaaaagcaagaggacct 53507015  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt-nnnnnnn 252  Q
     ||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||        ||| ||||||||| ||||||||||||||            
T  53507016 aattctaataggcctaaaaggctaaaacaaggggacataaaatggttgggggtattaaaaaaaattggagggcagtagtactagtgggtattaaaaaaaa 53507115  T
Q  253 nntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
      |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  53507116 attgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccgggcctg 53507183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 54 - 320
Target Start/End: Original strand, 9878721 - 9878985
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||||||||||| |  ||||||||| ||||||||||||||||||||||||| ||||||||| || |||||||| ||||  ||||||||||||||||||    
T  9878721 taaatataaggtgcag--tatatatgcggtacacccaaaggtgaaaatgactatcgtatacataaggaacccccatctaacgccaaaagcaagaggacct 9878818  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtattnnnnnnnn 253  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||| ||||||||||||||||||||||||            
T  9878819 aattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattaaaaaaaattggagggcagtaatactagtgggtattaaaaaaaa 9878918  T
Q  254 ntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
     |||| ||||||| | |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  9878919 ttgaggcccatgattaagggaggcccagctctgttgagctgtttgcaccccctcagggccggacctg 9878985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 54 - 320
Target Start/End: Original strand, 43207272 - 43207540
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| ||||| | |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  43207272 taaatataaggtgccg--tatatatgcggtacatc-aaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 43207368  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt---nnnnnnnnttgaagggcagtaatactagtgggtatt--nnn 248  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||| ||||||||||||||||||||||||         
T  43207369 aattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattaaaaaaaaaaattggagggcagtaatactagtgggtattaaaaa 43207468  T
Q  249 nnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
          |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  43207469 aaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcaggaccgggcctg 43207540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 27 - 322
Target Start/End: Original strand, 50939233 - 50939536
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||  ||||||||  |||||||||||||| |||||||||||||||||||||||    
T  50939233 aaaaagcaatgatctatttatattttttaaaagataaatataaggtgccgtatatatatg--gtacacccaaaggtaaaaatgactaccgtatacatgag 50939330  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt--nnnnnnnn 217  Q
     ||||||| ||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||              
T  50939331 gaacccccgcctaacaccaaaagcaaaaggacctaattctaataggcctaaaagactaaaacaaggagacagaaaatggctggggttattaaaaaaaaaa 50939430  T
Q  218 ttgaagggcagtaatactagtgggtatt-nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccggg 316  Q
    ||| ||||||||| |||| |||||||||          |||| |||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  50939431 ttggagggcagtagtactggtgggtattaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacctcctcagggacggg 50939530  T
Q  317 cctggt 322  Q
    ||||||    
T  50939531 cctggt 50939536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 54 - 320
Target Start/End: Complemental strand, 44708549 - 44708282
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  44708549 taaatataaggtgccg--tatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagatgacct 44708452  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttgaagggcagtaatactagtgggtatt--nnnnn 250  Q
     ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||         ||| || |||||| ||||||||| ||||           
T  44708451 aattctaataggcctaaaaggctaaaacaaggggacataaaatggctgggggtattaaaaaaaaattggagagcagtagtactagtggatattaaaaaaa 44708352  T
Q  251 nnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
        |||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  44708351 aaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagagccgggcctg 44708282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 54 - 321
Target Start/End: Original strand, 54407192 - 54407458
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||    
T  54407192 taaatataaggtgccg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatacat-agtaacccccacctaacaccaaaagcaagaggacct 54407288  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttgaagggcagtaatactagtgggtatt-nnnnnn 251  Q
     ||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||         ||| ||||||||| ||||||| ||||||           
T  54407289 aattctaataggcctaaaaggctaaaagaaggggacagaaaatagctgggggtattaaaaaaaaattggagggcagtagtactagtaggtattaaaaaaa 54407388  T
Q  252 nnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctgg 321  Q
       |||| |||||||||||||||| |||| ||||||||||||||||||||| ||||||| ||||| ||||    
T  54407389 aattgaggcccatgactgagggaggcccaactctgttgagctgtttgcacctcctcaggaccgggtctgg 54407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 54 - 320
Target Start/End: Original strand, 34290670 - 34290940
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||||||||    
T  34290670 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacctaacaccaaaaacaagaggacct 34290767  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt---nnnnnnnnttgaagggcagtaatactagtgggtatt---nn 247  Q
     ||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||           ||| ||||||||| ||||||||| ||||         
T  34290768 aattctaataggcctaaaaggctaaaacaaggggacataaaatggttgggggtattaaaaaaaaaaattggagggcagtagtactagtggatattaaaaa 34290867  T
Q  248 nnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
           |||| |||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||||    
T  34290868 aaaaaattgaggcccatgcctgagggaggcccaactctgttgagctgtttgcaccccctcagggtcgggcctg 34290940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 82 - 320
Target Start/End: Complemental strand, 48157185 - 48156942
Alignment:
Q  82 gtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaac 181  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||| ||| | ||||||||||||||| | |||||| ||||| |||||| |||||||    
T  48157185 gtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacttaacatcaaaagcaagaggacgtaattctagtaggcttaaaaggctaaaac 48157086  T
Q  182 aaggggacagaaaatggctgggggtatt--nnnnnnnnttgaagggcagtaatactagtgggtatt---nnnnnnnnntgagacccatgactgagggaga 276  Q
    ||||||||||||||||||||||||||||          ||| |||||| |||||||||||||||||            | || ||||||| ||||||||     
T  48157085 aaggggacagaaaatggctgggggtattaaaaaaaaaattggagggcattaatactagtgggtattaaaaaataaaatttaggcccatgattgagggagg 48156986  T
Q  277 cccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  48156985 cccagctctgttgagctgtttgcaccccctcagggccgggcctg 48156942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 37168439 - 37168286
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||  ||| |||||||||||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||    
T  37168439 taaatataaggtgccg--tatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacactaaaagcaagaggacct 37168342  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt 209  Q
     ||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  37168341 aattataataggcctaaaaggctaaaacaaggggacataaaatagctgggggtatt 37168286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 8073387 - 8073512
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| || |||||| ||| ||||||||||| |||| || ||||||||||||||||    
T  8073387 gtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaa-ccccacataacaccaaaagcaataggaactaattctaataggcctaa 8073485  T
Q  171 aagactaaaacaaggggacagaaaatg 197  Q
    ||| |||||||||| ||||| ||||||    
T  8073486 aaggctaaaacaagaggacataaaatg 8073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 3953930 - 3954071
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| ||||||||||||  |||||||||||||| ||||||||||||| ||||||| |||||||| ||    
T  3953930 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 3954027  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatg 197  Q
     |||||||||  |||||||| |||||||||| | ||||||||||    
T  3954028 aattctaataatcctaaaaggctaaaacaagagaacagaaaatg 3954071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 54619237 - 54619355
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||    
T  54619237 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 54619334  T
Q  154 gattctaataggcctaaaaga 174  Q
     |||||||||  |||||||||    
T  54619335 aattctaataatcctaaaaga 54619355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 27078569 - 27078721
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||||||||| |||||||||||||||||||       || || ||||||  ||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  27078569 aaaaagcaatgttctatttatattttttaaaagataaatacaaagtgccg--tatatatgcggtatacccagaggtgaaaatgactaccgtatacatgag 27078666  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaaga 174  Q
    ||||||| |||||| ||||||| ||||| || || |||||||||  |||||||||    
T  27078667 aaacccctacctaacaccaaaatcaagatgaactaattctaataatcctaaaaga 27078721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 27084366 - 27084518
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||||||||| |||||||||||||||||||       || || ||||||  ||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  27084366 aaaaagcaatgttctatttatattttttaaaagataaatacaaagtgccg--tatatatgcggtatacccagaggtgaaaatgactaccgtatacatgag 27084463  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaaga 174  Q
    ||||||| |||||| ||||||| ||||| || || |||||||||  |||||||||    
T  27084464 aaacccctacctaacaccaaaatcaagatgaactaattctaataatcctaaaaga 27084518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 38681127 - 38681245
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||| ||||| ||||| ||| |||||||||||||||||||||||||||| || |||||||||| ||||||| |||||||| ||    
T  38681127 taaatacaaggtgccg--tatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaaaccccacctaacaccaaaatcaagaggaact 38681224  T
Q  154 gattctaataggcctaaaaga 174  Q
     |||||||||  |||||||||    
T  38681225 aattctaataatcctaaaaga 38681245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 21582843 - 21582758
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  21582843 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 21582758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 36716059 - 36716177
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| ||||||||| ||| ||||||||| ||||  |||||||||||| ||||||| |||||||| ||    
T  36716059 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagggacccccacctaacaccaaaatcaagaggaact 36716156  T
Q  154 gattctaataggcctaaaaga 174  Q
     |||||||||  |||||||||    
T  36716157 aattctaataatcctaaaaga 36716177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 29620423 - 29620540
Alignment:
Q  55 aaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctg 154  Q
    ||||| |||||||||  ||||||||| ||| | ||| |||||||||||||||||||||||||||| ||||||||||||| |||| || |||||||| ||     
T  29620423 aaatacaaggtgccg--tatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccacaatcaagaggaacta 29620520  T
Q  155 attctaataggcctaaaaga 174  Q
    ||| |||||  |||||||||    
T  29620521 attttaataatcctaaaaga 29620540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 47467756 - 47467671
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  |||||||||  |||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  47467756 taaatacaaggtgccg--tatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 47467671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 18372525 - 18372427
Alignment:
Q  82 gtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaa 180  Q
    |||||| || |||||||||||||||||||||||||||| || ||||| |||| ||||||| |||||||| || |||||||||  |||||||| ||||||    
T  18372525 gtacacacagaggtgaaaatgactaccgtatacatgaggaatccccatctaacaccaaaatcaagaggaactaattctaataatcctaaaaggctaaaa 18372427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 53149348 - 53149433
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  ||||||||| |||||| || || | ||||||||||||||||||||||| ||||||||||||| |||||||    
T  53149348 taaatacaaggtgccg--tatatatgcggtacactcagagataaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 53149433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 42098873 - 42098788
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  ||||||||| ||| || || |||||||||||||||||||||||||||| |||||| || ||| |||||||    
T  42098873 taaatacaaggtgccg--tatatatgcggtatactcagaggtgaaaatgactaccgtatacatgaggaacccctacttaacaccaaaa 42098788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 29598086 - 29598040
Alignment:
Q  126 ccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  29598086 ccacctaacaccaaaagcaagatgacctaattctaataggcctaaaa 29598040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 255 - 320
Target Start/End: Original strand, 48720531 - 48720595
Alignment:
Q  255 tgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
    |||| |||||||||||||||  | |||||||||||||||||||||| ||| ||||||||| |||||    
T  48720531 tgaggcccatgactgagggaagctcagctctgttgagctgtttgca-cccgtcagggccgtgcctg 48720595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 49393068 - 49393023
Alignment:
Q  127 cacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||    
T  49393068 cacctaacaccaaaagtaagaggacctaattctaataggcctaaaa 49393023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 52374642 - 52374590
Alignment:
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||| ||||||||| |||||||||||||||||   ||||||||||||||||||    
T  52374642 aaacacccacctaacaccaaaagcaagaggactcaattctaataggcctaaaa 52374590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 3954866 - 3954909
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  3954866 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 3954909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 36716289 - 36716332
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  36716289 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 36716332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 38681361 - 38681404
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  38681361 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 38681404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 121
Target Start/End: Complemental strand, 49393136 - 49393097
Alignment:
Q  82 gtacacccaaaggtgaaaatgactaccgtatacatgagaa 121  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  49393136 gtacacccaaaggtaaaaattactaccgtatacatgagaa 49393097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 50258748 - 50258791
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  50258748 tgagggaggcccagctcatttgagctgtttgcaccccctcaggg 50258791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 54619467 - 54619510
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  54619467 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 54619510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 27078832 - 27078874
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcagg 310  Q
    |||||||| ||||||||  ||||||||||||||||||||||||    
T  27078832 tgagggaggcccagctcgtttgagctgtttgcaccccctcagg 27078874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 27084629 - 27084671
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcagg 310  Q
    |||||||| ||||||||  ||||||||||||||||||||||||    
T  27084629 tgagggaggcccagctcgtttgagctgtttgcaccccctcagg 27084671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 36606036 - 36605974
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    |||||| |||||||||  ||||||||| ||||||||| || ||||||| |||||||||||||||||    
T  36606036 taaatacaaggtgccg--tatatatgcggtacacccagagatgaaaat-actaccgtatacatgag 36605974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 28689395 - 28689461
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaa 122  Q
    |||||| |||||||||  |||||||||  || | |||||||||||||| ||| ||||||||||||||||    
T  28689395 taaatacaaggtgccg--tatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgagaaa 28689461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 54574876 - 54574929
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||| ||||||||||| || ||||| |||||| |||||||||| ||||    
T  54574876 gtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgaggaacc 54574929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 8420310 - 8420258
Alignment:
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||| ||||||||| |||||||||||||| |||  ||||||||| ||||||||    
T  8420310 aaacacccacctaacaccaaaagcaagagaacccaattctaatatgcctaaaa 8420258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 154; Significance: 2e-81; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 54 - 320
Target Start/End: Complemental strand, 26716196 - 26715931
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| ||||    
T  26716196 taaatataaggtgcca--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacaaaaagcaagagaacct 26716099  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt-nnnnnnn 252  Q
     ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||        ||||||||||||||||||||||||||||            
T  26716098 aattctaataggtctaaaagactaaaacaaggggacataaaatggctgggggtattaaaaaaaattgaagggcagtaatactagtgggtattaaaaaaaa 26715999  T
Q  253 nntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
      |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26715998 attgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccgggcctg 26715931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 54 - 322
Target Start/End: Complemental strand, 9046097 - 9045830
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||    
T  9046097 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacaaaaagcaagaggacct 9046000  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt-nnnnnnn 252  Q
     ||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||        ||| ||||||||||||||| ||||||||            
T  9045999 aattctaataagcctaaaagactaaaacaaggggacataaaatagctgggggtattaaaaaaaattggagggcagtaatactaatgggtattaaaaaaaa 9045900  T
Q  253 nntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctggt 322  Q
      |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  9045899 attgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcaggaccgggcctggt 9045830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 27 - 322
Target Start/End: Original strand, 27506740 - 27507043
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||  ||||||||  |||||||||||||| ||||||||||| |||||||||||    
T  27506740 aaaaagcaatgatctatttatattttttaaaagataaatataaggtgccg--tatatatgtggtacacccaaaggtaaaaatgactactgtatacatgag 27506837  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnt 218  Q
     ||| ||||||||| ||||||||||||| ||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||         |    
T  27506838 gaactcccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggagacagaaaatggctgggggtattaaattttttt 27506937  T
Q  219 tgaagggcagtaatactagtgggtatt--nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccggg 316  Q
    || ||||||||| ||||| ||||||||           |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  27506938 tggagggcagtagtactaatgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacggg 27507037  T
Q  317 cctggt 322  Q
    ||||||    
T  27507038 cctggt 27507043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 54 - 322
Target Start/End: Original strand, 10762599 - 10762867
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  10762599 taaatataaggtgc--ggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaatgcaagaggacct 10762696  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt--nnnnnn 251  Q
     ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||        ||| ||| ||||| ||| ||||||||||            
T  10762697 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgagggtattaaaaacaattggaggacagtagtaccagtgggtattaaaaaaaa 10762796  T
Q  252 nnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctggt 322  Q
       |||| ||||||| |||||||  |||||||||||||||||||||||| |||||||||||||| ||||||    
T  10762797 aattgaggcccatgattgagggaagcccagctctgttgagctgtttgcatcccctcagggccggccctggt 10762867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 54 - 320
Target Start/End: Complemental strand, 24410505 - 24410236
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatga-gaaacccccacctaataccaaaagcaagaggacc 152  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||    
T  24410505 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccccccacctaacaccaaaaacaagaggacc 24410408  T
Q  153 tgattctaataggcctaaaagactaaaacaa-ggggacagaaaatggctgggggtatt--nnnnnnnnttgaagggcagtaatactagtgggtatt-nnn 248  Q
    | |||||||| |||||||||| ||||||||| ||||||||||||| ||||||||||||          ||| |||| |||| ||||| ||||||||        
T  24410407 taattctaattggcctaaaaggctaaaacaagggggacagaaaatagctgggggtattaaaaaaaaaattggagggtagtagtactaatgggtattaaaa 24410308  T
Q  249 nnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
          |||| |||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||    
T  24410307 aaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccccttagggacgggcctg 24410236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 29939911 - 29940037
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||| || |||||||||| |||||    
T  29939911 gtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccaccacctaacaccaaaagcaagaggaactaattctaatagacctaa 29940010  T
Q  171 aagactaaaacaaggggacagaaaatg 197  Q
    |||  ||||||||| ||||||||||||    
T  29940011 aaggttaaaacaagaggacagaaaatg 29940037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 121 - 299
Target Start/End: Complemental strand, 8327669 - 8327488
Alignment:
Q  121 aacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctg-ggggtatt-nnnnnnnnt 218  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||         |    
T  8327669 aacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctggggggtattaaaaaaaaat 8327570  T
Q  219 tgaagggcagtaatactagtgggtatt-nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgc 299  Q
    || ||||||||| ||||||||||||||          |||| |||||||||||||||| |||||||||||||||||||||||    
T  8327569 tggagggcagtagtactagtgggtattaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgc 8327488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 3155285 - 3155167
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||    
T  3155285 taaatacaaggtgccg--tatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 3155188  T
Q  154 gattctaataggcctaaaaga 174  Q
     |||||||||  |||||||||    
T  3155187 aattctaataatcctaaaaga 3155167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 4505962 - 4505844
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||    
T  4505962 taaatacaaggtgccg--tatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 4505865  T
Q  154 gattctaataggcctaaaaga 174  Q
     |||||||||  |||||||||    
T  4505864 aattctaataatcctaaaaga 4505844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 6965060 - 6964968
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaata 163  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| || |||||||||    
T  6965060 gtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaata 6964968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 8907128 - 8907231
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||  | |||||||||  |||||    
T  8907128 gtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacccccacctaacaccaaaatcaagaggaattaattctaataatcctaa 8907227  T
Q  171 aaga 174  Q
    ||||    
T  8907228 aaga 8907231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 12337498 - 12337600
Alignment:
Q  72 tatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaa 171  Q
    ||||||||  ||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| || |||||||||  ||||||    
T  12337498 tatatatgtggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaa 12337597  T
Q  172 aga 174  Q
    |||    
T  12337598 aga 12337600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 3953074 - 3952989
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  |||| |||| ||||||||| |||||||||||| |||||||| |||||| ||||||||||||| |||||||    
T  3953074 taaatacaaggtgccg--tatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaacccccacctaacaccaaaa 3952989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 7162852 - 7162767
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  ||||||||| ||| || || |||||||||||||||||||||| ||||| |||||| |||||| |||||||    
T  7162852 taaatacaaggtgccg--tatatatgcggtatactcagaggtgaaaatgactaccgtatatatgaggaacccctacctaacaccaaaa 7162767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 16097076 - 16097008
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||| |||||||||  ||||||||  |||||||||||||||||||| |||||| |||||||||| ||||    
T  16097076 taaatacaaggtgccg--tatatatgatgtacacccaaaggtgaaaattactaccttatacatgaggaacc 16097008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 37182723 - 37182670
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    ||||||||||  |||||||||| |||||||| ||||||||||||||||| ||||    
T  37182723 gtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacc 37182670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 4505744 - 4505688
Alignment:
Q  255 tgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||| ||||| | |||||||| ||||||||  |||||||||||||||||||||||||    
T  4505744 tgaggcccatcattgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 4505688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 24035667 - 24035719
Alignment:
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||| ||||||||| || |||||||||||||||| |||||||||| |||||||    
T  24035667 aaacacccacctaacactaaaagcaagaggacctaattctaatagacctaaaa 24035719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 29694364 - 29694312
Alignment:
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||| ||||||    
T  29694364 aaacacccacctaacaccaaaagcaagaggacccaattctaataggtctaaaa 29694312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 38400778 - 38400726
Alignment:
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||| ||||||||| ||||||||||||| ||||  ||||||||||||||||||    
T  38400778 aaacacccacctaacaccaaaagcaagatgaccctattctaataggcctaaaa 38400726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 3155055 - 3155012
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  3155055 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 3155012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 6964844 - 6964801
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  6964844 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 6964801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 22727551 - 22727598
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatga 118  Q
    |||||||||| ||||||||||| |||||||| |||||| |||||||||    
T  22727551 gtatatatgcggtacacccaaaagtgaaaatcactaccatatacatga 22727598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 57
Target Start/End: Complemental strand, 8327720 - 8327690
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa 57  Q
    |||||||||||||||||||||||||||||||    
T  8327720 aaaaagcaatgatctatttatattttttaaa 8327690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 21190943 - 21190993
Alignment:
Q  271 gggagacccagctctgttgagctgtttgcaccccctcagggccgggcctgg 321  Q
    ||||| ||||||||  |||||||||||||||||||  ||||||||||||||    
T  21190943 gggaggcccagctccattgagctgtttgcaccccccaagggccgggcctgg 21190993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 3952951 - 3952910
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcag 309  Q
    |||||||| ||||||||  |||||||||||||||||||||||    
T  3952951 tgagggaggcccagctcgtttgagctgtttgcaccccctcag 3952910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 12134089 - 12134134
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacat 116  Q
    ||||||||||  |||||||||| |||||||| ||||||||||||||    
T  12134089 gtatatatgcgatacacccaaaagtgaaaatcactaccgtatacat 12134134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 28425759 - 28425812
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||| ||||||||||| |||||||| |||||| |||| ||||| ||||    
T  28425759 gtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgaggaacc 28425812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 30175568 - 30175519
Alignment:
Q  271 gggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
    ||||| ||||||||  |||||||||||||||||||  |||||||||||||    
T  30175568 gggaggcccagctccattgagctgtttgcaccccccaagggccgggcctg 30175519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 7162726 - 7162686
Alignment:
Q  271 gggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    ||||| ||||||||  |||||||||||||||||||||||||    
T  7162726 gggaggcccagctcgtttgagctgtttgcaccccctcaggg 7162686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 37182650 - 37182598
Alignment:
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||| ||||||||| | ||||||||||| ||||  ||||||||||||||||||    
T  37182650 aaacacccacctaacagcaaaagcaagatgacccaattctaataggcctaaaa 37182598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 38400850 - 38400798
Alignment:
Q  72 tatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||  ||||  ||||||||||||| ||||||||||||||||| ||||    
T  38400850 tatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaacc 38400798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 153; Significance: 7e-81; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 27 - 321
Target Start/End: Original strand, 13913479 - 13913783
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    |||||||||||||||||||||||||||||||       |||||| |||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  13913479 aaaaagcaatgatctatttatattttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgag 13913578  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt--nnnnnnnn 217  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||              
T  13913579 aaacccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaatgggacagaaaatggttgggggtattaaaaaaaaaa 13913678  T
Q  218 ttgaagggcagtaatactagtgggtatt-nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccggg 316  Q
    ||||||||||||| ||||||||||||||          |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  13913679 ttgaagggcagtagtactagtgggtattaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacggg 13913778  T
Q  317 cctgg 321  Q
    |||||    
T  13913779 cctgg 13913783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 54 - 320
Target Start/End: Original strand, 1366911 - 1367177
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||| |||||    
T  1366911 taaatataaggtgccg--tatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaacccccacctaacaccaaaagcaagatgacct 1367008  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt--nnnnnn 251  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||| ||||||||||||||||||||||||            
T  1367009 aattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattaaaaaattttggagggcagtaatactagtgggtattaaaatttt 1367108  T
Q  252 nnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
       |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  1367109 ttttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccgtgcctg 1367177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 54 - 320
Target Start/End: Original strand, 9173056 - 9173321
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  9173056 taaatataaggtgccg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagtaagaggacct 9173153  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt-nnnnnnn 252  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||| |||||| |||||||||||||||||            
T  9173154 aattctaataggcctaaaagactaaaacaaggggacagaaaatggctggggatattaaaaaaaattggagggcaataatactagtgggtattaaaaaaaa 9173253  T
Q  253 nntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
      |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  9173254 attgaggcccatgactgagggaggcccaactctgttgagctgtttgcaccccctcagggccgggcctg 9173321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 27 - 304
Target Start/End: Complemental strand, 19955831 - 19955547
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    |||||||||||||||||||||||||||||||       |||||||| |||  ||||||||| |||||||||||||||||||||||||||||||| |||||    
T  19955831 aaaaagcaatgatctatttatattttttaaaagataaatataaggtaccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgag 19955734  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtat-tnnnnnnnnt 218  Q
     ||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||          |    
T  19955733 gaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtataattttttttt 19955634  T
Q  219 tgaagggcagtaatactagtgggtatt-nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcacccc 304  Q
    || ||||||| | ||||||||||||||          |||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  19955633 tggagggcagcagtactagtgggtattaaaaaaaaattgaggcccatgactgagggaggtccagctctgttgagctgtttgcacccc 19955547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 27 - 320
Target Start/End: Complemental strand, 17169070 - 17168769
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||||||||| |||||||||||||||||||       |||||||||  |  ||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  17169070 aaaaagcaatgttctatttatattttttaaaagataaatataaggtgttg--tatatatgcggtacacccaaaggtgaaaatgactaccatatacatgag 17168973  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt---nnnnnnn 216  Q
     |||||| |||||| ||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||              
T  17168972 gaacccctacctaacaccaaaagcaagaagacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaagaaa 17168873  T
Q  217 nttgaagggcagtaatactagtgggtattnnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccggg 316  Q
     ||| ||||||||| ||||||||||||||         |||| |||||||||||||||| || |||||| |||||||||||||| |||||||||| ||||    
T  17168872 attggagggcagtagtactagtgggtattaaaaaaaattgaggcccatgactgagggaggccaagctctattgagctgtttgcatcccctcagggtcggg 17168773  T
Q  317 cctg 320  Q
    ||||    
T  17168772 cctg 17168769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 27 - 320
Target Start/End: Original strand, 40501789 - 40502090
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    |||||| ||||||||||||||||||||||||       ||||||||| ||  ||||||||| |||||||||||||| ||||||||||||||||||||||     
T  40501789 aaaaagtaatgatctatttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaa 40501886  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnntt 219  Q
     |||| |||||||| ||||||||||||| || || |||||||||| |||||||| |||||||||||||||||||||||||||||||||||        ||    
T  40501887 gaacctccacctaacaccaaaagcaagatgatctaattctaatagacctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaatt 40501986  T
Q  220 ga-agggcagtaatactagtgggtatt--nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccggg 316  Q
     | ||||||||| ||||||||||||||           |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  40501987 tagagggcagtagtactagtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacggg 40502086  T
Q  317 cctg 320  Q
    ||||    
T  40502087 cctg 40502090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 27 - 308
Target Start/End: Complemental strand, 27559751 - 27559459
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||||||||| |||||||||||||||||||       ||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27559751 aaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 27559654  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt---nnnnnnn 216  Q
     ||||||||||||| |||| ||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||              
T  27559653 gaacccccacctaacaccataagtaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaaa 27559554  T
Q  217 nttgaagggcagtaatactagtgggtatt---nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctca 308  Q
     ||  ||||||||| ||||||||||||||            |||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  27559553 atttgagggcagtagtactagtgggtattaaaaaaaaaaattgaggcccatgactgagggaggtccagctctgttgagctgtttgcaccccctca 27559459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 82 - 320
Target Start/End: Complemental strand, 44895706 - 44895467
Alignment:
Q  82 gtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaac 181  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  44895706 gtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaac 44895607  T
Q  182 aaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt--nnnnnnnnntgagacccatgactgagggagaccc 279  Q
    || |||||||||||||||| ||||||||        ||| ||| ||||| ||||||||| ||||           || | |||||||||||||||| |||    
T  44895606 aaagggacagaaaatggct-ggggtattaaaaaaaattggaggacagtagtactagtggatattaaaaaaaaaaatgtggcccatgactgagggaggccc 44895508  T
Q  280 agctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  44895507 agctctgttgagctgtttgcaccccctcagggccgagcctg 44895467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 23185507 - 23185366
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||    
T  23185507 taaatacaaggtgccg--tatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggaact 23185410  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatg 197  Q
     ||||||||||||||||||| |||||||||| ||||||||||||    
T  23185409 aattctaataggcctaaaaggctaaaacaagaggacagaaaatg 23185366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 54 - 320
Target Start/End: Original strand, 51607472 - 51607739
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||| | | ||||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| |    
T  51607472 taaatataaggtggccg-tatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaactcccatctaataccaaaagcaagaggacat 51607570  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttgaagggcagtaatactagtgggtatt---nnnn 249  Q
     ||||||||||||||||||| |||||| ||||| ||||||||| ||||||||||||         ||||||||||||| ||||||||| ||||           
T  51607571 aattctaataggcctaaaaggctaaaa-aagggaacagaaaat-gctgggggtattaaaaaaaaattgaagggcagtagtactagtggatattaaaaaaa 51607668  T
Q  250 nnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
         |||| ||||||| ||||| || ||||||||| |||||||||||||||| ||||| | |||||||||    
T  51607669 aaaaatgaggcccatgattgaggaaggcccagctctattgagctgtttgcaccacctcatgaccgggcctg 51607739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 9181038 - 9181155
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  9181038 taaatataaggtgccg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 9181135  T
Q  154 gattctaataggcctaaaag 173  Q
     |||||||||||||||||||    
T  9181136 aattctaataggcctaaaag 9181155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 4971666 - 4971792
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  4971666 gtatatatgcggtacacccataagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggaactaattctaataggcctaa 4971765  T
Q  171 aagactaaaacaaggggacagaaaatg 197  Q
    ||| |||||||||| ||||| ||||||    
T  4971766 aaggctaaaacaagaggacaaaaaatg 4971792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 54 - 190
Target Start/End: Complemental strand, 5316760 - 5316626
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||    
T  5316760 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 5316663  T
Q  154 gattctaataggcctaaaagactaaaacaaggggaca 190  Q
     |||||||||  |||||||| |||||||||| |||||    
T  5316662 aattctaataatcctaaaaggctaaaacaagaggaca 5316626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 44655806 - 44655703
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| || |||||||||  |||||    
T  44655806 gtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 44655707  T
Q  171 aaga 174  Q
    ||||    
T  44655706 aaga 44655703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 50881495 - 50881369
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||| | | |||||||||||||||| ||||||||||| |||| |||||||| |||||||  ||||||| || |||||||||  |||||    
T  50881495 gtatatatgcggtacatctagaggtgaaaatgactacagtatacatgaggaacctccacctaacaccaaaattaagaggaactaattctaataatcctaa 50881396  T
Q  171 aagactaaaacaaggggacagaaaatg 197  Q
    ||| |||||||||| ||||||||||||    
T  50881395 aaggctaaaacaagaggacagaaaatg 50881369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 5027629 - 5027535
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagagga 150  Q
    |||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||||    
T  5027629 taaatacaaggtgccg--tatatatgcggtacacccataggtgaaaatgactaccatatagatgaggaacccccacctaacaccaaaagcaagagga 5027535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 27906779 - 27906868
Alignment:
Q  85 cacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaaga 174  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| || |||||||||  |||||||||    
T  27906779 cacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 27906868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 14146380 - 14146295
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  ||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  14146380 taaatacaaggtgccg--tatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 14146295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 3406498 - 3406413
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  ||||||||| |||||| |  |||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  3406498 taaatacaaggtgccg--tatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 3406413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 3440322 - 3440407
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  ||||||||| |||||| |  |||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  3440322 taaatacaaggtgccg--tatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 3440407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 6771871 - 6771786
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||| ||| |||| |||||||| |||||||    
T  6771871 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaacctccacctaacaccaaaa 6771786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 41697185 - 41697255
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||||||| ||||| ||| | |||||||||||||||||||||||||| ||||||||||||| |||||||    
T  41697185 gtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 41697255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 16140120 - 16140058
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaa 133  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||| || ||||||||||    
T  16140120 gtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaatccccacctaa 16140058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 33170824 - 33170771
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||| ||||||| || ||||||||| ||||||||||||||||||||||    
T  33170824 gtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaaacc 33170771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 320
Target Start/End: Complemental strand, 23181754 - 23181711
Alignment:
Q  277 cccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
    |||||||| |||||||||||||||||||||||||||||| ||||    
T  23181754 cccagctcggttgagctgtttgcaccccctcagggccggccctg 23181711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 43235818 - 43235871
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||  |||||||||||||||||||| |||| |||||||||||| ||||    
T  43235818 gtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacc 43235871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 39134844 - 39134896
Alignment:
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||| ||||||||| ||||||||||||||||||  |||||||||||| |||||    
T  39134844 aaacacccacctaacaccaaaagcaagaggacccaattctaataggcttaaaa 39134896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 14146257 - 14146214
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  14146257 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 14146214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 41697293 - 41697336
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  41697293 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 41697336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 44655591 - 44655548
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  44655591 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 44655548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 21740970 - 21741029
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtataca 115  Q
    |||||| |||||||||  |||||||||  |||||||| ||||||||||||||||| ||||||    
T  21740970 taaatacaaggtgccg--tatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 38853587 - 38853537
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaa 121  Q
    |||||||||  ||| | |||||||||||||| |||||||||||||||||||    
T  38853587 gtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgagaa 38853537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 308
Target Start/End: Original strand, 5027991 - 5028028
Alignment:
Q  271 gggagacccagctctgttgagctgtttgcaccccctca 308  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  5027991 gggaggcccagctcggttgagctgtttgcaccccctca 5028028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 6771746 - 6771705
Alignment:
Q  270 agggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||| ||||||||  |||||||||||||||||||||||||    
T  6771746 agggaggcccagctcgtttgagctgtttgcaccccctcaggg 6771705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 124
Target Start/End: Complemental strand, 26803993 - 26803960
Alignment:
Q  91 aaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    ||||||||||| ||||||||||||||||||||||    
T  26803993 aaggtgaaaatcactaccgtatacatgagaaacc 26803960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 39134771 - 39134824
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    ||||||||||  ||||||||||||||| ||| ||||| ||||||||||| ||||    
T  39134771 gtatatatgcaatacacccaaaggtgataatcactactgtatacatgaggaacc 39134824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 124
Target Start/End: Complemental strand, 45758547 - 45758506
Alignment:
Q  83 tacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||| |||||||||||||| ||||||||||||||||| ||||    
T  45758547 tacatccaaaggtgaaaatcactaccgtatacatgaggaacc 45758506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 115
Target Start/End: Original strand, 52127521 - 52127550
Alignment:
Q  86 acccaaaggtgaaaatgactaccgtataca 115  Q
    ||||||||||||||||||||||||||||||    
T  52127521 acccaaaggtgaaaatgactaccgtataca 52127550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 5533377 - 5533329
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    |||||||||  |||||  ||||||||||||| |||||||||||||||||    
T  5533377 gtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgag 5533329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 10912112 - 10912160
Alignment:
Q  272 ggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
    |||| ||||||||  |||||||||| |||||||||||||||||| ||||    
T  10912112 ggaggcccagctcgtttgagctgttcgcaccccctcagggccggccctg 10912160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 27906962 - 27907002
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctca 308  Q
    |||||||| ||||||||  ||||||||||||||||||||||    
T  27906962 tgagggaggcccagctcgtttgagctgtttgcaccccctca 27907002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 4e-79; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 54 - 320
Target Start/End: Original strand, 38869394 - 38869659
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38869394 taaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaacaccaaaagcaagaggacct 38869491  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt-nnnnnnn 252  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||        ||| | | ||||||||||||||||||||            
T  38869492 aattctaataggcctaaaagactaaaacaaggggacagaaaatgactgggggtattaaaaaaaattggatgacagtaatactagtgggtattaaaaaaaa 38869591  T
Q  253 nntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
      |||| |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||    
T  38869592 tttgaggcccatgactgagggaggcccagctttgttgagctgtttgcaccccctcatggccgggcctg 38869659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 27 - 321
Target Start/End: Original strand, 16198791 - 16199093
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||||||||| |||||||||||||||||||       ||||||||| ||  |||||||||  |||||||||||||||||||||||||||||||||||||    
T  16198791 aaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcg--tatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgag 16198888  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnt 218  Q
     ||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||         |    
T  16198889 gaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaat 16198988  T
Q  219 tgaagggcagtaatactagtgggtatt--nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccggg 316  Q
    || ||||||||| || |||||||||||           |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  16198989 tggagggcagtagtattagtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccgcg 16199088  T
Q  317 cctgg 321  Q
    |||||    
T  16199089 cctgg 16199093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 29 - 320
Target Start/End: Original strand, 40389535 - 40389831
Alignment:
Q  29 aaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaa 121  Q
    ||||||||| |||||||||||||||||||       ||||||||| ||  ||||||||| ||||| |||||||||||||||||||||||||  ||||| |    
T  40389535 aaagcaatgttctatttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgagga 40389632  T
Q  122 acccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttga 221  Q
    |||||||||||| || |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||        |||     
T  40389633 acccccacctaacactaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaacaattgg 40389732  T
Q  222 agggcagtaatactagtgggtattnnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
    | |||| || ||||||||||||||         ||||  ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  40389733 atggcaatagtactagtgggtattaaaaaaaattgaggtccatgactgagggaggcccaggtctgttgagctgtttgcacccgctcagggccgggcctg 40389831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 28 - 301
Target Start/End: Complemental strand, 9364393 - 9364113
Alignment:
Q  28 aaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgaga 120  Q
    |||||||||| |||||||||||||||||||       ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||     
T  9364393 aaaagcaatgttctatttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 9364296  T
Q  121 aacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnntt 219  Q
    ||||||||||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||         ||    
T  9364295 aacccccacctaacatcaaaagcaagaggacctaattctaatagacctaaaagactaaaacaaggggacataaaatggctgggggtattaaaaaaaaatt 9364196  T
Q  220 gaagggcagtaatactagtgggtatt-nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcac 301  Q
    | || |||||| ||||||||| ||||          |||| |||||||||||||||| |||||||||||||||||||||||||    
T  9364195 ggagagcagtagtactagtggatattaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcac 9364113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 27 - 320
Target Start/End: Complemental strand, 27924185 - 27923885
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    |||||||||||| ||||||||||||||||||       ||||||||||||  ||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  27924185 aaaaagcaatgacctatttatattttttaaaagataaatataaggtgccg--tatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgag 27924088  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnt 218  Q
     ||| ||| ||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||         |    
T  27924087 gaacgcccgcctaacaccaaaagcaaaaggacctaattctaataggcctaaaagactaaaacaaggagacagaaaatggttggggatattaaaaaaaaat 27923988  T
Q  219 tgaagggcagtaatactagtgggtatt-nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggc 317  Q
    || ||||||||| ||||||||||||||          |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||    
T  27923987 tggagggcagtagtactagtgggtattaaaaaaaaattgaggcccatgactgagggaggtccagctctgttgagctgtttgcaccccctcagggacgggc 27923888  T
Q  318 ctg 320  Q
    |||    
T  27923887 ctg 27923885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 27 - 320
Target Start/End: Complemental strand, 7671028 - 7670728
Alignment:
Q  27 aaaaagcaatgatctatttatatttttt--------aaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatga 118  Q
    ||||||||||| ||||||||||||||||        |||||||||||||||  ||||| | | |||||||||||||||||||||||||||||||||||||    
T  7671028 aaaaagcaatgttctatttatatttttttaaaagataaatataaggtgccg--tatatttacggtacacccaaaggtgaaaatgactaccgtatacatga 7670931  T
Q  119 gaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnn 217  Q
    |  | |||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||             
T  7670930 ggtatccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaa 7670831  T
Q  218 ttgaagggcagtaatactagtgggtatt-nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccggg 316  Q
    ||| ||| ||||| ||||||||||| ||          | ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  7670830 ttggaggacagtagtactagtgggtgttaaaaaaaaattaagacccatgactgagggaggcccaactctgttgagctgtttgca-cccctcagggccggg 7670732  T
Q  317 cctg 320  Q
    ||||    
T  7670731 cctg 7670728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 54 - 308
Target Start/End: Original strand, 16799358 - 16799610
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  16799358 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccacataacaccaaaagcaagaggacct 16799455  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt-nnnnnnn 252  Q
     |||||||||| ||||||||||||||||||||||||| |||| |||||||||||||        ||| ||||||||||||||| ||||| ||            
T  16799456 aattctaatagacctaaaagactaaaacaaggggaca-aaaaaggctgggggtattaaaaaaagttggagggcagtaatactaatgggtgttaaaaaaaa 16799554  T
Q  253 nntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctca 308  Q
      |||| |||||||||||||||| || |||||| ||||||||||||||||||||||    
T  16799555 attgaggcccatgactgagggaggcctagctctattgagctgtttgcaccccctca 16799610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 54 - 245
Target Start/End: Original strand, 28822373 - 28822563
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  28822373 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatgaacccccacctaacaccaaaagcaagaggacct 28822470  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggct-gggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt 245  Q
     |||||||||||||||||||||||||||||||||||| ||||||| | |||||||||        ||| |||||||||||||||||| |||||    
T  28822471 aattctaataggcctaaaagactaaaacaaggggacataaaatggttggggggtattaaaaacaattggagggcagtaatactagtgtgtatt 28822563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 16592120 - 16592243
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||||| || |||||||||  |||||    
T  16592120 gtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 16592219  T
Q  171 aagactaaaacaaggggacagaaa 194  Q
    ||| ||||||||||  ||||||||    
T  16592220 aaggctaaaacaagatgacagaaa 16592243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 27079080 - 27078939
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||||| |||||||   |||||| ||    
T  27079080 taaatacaaggtgccg--tatatatgcggtacacctaaaggtgaaaatgactactgtatacatgaggaacccccacctaacaccaaaatatagaggaact 27078983  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatg 197  Q
     |||| ||||  |||||||| |||||||||| ||||||||||||    
T  27078982 aattccaataatcctaaaaggctaaaacaagaggacagaaaatg 27078939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 34756397 - 34756515
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||||| |||||||| ||    
T  34756397 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaacaaaatcaagaggaact 34756494  T
Q  154 gattctaataggcctaaaaga 174  Q
     |||||||||  |||||||||    
T  34756495 aattctaataatcctaaaaga 34756515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 30854398 - 30854258
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| |||||| || ||||||||||||||| |||||||||||| ||||||||||||| |||||||  ||||||| ||    
T  30854398 taaatacaaggtgccg--tatatatgcggtacactcagaggtgaaaatgactatcgtatacatgaggaacccccacctaacaccaaaa-taagaggaact 30854302  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatg 197  Q
     |||||||||  |||||||| |||||||||| ||||| ||||||    
T  30854301 aattctaataatcctaaaaggctaaaacaagaggacataaaatg 30854258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 36187910 - 36187995
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  36187910 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaaacctccacctaacaccaaaa 36187995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 19523268 - 19523183
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  19523268 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaaa 19523183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 2274944 - 2274874
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||||||| ||||||||| |||||||||||||||||||||||| ||| ||||||||||||| |||||||    
T  2274944 gtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgaggaacccccacctaacaccaaaa 2274874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 15480135 - 15480205
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||| ||||||||||||| |||||||    
T  15480135 gtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaacaccaaaa 15480205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 22986604 - 22986658
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaaccc 125  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  22986604 gtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagaaaccc 22986658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 23284108 - 23284164
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaaccccc 127  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||    
T  23284108 gtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgaggaaccccc 23284164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 83 - 124
Target Start/End: Original strand, 40794385 - 40794426
Alignment:
Q  83 tacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  40794385 tacaccaaaaggtgaaaatcactaccgtatacatgagaaacc 40794426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 36868922 - 36868970
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    |||||||||  ||||||||||| |||||||| |||||||||||||||||    
T  36868922 gtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgag 36868970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 15480243 - 15480286
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  15480243 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 15480286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 19523145 - 19523102
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  19523145 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 19523102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 31881604 - 31881647
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  31881604 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 31881647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 31194643 - 31194705
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    |||||| |||||||||  ||||||||| ||| ||||| |||||||||| |||||||||||||||||    
T  31194643 taaatacaaggtgccg--tatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgag 31194705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 34756628 - 34756670
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcagg 310  Q
    |||||||| ||||||||  ||||||||||||||||||||||||    
T  34756628 tgagggaggcccagctcgtttgagctgtttgcaccccctcagg 34756670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 2530943 - 2530996
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||| | ||||| |||||||||||||| ||||| ||||||||||| ||||    
T  2530943 gtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacc 2530996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 10543727 - 10543682
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacat 116  Q
    ||||||||||  |||| |||||||||||||| ||||||||||||||    
T  10543727 gtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat 10543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 15639620 - 15639575
Alignment:
Q  127 cacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    ||||||| |||||||| |||||||||  ||||||||||||||||||    
T  15639620 cacctaacaccaaaagtaagaggacccaattctaataggcctaaaa 15639575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 33037834 - 33037781
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||  |||||||||||||||||||  | ||||||||||||||| ||||    
T  33037834 gtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgaggaacc 33037781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 34425877 - 34425832
Alignment:
Q  127 cacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    ||||||| |||||||||||||||||   ||||||||||||||||||    
T  34425877 cacctaacaccaaaagcaagaggactcaattctaataggcctaaaa 34425832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 14318503 - 14318555
Alignment:
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||| ||||||||| ||||||||||||||||||   || ||||||||||||||    
T  14318503 aaacacccacctaagaccaaaagcaagaggacccagttttaataggcctaaaa 14318555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 26718995 - 26719043
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||||||||  ||||| ||||||||||||| ||||||| |||||||||    
T  26718995 gtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26719043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 26988739 - 26988787
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||||||||  ||||| ||||||||||||| ||||||| |||||||||    
T  26988739 gtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26988787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 28822580 - 28822612
Alignment:
Q  277 cccagctctgttgagctgtttgcaccccctcag 309  Q
    |||| ||||||||||||||||||||||||||||    
T  28822580 cccaactctgttgagctgtttgcaccccctcag 28822612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 6e-78; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 54 - 316
Target Start/End: Original strand, 27788722 - 27788984
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  27788722 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagatgacct 27788819  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt--nnnnnn 251  Q
     ||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||        ||| ||||||||||||||||||||||||            
T  27788820 aattttaataggcctaaaagactaaaataaggggacagaaaatggttgggggtattaaaaaaaattggagggcagtaatactagtgggtattaaaaaaaa 27788919  T
Q  252 nnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccggg 316  Q
       |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27788920 atttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccggg 27788984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 27 - 320
Target Start/End: Original strand, 235224 - 235525
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  235224 aaaaagcaatgatctatttatattttttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgag 235323  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnt 218  Q
    ||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || |||||||         |    
T  235324 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaa-gggacagaaaatggttgagggtattaaaaaaaatt 235421  T
Q  219 tgaagggcagtaatactagtgggtatt--nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccggg 316  Q
    || ||||||||| ||||||||||||||           | ||  ||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||    
T  235422 tggagggcagtagtactagtgggtattaaaaaaaaaattaaggtccatgactgagggaggcccagctctgttaagctgtttgcaccccctcagggacggg 235521  T
Q  317 cctg 320  Q
    ||||    
T  235522 cctg 235525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 54 - 320
Target Start/End: Original strand, 20711754 - 20712018
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| |  |||||||||| |||||    
T  20711754 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccatctaacattaaaagcaagatgacct 20711851  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt--nnnnnn 251  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||        ||| ||| ||||||||||||||||||||            
T  20711852 aattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt--aaaaaattggaggacagtaatactagtgggtattaaaaaaaa 20711949  T
Q  252 nnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
       |||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  20711950 aattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacctcctcagggccgggcctg 20712018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 27 - 320
Target Start/End: Complemental strand, 17354060 - 17353759
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||||||||| |||||||||||||||||||       ||||||||| ||  ||||||||| ||||||||||| ||||||||||||| |||||||||||     
T  17354060 aaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgat 17353963  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt--nnnnnnnn 217  Q
     ||||||||||||| ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||              
T  17353962 gaacccccacctaacaccaaaagcaagaggacctaattctaatagacctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaaa 17353863  T
Q  218 ttgaagggcagtaatactagtgggtatt-nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccggg 316  Q
    ||  ||||||||| ||||||||||||||          |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17353862 ttagagggcagtagtactagtgggtattaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccggg 17353763  T
Q  317 cctg 320  Q
    ||||    
T  17353762 cctg 17353759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 27 - 320
Target Start/End: Complemental strand, 28075889 - 28075588
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||||||||| |||||||||||||||||||       ||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||    
T  28075889 aaaaagcaatgttctatttatattttttaaaagataaatataaggtgccg--tatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgag 28075792  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnt 218  Q
     ||||||||||||| ||||||| ||||||||||| |||||||||||| |||||| ||||||||||| |||||||||||||||||||||||         |    
T  28075791 gaacccccacctaacaccaaaaacaagaggacctaattctaataggcataaaaggctaaaacaaggagacagaaaatggctgggggtattaaaaaaaaat 28075692  T
Q  219 tgaagggcagtaatactagtgggtatt--nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccggg 316  Q
    || ||| ||||| ||||||||||||||           |||  ||||||||||| |||  || |||||||||||||||||||||||||||||| ||||||    
T  28075691 tggaggacagtagtactagtgggtattaaaaaaaaaattgaagcccatgactgaaggaagcctagctctgttgagctgtttgcaccccctcagagccggg 28075592  T
Q  317 cctg 320  Q
    ||||    
T  28075591 cctg 28075588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 82 - 320
Target Start/End: Complemental strand, 19987207 - 19986966
Alignment:
Q  82 gtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaac 181  Q
    ||||||||||| |||||||||  |||| ||||||| || || |||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  19987207 gtacacccaaatgtgaaaatggttaccatatacataaggaatccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaac 19987108  T
Q  182 aaggggacagaaaatggctgggggtatt-nnnnnnnnttgaagggcagtaatactagtgggtatt--nnnnnnnnntgagacccatgactgagggagacc 278  Q
    |||||||| |||||||||||||||||||         ||||||||||||| ||||||||||||||           |||| ||||| | |||||||| ||    
T  19987107 aaggggacggaaaatggctgggggtattaaaaaaaaattgaagggcagtagtactagtgggtattaaaaaaaaatttgaggcccataattgagggaggcc 19987008  T
Q  279 cagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  19987007 cagctctgttgagctgtttgcacccccttagggccgggcctg 19986966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 71 - 245
Target Start/End: Complemental strand, 34397914 - 34397740
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||||| |||||| |||||||||| |||| ||||||| |||| |||| ||| ||||||||||||| ||||| ||||||||||||||||    
T  34397914 gtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgaggaacctccacttaacaccaaaagcaagaagacctaattctaataggcctaa 34397815  T
Q  171 aagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt 245  Q
    ||| |||||||||| ||||||||||||| ||||||||||        ||||||||||||| ||||||||||||||    
T  34397814 aaggctaaaacaagaggacagaaaatggttgggggtattaaaaaaaattgaagggcagtattactagtgggtatt 34397740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 19737726 - 19737867
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||    
T  19737726 taaatacaaggtgccg--tatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 19737823  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatg 197  Q
     ||| |||||  |||||||| |||||||||| ||||||||||||    
T  19737824 aattttaataatcctaaaaggctaaaacaagaggacagaaaatg 19737867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 13727433 - 13727551
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||    
T  13727433 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 13727530  T
Q  154 gattctaataggcctaaaaga 174  Q
     |||||||||  |||||||||    
T  13727531 aattctaataatcctaaaaga 13727551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 21479566 - 21479448
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||    
T  21479566 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 21479469  T
Q  154 gattctaataggcctaaaaga 174  Q
     |||||||||  |||||||||    
T  21479468 aattctaataatcctaaaaga 21479448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 33774189 - 33774071
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||    
T  33774189 taaatacaaggtgccg--tatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 33774092  T
Q  154 gattctaataggcctaaaaga 174  Q
     |||||||||  |||||||||    
T  33774091 aattctaataatcctaaaaga 33774071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 21280617 - 21280499
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||| ||||||||||||||||||||||| ||| ||||||||| ||||||| |||||||| ||    
T  21280617 taaatacaaggtgccg--tatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaactcccacctaacaccaaaatcaagaggaact 21280520  T
Q  154 gattctaataggcctaaaaga 174  Q
     |||||||||  |||||||||    
T  21280519 aattctaataatcctaaaaga 21280499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 24711033 - 24711118
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  ||||||||  |||||| || |||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  24711033 taaatacaaggtgccg--tatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 24711118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 30832573 - 30832643
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||||||  ||||||||| || |||||||||||||||||| |||||| ||||||||||||| |||||||    
T  30832573 gtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaacccccacctaacaccaaaa 30832643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 1155899 - 1155946
Alignment:
Q  72 tatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||||||    
T  1155899 tatatatgcggtacatccagaggtgaaaatgactaccgtatacatgag 1155946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 21183724 - 21183777
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||  |||||||||||| ||||||| ||||||||||||||||| ||||    
T  21183724 gtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacc 21183777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 13727663 - 13727706
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  13727663 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 13727706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 19741237 - 19741280
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  19741237 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 19741280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 21280385 - 21280342
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  21280385 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 21280342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 27314778 - 27314821
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  27314778 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 27314821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 11081684 - 11081746
Alignment:
Q  255 tgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggc 317  Q
    |||| |||||| || |||||| || |||||  |||||||||||||||||||| ||||||||||    
T  11081684 tgaggcccatgccttagggaggcctagctccattgagctgtttgcaccccctaagggccgggc 11081746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 27994815 - 27994778
Alignment:
Q  82 gtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  27994815 gtacactcaaaggtgaaaatcactaccgtatacatgag 27994778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 30121743 - 30121706
Alignment:
Q  135 accaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  30121743 accaaaagcaagaggacccgattctaatagacctaaaa 30121706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 1156033 - 1156073
Alignment:
Q  270 agggagacccagctctgttgagctgtttgcaccccctcagg 310  Q
    ||||||||| |||||  ||||||||||||||||||||||||    
T  1156033 agggagacctagctcgtttgagctgtttgcaccccctcagg 1156073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 2477634 - 2477686
Alignment:
Q  72 tatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||  |||||| ||| |||||||| ||||||||||||||||| ||||    
T  2477634 tatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 2477686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 20611830 - 20611794
Alignment:
Q  88 ccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  20611830 ccaaaggtgaaaatcactaccgtatacatgaggaacc 20611794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 23070903 - 23070943
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctca 308  Q
    |||||||| ||||||||  ||||||||||||||||||||||    
T  23070903 tgagggaggcccagctcgtttgagctgtttgcaccccctca 23070943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 4e-76; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 27 - 320
Target Start/End: Complemental strand, 42600885 - 42600584
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||    
T  42600885 aaaaagcaatgatctatttatattttttaaaagataaatataaggtgccg--tatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgag 42600788  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnt 218  Q
     ||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||         |    
T  42600787 gaacccccacctaacaccaaaagcaagaagacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctggggttattaaattttttt 42600688  T
Q  219 tgaagggcagtaatactagtgggtatt--nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccggg 316  Q
    || ||||||||| ||||||||||||||           |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  42600687 tggagggcagtagtactagtgggtattaaaaataaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacggg 42600588  T
Q  317 cctg 320  Q
    ||||    
T  42600587 cctg 42600584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 54 - 320
Target Start/End: Original strand, 23798295 - 23798561
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  23798295 taaatataaggtgccg--tatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 23798392  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt--nnnnnn 251  Q
     |||||||||||||||||||||||||||||||||||||||||||| ||||||||||        ||| ||||||||||||||||||||||||            
T  23798393 aattctaataggcctaaaagactaaaacaaggggacagaaaatggttgggggtattaaaaacaattggagggcagtaatactagtgggtattaaaaaaaa 23798492  T
Q  252 nnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
       |||| |||||||||||||||| ||||||| |||||||||||| ||||||||||| |||| ||||||    
T  23798493 atttgaggcccatgactgagggaggcccagctttgttgagctgttcgcaccccctcaaggccaggcctg 23798561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 27 - 322
Target Start/End: Complemental strand, 10917494 - 10917192
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||| |||||||||||||||||||||||||       ||||||||||||  ||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  10917494 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccttatacatgag 10917397  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnt 218  Q
     ||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||         |    
T  10917396 gaacccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaattttttt 10917297  T
Q  219 tgaagggcagtaatactagtgggtatt-nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggc 317  Q
    ||||| |||||| ||||||||||||||          || | ||||||| |||||||| |||||||||||||||||||||||||||||||| || |||||    
T  10917296 tgaagagcagtagtactagtgggtattaaaaaaaaattgtggcccatgagtgagggaggcccagctctgttgagctgtttgcaccccctcaaggacgggc 10917197  T
Q  318 ctggt 322  Q
    |||||    
T  10917196 ctggt 10917192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 54 - 313
Target Start/End: Original strand, 23606663 - 23606914
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  23606663 taaatataaggtgccg--tatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 23606760  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt--nnnnnn 251  Q
     ||||||||||||||||||||||||||||||||||||        |||||||||||        ||| ||||||||| ||||||||||||||            
T  23606761 aattctaataggcctaaaagactaaaacaaggggaca--------ctgggggtattaaaaaaaattggagggcagtattactagtgggtattaaaagaaa 23606852  T
Q  252 nnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggcc 313  Q
       |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  23606853 atttgaggcccatgactgagggaggcccaactctgttgagctgtttgcaccccctcagggcc 23606914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 45475886 - 45475745
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||    
T  45475886 taaatacaaggtgccg--tatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggaact 45475789  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatg 197  Q
     ||||||||||||||||||| |||||||||| ||||||||||||    
T  45475788 aattctaataggcctaaaaggctaaaacaagaggacagaaaatg 45475745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 41879235 - 41879109
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| || |||||||||  |||||    
T  41879235 gtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 41879136  T
Q  171 aagactaaaacaaggggacagaaaatg 197  Q
    ||| |||||||||| ||||||||||||    
T  41879135 aaggctaaaacaagaggacagaaaatg 41879109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 13534735 - 13534861
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||| | || |||||||||  |||||    
T  13534735 gtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagagaaactaattctaataatcctaa 13534834  T
Q  171 aagactaaaacaaggggacagaaaatg 197  Q
    ||| |||||||||| ||||||||||||    
T  13534835 aaggctaaaacaagaggacagaaaatg 13534861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 13624275 - 13624401
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||| | || |||||||||  |||||    
T  13624275 gtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagagaaactaattctaataatcctaa 13624374  T
Q  171 aagactaaaacaaggggacagaaaatg 197  Q
    ||| |||||||||| ||||||||||||    
T  13624375 aaggctaaaacaagaggacagaaaatg 13624401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 30883383 - 30883280
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| || |||||||||  |||||    
T  30883383 gtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 30883284  T
Q  171 aaga 174  Q
    ||||    
T  30883283 aaga 30883280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 5860778 - 5860896
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| |||||| ||||||| |||||||| ||    
T  5860778 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaaaccccaacctaacaccaaaatcaagaggaact 5860875  T
Q  154 gattctaataggcctaaaaga 174  Q
     |||||||||  |||||||||    
T  5860876 aattctaataatcctaaaaga 5860896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 2952270 - 2952373
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| || |||||||||  |||||    
T  2952270 gtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 2952369  T
Q  171 aaga 174  Q
    ||||    
T  2952370 aaga 2952373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 3048551 - 3048669
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||| | || ||||||||||||||||||||| ||| ||||| ||||||| ||||||| |||||||| ||    
T  3048551 taaatacaaggtgccg--tatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaaccctcacctaacaccaaaatcaagaggaact 3048648  T
Q  154 gattctaataggcctaaaaga 174  Q
     |||||||||  |||||||||    
T  3048649 aattctaataatcctaaaaga 3048669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 41677295 - 41677347
Alignment:
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  41677295 aaacacccacctaacaccaaaagcaagaggacccgattctaataggcctaaaa 41677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 7944556 - 7944624
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||| |||||||||  ||||||||  |||||||||||||||||||| ||||||||||||||||| ||||    
T  7944556 taaatacaaggtgccg--tatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgaggaacc 7944624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 34789911 - 34789962
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaa 122  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  34789911 gtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagaaa 34789962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 5942750 - 5942697
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  5942750 gtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacc 5942697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 37430192 - 37430277
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  |||||||||  |||||| | |||| ||||||||||||||||||||||| ||||| ||| ||| |||||||    
T  37430192 taaatacaaggtgccg--tatatatgcgttacacctagaggtaaaaatgactaccgtatacatgaggaaccctcacgtaacaccaaaa 37430277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 11290159 - 11290113
Alignment:
Q  126 ccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||||    
T  11290159 ccacctaataccaaaagcaacaggacccaattctaataggcctaaaa 11290113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 8102966 - 8102913
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||| ||||||| |||||||||||| | ||||||||||||||| ||||    
T  8102966 gtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacc 8102913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 11290238 - 11290185
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||  |||||| ||||||||||||| ||||||||||||||||| ||||    
T  11290238 gtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagcaacc 11290185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 25561635 - 25561680
Alignment:
Q  127 cacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||    
T  25561635 cacctaacaccaaaagcaagaggacccaattctaataggcctaaaa 25561680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 8102889 - 8102845
Alignment:
Q  126 ccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||    
T  8102889 ccacctaacaccaaaagcaagaggacccaattctaataggcctaa 8102845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 39332455 - 39332507
Alignment:
Q  72 tatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||| || ||||| |||||||||||||| ||||||||||||||||| ||||    
T  39332455 tatataagcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacc 39332507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 2952486 - 2952529
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  2952486 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 2952529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 5861009 - 5861052
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  5861009 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 5861052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 15078827 - 15078759
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||||||| |  |||||||||  |||||||||| |||||||| |||| |||||||||||| ||||    
T  15078827 taaatataaggtgctg--tatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 15078759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 15167540 - 15167587
Alignment:
Q  125 cccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    ||||||||| |||||||| |||||||||  ||||||||||||||||||    
T  15167540 cccacctaacaccaaaagtaagaggacccaattctaataggcctaaaa 15167587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 15270142 - 15270193
Alignment:
Q  271 gggagacccagctctgttgagctgtttgcaccccctcagggccgggcctggt 322  Q
    ||||| ||||||||||| |||||||||||||| || ||||||||| ||||||    
T  15270142 gggaggcccagctctgtagagctgtttgcacctccccagggccggccctggt 15270193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 20003890 - 20003933
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  20003890 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 20003933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 320
Target Start/End: Complemental strand, 45472234 - 45472191
Alignment:
Q  277 cccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||    
T  45472234 cccagctcggttgagctgtttgcaccccctcaggaccggccctg 45472191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 3048787 - 3048828
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcag 309  Q
    |||||||| ||||||||  |||||||||||||||||||||||    
T  3048787 tgagggaggcccagctcgtttgagctgtttgcaccccctcag 3048828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 8646174 - 8646129
Alignment:
Q  127 cacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    ||||||| ||||||||||||| ||||| |||| |||||||||||||    
T  8646174 cacctaacaccaaaagcaagatgacctaattcgaataggcctaaaa 8646129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 15167464 - 15167517
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    ||||||||||  |||||||||| |||||||| |||| |||||||||||| ||||    
T  15167464 gtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 15167517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 38009203 - 38009240
Alignment:
Q  86 acccaaaggtgaaaatgactaccgtatacatgagaaac 123  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  38009203 acccaaaggtgaaaattactaccatatacatgagaaac 38009240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 7944644 - 7944696
Alignment:
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||| ||||||||| |||||||||||||||||   ||| ||||||||||||||    
T  7944644 aaacacccacctaacaccaaaagcaagaggacacaattttaataggcctaaaa 7944696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 4e-73; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 54 - 320
Target Start/End: Original strand, 2790774 - 2791040
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  2790774 taaatataaggtaccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaatggcaaaagcaagaggacct 2790871  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt--nnnnnn 251  Q
     |||||||||||||||||||||||||||||||||||| ||||||||||||||||||        ||||||| ||||||||||||||||| ||            
T  2790872 aattctaataggcctaaaagactaaaacaaggggacataaaatggctgggggtattaaaaataattgaaggacagtaatactagtgggttttcaaaaaaa 2790971  T
Q  252 nnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
       |||   ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  2790972 aattgacgtccatgactgagggagacccagctctgttgagctgtttgcaccccctcagagtcgggcctg 2791040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 324 - 465
Target Start/End: Original strand, 44932237 - 44932378
Alignment:
Q  324 ccttgatataagactatttataaaatttcacaaacattgatcattacttttccagaaatagtcctatttaaagcaatgtctaaatctcagtaatacctca 423  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  44932237 ccttgatataagactatttataaaatttcacaaacattgatcattacttttccagaaatagtcctatttaaagcaatgtctaaatctcagtaatacctcc 44932336  T
Q  424 gcccaatggtgaagttttagcatgggaaagggaagttgtttt 465  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44932337 gcccaatggtgaagttttagcatgggaaagggaagttgtttt 44932378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 54 - 319
Target Start/End: Complemental strand, 32128658 - 32128394
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  32128658 taaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacataagaaacccccacctaacaccaaaagcaagaggacct 32128561  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt--nnnnnn 251  Q
     |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||        ||| ||| ||||||||||||||||||||            
T  32128560 aattctaataggcctaaaagactgaaacaaggggacataaaatggctgggggtattaaaaaaaattggaggacagtaatactagtgggtattaaaaaaaa 32128461  T
Q  252 nnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcct 319  Q
       ||||  |||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  32128460 aattgaggtccataactgagggaggcccagctctgttgagctgtttgcaccccctca-ggccgggcct 32128394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 54 - 317
Target Start/End: Complemental strand, 40089590 - 40089328
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  40089590 taaatataaggtgccg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 40089493  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttgaagggcagtaatactagtgggtatt-nnnnnn 251  Q
     ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||         ||| |||||| || ||||||||||||||           
T  40089492 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgagggtattaaaaaaaaattggagggcactagtactagtgggtattaaaaaaa 40089393  T
Q  252 nnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggc 317  Q
       |||| |||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  40089392 aattgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcatggccgggc 40089328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 82 - 321
Target Start/End: Complemental strand, 24969485 - 24969241
Alignment:
Q  82 gtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaac 181  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| || ||||||||||||||||||| |||||||    
T  24969485 gtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggatctaattctaataggcctaaaaggctaaaac 24969386  T
Q  182 aaggggacagaaaatggctgggggtatt---nnnnnnnnttgaagggcagtaatactagtgggtatt--nnnnnnnnntgagacccatgactgagggaga 276  Q
    ||||||||||||||||||||||||||||           ||| ||||||||| ||||||||||||||           |||| ||||||||||||||||     
T  24969385 aaggggacagaaaatggctgggggtattaaaaaaaaaaattggagggcagtagtactagtgggtattaaaaaaaaaattgaggcccatgactgagggagg 24969286  T
Q  277 cccagctctgttgagctgtttgcaccccctcagggccgggcctgg 321  Q
    |||||||||||||||||||||||||||||||||||| || |||||    
T  24969285 cccagctctgttgagctgtttgcaccccctcagggctggacctgg 24969241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 27 - 322
Target Start/End: Complemental strand, 34027687 - 34027386
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||||||||| |||||||||||||||||||       ||||||||| ||  ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  34027687 aaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactacggtatacatgag 34027590  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnntt 219  Q
     ||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||        ||    
T  34027589 gaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtatt-aaaaaaatt 34027491  T
Q  220 gaagggcagtaatactagtgggtatt--nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggc 317  Q
    |  |||||||| ||| |  |||||||           |||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| ||| |||    
T  34027490 ggcgggcagtagtaccatagggtattaaaaaaaaaattgaggcccatgactgagggagacccagctctgttgagcagtttgcactccctcagagccaggc 34027391  T
Q  318 ctggt 322  Q
    |||||    
T  34027390 ctggt 34027386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 54 - 320
Target Start/End: Complemental strand, 19498576 - 19498313
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||    ||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  19498576 taaatataaggtgccg----tatatgcggtacagccaaaggtgaaaatgactactgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 19498481  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt-nnnnnnn 252  Q
     ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||        ||| ||||||||| ||||||||||||||            
T  19498480 aattctaataggcctaaaaggctaaaacaaggggacagataatggctgggggtattaaaaaaaattggagggcagtagtactagtgggtattaaaaaaaa 19498381  T
Q  253 nntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
      |||| ||||||| || ||||| |||||| |||||||||| |||||||||| |||||||||||||||    
T  19498380 attgaggcccatgattgggggaggcccagcactgttgagctatttgcaccccgtcagggccgggcctg 19498313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 54 - 320
Target Start/End: Complemental strand, 16845095 - 16844827
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||| ||  ||||||||  |||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  16845095 taaatataaggtgtcg--tatatatgtagtacacccaacggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagatgacct 16844998  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttgaagggcagtaatactagtgggtatt---nnnn 249  Q
     ||||||||||||||||||||||||||||||||||||||||||||  |||||||||         ||| ||| ||||||||||||||||||||           
T  16844997 aattctaataggcctaaaagactaaaacaaggggacagaaaatggtcgggggtattaaaaaaaaattggaggacagtaatactagtgggtatttaaaaaa 16844898  T
Q  250 nnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
         |||| |||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  16844897 aaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcatagccgggcctg 16844827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 82 - 322
Target Start/End: Original strand, 38352314 - 38352556
Alignment:
Q  82 gtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaac 181  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  38352314 gtacacccaaaggtgaaaatgactaccgtgtacatgaggaacccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaac 38352413  T
Q  182 aaggggacagaaaatggctgggggtatt-nnnnnnnnttgaagggcagtaatactagtgggtatt--nnnnnnnnntgagacccatgactgagggagacc 278  Q
    ||||||||||||||||||||||||||||         ||| | ||||||| ||||||||||||||           |||| ||||||||| |||||| ||    
T  38352414 aaggggacagaaaatggctgggggtattaaaaaaaaattggaaggcagtagtactagtgggtattaattttttttttgaggcccatgactaagggaggcc 38352513  T
Q  279 cagctctgttgagctgtttgcaccccctcagggccgggcctggt 322  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  38352514 cagctctgttgagctgtttgca-cccctcagggccgggcctggt 38352556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 54 - 320
Target Start/End: Original strand, 37777256 - 37777525
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| ||||| || |||| ||||||||||||| |||||    
T  37777256 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccctcaactaacaccaaaagcaagatgacct 37777353  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt--nnnnnnnnttgaagggcagtaatactagtgggtatt---nnn 248  Q
     ||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||          ||| ||||||||| ||||||||||||||          
T  37777354 aattctaataggcctaaaaggctaaaacaaggggacagaaaatagctggaggtattaaaaaaaaaattggagggcagtagtactagtgggtattaaaaaa 37777453  T
Q  249 nnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
          |||| ||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  37777454 aaaaattgaggcccatgattgagggaggtccagctctgttgagctgtttgcaccccctcaaggccgggcctg 37777525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 43455564 - 43455717
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||| ||||||||||    
T  43455564 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccgaaagtaagaggacct 43455661  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt 209  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43455662 aattcaaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt 43455717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 54 - 320
Target Start/End: Original strand, 16882428 - 16882693
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||||||||||||| ||||||| |  ||||||| |||||||||||||||||||||||  ||| | ||||| ||||||| |||||||||||||||||||    
T  16882428 taaatataaggtgccgtgtatatacg--gtacaccaaaaggtgaaaatgactaccgtatgtatggggaaccctcacctaacaccaaaagcaagaggacct 16882525  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttgaagggcagtaatactagtgggtatt-nnnnnnn 252  Q
     ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||        ||| ||||||||||||||||||||||||            
T  16882526 aattctaataggcctaaaaggctaaaacaaggggacagaaaatagctgggggtattaaaaaaaattggagggcagtaatactagtgggtattaaaaaaaa 16882625  T
Q  253 nntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
      |||| | ||||||| |||||  |||||||||||||||||||||||||| ||||||  |||||||||    
T  16882626 attgaggctcatgactaagggaagcccagctctgttgagctgtttgcacctcctcagaaccgggcctg 16882693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 27 - 317
Target Start/End: Original strand, 54083241 - 54083541
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||| |||||||||||||||||||||||||       ||||||||||||  ||||||||| |||||||||||| | |||||||||||||||||||||||    
T  54083241 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaagataaaaatgactaccgtatacatgag 54083338  T
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt---nnnnnnn 216  Q
     |||||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||              
T  54083339 gaacccctacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggagacagaaaatggctaggggtattaaaaaaataa 54083438  T
Q  217 nttgaagggcagtaatactagtgggtatt--nnnnnnnnntgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccg 314  Q
      || ||| ||||| ||||||||||||||           |||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||| ||    
T  54083439 aatggaggacagtagtactagtgggtattaaaaaaaaaattgaggcccatgactgagggatgcccagctctattgagctgtttgcaccccctcagggacg 54083538  T
Q  315 ggc 317  Q
    |||    
T  54083539 ggc 54083541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 47129061 - 47128920
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||    
T  47129061 taaatacaaggtgccg--tatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 47128964  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatg 197  Q
     |||||||||  |||||||| |||||||||| ||||||||||||    
T  47128963 aattctaataatcctaaaaggctaaaacaagaggacagaaaatg 47128920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 35465166 - 35465040
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||||| ||| |||||||| ||||||||||||||||| || |||||||||| ||||||||||| | ||||| ||||||||||||||||    
T  35465166 gtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgaggaatccccacctaacaccaaaagcaacatgacctaattctaataggcctaa 35465067  T
Q  171 aagactaaaacaaggggacagaaaatg 197  Q
    ||| |||||||||| ||||||||||||    
T  35465066 aaggctaaaacaagaggacagaaaatg 35465040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 35779373 - 35779499
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||  ||||||| | |||||||||||||| || ||||||||||||||||    
T  35779373 gtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaaccttcacctaacatcaaaagcaagaggaactaattctaataggcctaa 35779472  T
Q  171 aagactaaaacaaggggacagaaaatg 197  Q
    ||| |||||||||| || |||||||||    
T  35779473 aaggctaaaacaagagggcagaaaatg 35779499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 54 - 190
Target Start/End: Original strand, 34768607 - 34768741
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||| ||    
T  34768607 taaatataaggtgccg--tatatatgcggtacacccagaggtgaaaatgattaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 34768704  T
Q  154 gattctaataggcctaaaagactaaaacaaggggaca 190  Q
     |||||||||  |||||||| |||||||||| |||||    
T  34768705 aattctaataatcctaaaaggctaaaacaagaggaca 34768741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 10978959 - 10978833
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| || |||||||||  |||||    
T  10978959 gtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 10978860  T
Q  171 aagactaaaacaaggggacagaaaatg 197  Q
    ||| |||||||||| | ||||||||||    
T  10978859 aaggctaaaacaagagaacagaaaatg 10978833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 23509846 - 23509972
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||||| | |||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||| || |||||||||  |||||    
T  23509846 gtatatatgcggtacacctagaggtgaaaatgactaccgtagacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 23509945  T
Q  171 aagactaaaacaaggggacagaaaatg 197  Q
    ||| |||||||||| ||||||||||||    
T  23509946 aaggctaaaacaagaggacagaaaatg 23509972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 48209314 - 48209173
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| || ||    
T  48209314 taaatacaaggtgccg--tatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaaacccccacctaacaccaaaatcaagaagaact 48209217  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatg 197  Q
     |||||||||  |||| ||| |||||||||| ||||||||||||    
T  48209216 aattctaataatcctataaggctaaaacaagaggacagaaaatg 48209173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 38209624 - 38209742
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||    
T  38209624 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 38209721  T
Q  154 gattctaataggcctaaaaga 174  Q
     |||||||||  |||||||||    
T  38209722 aattctaataatcctaaaaga 38209742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 13460266 - 13460140
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||| ||||| | ||||||||||||||||||||||| || ||||||||||||| ||||||| |||||||| || |||||||||  |||||    
T  13460266 gtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 13460167  T
Q  171 aagactaaaacaaggggacagaaaatg 197  Q
    ||| ||||||||||  |||||||||||    
T  13460166 aaggctaaaacaagaagacagaaaatg 13460140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 94 - 197
Target Start/End: Original strand, 10428276 - 10428379
Alignment:
Q  94 gtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaagactaaaacaaggggacagaa 193  Q
    |||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||| || ||| |||||  |||||||| |||||||||| ||||||||    
T  10428276 gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatcaagaggaactaattataataatcctaaaaggctaaaacaagaggacagaa 10428375  T
Q  194 aatg 197  Q
    ||||    
T  10428376 aatg 10428379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 85 - 174
Target Start/End: Complemental strand, 55255314 - 55255225
Alignment:
Q  85 cacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaaga 174  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| || |||||||||  |||||||||    
T  55255314 cacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 55255225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 54780851 - 54780774
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaa 133  Q
    |||||| |||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  54780851 taaatacaaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaa 54780774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 5128875 - 5128960
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  ||||||||| || |||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||    
T  5128875 taaatacaaggtgccg--tatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 5128960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 1105591 - 1105521
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||||||| ||||||| | ||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  1105591 gtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaacccccacctaacaccaaaa 1105521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 32915459 - 32915374
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  ||||||||  ||||||||| |||| ||||||| ||||||||||||||| ||||||||||||| |||||||    
T  32915459 taaatacaaggtgccg--tatatatgtggtacacccagaggtaaaaatgattaccgtatacatgaggaacccccacctaacaccaaaa 32915374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 37514733 - 37514648
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| |||||||||  ||||||||| |||||| || |||||||||||||||||||||||||||  || |||||||||| |||||||    
T  37514733 taaatacaaggtgccg--tatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaagaatccccacctaacaccaaaa 37514648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 54779490 - 54779439
Alignment:
Q  271 gggagacccagctctgttgagctgtttgcaccccctcagggccgggcctggt 322  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||||||||||    
T  54779490 gggaggcccagctcggttgagctgtttgcactccctcagggccgggcctggt 54779439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 4167924 - 4167992
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||| |||||||||  |||||||||  ||||||||||||||||||| |||||| |||||||||| ||||    
T  4167924 taaatacaaggtgccg--tatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacc 4167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 35780573 - 35780622
Alignment:
Q  271 gggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
    ||||| |||||||| |||||||||||||||||||||| | ||||||||||    
T  35780573 gggaggcccagctcggttgagctgtttgcaccccctcggagccgggcctg 35780622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 36178652 - 36178607
Alignment:
Q  127 cacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||||    
T  36178652 cacctaacaccaaaagcaagaggacccgattctaatgggcctaaaa 36178607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 36118584 - 36118632
Alignment:
Q  126 ccacctaataccaaaagcaagaggacctgattctaataggcctaaaaga 174  Q
    |||||||| ||||||||||||| ||||  ||||||||||||||||||||    
T  36118584 ccacctaacaccaaaagcaagatgacccaattctaataggcctaaaaga 36118632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 37746842 - 37746894
Alignment:
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||| ||||||||| ||||||||||||| ||||  ||||||||||||||||||    
T  37746842 aaacgcccacctaacaccaaaagcaagatgacccaattctaataggcctaaaa 37746894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 10431456 - 10431499
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  10431456 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 10431499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 303
Target Start/End: Complemental strand, 35464001 - 35463958
Alignment:
Q  260 cccatgactgagggagacccagctctgttgagctgtttgcaccc 303  Q
    |||||| ||| ||||| |||||||||||||||||||||||||||    
T  35464001 cccatggctgggggaggcccagctctgttgagctgtttgcaccc 35463958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 55255132 - 55255089
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  55255132 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 55255089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 5128997 - 5129039
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcagg 310  Q
    |||||||| ||||||||  ||||||||||||||||||||||||    
T  5128997 tgagggaggcccagctcgtttgagctgtttgcaccccctcagg 5129039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 57
Target Start/End: Complemental strand, 24969535 - 24969505
Alignment:
Q  27 aaaaagcaatgatctatttatattttttaaa 57  Q
    |||||||||||||||||||||||||||||||    
T  24969535 aaaaagcaatgatctatttatattttttaaa 24969505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 29690950 - 29691000
Alignment:
Q  271 gggagacccagctctgttgagctgtttgcaccccctcagggccgggcctgg 321  Q
    ||||| ||||||||||| |||||||||||||| || ||||||||| |||||    
T  29690950 gggaggcccagctctgtagagctgtttgcacctccccagggccggccctgg 29691000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 25887301 - 25887350
Alignment:
Q  271 gggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
    ||||| ||||||||||| |||||||||||||| || ||||||||| ||||    
T  25887301 gggaggcccagctctgtagagctgtttgcacctccccagggccggccctg 25887350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 48694759 - 48694710
Alignment:
Q  271 gggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
    ||||| ||||||||||| |||||||||||||| || ||||||||| ||||    
T  48694759 gggaggcccagctctgtagagctgtttgcacctccccagggccggtcctg 48694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 2135447 - 2135491
Alignment:
Q  128 acctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||||| ||||||||||||||||||  ||||||||| ||||||||    
T  2135447 acctaacaccaaaagcaagaggacccaattctaataagcctaaaa 2135491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 27112088 - 27112036
Alignment:
Q  72 tatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||  |||||| ||| |||||||| ||||||||||||||||| ||||    
T  27112088 tatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 27112036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 315
Target Start/End: Original strand, 27596656 - 27596700
Alignment:
Q  271 gggagacccagctctgttgagctgtttgcaccccctcagggccgg 315  Q
    ||||| ||||||||  |||||||||| ||||||||||||||||||    
T  27596656 gggaggcccagctcgtttgagctgttcgcaccccctcagggccgg 27596700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 39329513 - 39329565
Alignment:
Q  120 aaacccccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||| ||||| ||| ||||||||||||| ||||  ||||||||||||||||||    
T  39329513 aaacacccacataacaccaaaagcaagaagaccaaattctaataggcctaaaa 39329565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 45560718 - 45560758
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctca 308  Q
    |||||||| ||||||||  ||||||||||||||||||||||    
T  45560718 tgagggaggcccagctcgtttgagctgtttgcaccccctca 45560758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 315
Target Start/End: Original strand, 45996907 - 45996951
Alignment:
Q  271 gggagacccagctctgttgagctgtttgcaccccctcagggccgg 315  Q
    |||||||||||||| || |||||||||||||||||  ||||||||    
T  45996907 gggagacccagctcggtagagctgtttgcacccccaaagggccgg 45996951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 112; Significance: 2e-56; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 54 - 204
Target Start/End: Complemental strand, 106607 - 106459
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacct 153  Q
    ||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  106607 taaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 106510  T
Q  154 gattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggg 204  Q
     | |||||||||||||||||||||||||||||||||| |||||||||||||    
T  106509 aaatctaataggcctaaaagactaaaacaaggggacataaaatggctgggg 106459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 106444 - 106378
Alignment:
Q  255 tgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctgg 321  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  106444 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccctctcagggccgggcctgg 106378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 1397 - 1271
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaagcaagaggacctgattctaataggcctaa 170  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| || ||| |||||  |||||    
T  1397 gtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattttaataatcctaa 1298  T
Q  171 aagactaaaacaaggggacagaaaatg 197  Q
    |||  ||||||||| ||||| ||||||    
T  1297 aaggttaaaacaagaggacaaaaaatg 1271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 1063 - 1020
Alignment:
Q  268 tgagggagacccagctctgttgagctgtttgcaccccctcaggg 311  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  1063 tgagggaggcccagctcgtttgagctgtttgcaccccctcaggg 1020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 181969 - 181903
Alignment:
Q  75 atatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaataccaaaa 141  Q
    |||||| ||||| ||| |||||||||||||||||||||||||||| |||||||| |||| |||||||    
T  181969 atatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaacccccatctaacaccaaaa 181903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 4214 - 4149
Alignment:
Q  255 tgagacccatgactgagggagacccagctctgttgagctgtttgcaccccctcagggccgggcctg 320  Q
    |||| ||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||| ||||    
T  4214 tgaggcccatgactggaggaggcccagctctgttgagctgtttgcaccctctcagggccggccctg 4149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 230986 - 231033
Alignment:
Q  125 cccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  230986 cccacctaacaccaaaagcaagaggacccgattctaataggcctaaaa 231033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 230908 - 230956
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 119  Q
    ||||||||||  || |||||||||||||||| |||||| ||||||||||    
T  230908 gtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgag 230956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 206538 - 206591
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||| |||||||||| ||||||||| ||||||||||||||||| ||||    
T  206538 gtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacc 206591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 307 - 354
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatga 118  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  307 gtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatga 354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 16081 - 16028
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||| ||||| ||||| |||||| ||||||| ||||||||||||||||||||||    
T  16081 gtatgtatgcggtacatccaaagatgaaaatcactaccgtatacatgagaaacc 16028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 1423 - 1355
Alignment:
Q  54 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    |||||||||||||| |  |||||||||  |||||||||| |||||||| |||| |||||||||||| ||||    
T  1423 taaatataaggtgctg--tatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 1355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 14422 - 14372
Alignment:
Q  271 gggagacccagctctgttgagctgtttgcaccccctcagggccgggcctgg 321  Q
    ||||| ||||||||||| |||||||||||||| || ||||||||| |||||    
T  14422 gggaggcccagctctgtagagctgtttgcacctccccagggccggccctgg 14372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 40058 - 40012
Alignment:
Q  126 ccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||||||| || |||||||||||||||  ||||||||||||||||||    
T  40058 ccacctaacacaaaaagcaagaggacccaattctaataggcctaaaa 40012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 138118 - 138072
Alignment:
Q  126 ccacctaataccaaaagcaagaggacctgattctaataggcctaaaa 172  Q
    |||||||| || |||||||||||||||  ||||||||||||||||||    
T  138118 ccacctaacacaaaaagcaagaggacccaattctaataggcctaaaa 138072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 173559 - 173612
Alignment:
Q  71 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 124  Q
    ||||||||||  ||||||||||||| ||||| |||||||||||| |||| ||||    
T  173559 gtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacc 173612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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