View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9783_low_37 (Length: 250)
Name: NF9783_low_37
Description: NF9783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9783_low_37 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 29547040 - 29547284
Alignment:
| Q |
1 |
tagaattcataacataaagatagcgttattaatttcccgcgctcattgttacagtttattgcatgatcaagaaaattttctgtacnnnnnnnnttaccct |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |
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| T |
29547040 |
tagaattcataacataaagatagcgttattaatttcccgcgctcattgttacagtttattgcatgatcaagaaaattttctgtacaaaaaaaattacact |
29547139 |
T |
|
| Q |
101 |
gtataacattattaagaagaaagttctactgtggctaacaaatgcacattttagtcacctaagaatacacaacatatgtaatgacttgaatcttcttgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29547140 |
gtataacattattaagaagaaagttctactgtggctaacaaatgcacattttagtcacctaagaatacacaacatatgtaatgacttgaatcttcttgat |
29547239 |
T |
|
| Q |
201 |
ttctacatgtcactcagttctaattcctgtcctgtcctttgcttc |
245 |
Q |
| |
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||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
29547240 |
ttctacatgtcactcagttctaattcctgtcctgtccattgcttc |
29547284 |
T |
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