View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9783_low_33 (Length: 256)
Name: NF9783_low_33
Description: NF9783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9783_low_33 |
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Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 34701347 - 34701574
Alignment:
| Q |
19 |
acatatgataactaattgggatttgcgagattttagcgtaacgaaccataaatgggattcatgagagggaaccaatgtttgagttatatgatgttgttgc |
118 |
Q |
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| T |
34701347 |
acatatgataactaattgggatttgcgagattttagcgtaacgaaccataaatgggattcatgagagggaaccaatgtttgagttatatgatgttgttgc |
34701446 |
T |
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| Q |
119 |
ttaaacgcatttaacttctcattttgggtccctttccttcctcgtataccgaacaaatatctcactcacgtgctcgactactggcccatgtttttgagta |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34701447 |
ttaaacgcatttaacttctcattttgggtccctttccttcctcgtataccgaacaaatatctcactcacgtgctcgactactggcccatgtttttgagta |
34701546 |
T |
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| Q |
219 |
agtttcaagtcacctataacattctctg |
246 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
34701547 |
agtttcaagtcacctataacattctctg |
34701574 |
T |
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