View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9786_high_1 (Length: 849)

Name: NF9786_high_1
Description: NF9786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9786_high_1
NF9786_high_1
[»] chr2 (54 HSPs)
chr2 (162-835)||(16243255-16243930)
chr2 (308-836)||(16423070-16423607)
chr2 (177-311)||(3055556-3055690)
chr2 (179-309)||(12337937-12338067)
chr2 (178-312)||(41478636-41478770)
chr2 (178-311)||(37990011-37990144)
chr2 (179-315)||(13197704-13197840)
chr2 (177-309)||(15896840-15896972)
chr2 (178-310)||(44398685-44398817)
chr2 (178-312)||(9047752-9047886)
chr2 (179-315)||(6648513-6648649)
chr2 (178-310)||(13344483-13344615)
chr2 (185-309)||(15372232-15372356)
chr2 (178-310)||(38917521-38917653)
chr2 (178-310)||(44397546-44397678)
chr2 (179-312)||(37666607-37666740)
chr2 (179-309)||(16044317-16044447)
chr2 (188-312)||(41492893-41493017)
chr2 (172-290)||(4683951-4684069)
chr2 (193-310)||(30099181-30099298)
chr2 (207-306)||(44804581-44804680)
chr2 (193-315)||(12170393-12170515)
chr2 (517-627)||(34111318-34111428)
chr2 (55-143)||(16244071-16244163)
chr2 (55-143)||(16422040-16422132)
chr2 (520-780)||(13494693-13494963)
chr2 (198-306)||(16734802-16734910)
chr2 (588-786)||(26538998-26539206)
chr2 (204-269)||(41453084-41453149)
chr2 (263-317)||(15372218-15372272)
chr2 (193-274)||(10069242-10069323)
chr2 (263-317)||(15896834-15896888)
chr2 (193-259)||(31150667-31150733)
chr2 (244-309)||(13724102-13724167)
chr2 (193-274)||(36688896-36688977)
chr2 (190-310)||(20900675-20900794)
chr2 (263-311)||(37990097-37990145)
chr2 (263-311)||(41478723-41478771)
chr2 (263-310)||(3055557-3055604)
chr2 (263-310)||(4684016-4684063)
chr2 (265-304)||(30099268-30099307)
chr2 (263-310)||(44397546-44397593)
chr2 (263-310)||(44398685-44398732)
chr2 (255-309)||(12170475-12170529)
chr2 (263-309)||(13197794-13197840)
chr2 (263-309)||(16044401-16044447)
chr2 (188-310)||(23227271-23227393)
chr2 (255-309)||(31150653-31150707)
chr2 (263-309)||(37666694-37666740)
chr2 (242-315)||(3243108-3243181)
chr2 (255-312)||(14740464-14740521)
chr2 (250-310)||(15271053-15271113)
chr2 (683-741)||(43287676-43287736)
chr2 (194-235)||(45294397-45294438)
[»] chr4 (65 HSPs)
chr4 (308-715)||(6585183-6585603)
chr4 (317-598)||(26653459-26653742)
chr4 (178-317)||(48336262-48336401)
chr4 (179-310)||(24704370-24704501)
chr4 (178-309)||(42797731-42797862)
chr4 (178-309)||(47833610-47833741)
chr4 (190-312)||(33621807-33621929)
chr4 (179-309)||(46797725-46797855)
chr4 (193-315)||(47838611-47838733)
chr4 (178-315)||(51894576-51894713)
chr4 (178-309)||(3372120-3372251)
chr4 (179-310)||(53337370-53337501)
chr4 (179-309)||(6121893-6122023)
chr4 (179-309)||(20538686-20538816)
chr4 (178-310)||(3992975-3993107)
chr4 (193-312)||(41469763-41469882)
chr4 (179-310)||(52756675-52756806)
chr4 (193-314)||(3422075-3422195)
chr4 (177-310)||(3904682-3904815)
chr4 (191-312)||(5986888-5987009)
chr4 (534-786)||(6407599-6407862)
chr4 (176-309)||(7579307-7579440)
chr4 (193-309)||(43900563-43900679)
chr4 (172-290)||(33551194-33551312)
chr4 (175-308)||(40913190-40913323)
chr4 (172-290)||(26231570-26231688)
chr4 (308-435)||(18899557-18899685)
chr4 (193-309)||(41615676-41615792)
chr4 (494-633)||(24858199-24858338)
chr4 (185-311)||(17344219-17344345)
chr4 (517-599)||(13753804-13753886)
chr4 (517-603)||(12429313-12429399)
chr4 (178-251)||(17236845-17236919)
chr4 (194-296)||(50430431-50430533)
chr4 (242-309)||(4780358-4780425)
chr4 (517-603)||(911277-911363)
chr4 (517-603)||(12435777-12435863)
chr4 (675-786)||(24858089-24858202)
chr4 (517-603)||(29333282-29333368)
chr4 (188-273)||(29845654-29845739)
chr4 (517-603)||(42410749-42410835)
chr4 (238-304)||(45478151-45478217)
chr4 (193-270)||(25855097-25855174)
chr4 (263-311)||(43900547-43900595)
chr4 (263-315)||(47833605-47833657)
chr4 (245-299)||(1716365-1716419)
chr4 (263-313)||(48336259-48336309)
chr4 (263-312)||(3372118-3372167)
chr4 (194-279)||(31013036-31013121)
chr4 (192-233)||(32822285-32822326)
chr4 (228-297)||(45725905-45725974)
chr4 (255-310)||(17236864-17236919)
chr4 (263-310)||(33551200-33551247)
chr4 (263-310)||(40913273-40913320)
chr4 (263-310)||(47838701-47838748)
chr4 (242-311)||(6422530-6422600)
chr4 (263-309)||(20538770-20538816)
chr4 (263-309)||(24704370-24704416)
chr4 (264-310)||(26231576-26231622)
chr4 (263-313)||(51894666-51894716)
chr4 (263-309)||(53337370-53337416)
chr4 (263-312)||(3992973-3993022)
chr4 (188-269)||(6924724-6924804)
chr4 (253-310)||(17344212-17344269)
chr4 (263-312)||(42797729-42797778)
[»] chr3 (62 HSPs)
chr3 (308-785)||(10936728-10937216)
chr3 (174-310)||(49823380-49823516)
chr3 (175-309)||(19557052-19557186)
chr3 (179-311)||(10297979-10298111)
chr3 (178-309)||(2787832-2787963)
chr3 (178-309)||(21295326-21295457)
chr3 (193-314)||(8817381-8817502)
chr3 (178-311)||(40690994-40691127)
chr3 (193-310)||(46208044-46208161)
chr3 (178-310)||(4238593-4238725)
chr3 (178-310)||(8437424-8437556)
chr3 (178-310)||(22721930-22722062)
chr3 (178-309)||(34080030-34080161)
chr3 (178-309)||(38964391-38964522)
chr3 (193-311)||(17653726-17653844)
chr3 (179-309)||(48340397-48340527)
chr3 (193-310)||(37508935-37509052)
chr3 (194-310)||(51406688-51406804)
chr3 (178-309)||(44785396-44785527)
chr3 (193-306)||(9111497-9111610)
chr3 (178-306)||(42507358-42507486)
chr3 (185-315)||(6013330-6013460)
chr3 (193-315)||(35513487-35513609)
chr3 (193-311)||(36095678-36095796)
chr3 (194-297)||(42170358-42170461)
chr3 (193-315)||(33942926-33943048)
chr3 (517-640)||(39875440-39875563)
chr3 (185-311)||(26019478-26019603)
chr3 (520-630)||(21587491-21587601)
chr3 (175-234)||(33128202-33128261)
chr3 (517-603)||(2978666-2978752)
chr3 (263-317)||(4238586-4238640)
chr3 (517-603)||(21477150-21477236)
chr3 (244-309)||(34988140-34988205)
chr3 (193-309)||(9213530-9213646)
chr3 (263-319)||(21295410-21295466)
chr3 (253-311)||(9213514-9213572)
chr3 (193-264)||(43323074-43323145)
chr3 (263-310)||(46208029-46208076)
chr3 (263-309)||(17653712-17653758)
chr3 (263-313)||(22721927-22721977)
chr3 (263-309)||(37508921-37508967)
chr3 (210-292)||(49687902-49687984)
chr3 (263-316)||(2787916-2787969)
chr3 (244-309)||(5323272-5323337)
chr3 (254-311)||(9027140-9027197)
chr3 (263-312)||(34080114-34080163)
chr3 (247-312)||(34381464-34381529)
chr3 (194-273)||(29285796-29285873)
chr3 (263-315)||(38964386-38964438)
chr3 (263-311)||(44785480-44785528)
chr3 (263-310)||(19557136-19557183)
chr3 (255-310)||(33943008-33943063)
chr3 (263-310)||(36095764-36095811)
chr3 (263-310)||(49823465-49823512)
chr3 (263-309)||(10297979-10298025)
chr3 (263-309)||(35513473-35513519)
chr3 (250-312)||(45652066-45652128)
chr3 (193-274)||(8092602-8092683)
chr3 (263-312)||(8437422-8437471)
chr3 (263-312)||(42170430-42170479)
chr3 (263-312)||(42507439-42507488)
[»] chr7 (49 HSPs)
chr7 (308-640)||(26248736-26249068)
chr7 (178-315)||(7240748-7240885)
chr7 (179-309)||(94318-94448)
chr7 (178-312)||(1738444-1738578)
chr7 (177-315)||(7482223-7482361)
chr7 (179-312)||(36583395-36583528)
chr7 (175-312)||(38063910-38064047)
chr7 (178-309)||(46840859-46840990)
chr7 (193-310)||(9268770-9268887)
chr7 (179-309)||(23314139-23314269)
chr7 (179-309)||(31319399-31319529)
chr7 (178-310)||(1565728-1565860)
chr7 (193-309)||(22285713-22285829)
chr7 (178-318)||(28536742-28536882)
chr7 (178-310)||(4790247-4790379)
chr7 (179-309)||(38441460-38441590)
chr7 (496-780)||(28106362-28106656)
chr7 (193-297)||(36016208-36016312)
chr7 (195-303)||(33418392-33418500)
chr7 (521-782)||(14997678-14997947)
chr7 (308-510)||(8049581-8049786)
chr7 (550-786)||(20362330-20362576)
chr7 (380-715)||(42129001-42129343)
chr7 (193-309)||(9575423-9575539)
chr7 (179-302)||(40840126-40840249)
chr7 (517-630)||(14719687-14719800)
chr7 (534-677)||(8049318-8049465)
chr7 (193-310)||(7661075-7661192)
chr7 (194-302)||(7269412-7269520)
chr7 (517-603)||(29185167-29185253)
chr7 (263-313)||(22285695-22285745)
chr7 (517-603)||(25830818-25830904)
chr7 (263-314)||(1738531-1738582)
chr7 (281-316)||(3411453-3411488)
chr7 (263-313)||(7240745-7240795)
chr7 (263-309)||(36016280-36016326)
chr7 (263-309)||(38441460-38441506)
chr7 (263-311)||(1565813-1565861)
chr7 (263-315)||(7482219-7482271)
chr7 (250-310)||(7661147-7661207)
chr7 (263-311)||(46840858-46840906)
chr7 (263-310)||(28536835-28536882)
chr7 (263-318)||(36583386-36583441)
chr7 (263-310)||(38063997-38064044)
chr7 (263-313)||(9268752-9268802)
chr7 (263-309)||(23314223-23314269)
chr7 (263-309)||(31319483-31319529)
chr7 (240-294)||(36033241-36033295)
chr7 (800-837)||(34326292-34326329)
[»] chr1 (58 HSPs)
chr1 (312-540)||(27317057-27317287)
chr1 (178-312)||(14984836-14984970)
chr1 (175-315)||(9981643-9981783)
chr1 (179-303)||(44955212-44955336)
chr1 (178-309)||(27159358-27159489)
chr1 (178-309)||(44668093-44668224)
chr1 (178-312)||(12483625-12483759)
chr1 (179-309)||(31842795-31842925)
chr1 (179-309)||(39401966-39402096)
chr1 (168-309)||(11795922-11796063)
chr1 (178-309)||(26471065-26471196)
chr1 (179-310)||(47216698-47216829)
chr1 (177-311)||(34042694-34042828)
chr1 (179-316)||(1050888-1051025)
chr1 (193-309)||(47777481-47777597)
chr1 (483-640)||(27417843-27418000)
chr1 (193-310)||(25694333-25694450)
chr1 (179-315)||(47969694-47969831)
chr1 (194-312)||(47588334-47588452)
chr1 (179-289)||(23278021-23278131)
chr1 (193-310)||(17556766-17556884)
chr1 (193-311)||(11897068-11897186)
chr1 (176-297)||(12213486-12213607)
chr1 (321-420)||(27418035-27418135)
chr1 (194-309)||(11989796-11989911)
chr1 (193-310)||(37552155-37552272)
chr1 (193-309)||(16448108-16448224)
chr1 (253-316)||(11897047-11897110)
chr1 (213-309)||(571542-571637)
chr1 (517-603)||(28518916-28519002)
chr1 (517-603)||(38990742-38990828)
chr1 (193-302)||(12043618-12043726)
chr1 (253-310)||(16448182-16448239)
chr1 (556-639)||(27317287-27317373)
chr1 (228-311)||(1598380-1598461)
chr1 (193-312)||(12483642-12483761)
chr1 (194-309)||(40676804-40676919)
chr1 (258-312)||(5392144-5392198)
chr1 (253-311)||(21537943-21538001)
chr1 (263-313)||(27159442-27159492)
chr1 (263-313)||(44668177-44668227)
chr1 (210-271)||(11774544-11774605)
chr1 (263-312)||(26471149-26471198)
chr1 (263-311)||(11795931-11795979)
chr1 (214-310)||(30800460-30800556)
chr1 (244-315)||(5392211-5392282)
chr1 (263-310)||(9981646-9981693)
chr1 (200-271)||(31748352-31748423)
chr1 (263-309)||(1050888-1050934)
chr1 (263-313)||(25694315-25694365)
chr1 (263-309)||(31842879-31842925)
chr1 (263-309)||(39402050-39402096)
chr1 (263-309)||(47216783-47216829)
chr1 (255-300)||(12043613-12043658)
chr1 (683-741)||(16168578-16168638)
chr1 (683-741)||(18535266-18535326)
chr1 (265-310)||(34042695-34042740)
chr1 (255-304)||(38791239-38791287)
[»] chr5 (44 HSPs)
chr5 (193-319)||(13033065-13033191)
chr5 (179-316)||(9395350-9395487)
chr5 (193-319)||(13103038-13103164)
chr5 (193-316)||(36563531-36563654)
chr5 (178-311)||(41989405-41989538)
chr5 (178-310)||(17025623-17025755)
chr5 (178-309)||(37148955-37149086)
chr5 (193-310)||(11795182-11795299)
chr5 (193-309)||(23359956-23360072)
chr5 (193-306)||(4443974-4444087)
chr5 (193-318)||(26350341-26350466)
chr5 (178-309)||(582988-583118)
chr5 (178-309)||(20848073-20848203)
chr5 (178-310)||(37641952-37642085)
chr5 (206-310)||(21575973-21576077)
chr5 (200-309)||(6126845-6126954)
chr5 (517-677)||(18772963-18773128)
chr5 (517-630)||(17604391-17604504)
chr5 (193-257)||(38361743-38361807)
chr5 (190-303)||(3549553-3549666)
chr5 (193-267)||(13539909-13539979)
chr5 (242-306)||(9006885-9006949)
chr5 (517-613)||(25366088-25366184)
chr5 (227-294)||(36595789-36595856)
chr5 (263-318)||(37149039-37149094)
chr5 (263-309)||(26350434-26350480)
chr5 (263-311)||(36563622-36563670)
chr5 (228-302)||(2366345-2366419)
chr5 (196-274)||(2629579-2629657)
chr5 (263-309)||(11795168-11795214)
chr5 (215-312)||(966184-966281)
chr5 (263-315)||(582983-583035)
chr5 (263-315)||(9395344-9395396)
chr5 (263-310)||(13033050-13033097)
chr5 (263-310)||(13103023-13103070)
chr5 (688-784)||(22231066-22231164)
chr5 (255-302)||(27081016-27081063)
chr5 (265-316)||(37641946-37641997)
chr5 (256-318)||(35584450-35584512)
chr5 (186-223)||(18167405-18167442)
chr5 (683-741)||(19780299-19780359)
chr5 (263-312)||(20848071-20848120)
chr5 (228-312)||(35904448-35904530)
chr5 (212-273)||(39290807-39290868)
[»] scaffold0204 (2 HSPs)
scaffold0204 (178-317)||(23784-23923)
scaffold0204 (263-313)||(23781-23831)
[»] chr8 (56 HSPs)
chr8 (178-312)||(7785775-7785909)
chr8 (177-310)||(43199353-43199486)
chr8 (178-310)||(54611-54743)
chr8 (178-310)||(2890161-2890293)
chr8 (179-309)||(6552655-6552785)
chr8 (178-312)||(7805696-7805830)
chr8 (179-313)||(44498183-44498317)
chr8 (179-311)||(39571201-39571333)
chr8 (179-309)||(3304278-3304408)
chr8 (176-310)||(25600999-25601133)
chr8 (194-311)||(12763652-12763769)
chr8 (178-311)||(32211361-32211494)
chr8 (179-303)||(12343146-12343270)
chr8 (179-311)||(32114473-32114605)
chr8 (178-309)||(33289261-33289392)
chr8 (177-294)||(13578855-13578972)
chr8 (179-316)||(15888345-15888482)
chr8 (193-309)||(31654627-31654743)
chr8 (179-311)||(7012171-7012303)
chr8 (193-310)||(8587184-8587301)
chr8 (517-602)||(12146304-12146389)
chr8 (228-317)||(27422239-27422328)
chr8 (193-310)||(28463625-28463742)
chr8 (193-302)||(24691986-24692094)
chr8 (178-241)||(4245649-4245712)
chr8 (193-294)||(17006925-17007026)
chr8 (193-294)||(17570221-17570322)
chr8 (253-311)||(24692052-24692110)
chr8 (517-603)||(27680055-27680141)
chr8 (517-603)||(37209352-37209438)
chr8 (263-316)||(54696-54749)
chr8 (255-316)||(8587163-8587224)
chr8 (185-309)||(15888358-15888482)
chr8 (194-294)||(28999063-28999163)
chr8 (256-308)||(30171483-30171535)
chr8 (263-310)||(25601084-25601131)
chr8 (517-603)||(21247318-21247404)
chr8 (263-309)||(31654613-31654659)
chr8 (263-317)||(43199438-43199492)
chr8 (263-312)||(2890246-2890295)
chr8 (263-316)||(4245665-4245718)
chr8 (253-306)||(17006914-17006967)
chr8 (253-306)||(17570280-17570333)
chr8 (263-311)||(7785862-7785910)
chr8 (263-311)||(7805783-7805831)
chr8 (242-293)||(35564706-35564757)
chr8 (263-309)||(3304362-3304408)
chr8 (263-309)||(6552655-6552701)
chr8 (263-309)||(12343224-12343270)
chr8 (263-309)||(32114559-32114605)
chr8 (240-310)||(33057655-33057725)
chr8 (263-309)||(44498271-44498317)
chr8 (255-304)||(28463616-28463665)
chr8 (683-741)||(30714503-30714563)
chr8 (683-741)||(30722280-30722340)
chr8 (265-310)||(32211449-32211494)
[»] chr6 (39 HSPs)
chr6 (176-309)||(2830332-2830465)
chr6 (177-310)||(11572144-11572277)
chr6 (179-312)||(26602323-26602456)
chr6 (179-310)||(6330115-6330246)
chr6 (178-309)||(8382969-8383100)
chr6 (177-311)||(8099528-8099662)
chr6 (193-310)||(13853592-13853709)
chr6 (177-310)||(35031000-35031133)
chr6 (178-310)||(6068565-6068697)
chr6 (178-311)||(33052792-33052925)
chr6 (179-311)||(9644696-9644828)
chr6 (179-311)||(9650713-9650845)
chr6 (194-309)||(8417793-8417908)
chr6 (193-316)||(6143568-6143691)
chr6 (195-310)||(28747133-28747248)
chr6 (179-271)||(13043758-13043850)
chr6 (209-309)||(17992018-17992118)
chr6 (230-310)||(22896513-22896593)
chr6 (237-310)||(3788095-3788168)
chr6 (193-311)||(6068936-6069056)
chr6 (238-309)||(7596977-7597048)
chr6 (517-603)||(23427124-23427210)
chr6 (193-310)||(14936456-14936573)
chr6 (198-294)||(6549902-6549997)
chr6 (263-310)||(6143553-6143600)
chr6 (263-312)||(8383053-8383102)
chr6 (254-310)||(7597052-7597108)
chr6 (263-315)||(13853677-13853729)
chr6 (263-311)||(33052878-33052926)
chr6 (263-310)||(2830334-2830381)
chr6 (194-237)||(3788109-3788152)
chr6 (263-310)||(8099529-8099576)
chr6 (263-314)||(8417877-8417928)
chr6 (263-310)||(11572229-11572276)
chr6 (263-309)||(6330115-6330161)
chr6 (263-309)||(26602323-26602369)
chr6 (255-309)||(32045157-32045211)
chr6 (268-309)||(22896471-22896512)
chr6 (281-318)||(24949621-24949658)
[»] scaffold0482 (2 HSPs)
scaffold0482 (178-312)||(12859-12993)
scaffold0482 (263-311)||(12858-12906)
[»] scaffold0464 (2 HSPs)
scaffold0464 (179-315)||(6125-6261)
scaffold0464 (263-309)||(6215-6261)
[»] scaffold0009 (2 HSPs)
scaffold0009 (178-309)||(49504-49635)
scaffold0009 (263-311)||(49503-49551)
[»] scaffold1707 (1 HSPs)
scaffold1707 (193-297)||(1349-1453)
[»] scaffold0011 (1 HSPs)
scaffold0011 (197-311)||(231301-231415)
[»] scaffold0081 (1 HSPs)
scaffold0081 (690-786)||(7594-7692)
[»] scaffold0650 (1 HSPs)
scaffold0650 (176-274)||(20-117)
[»] scaffold0415 (1 HSPs)
scaffold0415 (188-273)||(13761-13847)
[»] scaffold0017 (1 HSPs)
scaffold0017 (217-279)||(30037-30099)
[»] scaffold0014 (1 HSPs)
scaffold0014 (683-741)||(111687-111747)


Alignment Details
Target: chr2 (Bit Score: 560; Significance: 0; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 560; E-Value: 0
Query Start/End: Original strand, 162 - 835
Target Start/End: Complemental strand, 16243930 - 16243255
Alignment:
Q  162 gtaccctgataactatatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatc 261  Q
    |||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16243930 gtactctgataactatatactatctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 16243831  T
Q  262 aacttttgttgacataaaattctcttataaataggatcggagggagtattatttattactttgatatattagaaatgtaggttatttgtgtgatgctcat 361  Q
    |||||||||||||  ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16243830 aacttttgttgacccaaaattctcttataaataggaccggatggagtattatttattactttgatatattagaaatgtaggttatttgtgtgatgctcat 16243731  T
Q  362 atgaaattttagcactacataaagaaagtcgagaatgtgtttagttgaggtcaatgattgaacacatagaagaaacatgcaattgtcttctgaaatagtg 461  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16243730 atgaaattttagcactacataaagaaagtcgagaatgtgtttggttgaggtcaatgattgaacacatagaagaaacatgcaattgtcttccgaaatagtg 16243631  T
Q  462 aatgaaacaaacctttataacatgataccaggtgcattgctcagttgaaggaaggtgatcttcagaagaatgatgatataagctttcaacaaatttgttc 561  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16243630 aatgaaacaaacatttataacatgatgccaggtgcattgctcagttgaaggaaggtgatcttcagaagaatgatgatataagctttcaacaaatttgttc 16243531  T
Q  562 gtgttataatcttgctgaccttttcacaaagtcactcccaagcataattttttaacaaccgatacaaaatattgatcttgtctcggagatgattatttga 661  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  16243530 gtgttataatcttgccgaccttttcacaaagtcactcccaagcataattttttaacaaccgatacaaaatattaatcttgtctcgtagatgattatttga 16243431  T
Q  662 ttgagggggagatatatagtttgcactctttttcccttca--ctggttttgtcccattgaatttttgtggtaaagtttttaatgagatagatatactgga 759  Q
    |||||||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  16243430 ttgagggggagatatatagtttgcactctttttctcttcatcatggttttgtcccattgaatttttctggtaaagtttttaatgagatagatataccgga 16243331  T
Q  760 tattgtactctttttccttcactaagannnnnnncaaaagggagtgttatgaatatataaattaatggatgtccat 835  Q
    |||||||||||||||||||| ||||||       ||| ||||||||||||||||||||||||||||||||||||||    
T  16243330 tattgtactctttttccttcgctaagatttttttcaagagggagtgttatgaatatataaattaatggatgtccat 16243255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 308 - 836
Target Start/End: Original strand, 16423070 - 16423607
Alignment:
Q  308 tattatttattactttgatatattagaaatgtaggttatttgtgtgatgctcatatgaaattttagcactacataaagaaagtcgagaatgtgtttagtt 407  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||    
T  16423070 tattatttattactttgttatattagaaatgcaggttatttgtgtgatgctcatatgaaattttaacactacataaagaaagtcaagaatgtgtttggtt 16423169  T
Q  408 gaggtcaatgattgaacacatagaagaaacatgcaattgtcttctgaaatagtgaatgaaacaaacctttataacatgataccaggtgcattgctcagtt 507  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16423170 gaggtcaatgattgaacacatagaagaaacatgcaattgtcttccgaaatagtgaatgaaacaaacctttataacatgataccaggtgcattgcttagtt 16423269  T
Q  508 gaaggaaggtgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaagcata 607  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  16423270 gaaggaaggtgatcttcagaagaatgatgatataagccgtcaacaaatttgttcatgttataatcttgcagaccttttcacaaagtcactcccaagcata 16423369  T
Q  608 attttttaacaaccgatacaaaatattgatctt----gtctcggagatgattatttgattgagggggagat----atatagtttgcactctttttccctt 699  Q
    |||||||||||||| ||||||||||||||||||    || |||| ||||||| ||||||||||||||||||    ||||||||||||| |||||| ||||    
T  16423370 attttttaacaacc-atacaaaatattgatcttaatcgtgtcggggatgattgtttgattgagggggagatataaatatagtttgcacccttttttcctt 16423468  T
Q  700 cac--tggttttgtcccattgaatttttgtggtaaagtttttaatgagatagatatactggatattgtactctttttccttcactaagannnnnnncaaa 797  Q
    |||  |||||||| | || ||  ||||| | ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||       |||     
T  16423469 caccatggttttgcctcactgggtttttctagtaaagtttgtaatgagatagatataccggatattgtactctttttccttcgctaagatttttttcaag 16423568  T
Q  798 agggagtgttatgaatatataaattaatggatgtccatc 836  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  16423569 agggagtgttatgaatatataaactattggatgtccatc 16423607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 177 - 311
Target Start/End: Original strand, 3055556 - 3055690
Alignment:
Q  177 tatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacat 276  Q
    ||||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||      
T  3055556 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 3055655  T
Q  277 aaaattctcttataaataggatcggagggagtatt 311  Q
    ||||||||||||||||||||| |||||||||||||    
T  3055656 aaaattctcttataaataggaccggagggagtatt 3055690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 179 - 309
Target Start/End: Complemental strand, 12338067 - 12337937
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  12338067 tactacctccggttctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 12337968  T
Q  279 aattctcttataaataggatcggagggagta 309  Q
    ||||||||||||||||||| |||||||||||    
T  12337967 aattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 178 - 312
Target Start/End: Complemental strand, 41478770 - 41478636
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  41478770 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 41478671  T
Q  278 aaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||||||||||| ||||||||||||||    
T  41478670 aaattctcttataaataggaccggagggagtatta 41478636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 178 - 311
Target Start/End: Complemental strand, 37990144 - 37990011
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  37990144 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 37990045  T
Q  278 aaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||||||||||| |||||||||||||    
T  37990044 aaattctcttataaataggaccggagggagtatt 37990011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 179 - 315
Target Start/End: Complemental strand, 13197840 - 13197704
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  13197840 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 13197741  T
Q  279 aattctcttataaataggatcggagggagtattattt 315  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  13197740 aattctcttataaataggaccggagggagtagtattt 13197704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 177 - 309
Target Start/End: Original strand, 15896840 - 15896972
Alignment:
Q  177 tatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacat 276  Q
    ||||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||      
T  15896840 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 15896939  T
Q  277 aaaattctcttataaataggatcggagggagta 309  Q
    ||||||||||||||||||||| |||||||||||    
T  15896940 aaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 178 - 310
Target Start/End: Original strand, 44398685 - 44398817
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  44398685 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 44398784  T
Q  278 aaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||||| ||||||||||||    
T  44398785 aaattctcttataaataggaccggagggagtat 44398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 178 - 312
Target Start/End: Complemental strand, 9047886 - 9047752
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    ||||||||||| ||  ||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  9047886 atactatctccggtcatatttataagagaaatttaggtcaaaaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 9047787  T
Q  278 aaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||||||||||| ||||||||||||||    
T  9047786 aaattctcttataaataggaccggagggagtatta 9047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 179 - 315
Target Start/End: Complemental strand, 6648649 - 6648513
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| ||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  6648649 tactacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 6648550  T
Q  279 aattctcttataaataggatcggagggagtattattt 315  Q
    ||||||||||||||||||| |||||||||||||||||    
T  6648549 aattctcttataaataggaccggagggagtattattt 6648513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 178 - 310
Target Start/End: Original strand, 13344483 - 13344615
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||   |    
T  13344483 atactacctccggttctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgatcca 13344582  T
Q  278 aaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||||| ||||||||||||    
T  13344583 aaattctcttataaataggaccggagggagtat 13344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 185 - 309
Target Start/End: Original strand, 15372232 - 15372356
Alignment:
Q  185 ctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattct 284  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  ||||||||    
T  15372232 ctccagtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacgagatacatcaacttttgttgacccaaaattct 15372331  T
Q  285 cttataaataggatcggagggagta 309  Q
    ||||||||||||| |||||||||||    
T  15372332 cttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 178 - 310
Target Start/End: Complemental strand, 38917653 - 38917521
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  38917653 atactacctccggtcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 38917554  T
Q  278 aaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||||| ||||||||||||    
T  38917553 aaattctcttataaataggaccggagggagtat 38917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 178 - 310
Target Start/End: Original strand, 44397546 - 44397678
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  44397546 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 44397645  T
Q  278 aaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||||| ||| ||||||||    
T  44397646 aaattctcttataaataggaccggggggagtat 44397678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 179 - 312
Target Start/End: Complemental strand, 37666740 - 37666607
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||  ||    
T  37666740 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaa 37666641  T
Q  279 aattctcttataaataggatcggagggagtatta 312  Q
    ||||||||||||||||||| ||||||||||||||    
T  37666640 aattctcttataaataggaccggagggagtatta 37666607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 179 - 309
Target Start/End: Complemental strand, 16044447 - 16044317
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||  ||    
T  16044447 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaa 16044348  T
Q  279 aattctcttataaataggatcggagggagta 309  Q
    ||||||||||||||||||| |||||||||||    
T  16044347 aattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 41493017 - 41492893
Alignment:
Q  188 cagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctctt 287  Q
    |||| |||||||||| | |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  ||| |||||||    
T  41493017 cagtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaaatttctctt 41492918  T
Q  288 ataaataggatcggagggagtatta 312  Q
    |||||||||| ||||||||||||||    
T  41492917 ataaataggaccggagggagtatta 41492893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 172 - 290
Target Start/End: Complemental strand, 4684069 - 4683951
Alignment:
Q  172 aactatatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgtt 271  Q
    |||||||||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  4684069 aactatatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgta 4683970  T
Q  272 gacataaaattctcttata 290  Q
     ||  ||||||||||||||    
T  4683969 aaccgaaaattctcttata 4683951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 193 - 310
Target Start/End: Complemental strand, 30099298 - 30099181
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||  |||||||||| |||||    
T  30099298 ctatttataagagaaatttaggtcaacaaaaatgaatgtatttggattgaatttttaattagatacatcaacttttgttgacccaaaattctctaataaa 30099199  T
Q  293 taggatcggagggagtat 310  Q
    ||||| ||||||||||||    
T  30099198 taggaccggagggagtat 30099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 207 - 306
Target Start/End: Complemental strand, 44804680 - 44804581
Alignment:
Q  207 aatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggaggga 306  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||    
T  44804680 aatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttaacttaaaattctcttataaataggaccggaggga 44804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 193 - 315
Target Start/End: Complemental strand, 12170515 - 12170393
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    ||||||| |||| ||| ||||||||| |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||  ||  ||||||||||||    
T  12170515 ctatttacaagagaaaattaggtcaataaaagttaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaagtttctcttataaa 12170416  T
Q  293 taggatcggagggagtattattt 315  Q
    || ||||||| | ||||||||||    
T  12170415 taagatcggatgaagtattattt 12170393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 517 - 627
Target Start/End: Complemental strand, 34111428 - 34111318
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaagcataattttttaa 616  Q
    ||||||||||||||||| |||||||||| ||||||||||| |||| ||| |||||||||| || ||||||||||||||||||||||||| | ||||| ||    
T  34111428 tgatcttcagaagaatggtgatataagcattcaacaaattcgttcttgtgataatcttgcagatcttttcacaaagtcactcccaagcagagtttttgaa 34111329  T
Q  617 caaccgataca 627  Q
    |||| ||||||    
T  34111328 caactgataca 34111318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 16244163 - 16244071
Alignment:
Q  55 cgtggtttttgggctaatagttt----acacctctactgatttacattttcttatatcacaccctctatgttatgtttctggtgcatcgtctg 143  Q
    |||||||||||||||||||||||    |||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  16244163 cgtggtttttgggctaatagtttgtttacacatctactaatttacattttcttatatcacaccctctatgttatgtttctgttgcatcatctg 16244071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 16422040 - 16422132
Alignment:
Q  55 cgtggtttttgggctaatagttt----acacctctactgatttacattttcttatatcacaccctctatgttatgtttctggtgcatcgtctg 143  Q
    |||||||||||||||||||||||    |||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  16422040 cgtggtttttgggctaatagtttgtttacacatctactaatttacattttcttatatcacaccctctatgttatgtttctgttgcatcatctg 16422132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 520 - 780
Target Start/End: Original strand, 13494693 - 13494963
Alignment:
Q  520 tcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaagcataattttttaacaa 619  Q
    |||||||||||| |||||||||     ||||||||||| ||||||| |||||||||  ||| |||||| |||||||||||||||||| | |||| |||||    
T  13494693 tcttcagaagaacgatgatatacataatcaacaaattttttcgtgtgataatcttgtagacgttttcataaagtcactcccaagcatgaattttgaacaa 13494792  T
Q  620 ccgatacaaaatattgatctt----gtctcggagatgattatttgattgagggggagat----atatagtttgcactctttttcccttcac--tggtttt 709  Q
    |  |||||||| |||||||||     ||| |||||||||| ||||  ||| || |||||    ||||| | |||||||| |||  ||||||  |||||||    
T  13494793 ctaatacaaaaaattgatcttcatcatcttggagatgattgtttggatgaaggagagatataaatatattctgcactctatttttcttcaccatggtttt 13494892  T
Q  710 gtcccattgaatttttgtggtaaagtttttaatgagatagatatactggatattgtactctttttccttca 780  Q
    || ||| |||  |||  ||||||  |||||||||||| | ||||| | |||||||||||||||||||||||    
T  13494893 gttccactgaggtttcctggtaatatttttaatgagacaaatatattagatattgtactctttttccttca 13494963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 198 - 306
Target Start/End: Original strand, 16734802 - 16734910
Alignment:
Q  198 tataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaatagga 297  Q
    ||||||| ||| || |||||||||||||  |||||| | ||||||||||||||| | ||||||||||||||||| ||  ||  |||||||||||||||||    
T  16734802 tataagagaaagtttggtcaacaaaagttgatgtatctggactgaatttttaaccaaatacatcaacttttgtttactcaactttctcttataaatagga 16734901  T
Q  298 tcggaggga 306  Q
      |||||||    
T  16734902 ctggaggga 16734910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 588 - 786
Target Start/End: Complemental strand, 26539206 - 26538998
Alignment:
Q  588 caaagtcactcccaagcataattttttaacaaccgatacaaaatattgatctt----gtctcggagatgattatttgattgagggggagatata----ta 679  Q
    ||||||||||  || ||||||||||| |||||| ||| ||||| |||||||||    |||||  |||||||| ||||  ||||| |||||||||    ||    
T  26539206 caaagtcactttcaggcataatttttgaacaactgattcaaaagattgatcttcattgtctcaaagatgattgtttggatgaggaggagatataaatata 26539107  T
Q  680 gtttgcactctttttcccttcac--tggttttgtcccattgaatttttgtggtaaagtttttaatgagatagatatactggatattgtactctttttcct 777  Q
      ||||||| |||||||||||||  |||||||||  || ||  ||||  | |||| |||||||| |||| | ||||| ||||||||||||||||||||||    
T  26539106 tcttgcactatttttcccttcaccatggttttgtatcagtgggttttcctagtaaggtttttaacgagacatatatattggatattgtactctttttcct 26539007  T
Q  778 tcactaaga 786  Q
    | |||||||    
T  26539006 tgactaaga 26538998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 41453084 - 41453149
Alignment:
Q  204 aaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttg 269  Q
    ||||| ||||||||| |||||| ||||||||| ||||||||||||||| | |||||||||||||||    
T  41453084 aaaaagttaggtcaataaaagttaatgtatttggactgaatttttaacaaaatacatcaacttttg 41453149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 15372272 - 15372218
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattatttat 317  Q
    |||||||||||| |||| |||||||||||||||||  ||||||||||||||||||    
T  15372272 acttttgttgacctaaatttctcttataaataggactggagggagtattatttat 15372218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 193 - 274
Target Start/End: Complemental strand, 10069323 - 10069242
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgac 274  Q
    |||||| ||||||| |||||||||||||||||| ||||||| ||| |  | |||||||| |||||||| ||||||| |||||    
T  10069323 ctatttttaagaaatatttaggtcaacaaaagttaatgtatctagtccaattttttaaccagatacataaacttttattgac 10069242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 15896888 - 15896834
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattatttat 317  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||| ||||||    
T  15896888 acttttgttgacctaaatttctcttataaataggaccggaggtagtataatttat 15896834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 31150667 - 31150733
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagataca 259  Q
    |||||||||||| ||| ||  ||||||||||||  |||||||| |||| ||||||||||||||||||    
T  31150667 ctatttataagagaaagttgcgtcaacaaaagtttatgtatttggactaaatttttaactagataca 31150733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 13724167 - 13724102
Alignment:
Q  244 tttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||| | |||||||||||||||||||| || |  |||||| ||||||||| |||||||||||    
T  13724167 tttttaaccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 36688896 - 36688977
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgac 274  Q
    |||||||||||| ||| || |||||||||| ||  |||||| | | ||||||||| ||| ||||||||||| ||||||||||    
T  36688896 ctatttataagagaaagtttggtcaacaaacgttgatgtatcttgtctgaattttaaacaagatacatcaatttttgttgac 36688977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 310
Target Start/End: Original strand, 20900675 - 20900794
Alignment:
Q  190 gttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttat 289  Q
    ||||||||||||||| | |||| ||||| |||||||  |||||| | | |  |||||| ||| |||||| |||| |||||||||| |||   |||||| |    
T  20900675 gttctatttataagagacatttgggtcagcaaaagttgatgtatcttgtccaaattttgaaccagatacgtcaatttttgttgacctaactatctcttgt 20900774  T
Q  290 aaataggatcggagggagtat 310  Q
    |||||||| ||||||||||||    
T  20900775 aaatagga-cggagggagtat 20900794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 37990097 - 37990145
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  37990097 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 41478723 - 41478771
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  41478723 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 41478771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 3055604 - 3055557
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  3055604 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 3055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 4684016 - 4684063
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  4684016 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 4684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 304
Target Start/End: Original strand, 30099268 - 30099307
Alignment:
Q  265 ttttgttgacataaaattctcttataaataggatcggagg 304  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  30099268 ttttgttgacctaaatttctcttataaataggatcggagg 30099307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 44397593 - 44397546
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  44397593 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 44398732 - 44398685
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  44398732 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 255 - 309
Target Start/End: Original strand, 12170475 - 12170529
Alignment:
Q  255 atacatcaacttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||| ||||||| ||||| |||  ||||||| |||||||||||||||||||||    
T  12170475 atacattaacttttattgacctaattttctcttgtaaataggatcggagggagta 12170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 13197794 - 13197840
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  13197794 acttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 16044401 - 16044447
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  16044401 acttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 310
Target Start/End: Complemental strand, 23227393 - 23227271
Alignment:
Q  188 cagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctctt 287  Q
    |||| |||||||||||| | |||| |||||||||||||  |||||||| | |  |||| |||   ||||||||||  |||||||||| ||||  | ||||    
T  23227393 cagtcctatttataagagacattttggtcaacaaaagttgatgtatttggtccaaattcttagtcagatacatcacattttgttgacctaaatatttctt 23227294  T
Q  288 ataaataggatcggagggagtat 310  Q
    ||||||| || | ||||||||||    
T  23227293 ataaatatgaccagagggagtat 23227271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 31150707 - 31150653
Alignment:
Q  255 atacatcaacttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||| |||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  31150707 atacataaacttttgttgacgcaactttctcttataaataggatcggagagagta 31150653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 37666694 - 37666740
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  37666694 acttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 3243181 - 3243108
Alignment:
Q  242 aatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtattattt 315  Q
    |||| ||||| ||||||||||  ||| |||||| ||||  | |||||||||||||||||| ||||||| |||||    
T  3243181 aattcttaacgagatacatcacatttagttgacctaaatgtttcttataaataggatcggggggagtaatattt 3243108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 14740521 - 14740464
Alignment:
Q  255 atacatcaacttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    |||||| | |||||||||||| |||  ||||||||| ||||||||| |||||||||||    
T  14740521 atacattaccttttgttgacacaaatatctcttatatataggatcgaagggagtatta 14740464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 15271113 - 15271053
Alignment:
Q  250 actagatacatcaacttttgttgacataaaat-tctcttataaataggatcggagggagtat 310  Q
    ||||||||||||||||||||||| | | |||| ||||||||||||| |||||||| ||||||    
T  15271113 actagatacatcaacttttgttg-cttcaaatgtctcttataaataagatcggagagagtat 15271053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 741
Target Start/End: Complemental strand, 43287736 - 43287676
Alignment:
Q  683 tgcactctttttcccttcac--tggttttgtcccattgaatttttgtggtaaagtttttaa 741  Q
    ||||||||||||||||| ||  ||||||||||||||||| ||||  |||||| ||||||||    
T  43287736 tgcactctttttcccttaaccatggttttgtcccattgagttttcctggtaaggtttttaa 43287676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 45294438 - 45294397
Alignment:
Q  194 tatttataagaaaaatttaggtcaacaaaagtgaatgtattt 235  Q
    ||||| |||||||||||||||||||||||||| || ||||||    
T  45294438 tatttttaagaaaaatttaggtcaacaaaagttaaagtattt 45294397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 3e-90; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 308 - 715
Target Start/End: Complemental strand, 6585603 - 6585183
Alignment:
Q  308 tattatttattactttgatatattagaaatgtaggttatttgtgtgatgctcata-tgaaattttagcactacataaagaaagtcgagaatgtgtttagt 406  Q
    |||||||| |||||||| ||||||||||||| | ||| |||||||||||| |||| |||||||||||||||||||||| |||||||| ||||| ||| ||    
T  6585603 tattatttgttactttgttatattagaaatgcaagttctttgtgtgatgcccataatgaaattttagcactacataaataaagtcgaaaatgtatttggt 6585504  T
Q  407 tgaggtcaatgattgaacacatagaagaaacatgcaatt-gtcttctgaaatagtgaatgaaacaaaccttt-at-aacatgataccaggtgcattgctc 503  Q
    ||| ||  |||||||||||||| |||||||| ||||||| ||||| || || |||||||||||||| ||||| || || ||||||||| |||||||||||    
T  6585503 tgaagtttatgattgaacacatggaagaaacttgcaatttgtcttttggaagagtgaatgaaacaatccttttatgaatatgataccatgtgcattgctc 6585404  T
Q  504 agttgaaggaaggtgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||| ||| ||||||||||||||||||||||||||| |   ||||||||||| |||| | |||||||||  |||||||||||||||||| |||||||    
T  6585403 agttgaaagaatgtgatcttcagaagaatgatgatataaccagacaacaaatttgatcgtttgataatcttgtagaccttttcacaaagtcattcccaag 6585304  T
Q  604 cataattttttaacaaccgatacaaaatattgatctt----gtctcggagatgattatttgattgagggggagat----atatagtttgcactctttttc 695  Q
    |||||||||| ||||||  ||| ||||||||||||||    ||||  ||||||||| ||||| ||||||||||||    ||||| |||||||||||||||    
T  6585303 cataatttttgaacaactaatataaaatattgatcttcatcgtctaagagatgattgtttga-tgagggggagatataaatatattttgcactctttttc 6585205  T
Q  696 ccttcac--tggttttgtccca 715  Q
    |||| ||  |||||||||||||    
T  6585204 ccttaaccatggttttgtccca 6585183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 317 - 598
Target Start/End: Original strand, 26653459 - 26653742
Alignment:
Q  317 ttactttgatatattagaaatgtaggttatttgtgtgatgctcata-tgaaattttagcactacataaagaaagtcgagaatgtgtttagttgaggtcaa 415  Q
    |||||||| ||||||| ||||| |||||||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||||||| ||||||||| |    
T  26653459 ttactttgttatattataaatgcaggttatttgtgtgatgctcgtaatgaaattttagcaatacttaaagaaagtcgagaatgtgtttggttgaggtcta 26653558  T
Q  416 tgattgaacacatagaagaaacatg-caattgtcttctgaaatagtgaatgaaacaaacctttat-aacatgataccaggtgcattgctcagttgaagga 513  Q
    ||||| |||| ||||||||||| ||    ||||||||||||| | |||||||||||| ||||||| || |||||| ||  ||||||||| | ||||| |     
T  26653559 tgattaaacatatagaagaaacttgttgtttgtcttctgaaaaattgaatgaaacaatcctttatgaatatgatatcatatgcattgcttaattgaaagg 26653658  T
Q  514 aggtgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactc 598  Q
    |||||||||||| |||||||| || | ||||  |||| ||||||||  |||| |||||||||| |||||||||||||||||||||    
T  26653659 aggtgatcttcataagaatgaagaca-aagcaatcaagaaatttgtctgtgtgataatcttgcagaccttttcacaaagtcactc 26653742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 178 - 317
Target Start/End: Original strand, 48336262 - 48336401
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  48336262 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 48336361  T
Q  278 aaattctcttataaataggatcggagggagtattatttat 317  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  48336362 aaattttcttataaataggaccggagggagtattatttat 48336401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 24704370 - 24704501
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||  ||    
T  24704370 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaa 24704469  T
Q  279 aattctcttataaataggatcggagggagtat 310  Q
    ||||||||||||||||||||||||||||||||    
T  24704470 aattctcttataaataggatcggagggagtat 24704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 178 - 309
Target Start/End: Original strand, 42797731 - 42797862
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  42797731 atactacctccggtcctatatataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccta 42797830  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||| |||||||||||    
T  42797831 aaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 178 - 309
Target Start/End: Original strand, 47833610 - 47833741
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  47833610 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 47833709  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||| |||||||||||    
T  47833710 aaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 190 - 312
Target Start/End: Original strand, 33621807 - 33621929
Alignment:
Q  190 gttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttat 289  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||| ||||||    
T  33621807 gttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttat 33621906  T
Q  290 aaataggatcggagggagtatta 312  Q
    |||||||| ||||||||||||||    
T  33621907 aaataggaccggagggagtatta 33621929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 179 - 309
Target Start/End: Original strand, 46797725 - 46797855
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||    
T  46797725 tactacctccggttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaa 46797824  T
Q  279 aattctcttataaataggatcggagggagta 309  Q
    ||||||||||||||||||| |||||||||||    
T  46797825 aattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 193 - 315
Target Start/End: Complemental strand, 47838733 - 47838611
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  47838733 ctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaa 47838634  T
Q  293 taggatcggagggagtattattt 315  Q
    ||||| |||||||||||||||||    
T  47838633 taggaccggagggagtattattt 47838611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 178 - 315
Target Start/End: Complemental strand, 51894713 - 51894576
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||  |    
T  51894713 atactacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtttttggactgaatttttaaccagatacatcaacttttgttgaccca 51894614  T
Q  278 aaattctcttataaataggatcggagggagtattattt 315  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  51894613 aaattctcttataaataggaccggagggagtaatattt 51894576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 178 - 309
Target Start/End: Original strand, 3372120 - 3372251
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  3372120 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 3372219  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    ||||| |||||||||||||| |||||||||||    
T  3372220 aaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 53337370 - 53337501
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||  ||    
T  53337370 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaa 53337469  T
Q  279 aattctcttataaataggatcggagggagtat 310  Q
    ||||||||||||||||||| ||||||||||||    
T  53337470 aattctcttataaataggaccggagggagtat 53337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 179 - 309
Target Start/End: Complemental strand, 6122023 - 6121893
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  6122023 tactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 6121924  T
Q  279 aattctcttataaataggatcggagggagta 309  Q
    ||||||||||||||||||| |||||||||||    
T  6121923 aattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 179 - 309
Target Start/End: Complemental strand, 20538816 - 20538686
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  ||    
T  20538816 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaaattttgttgacccaa 20538717  T
Q  279 aattctcttataaataggatcggagggagta 309  Q
    ||||||||||||||||||| |||||||||||    
T  20538716 aattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 178 - 310
Target Start/End: Original strand, 3992975 - 3993107
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  3992975 atactacctccggtcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 3993074  T
Q  278 aaattctcttataaataggatcggagggagtat 310  Q
    ||||||||||||||||| || ||||||||||||    
T  3993075 aaattctcttataaataagaccggagggagtat 3993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 41469882 - 41469763
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  41469882 ctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgaccaaaaattctcttataaa 41469783  T
Q  293 taggatcggagggagtatta 312  Q
    ||||| ||||||||||||||    
T  41469782 taggaccggagggagtatta 41469763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 52756675 - 52756806
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  52756675 tactatctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 52756774  T
Q  279 aattctcttataaataggatcggagggagtat 310  Q
    |||||| |||||||||||| || |||||||||    
T  52756775 aattcttttataaataggaccgaagggagtat 52756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 193 - 314
Target Start/End: Original strand, 3422075 - 3422195
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  3422075 ctatttataagagaaatttaggtcaacaaaa-tgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaa 3422173  T
Q  293 taggatcggagggagtattatt 314  Q
    ||||| ||||||||||||||||    
T  3422174 taggaccggagggagtattatt 3422195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 177 - 310
Target Start/End: Complemental strand, 3904815 - 3904682
Alignment:
Q  177 tatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacat 276  Q
    ||||||| |||| || |||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||      
T  3904815 tatactacctccggtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaatttttgttgaccc 3904716  T
Q  277 aaaattctcttataaataggatcggagggagtat 310  Q
    ||||||||||||||||||||| ||||||||||||    
T  3904715 aaaattctcttataaataggaccggagggagtat 3904682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 191 - 312
Target Start/End: Original strand, 5986888 - 5987009
Alignment:
Q  191 ttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttata 290  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  5986888 ttctatttataagagaaatataggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 5986987  T
Q  291 aataggatcggagggagtatta 312  Q
    ||||||| ||||| ||||||||    
T  5986988 aataggaccggagagagtatta 5987009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 534 - 786
Target Start/End: Original strand, 6407599 - 6407862
Alignment:
Q  534 atgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaagcataattttttaacaaccgatacaaaatat 633  Q
    ||||||||||   ||||||||||| ||| |||  ||||||||| |||||||||||||||||||||||||||||||||||| |||||  |||||||||| |    
T  6407599 atgatataagtcgtcaacaaattttttcatgtgttaatcttgcagaccttttcacaaagtcactcccaagcataatttttgaacaaatgatacaaaattt 6407698  T
Q  634 tgatctt----gtctcggagatgattatttgattgag--ggggagat--atatagtttgcactctttttcccttcac--tgg-ttttgtcccattgaatt 722  Q
    |||||||    ||||| ||||||||| ||| || |||  ||||| ||  ||||| ||||||||||||||||||||||  ||| |||||||||| || |||    
T  6407699 tgatcttaatcgtctcagagatgattgtttaatcgagatggggatataaatatattttgcactctttttcccttcaccatggattttgtcccactggatt 6407798  T
Q  723 tttgtggtaaagtttttaatgagatagatatactggatattgtactctttttccttcactaaga 786  Q
    ||  |||||  ||||||||||||  |||||||  ||||| ||||||||||||||||||||||||    
T  6407799 ttgctggtatggtttttaatgaggcagatatatcggataatgtactctttttccttcactaaga 6407862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 176 - 309
Target Start/End: Original strand, 7579307 - 7579440
Alignment:
Q  176 atatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgaca 275  Q
    |||||||| |||| || |||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||     
T  7579307 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacc 7579406  T
Q  276 taaaattctcttataaataggatcggagggagta 309  Q
     ||||||||||||||||||| | |||||| ||||    
T  7579407 caaaattctcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 43900563 - 43900679
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  43900563 ctatttataagagaaatttaggtcaacaaaagtaaatgtatttggactgaatttttaactagatacatcaacttttgttaacccaaaattctcttataaa 43900662  T
Q  293 taggatcggagggagta 309  Q
    ||||| |||||| ||||    
T  43900663 taggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 172 - 290
Target Start/End: Original strand, 33551194 - 33551312
Alignment:
Q  172 aactatatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgtt 271  Q
    |||||||||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  33551194 aactatatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtattttgactgaatttttaactagatacatcaacttttgta 33551293  T
Q  272 gacataaaattctcttata 290  Q
     ||  ||||||||||||||    
T  33551294 aacccaaaattctcttata 33551312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 175 - 308
Target Start/End: Complemental strand, 40913323 - 40913190
Alignment:
Q  175 tatatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgac 274  Q
    ||||||||  |||| || |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||     
T  40913323 tatatactccctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactggatatatcaacttttgttgat 40913224  T
Q  275 ataaaattctcttataaataggatcggagggagt 308  Q
      ||| ||||||||||||||||| ||||||||||    
T  40913223 ccaaatttctcttataaataggaccggagggagt 40913190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 172 - 290
Target Start/End: Original strand, 26231570 - 26231688
Alignment:
Q  172 aactatatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgtt 271  Q
    |||||||||||| |||| || |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||     
T  26231570 aactatatactacctccggtcctatttataagagaaatttaggtcaacaaaagcgaatgtatttggactgaatttttaactagatatatcaacttttgta 26231669  T
Q  272 gacataaaattctcttata 290  Q
     ||  ||||||||||||||    
T  26231670 aaccgaaaattctcttata 26231688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 308 - 435
Target Start/End: Complemental strand, 18899685 - 18899557
Alignment:
Q  308 tattatttattactttgatatattagaaatgtaggttatttgtgtgatgctcata-tgaaattttagcactacataaagaaagtcgagaatgtgtttagt 406  Q
    |||||||| |||||||| ||||||||| ||| ||||||||||| ||||||||||| || ||||||| ||||||||||   ||||||||||||||||| ||    
T  18899685 tattatttgttactttgttatattagatatgcaggttatttgtttgatgctcataatggaattttaacactacataagagaagtcgagaatgtgtttggt 18899586  T
Q  407 tgaggtcaatgattgaacacatagaagaa 435  Q
    ||||||| |||||| |||||||| |||||    
T  18899585 tgaggtctatgattaaacacataaaagaa 18899557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 193 - 309
Target Start/End: Complemental strand, 41615792 - 41615676
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| ||| |||||||||||||||| ||||||||| |||| |||||||||||| |||||||||||||||||||   ||  ||||||||||||    
T  41615792 ctatttataagagaaaattaggtcaacaaaagttaatgtatttggacttaatttttaactaaatacatcaacttttgttgatccaattttctcttataaa 41615693  T
Q  293 taggatcggagggagta 309  Q
    ||||| |||| ||||||    
T  41615692 taggaccggatggagta 41615676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 494 - 633
Target Start/End: Complemental strand, 24858338 - 24858199
Alignment:
Q  494 tgcattgctcagttgaaggaaggtgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagt 593  Q
    ||||||||| ||||||| ||||||| | || ||||||||||||||||||    |||| |||||||||| ||| ||||||||||  |||||||||||||||    
T  24858338 tgcattgcttagttgaaagaaggtggtttttagaagaatgatgatataaatagtcaataaatttgttcatgtgataatcttgcataccttttcacaaagt 24858239  T
Q  594 cactcccaagcataattttttaacaaccgatacaaaatat 633  Q
     || | |||||||| |||||||||||| ||||||||||||    
T  24858238 taccctcaagcatatttttttaacaactgatacaaaatat 24858199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 17344219 - 17344345
Alignment:
Q  185 ctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattct 284  Q
    |||| ||||||||||||||| ||| |||  |||||||||||  |||||| |  |||||||||||||   ||||||||||||||||||||   ||| ||||    
T  17344219 ctccggttctatttataagagaaagttaaatcaacaaaagttgatgtatctgaactgaatttttaatcggatacatcaacttttgttgatccaaatttct 17344318  T
Q  285 cttataaataggatcggagggagtatt 311  Q
    |||||||||| ||| ||||||||||||    
T  17344319 cttataaataagattggagggagtatt 17344345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 517 - 599
Target Start/End: Complemental strand, 13753886 - 13753804
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcc 599  Q
    ||||||| |||||| || |||||||||| ||||||||||| |||||||| |||||||||| ||| |||| |||||||||||||    
T  13753886 tgatctttagaagagtggtgatataagcattcaacaaattcgttcgtgtgataatcttgcagacatttttacaaagtcactcc 13753804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 517 - 603
Target Start/End: Complemental strand, 12429399 - 12429313
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||||||||| ||| |||||| | | ||||||||||| | |||||| |||||||||| ||| |||| |||||||||||||||||    
T  12429399 tgatcttcagaaggatggtgatatcaacattcaacaaattcggtcgtgtgataatcttgcagacgtttttacaaagtcactcccaag 12429313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 17236919 - 17236845
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgta-tttagactgaatttttaac 251  Q
    ||||| ||||| || ||||||||||||||||||| |||||||||||||  ||||| |||||||||||||||||||    
T  17236919 atactctctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtattttagactgaatttttaac 17236845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 194 - 296
Target Start/End: Complemental strand, 50430533 - 50430431
Alignment:
Q  194 tatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaat 293  Q
    |||||||||||  || || |||||||||||||  |||||||| || |||||||||||| ||||||||||| ||||||||||  |||  | ||||||||||    
T  50430533 tatttataagagcaagttgggtcaacaaaagttgatgtatttggattgaatttttaaccagatacatcaatttttgttgacccaaatatatcttataaat 50430434  T
Q  294 agg 296  Q
    |||    
T  50430433 agg 50430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 4780358 - 4780425
Alignment:
Q  242 aatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||  |||||||| |||||||||||||  ||| ||||||||||||||||| |||||||||||    
T  4780358 aatttttaatcagatacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 603
Target Start/End: Complemental strand, 911363 - 911277
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||||||||| ||| |||||| ||| ||||||||||| | |||||| |||||||||| ||  |||| |||||||| ||||||||    
T  911363 tgatcttcagaaggatggtgatatcagcattcaacaaattcggtcgtgtgataatcttgcagatgtttttacaaagtcgctcccaag 911277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 603
Target Start/End: Complemental strand, 12435863 - 12435777
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||||||||| ||| |||||| ||| ||||||||||| | |||||| |||||||||| ||  |||| |||||||| ||||||||    
T  12435863 tgatcttcagaaggatggtgatatcagcattcaacaaattcggtcgtgtgataatcttgcagatgtttttacaaagtcgctcccaag 12435777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 675 - 786
Target Start/End: Complemental strand, 24858202 - 24858089
Alignment:
Q  675 atatagtttgcactctttttcccttcac--tggttttgtcccattgaatttttgtggtaaagtttttaatgagatagatatactggatattgtactcttt 772  Q
    ||||| |||||||||||||| |||||||  ||||||| ||||| ||| ||||| ||||||  ||||||| |||  | |||||  | ||||||||||||||    
T  24858202 atatattttgcactcttttttccttcaccatggttttctcccactgagtttttctggtaagatttttaacgaggcaaatatatcgaatattgtactcttt 24858103  T
Q  773 ttccttcactaaga 786  Q
    ||| ||||||||||    
T  24858102 ttcattcactaaga 24858089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 603
Target Start/End: Original strand, 29333282 - 29333368
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||||||||| ||| |||||| ||| ||||||||||| | |||||| |||||||||| ||  |||| |||||||| ||||||||    
T  29333282 tgatcttcagaaggatggtgatatcagcattcaacaaattcggtcgtgtgataatcttgcagatgtttttacaaagtcgctcccaag 29333368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 273
Target Start/End: Original strand, 29845654 - 29845739
Alignment:
Q  188 cagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatc-aacttttgttga 273  Q
    |||| ||| |||||||| |||||||||||||||||| | ||| |||||  |||||||||||||||| ||||||| ||||||||||||    
T  29845654 cagtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaacta-atacatcaaacttttgttga 29845739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 603
Target Start/End: Original strand, 42410749 - 42410835
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||||||||| ||| |||||| ||| ||||||||||| | |||||| |||||||||| ||  |||| |||||||| ||||||||    
T  42410749 tgatcttcagaaggatggtgatatcagcattcaacaaattcggtcgtgtgataatcttgcagatgtttttacaaagtcgctcccaag 42410835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 238 - 304
Target Start/End: Original strand, 45478151 - 45478217
Alignment:
Q  238 actgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagg 304  Q
    ||||||||||||||  ||||||||||||||| |||||  | | ||||||||||||||||||||||||    
T  45478151 actgaatttttaaccggatacatcaacttttattgacccacatttctcttataaataggatcggagg 45478217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 25855097 - 25855174
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgt 270  Q
    |||||||| ||| ||| ||  |||||||||||| ||||||||| ||||||||||||||| | ||||||| ||||||||    
T  25855097 ctatttatgagagaaagttgagtcaacaaaagttaatgtatttggactgaatttttaaccaaatacatcgacttttgt 25855174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 43900595 - 43900547
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||| |||| ||||||||||||||||| |||||||||||||    
T  43900595 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 43900547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 47833657 - 47833605
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattattt 315  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||||||    
T  47833657 acttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 47833605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 1716365 - 1716419
Alignment:
Q  245 ttttaactagatacatcaacttttgttgacataaaattctcttataaataggatc 299  Q
    ||||||| |||| |||||||||| |||||| |||| |||||||||||||||||||    
T  1716365 ttttaaccagatgcatcaactttggttgacctaaacttctcttataaataggatc 1716419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 48336309 - 48336259
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattat 313  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||||    
T  48336309 acttttgttgacctaaatttctcttataaataggaccggaggtagtattat 48336259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 3372167 - 3372118
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||||    
T  3372167 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 3372118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 31013036 - 31013121
Alignment:
Q  194 tatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaa 279  Q
    ||||||||| | | |||||| |||||||||||  |||||||| |  | |||| |||||||||||||||| ||||||||||| ||||    
T  31013036 tatttataaaagacatttagatcaacaaaagtagatgtatttggtttaaattcttaactagatacatcatcttttgttgacctaaa 31013121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 32822326 - 32822285
Alignment:
Q  192 tctatttataagaaaaatttaggtcaacaaaagtgaatgtat 233  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  32822326 tctatttataagaaaaatttaggtcaacaaaaatggatgtat 32822285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 45725905 - 45725974
Alignment:
Q  228 atgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaatagga 297  Q
    ||||||||||||| |||| ||||||| |||| | |||||||||||||  ||  |||||||||||||||||    
T  45725905 atgtatttagactaaattcttaactaaatacgttaacttttgttgacgaaactttctcttataaatagga 45725974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 17236864 - 17236919
Alignment:
Q  255 atacatcaacttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    ||||||||||||||||||||  ||| || |||||||||||||| ||||| ||||||    
T  17236864 atacatcaacttttgttgacccaaatttttcttataaataggaccggagagagtat 17236919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 33551247 - 33551200
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  33551247 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 33551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 40913273 - 40913320
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||  |||| ||||||||||||||||| ||||||||||||    
T  40913273 acttttgttgatctaaatttctcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 47838701 - 47838748
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    ||||||||||||  ||| |||||||||||||||||||||||| |||||    
T  47838701 acttttgttgaccgaaatttctcttataaataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 242 - 311
Target Start/End: Original strand, 6422530 - 6422600
Alignment:
Q  242 aatttttaactagatacatcaacttttgttgacataaaattctcttataaat-aggatcggagggagtatt 311  Q
    |||||| ||||| ||| ||||| |||||||||| ||||  |||||||||||| ||||||||| ||||||||    
T  6422530 aattttaaactaaatatatcaatttttgttgacctaaatatctcttataaataaggatcggatggagtatt 6422600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 20538770 - 20538816
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  20538770 acttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 24704416 - 24704370
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  24704416 acttttgttgacctaaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 26231622 - 26231576
Alignment:
Q  264 cttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    ||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  26231622 cttttgttgacctaaatttctcttataaataggaccggaggtagtat 26231576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 51894666 - 51894716
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattat 313  Q
    |||||||||||| |||| || |||||||||||||| |||||| ||||||||    
T  51894666 acttttgttgacctaaatttttcttataaataggaccggaggtagtattat 51894716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 53337416 - 53337370
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  53337416 acttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 3993022 - 3992973
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    ||||||||||||  ||| ||||||||||||||||| |||||| |||||||    
T  3993022 acttttgttgaccgaaatttctcttataaataggaccggaggtagtatta 3992973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 6924804 - 6924724
Alignment:
Q  188 cagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttg 269  Q
    |||| |||| |||||||||| || |||||||||||||| ||||||||| | || |||||| ||  |||| ||||||||||||    
T  6924804 cagtcctatatataagaaaagtt-aggtcaacaaaagttaatgtatttggtctaaattttgaatcagatgcatcaacttttg 6924724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 17344269 - 17344212
Alignment:
Q  253 agatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||||||  |||  ||||||||||||||| | ||||| ||||||    
T  17344269 agatacatcaacttttgttgatttaactttctcttataaatagaaccggagcgagtat 17344212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 42797778 - 42797729
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||| |||| |||||||||| |||||| |||||| |||||||    
T  42797778 acttttgttgacctaaatttctcttatatataggaccggaggtagtatta 42797729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 1e-80; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 308 - 785
Target Start/End: Original strand, 10936728 - 10937216
Alignment:
Q  308 tattatttattactttgatatattagaaatgtaggttatttgtgtgatgctcatatgaaattttagcactacataaagaaagtcgagaatgtgtttagtt 407  Q
    |||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||| | ||||| ||| |||    
T  10936728 tattatttgttactttattatattagaaatgcaggttatttgtgtgatgctcatatgaaatttttggactacataaagaaagtcaataatgtatttggtt 10936827  T
Q  408 gaggtcaatgattgaacacatagaagaaacatgcaattg-tcttctgaaatagtgaatgaaacaaacctttat-aacatgataccaggtgcattgctcag 505  Q
    | |||| |||||||||||||||||| |||| |||||||  |||||   |  |||||||||||||| | ||||| || ||||||||| ||||||| ||||     
T  10936828 gtggtctatgattgaacacatagaataaacttgcaatttatcttccagatgagtgaatgaaacaatcatttatgaatatgataccatgtgcattactcac 10936927  T
Q  506 ttgaaggaaggtgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaagca 605  Q
    |||||   |  ||||| | ||| ||||||||||| ||||  ||||    ||| ||| ||| ||||||||||  || |||||||||||||||| |||| ||    
T  10936928 ttgaaaagatatgatcatgagaggaatgatgatacaagcaatcaaatttttttttcatgtgataatcttgcaaacattttcacaaagtcacttccaaaca 10937027  T
Q  606 taattttttaacaaccgatacaaaatattgatctt----gtctcggagatgattatttgattgagggggagat----atatagtttgcactctttttccc 697  Q
    |||||||| ||||||  |||||||| |||||||||    ||||| ||||||| | ||||||||||||||||||    ||||| ||||||||||| |||||    
T  10937028 taatttttaaacaactcatacaaaagattgatcttcatcgtctcagagatgaatgtttgattgagggggagatataaatatattttgcactcttcttccc 10937127  T
Q  698 ttcac--tggttttgtcccattgaatttttgtggtaaagtttttaatgagatagatatactggatattgtactctttttccttcactaag 785  Q
    |||||  ||||||||||||| ||  ||||| |||||| ||||||||||||| |||||||   || |||||||||||||||||||||||||    
T  10937128 ttcaccatggttttgtcccaatgggtttttatggtaaggtttttaatgagacagatatatcaga-attgtactctttttccttcactaag 10937216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 174 - 310
Target Start/End: Complemental strand, 49823516 - 49823380
Alignment:
Q  174 ctatatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttga 273  Q
    |||||||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49823516 ctatatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 49823417  T
Q  274 cataaaattctcttataaataggatcggagggagtat 310  Q
    |  ||||||||||||||||||||| ||||||||||||    
T  49823416 cccaaaattctcttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 175 - 309
Target Start/End: Complemental strand, 19557186 - 19557052
Alignment:
Q  175 tatatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgac 274  Q
    ||||||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19557186 tatatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 19557087  T
Q  275 ataaaattctcttataaataggatcggagggagta 309  Q
      ||||||||||||||||||||| |||||||||||    
T  19557086 ccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 179 - 311
Target Start/End: Original strand, 10297979 - 10298111
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  10297979 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 10298078  T
Q  279 aattctcttataaataggatcggagggagtatt 311  Q
    ||||||||||||||||||| |||||||||||||    
T  10298079 aattctcttataaataggaccggagggagtatt 10298111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 2787963 - 2787832
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    ||||||||||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||  |    
T  2787963 atactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgaccca 2787864  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||| |||||||||||    
T  2787863 aaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 21295457 - 21295326
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||    
T  21295457 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgaccta 21295358  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||| |||||||||||    
T  21295357 aaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 193 - 314
Target Start/End: Complemental strand, 8817502 - 8817381
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  8817502 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaa 8817403  T
Q  293 taggatcggagggagtattatt 314  Q
    ||||| |||| |||||||||||    
T  8817402 taggaccggaaggagtattatt 8817381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 178 - 311
Target Start/End: Complemental strand, 40691127 - 40690994
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  40691127 atactaactccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 40691028  T
Q  278 aaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||||||||||| |||||||||||||    
T  40691027 aaattctcttataaataggaccggagggagtatt 40690994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 193 - 310
Target Start/End: Original strand, 46208044 - 46208161
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  46208044 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacctaaaattctcttataaa 46208143  T
Q  293 taggatcggagggagtat 310  Q
    ||||| ||||||||||||    
T  46208144 taggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 178 - 310
Target Start/End: Original strand, 4238593 - 4238725
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  4238593 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaa 4238692  T
Q  278 aaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||||| |||||| |||||    
T  4238693 aaattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 178 - 310
Target Start/End: Original strand, 8437424 - 8437556
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  8437424 atactacctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactca 8437523  T
Q  278 aaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||||| ||||||||||||    
T  8437524 aaattctcttataaataggaccggagggagtat 8437556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 178 - 310
Target Start/End: Original strand, 22721930 - 22722062
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  22721930 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 22722029  T
Q  278 aaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||||| |||| |||||||    
T  22722030 aaattctcttataaataggaccggatggagtat 22722062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 34080161 - 34080030
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  |    
T  34080161 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacaagatacatcaacttttgttgaccca 34080062  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||| |||||||||||    
T  34080061 aaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 178 - 309
Target Start/End: Original strand, 38964391 - 38964522
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  38964391 atactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaa 38964490  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||| |||||||||||    
T  38964491 aaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 193 - 311
Target Start/End: Original strand, 17653726 - 17653844
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  17653726 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaa 17653825  T
Q  293 taggatcggagggagtatt 311  Q
    ||||| |||||| ||||||    
T  17653826 taggaccggaggtagtatt 17653844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 179 - 309
Target Start/End: Original strand, 48340397 - 48340527
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  48340397 tactacctccggtcctatttacaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 48340496  T
Q  279 aattctcttataaataggatcggagggagta 309  Q
    ||||||||||||||||||| |||||||||||    
T  48340497 aattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 193 - 310
Target Start/End: Original strand, 37508935 - 37509052
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  37508935 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaa 37509034  T
Q  293 taggatcggagggagtat 310  Q
    ||||| |||||| |||||    
T  37509035 taggaccggaggtagtat 37509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 51406688 - 51406804
Alignment:
Q  194 tatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaat 293  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  51406688 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaat 51406787  T
Q  294 aggatcggagggagtat 310  Q
    |||| ||||||||||||    
T  51406788 aggaccggagggagtat 51406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 44785527 - 44785396
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  44785527 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 44785428  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||| | |||||| ||||    
T  44785427 aaattctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 193 - 306
Target Start/End: Complemental strand, 9111610 - 9111497
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  9111610 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaa 9111511  T
Q  293 taggatcggaggga 306  Q
    ||||| ||||||||    
T  9111510 taggaccggaggga 9111497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 178 - 306
Target Start/End: Complemental strand, 42507486 - 42507358
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||  |    
T  42507486 atactacctccggtcctatttataatagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgaccca 42507387  T
Q  278 aaattctcttataaataggatcggaggga 306  Q
    |||||||||||||||||||| ||||||||    
T  42507386 aaattctcttataaataggaccggaggga 42507358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 185 - 315
Target Start/End: Complemental strand, 6013460 - 6013330
Alignment:
Q  185 ctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattct 284  Q
    ||||||| | |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||||||||  ||||||||    
T  6013460 ctccagtccaatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataaatttacttttgttgacccaaaattct 6013361  T
Q  285 cttataaataggatcggagggagtattattt 315  Q
    ||||||||||||| ||||||||||| |||||    
T  6013360 cttataaataggaccggagggagtaatattt 6013330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 193 - 315
Target Start/End: Original strand, 35513487 - 35513609
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||   | |||||| |||||||    
T  35513487 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaccttttattgatccagaattcttttataaa 35513586  T
Q  293 taggatcggagggagtattattt 315  Q
    ||||||||||||||||| |||||    
T  35513587 taggatcggagggagtagtattt 35513609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 193 - 311
Target Start/End: Complemental strand, 36095796 - 36095678
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   ||||||||||| ||||    
T  36095796 ctatttataagataaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttgtaaa 36095697  T
Q  293 taggatcggagggagtatt 311  Q
    || || ||||| |||||||    
T  36095696 taagaccggagtgagtatt 36095678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 42170461 - 42170358
Alignment:
Q  194 tatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaat 293  Q
    ||||||||||| |||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  42170461 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggagtgaatttttaaccagatacatcaacttttgttgacccaaaattctcttataaat 42170362  T
Q  294 agga 297  Q
    ||||    
T  42170361 agga 42170358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 193 - 315
Target Start/End: Complemental strand, 33943048 - 33942926
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||| | ||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||    
T  33943048 ctatttataaaagaaagttaggtcaacaaaagttaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctcttataaa 33942949  T
Q  293 taggatcggagggagtattattt 315  Q
    ||||||||| | |||||| ||||    
T  33942948 taggatcggcgagagtataattt 33942926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 517 - 640
Target Start/End: Original strand, 39875440 - 39875563
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaagcataattttttaa 616  Q
    ||||||||||||||| | |||||||||| ||||||||||| | || ||| |||||||||| || ||||||||||||||||| ||||||| ||||||| ||    
T  39875440 tgatcttcagaagaacggtgatataagcattcaacaaattcggtcttgtgataatcttgcagatcttttcacaaagtcacttccaagcaaaatttttgaa 39875539  T
Q  617 caaccgatacaaaatattgatctt 640  Q
    |||| ||||||||| |||| ||||    
T  39875540 caactgatacaaaaaattggtctt 39875563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 185 - 311
Target Start/End: Complemental strand, 26019603 - 26019478
Alignment:
Q  185 ctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattct 284  Q
    |||||||||||||||||||| ||| || ||| |||||| || ||||||| | |||| |||||| ||| |||||||| |||||| ||||||  ||  ||||    
T  26019603 ctccagttctatttataagagaaagttgggttaacaaa-gttaatgtatcttgactaaattttgaaccagatacataaactttggttgaccaaattttct 26019505  T
Q  285 cttataaataggatcggagggagtatt 311  Q
    |||||||||||||||||| ||||||||    
T  26019504 cttataaataggatcggaaggagtatt 26019478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 520 - 630
Target Start/End: Complemental strand, 21587601 - 21587491
Alignment:
Q  520 tcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaagcataattttttaacaa 619  Q
    |||| |||||||  ||||||||  | ||||||||||| |||| ||  |||||||||| |||||||| |||||||||||||||| |||| ||||| |||||    
T  21587601 tctttagaagaacaatgatatagacattcaacaaattcgttcttgagataatcttgcagacctttttacaaagtcactcccaaacatactttttgaacaa 21587502  T
Q  620 ccgatacaaaa 630  Q
    | |||||||||    
T  21587501 ctgatacaaaa 21587491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 33128202 - 33128261
Alignment:
Q  175 tatatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatt 234  Q
    |||||||| |||||||| ||| |||||||| |||||||||||||||||||| ||||||||    
T  33128202 tatatactctctccagtcctaattataagagaaatttaggtcaacaaaagttaatgtatt 33128261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 603
Target Start/End: Complemental strand, 2978752 - 2978666
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||||||||| ||| |||||| ||| ||||||||||| | |||||| |||||||||| ||  |||| |||||||| ||||||||    
T  2978752 tgatcttcagaaggatggtgatatcagcattcaacaaattcggtcgtgtgataatcttgcagatgtttttacaaagtcgctcccaag 2978666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 4238640 - 4238586
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattatttat 317  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||||||||    
T  4238640 acttttgttgacctaaatttctcttataaataggaccggaggtagtattatttat 4238586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 603
Target Start/End: Original strand, 21477150 - 21477236
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||||| ||| ||| |||||| ||| ||||||||||| | |||||| |||||||||| ||  |||| |||||||||||||||||    
T  21477150 tgatcttcataaggatggtgatatcagcattcaacaaattcggtcgtgtgataatcttgcagatgtttttacaaagtcactcccaag 21477236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 34988140 - 34988205
Alignment:
Q  244 tttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||||| ||||||||  |||  | |||||||||||||| |||||||||||    
T  34988140 tttttaactagatacatcaactattgttgactcaaatatttcttataaataggaccggagggagta 34988205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 9213530 - 9213646
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||| | | ||||  ||||||||||||  |||||| | |||| | ||| |||| | ||||||||| |||||||||| |||| |||||| |||||    
T  9213530 ctatttataaaagacattttagtcaacaaaagttgatgtatctggactaattttataaccaaatacatcaatttttgttgacctaaatttctctaataaa 9213629  T
Q  293 taggatcggagggagta 309  Q
    |||||  ||||||||||    
T  9213630 taggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 21295410 - 21295466
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattatttatta 319  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||| ||||||    
T  21295410 acttttgttgacctaaatttctcttataaataggaccggaggtagtattaattatta 21295466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 253 - 311
Target Start/End: Complemental strand, 9213572 - 9213514
Alignment:
Q  253 agatacatcaacttttgttgacataaaat-tctcttataaataggatcggagggagtatt 311  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||||    
T  9213572 agatacatcaacttttgttgac-taaaatgtcttttataaataggaccggagggagtatt 9213514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 43323074 - 43323145
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaac 264  Q
    |||||||||||||||| || |||||||||||||  |||||||| || | |||||||||| | ||||||||||    
T  43323074 ctatttataagaaaaaattgggtcaacaaaagttgatgtatttggattaaatttttaaccaaatacatcaac 43323145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 46208076 - 46208029
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  46208076 acttttgttgacctaaatttctcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 17653758 - 17653712
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||||||||    
T  17653758 acttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 22721977 - 22721927
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattat 313  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||||    
T  22721977 acttttgttgacctaaatttctcttataaataggaccggaggtagtattat 22721927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 37508967 - 37508921
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||||||||    
T  37508967 acttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 210 - 292
Target Start/End: Original strand, 49687902 - 49687984
Alignment:
Q  210 ttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||| |||||||||  ||||||||   || |||||| ||||||||| |||||||||||||||||||||  ||| |||||||    
T  49687902 ttaggtaaacaaaagttgatgtattttatctaaattttaaactagataaatcaacttttgttgacataaatgtcttttataaa 49687984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 2787916 - 2787969
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattattta 316  Q
    |||||||||||| |||| ||||||||||||||||| |||||  |||||||||||    
T  2787916 acttttgttgacctaaatttctcttataaataggaccggagatagtattattta 2787969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 5323272 - 5323337
Alignment:
Q  244 tttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||| | ||||||||||||||||||||  ||| ||  ||||||||||| |||||||||||||    
T  5323272 tttttaaccaaatacatcaacttttgttgacccaaattttacttataaatagtatcggagggagta 5323337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 311
Target Start/End: Complemental strand, 9027197 - 9027140
Alignment:
Q  254 gatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||||||||||||  ||  || |||||||||||||| |||||||||||||    
T  9027197 gatacatcaacttttgttgacccaactttatcttataaataggaccggagggagtatt 9027140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 34080114 - 34080163
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||||    
T  34080114 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 34080163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 34381529 - 34381464
Alignment:
Q  247 ttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    ||||||||||||||||| ||||||||||| |   || |||||||||||| | ||||||||||||||    
T  34381529 ttaactagatacatcaatttttgttgacaaatttttttcttataaatagaaccggagggagtatta 34381464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 273
Target Start/End: Complemental strand, 29285873 - 29285796
Alignment:
Q  194 tatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttga 273  Q
    ||||||||||| |||||||||||||||||||||||  ||| |   || |||||| ||||| |||||| ||||||||||||    
T  29285873 tatttataagataaatttaggtcaacaaaagtgaa--tatctgatctaaattttgaactacatacataaacttttgttga 29285796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 38964438 - 38964386
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattattt 315  Q
    |||||||||||  |||| ||||||||||||||||| |||||| ||||||||||    
T  38964438 acttttgttgatctaaatttctcttataaataggaccggaggtagtattattt 38964386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 44785480 - 44785528
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  44785480 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 44785528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 19557136 - 19557183
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  19557136 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 19557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 33943008 - 33943063
Alignment:
Q  255 atacatcaacttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||| ||||||||||||| |||  |||| ||||||||||||||||| |||||||    
T  33943008 atacattaacttttgttgacctaactttcttttataaataggatcggaaggagtat 33943063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 36095764 - 36095811
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| || |||||||||||||| ||||||||||||    
T  36095764 acttttgttgacctaaatttatcttataaataggaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 49823465 - 49823512
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  49823465 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 49823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 10298025 - 10297979
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  10298025 acttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 35513519 - 35513473
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| || ||||||||    
T  35513519 acttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 250 - 312
Target Start/End: Complemental strand, 45652128 - 45652066
Alignment:
Q  250 actagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||| | ||||||||||  |||  ||||||||||||||||  |||||||||||||    
T  45652128 actagatacatccatttttgttgactcaaatgtctcttataaataggactggagggagtatta 45652066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 8092602 - 8092683
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgac 274  Q
    |||||||||||| ||| ||   ||||| |||||  |||||| | |||| |||||||||| |||||||||||||| |||||||    
T  8092602 ctatttataagagaaaattgaatcaactaaagttgatgtatctcgactaaatttttaaccagatacatcaacttctgttgac 8092683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 8437471 - 8437422
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    |||||| ||||| |||| ||||||||||||||||| |||||| |||||||    
T  8437471 acttttattgacctaaatttctcttataaataggaccggaggtagtatta 8437422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 42170430 - 42170479
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||| |||| |||||||||||||| || |||||| |||||||    
T  42170430 acttttgttgacctaaatttctcttataaataagaccggaggtagtatta 42170479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 42507439 - 42507488
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||| |||| |||| |||||||||||| |||||| |||||||    
T  42507439 acttttgttgacctaaatttctattataaataggaccggaggtagtatta 42507488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 149; Significance: 3e-78; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 308 - 640
Target Start/End: Original strand, 26248736 - 26249068
Alignment:
Q  308 tattatttattactttgatatattagaaatgtaggttatttgtgtgatgctcatatgaaattttagcactacataaagaaagtcgagaatgtgtttagtt 407  Q
    |||||||| ||| |||| ||||||||||||| ||||||||||||| || || ||  || | |||| |||||||||||||||||||||||||||||| |||    
T  26248736 tattattttttattttgttatattagaaatgcaggttatttgtgtcatactaat--gagactttaacactacataaagaaagtcgagaatgtgtttggtt 26248833  T
Q  408 gaggtcaatgattgaacacatagaagaaacatgcaattgt-cttctgaaatagtgaatgaaacaaacctttat-aacatgataccaggtgcattgctcag 505  Q
    |||||| ||||||||| ||||||||| ||| ||||||| | |||| |||| ||||||||||| || | ||||| || ||| ||||| |||||||||||||    
T  26248834 gaggtctatgattgaatacatagaaggaacttgcaatttttcttccgaaagagtgaatgaaagaatcatttatgaatatgttaccatgtgcattgctcag 26248933  T
Q  506 ttgaaggaaggtgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcac-aaagtcactcccaagc 604  Q
    ||||| ||||||||||||||||| |||||||||||||||  ||||||||||||||||||| |||||||||| | ||||| ||| ||||||||| ||||||    
T  26248934 ttgaaagaaggtgatcttcagaataatgatgatataagcactcaacaaatttgttcgtgtgataatcttgcaggcctttccacaaaagtcact-ccaagc 26249032  T
Q  605 ataattttttaacaaccgatacaaaatattgatctt 640  Q
    ||||||||| | ||||  ||||||||||||||||||    
T  26249033 ataatttttgatcaacaaatacaaaatattgatctt 26249068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 178 - 315
Target Start/End: Original strand, 7240748 - 7240885
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  7240748 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 7240847  T
Q  278 aaattctcttataaataggatcggagggagtattattt 315  Q
    |||||||||||||||||||| |||||||||||||||||    
T  7240848 aaattctcttataaataggaccggagggagtattattt 7240885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 179 - 309
Target Start/End: Complemental strand, 94448 - 94318
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    |||||||||| || |||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  ||    
T  94448 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaa 94349  T
Q  279 aattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||||||||||||||    
T  94348 aattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 178 - 312
Target Start/End: Complemental strand, 1738578 - 1738444
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  1738578 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 1738479  T
Q  278 aaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||||||||||| ||||||||||||||    
T  1738478 aaattctcttataaataggaccggagggagtatta 1738444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 177 - 315
Target Start/End: Original strand, 7482223 - 7482361
Alignment:
Q  177 tatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacat 276  Q
    ||||||| |||| || |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||      
T  7482223 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgaccc 7482322  T
Q  277 aaaattctcttataaataggatcggagggagtattattt 315  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  7482323 aaaattctcttataaataggaccggagggagtattattt 7482361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 179 - 312
Target Start/End: Original strand, 36583395 - 36583528
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||  ||    
T  36583395 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacttaatttttaactagatacatcaacttttgttgacccaa 36583494  T
Q  279 aattctcttataaataggatcggagggagtatta 312  Q
    ||||||||||||||||||||||||||||||||||    
T  36583495 aattctcttataaataggatcggagggagtatta 36583528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 175 - 312
Target Start/End: Complemental strand, 38064047 - 38063910
Alignment:
Q  175 tatatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgac 274  Q
    ||||||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38064047 tatatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 38063948  T
Q  275 ataaaattctcttataaataggatcggagggagtatta 312  Q
      ||||||||||||||||||||| | ||||||||||||    
T  38063947 ccaaaattctcttataaataggaccagagggagtatta 38063910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 178 - 309
Target Start/End: Original strand, 46840859 - 46840990
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  46840859 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 46840958  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||| |||||||||||    
T  46840959 aaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 193 - 310
Target Start/End: Original strand, 9268770 - 9268887
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  9268770 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaa 9268869  T
Q  293 taggatcggagggagtat 310  Q
    ||||| ||||||||||||    
T  9268870 taggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 179 - 309
Target Start/End: Complemental strand, 23314269 - 23314139
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||    
T  23314269 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaa 23314170  T
Q  279 aattctcttataaataggatcggagggagta 309  Q
    ||||||||||||||||||| |||||||||||    
T  23314169 aattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 179 - 309
Target Start/End: Complemental strand, 31319529 - 31319399
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  31319529 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 31319430  T
Q  279 aattctcttataaataggatcggagggagta 309  Q
    ||||||||||||||||| | |||||||||||    
T  31319429 aattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 178 - 310
Target Start/End: Complemental strand, 1565860 - 1565728
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  1565860 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 1565761  T
Q  278 aaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||| | || |||||||||    
T  1565760 aaattctcttataaatagaaccgaagggagtat 1565728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 22285713 - 22285829
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  22285713 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaa 22285812  T
Q  293 taggatcggagggagta 309  Q
    ||||| |||||||||||    
T  22285813 taggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 178 - 318
Target Start/End: Complemental strand, 28536882 - 28536742
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||   |    
T  28536882 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggaatgaatttttaactagatacatcaacttttattgatcca 28536783  T
Q  278 aaattctcttataaataggatcggagggagtattatttatt 318  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  28536782 aaattctcttataaataggaccggagggagtatcatttatt 28536742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 178 - 310
Target Start/End: Original strand, 4790247 - 4790379
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||| |||||  |    
T  4790247 atactacctccggtcctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactaaatttttaactagatacatcaacttttattgaccca 4790346  T
Q  278 aaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||||| |||||| |||||    
T  4790347 aaattctcttataaataggaccggaggaagtat 4790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 179 - 309
Target Start/End: Original strand, 38441460 - 38441590
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  ||    
T  38441460 tactacctccggtcctatttataagagaaatttatgtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaa 38441559  T
Q  279 aattctcttataaataggatcggagggagta 309  Q
    ||||||||||||||||||| |||||| ||||    
T  38441560 aattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 496 - 780
Target Start/End: Original strand, 28106362 - 28106656
Alignment:
Q  496 cattgctcagttgaaggaaggtgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtca 595  Q
    ||||||||||||||| | |  ||||||||||||||| |||||||||  ||||||||||||||| |||||| ||||||||||  || ||||||||||||||    
T  28106362 cattgctcagttgaaaggatatgatcttcagaagaaagatgatatacactttcaacaaatttgatcgtgtgataatcttgcaaactttttcacaaagtca 28106461  T
Q  596 ctcccaagcataattttttaacaaccgatacaaaatattgatc----ttgtctcggagatgattatttgattgagggggag----atatatagtttgcac 687  Q
    ||||||| |||||||||  ||||||| || ||||| |||| ||    ||||||  ||||||||| |||| |||| ||||||    | |||||  |||||     
T  28106462 ctcccaaacataattttaaaacaaccaatccaaaaaattggtcttcattgtcttagagatgattgtttggttgaaggggagacataaatatatcttgcat 28106561  T
Q  688 tctttttcccttcac--tggttttgtcccattgaatttttgtggtaaagtttttaatgagatagatatactggatattgtactctttttccttca 780  Q
    | |||||||||||||  | ||||||||||| | ||||||| ||||||| ||||||| |||| |  |||| || |||||||||| |||||||||||    
T  28106562 tgtttttcccttcaccatagttttgtcccactaaatttttctggtaaaatttttaacgagacatgtatattgaatattgtactttttttccttca 28106656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 193 - 297
Target Start/End: Complemental strand, 36016312 - 36016208
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  36016312 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaa 36016213  T
Q  293 tagga 297  Q
    |||||    
T  36016212 tagga 36016208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 195 - 303
Target Start/End: Original strand, 33418392 - 33418500
Alignment:
Q  195 atttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaata 294  Q
    |||| ||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  33418392 atttttaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaata 33418491  T
Q  295 ggatcggag 303  Q
    ||| |||||    
T  33418492 ggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 521 - 782
Target Start/End: Complemental strand, 14997947 - 14997678
Alignment:
Q  521 cttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaagcataattttttaacaac 620  Q
    ||||| |||||||||||||||| |  ||||||||||||||| ||| |||||||||| ||  ||||||||||||||| |||||| ||||||||| ||||||    
T  14997947 cttcaaaagaatgatgatataaacggtcaacaaatttgttcatgtgataatcttgcagattttttcacaaagtcac-cccaagaataatttttgaacaac 14997849  T
Q  621 cgatacaaaatattgatctt----gtctcggagatgattatttgattgagggggagat----atatagtttgcactctttttcccttca--ctggttttg 710  Q
      |||||||| |||||  ||     |||| ||||||||| ||||||||||||||||||    ||||| |||||||||||||| ||||||   |||||||     
T  14997848 aaatacaaaacattgactttcatcatctcagagatgatt-tttgattgagggggagatatgaatatattttgcactcttttttccttcagcatggttttc 14997750  T
Q  711 tcccattgaatttttgtggtaaagtttttaatgagatagatatactggatattgtactctttttccttcact 782  Q
    ||||||| | ||||  |||||| ||||||||  ||  | ||||| ||||||||||||||||||||| |||||    
T  14997749 tcccattcagttttcatggtaaggtttttaacaaggcatatatattggatattgtactctttttccctcact 14997678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 308 - 510
Target Start/End: Complemental strand, 8049786 - 8049581
Alignment:
Q  308 tattatttattactttgatatattagaaatgtaggttatttgtgtgatgctcata-tgaaattttagcactacataaagaaagtcgagaatgtgtttagt 406  Q
    |||||| | |||||||| ||||||| ||||  |  |||||||||||||||||||| | |||||||||||||||||||| |||||  | ||||||||| ||    
T  8049786 tattatctgttactttgttatattataaatacaatttatttgtgtgatgctcataataaaattttagcactacataaaaaaagtaaaaaatgtgtttggt 8049687  T
Q  407 tgaggtcaatgattgaacacatagaagaaacatg-caattgtcttctgaaatagtgaatgaaacaaacctttat-aacatgataccaggtgcattgctca 504  Q
    |||   | ||||| ||||||||||||||||| ||    |||||||| ||||||||||||||||||| | ||||| || ||||||||| ||||||||||||    
T  8049686 tgatacctatgatcgaacacatagaagaaacttgtggtttgtcttccgaaatagtgaatgaaacaatcatttataaatatgataccatgtgcattgctca 8049587  T
Q  505 gttgaa 510  Q
    ||||||    
T  8049586 gttgaa 8049581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 550 - 786
Target Start/End: Original strand, 20362330 - 20362576
Alignment:
Q  550 acaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaagcataattttttaacaaccgatacaaaatattgatcttg----tctc 645  Q
    |||||||||||| ||| |||||||| |  |||||||||||||||||||||| || ||||||||| | ||||  |||||||||| |||||||     ||||    
T  20362330 acaaatttgttcatgtaataatcttccataccttttcacaaagtcactcccgagtataatttttgagcaactaatacaaaataatgatcttcatcctctc 20362429  T
Q  646 ggagatgattatttgattgagggggagatata----tagtttgcactctttttcccttcac--tggttttgtcccattgaatttttgtggtaaagttttt 739  Q
      | |||||| ||||||||||||||| |||||    || |||||||||||||| || ||||  ||||||| ||||  || |||||| |||||| ||||||    
T  20362430 ataaatgattgtttgattgagggggaaatataaatatattttgcactcttttttccatcaccatggttttttccccatggatttttctggtaaggttttt 20362529  T
Q  740 aatgagatagatatactggatattgtactctttttccttcactaaga 786  Q
    |||||   |||||||  |||||||||||||||||| |||||||||||    
T  20362530 aatgaagcagatatatcggatattgtactcttttttcttcactaaga 20362576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 380 - 715
Target Start/End: Original strand, 42129001 - 42129343
Alignment:
Q  380 ataaagaaagtcgagaatgtgtttagttgaggtcaatgattgaacacatagaagaaacatgca-attgtcttctgaaatagtgaatgaaacaaaccttta 478  Q
    |||||||||||||||||||||||| ||||||||| | ||||||| ||||| |||||||||| |  ||||||| || || ||||||||||| || | ||||    
T  42129001 ataaagaaagtcgagaatgtgtttggttgaggtctacgattgaatacataaaagaaacatgtagtttgtcttttggaagagtgaatgaaataatcattta 42129100  T
Q  479 t-aacatgataccaggtgcattgctcagttgaaggaaggtgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgct 577  Q
    | || ||| |||||  ||||||  | ||||||| | | |||||||| |||||||||||||||||| |  |||||| |||||||  ||| ||||| |||      
T  42129101 tgaatatggtaccatatgcattatttagttgaaaggatgtgatcttaagaagaatgatgatataaaccgtcaacatatttgttaatgtgataattttgta 42129200  T
Q  578 ga-ccttttcacaaagtcactcccaagcataattttttaacaaccgatacaaaatattgatctt----gtctcggagatgattatttgattgagggggag 672  Q
    || | ||||||||||| ||| | ||| | |||||||| ||||    |||||||| | |||||||    |||    |||||||| |||| ||||||||||     
T  42129201 gatctttttcacaaaggcaccctcaatcgtaatttttgaacagataatacaaaagaatgatcttcatcgtcctaaagatgattgtttggttgagggggat 42129300  T
Q  673 atatatagtttgcactctttttcccttcac--tggttttgtccca 715  Q
    |||||||  |||||||||||||||||||||  |||||||||||||    
T  42129301 atatata--ttgcactctttttcccttcaccatggttttgtccca 42129343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 9575423 - 9575539
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||| ||||| ||| || ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||  ||  ||||||||||||    
T  9575423 ctatttgtaagagaaagttgggtcaacaaaagttaacgtatttagactgaatttttaactagatacatcaagttttgttgaccaaactttctcttataaa 9575522  T
Q  293 taggatcggagggagta 309  Q
    ||||| || ||||||||    
T  9575523 taggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 179 - 302
Target Start/End: Complemental strand, 40840249 - 40840126
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    |||| ||||| || ||||||| |||| ||| ||| || ||||||| | ||||||||| |||||||||||||||||  |||||||||||||||||||| ||    
T  40840249 tactctctccggtcctatttagaagagaaagttaagttaacaaaaatcaatgtatttggactgaatttttaactaagtacatcaacttttgttgacaaaa 40840150  T
Q  279 aattctcttataaataggatcgga 302  Q
    | ||||||||||||||||| ||||    
T  40840149 atttctcttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 517 - 630
Target Start/End: Complemental strand, 14719800 - 14719687
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaagcataattttttaa 616  Q
    ||||||| ||||||||| |||||||||| ||||||||||| |||| ||| |||||||||| ||  |||||||||||||| ||||||||| | ||||| ||    
T  14719800 tgatctttagaagaatggtgatataagcattcaacaaattcgttcttgtaataatcttgcagatattttcacaaagtcagtcccaagcagagtttttgaa 14719701  T
Q  617 caaccgatacaaaa 630  Q
    |||| |||||||||    
T  14719700 caactgatacaaaa 14719687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 534 - 677
Target Start/End: Complemental strand, 8049465 - 8049318
Alignment:
Q  534 atgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaagcataattttttaacaaccgatacaaaatat 633  Q
    |||||||||||  ||||||||||||||||| | ||||||||||  |||||| || |||||||||| |||| |||| |||| |||||| |||| ||||||     
T  8049465 atgatataagcagtcaacaaatttgttcgtatgataatcttgcatacctttacaaaaagtcactcacaagaataacttttgaacaactgatataaaataa 8049366  T
Q  634 tgatctt----gtctcggagatgattatttgattgagggggagatata 677  Q
    |||| ||    ||||| |||||||||  ||||||||||||||||||||    
T  8049365 tgattttcatcgtctctgagatgattgattgattgagggggagatata 8049318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 193 - 310
Target Start/End: Complemental strand, 7661192 - 7661075
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    ||||||||| || | |||| |||||||||||||  |||||| ||| |  | ||||| || || ||||||||||||| |||||||||| ||||||||||||    
T  7661192 ctatttatatgagacatttgggtcaacaaaagttgatgtatctagtccaatttttttaccagctacatcaacttttattgacataaatttctcttataaa 7661093  T
Q  293 taggatcggagggagtat 310  Q
    |||||||| |||||||||    
T  7661092 taggatcgaagggagtat 7661075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 7269520 - 7269412
Alignment:
Q  194 tatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaat 293  Q
    ||||||||||||||| || ||||||||||| |  |||||| || |||||||||||||| |||| |||||||||||||| ||  ||  |||||||||||||    
T  7269520 tatttataagaaaaagttgggtcaacaaaaattgatgtatctaaactgaatttttaaccagatgcatcaacttttgttaacccaactttctcttataaat 7269421  T
Q  294 aggatcgga 302  Q
    |||| ||||    
T  7269420 aggaccgga 7269412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 517 - 603
Target Start/End: Original strand, 29185167 - 29185253
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||||||||| |||||||||| ||| ||||||||||| | |||||| |||||||||| ||  |||| |||||||| ||||||||    
T  29185167 tgatcttcagaaggatgatgatatcagcattcaacaaattcggtcgtgtgataatcttgcagatgtttttacaaagtcgctcccaag 29185253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 22285745 - 22285695
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattat 313  Q
    |||||||||||| |||| ||||||||||||||||| |||||||||||||||    
T  22285745 acttttgttgacctaaatttctcttataaataggaccggagggagtattat 22285695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 603
Target Start/End: Complemental strand, 25830904 - 25830818
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||||||||||||| |||||| | | ||||||||||  |||||||| ||||||||||  |  |||| |||||||||||||||||    
T  25830904 tgatcttcagaagaatggtgatatcaacattcaacaaatccgttcgtgtgataatcttgcaaatgtttttacaaagtcactcccaag 25830818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 1738531 - 1738582
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattatt 314  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||||||    
T  1738531 acttttgttgacctaaatttctcttataaataggaccggaggtagtattatt 1738582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 281 - 316
Target Start/End: Original strand, 3411453 - 3411488
Alignment:
Q  281 ttctcttataaataggatcggagggagtattattta 316  Q
    ||||||||||||||||||||||||||||||||||||    
T  3411453 ttctcttataaataggatcggagggagtattattta 3411488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 7240795 - 7240745
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattat 313  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||||    
T  7240795 acttttgttgacctaaatttctcttataaataggaccggaggtagtattat 7240745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 36016280 - 36016326
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||||||||    
T  36016280 acttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 38441506 - 38441460
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    ||||||||||||||||| ||||||||||||||||| |||||| ||||    
T  38441506 acttttgttgacataaatttctcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 1565813 - 1565861
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  1565813 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 1565861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 7482271 - 7482219
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattattt 315  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||| ||||    
T  7482271 acttttgttgacctaaatttctcttataaataggaccggaggtagtataattt 7482219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 7661147 - 7661207
Alignment:
Q  250 actagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||||||||||  |||  |||| ||||||||||| | ||||||||||    
T  7661147 actagatacatcaacttttgttgacccaaatgtctcatataaataggaccagagggagtat 7661207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 46840906 - 46840858
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  46840906 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 46840858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 28536835 - 28536882
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  28536835 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 36583441 - 36583386
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattatttatt 318  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||| | ||||||    
T  36583441 acttttgttgacctaaatttctcttataaataggaccggaggtagtactttttatt 36583386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 38063997 - 38064044
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  38063997 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 9268802 - 9268752
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattat 313  Q
    |||||||||||| |||| ||||||||||||||||| | |||| ||||||||    
T  9268802 acttttgttgacctaaatttctcttataaataggaccagaggtagtattat 9268752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 23314223 - 23314269
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  23314223 acttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 31319483 - 31319529
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  31319483 acttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 36033295 - 36033241
Alignment:
Q  240 tgaatttttaactagatacatcaacttttgttgacataaaattctcttataaata 294  Q
    ||||||||| |  |||||||||||||||||||||| |||| || |||||||||||    
T  36033295 tgaatttttgatcagatacatcaacttttgttgacctaaatttatcttataaata 36033241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 800 - 837
Target Start/End: Original strand, 34326292 - 34326329
Alignment:
Q  800 ggagtgttatgaatatataaattaatggatgtccatct 837  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  34326292 ggagtgttatgaatatatatattagtggatgtccatct 34326329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 2e-60; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 312 - 540
Target Start/End: Original strand, 27317057 - 27317287
Alignment:
Q  312 atttattactttgatatattagaaatgtaggttatttgtgtgatgctcatatgaaattttagcactacataaagaaagtcgagaatgtgtttagttgagg 411  Q
    |||| |||||||| ||||||||||||| || || ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||    
T  27317057 atttgttactttgttatattagaaatgcagattgtttgtgtgatgctcatatgaaattttagcactacatatagaaagttgagaatgtgtttggttgagg 27317156  T
Q  412 tcaatgattgaacacatagaagaaacatgcaa-ttgtcttctgaaatagtgaatgaaacaaacctttat-aacatgataccaggtgcattgctcagttga 509  Q
    || ||| ||||||||||||||||||| || || |||||||| | || |||||||||||||| | ||||| || ||||||||| ||||||| |||||||||    
T  27317157 tctatggttgaacacatagaagaaacttgaaatttgtcttcaggaagagtgaatgaaacaatcttttatgaatatgataccatgtgcatttctcagttga 27317256  T
Q  510 aggaaggtgatcttcagaagaatgatgatat 540  Q
    | |||||| ||||||| ||||||| ||||||    
T  27317257 aagaaggtaatcttcataagaatgttgatat 27317287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 178 - 312
Target Start/End: Original strand, 14984836 - 14984970
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    ||||||||||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  14984836 atactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 14984935  T
Q  278 aaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||||||||||| ||||||||||||||    
T  14984936 aaattctcttataaataggaccggagggagtatta 14984970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 175 - 315
Target Start/End: Original strand, 9981643 - 9981783
Alignment:
Q  175 tatatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgac 274  Q
    ||||||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9981643 tatatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 9981742  T
Q  275 ataaaattctcttataaataggatcggagggagtattattt 315  Q
      ||||||||||||||||||||| |||||||| ||||||||    
T  9981743 ccaaaattctcttataaataggaccggagggaatattattt 9981783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 179 - 303
Target Start/End: Complemental strand, 44955336 - 44955212
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  44955336 tactacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacctaa 44955237  T
Q  279 aattctcttataaataggatcggag 303  Q
    ||||||||||||||||||| |||||    
T  44955236 aattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 27159489 - 27159358
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  27159489 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 27159390  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||| |||||||||||    
T  27159389 aaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 44668224 - 44668093
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  44668224 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 44668125  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||| |||||||||||    
T  44668124 aaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 178 - 312
Target Start/End: Complemental strand, 12483759 - 12483625
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||  |    
T  12483759 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaattttgaactaaatacatcaacttttgttgaccca 12483660  T
Q  278 aaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||||||||||| ||||||||||||||    
T  12483659 aaattctcttataaataggaccggagggagtatta 12483625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 179 - 309
Target Start/End: Complemental strand, 31842925 - 31842795
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  31842925 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 31842826  T
Q  279 aattctcttataaataggatcggagggagta 309  Q
    ||||||||||||||||||| |||||||||||    
T  31842825 aattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 179 - 309
Target Start/End: Complemental strand, 39402096 - 39401966
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  39402096 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 39401997  T
Q  279 aattctcttataaataggatcggagggagta 309  Q
    ||||||||||||||||||| |||||||||||    
T  39401996 aattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 168 - 309
Target Start/End: Original strand, 11795922 - 11796063
Alignment:
Q  168 tgataactatatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttt 267  Q
    |||||| || |||||| |||| || |||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  11795922 tgataattaaatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatcaacttt 11796021  T
Q  268 tgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||  ||||||||||||||||||||| |||||||||||    
T  11796022 tgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 26471196 - 26471065
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   |    
T  26471196 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatcca 26471097  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||| |||||||||||    
T  26471096 aaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 47216829 - 47216698
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  47216829 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 47216730  T
Q  279 aattctcttataaataggatcggagggagtat 310  Q
    ||||||||||||||||| | ||||||||||||    
T  47216729 aattctcttataaatagtaccggagggagtat 47216698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 177 - 311
Target Start/End: Original strand, 34042694 - 34042828
Alignment:
Q  177 tatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacat 276  Q
    ||||||| |||| || |||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||      
T  34042694 tatactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 34042793  T
Q  277 aaaattctcttataaataggatcggagggagtatt 311  Q
    ||||||||||||||||||| | |||||||||||||    
T  34042794 aaaattctcttataaatagaaccggagggagtatt 34042828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 179 - 316
Target Start/End: Original strand, 1050888 - 1051025
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||  ||    
T  1050888 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatcaactttagttgacccaa 1050987  T
Q  279 aattctcttataaataggatcggagggagtattattta 316  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  1050988 aattctcttataaataggaccggagggagtatttttta 1051025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 193 - 309
Target Start/End: Complemental strand, 47777597 - 47777481
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||    
T  47777597 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgacccaaaattctcttataaa 47777498  T
Q  293 taggatcggagggagta 309  Q
    ||||| |||||||||||    
T  47777497 taggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 483 - 640
Target Start/End: Complemental strand, 27418000 - 27417843
Alignment:
Q  483 atgataccaggtgcattgctcagttgaaggaaggtgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgacct 582  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||||||||||| ||||| |  || |||||||||||  ||| |||||||| | |||||    
T  27418000 atgataccatgtgcattactcagttgaaagaaggtgatcttcagaagaatgatgctataaccagtctacaaatttgtttatgtgataatcttccagacct 27417901  T
Q  583 tttcacaaagtcactcccaagcataattttttaacaaccgatacaaaatattgatctt 640  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||||||| |||||||    
T  27417900 tttcacaaagtcacccccaagcataatttttgaacaacggatacaaaataatgatctt 27417843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 193 - 310
Target Start/End: Original strand, 25694333 - 25694450
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||| |||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  25694333 ctatttataagagaaatttagatcaataaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaa 25694432  T
Q  293 taggatcggagggagtat 310  Q
    ||||| ||||||||||||    
T  25694433 taggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 179 - 315
Target Start/End: Original strand, 47969694 - 47969831
Alignment:
Q  179 tactatctccagttctatttataa-gaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||| ||||| || |||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |    
T  47969694 tactctctccggtcctatttataaagagaaatttaggtcaacaaaagtaaatgtatttagactgaatttttaactagatacatcaacttttgttgatcca 47969793  T
Q  278 aaattctcttataaataggatcggagggagtattattt 315  Q
    ||||| | |||||||||||| |||||||||||||||||    
T  47969794 aaattattttataaataggaccggagggagtattattt 47969831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 194 - 312
Target Start/End: Complemental strand, 47588452 - 47588334
Alignment:
Q  194 tatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaat 293  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  47588452 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaat 47588353  T
Q  294 aggatcggagggagtatta 312  Q
    |  | || |||||||||||    
T  47588352 aaaaccgaagggagtatta 47588334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 23278131 - 23278021
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  23278131 tactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 23278032  T
Q  279 aattctcttat 289  Q
    |||||||||||    
T  23278031 aattctcttat 23278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 193 - 310
Target Start/End: Original strand, 17556766 - 17556884
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaa-tgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataa 291  Q
    |||||||||||| ||| |||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||  ||  |||||||||||    
T  17556766 ctatttataagagaaagttaggtcaacaaaagttaaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctcttataa 17556865  T
Q  292 ataggatcggagggagtat 310  Q
    |||||| ||||||||||||    
T  17556866 ataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 193 - 311
Target Start/End: Original strand, 11897068 - 11897186
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| ||| ||||||||||||||||  |||||| |  ||||||||||||||  |||||||||||||||||||||  ||| ||||||||||||    
T  11897068 ctatttataagagaaagttaggtcaacaaaagttgatgtatctgaactgaatttttaaccggatacatcaacttttgttgacccaaatttctcttataaa 11897167  T
Q  293 taggatcggagggagtatt 311  Q
    ||||| |||||||||||||    
T  11897168 taggaccggagggagtatt 11897186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 12213607 - 12213486
Alignment:
Q  176 atatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgaca 275  Q
    |||||||  |||||||  ||||||||||| ||  |||||||||||||| | |||||||||||| |||||||||||||| ||| ||||| ||||||||||     
T  12213607 atatactccctccagtcttatttataagagaatgttaggtcaacaaaaattaatgtatttagattgaatttttaactaaataaatcaatttttgttgacc 12213508  T
Q  276 taaaattctcttataaatagga 297  Q
     ||  |||||| ||||||||||    
T  12213507 caagtttctctaataaatagga 12213486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 321 - 420
Target Start/End: Complemental strand, 27418135 - 27418035
Alignment:
Q  321 tttgatatattagaaatgtaggttatttgtgtgatgctcata-tgaaattttagcactacataaagaaagtcgagaatgtgtttagttgaggtcaatgat 419  Q
    |||| ||||||||||||| | ||||||||||||||||||||| || || || | || |||||||||||||| |||||||||||| ||||||||| |||||    
T  27418135 tttgttatattagaaatgcatgttatttgtgtgatgctcataatggaacttcatcattacataaagaaagttgagaatgtgtttggttgaggtctatgat 27418036  T
Q  420 t 420  Q
    |    
T  27418035 t 27418035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 11989796 - 11989911
Alignment:
Q  194 tatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaat 293  Q
    ||||||||||| ||| || |||||||||||   ||| ||||| ||||||||||||||| | ||||||||| |||| |||||  ||| |||| ||||||||    
T  11989796 tatttataagagaaagttgggtcaacaaaaactaatatatttggactgaatttttaaccaaatacatcaatttttattgactcaaatttcttttataaat 11989895  T
Q  294 aggatcggagggagta 309  Q
    |||| |||||||||||    
T  11989896 aggaccggagggagta 11989911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 193 - 310
Target Start/End: Original strand, 37552155 - 37552272
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| ||| ||  |||||||| |||  |||||| | ||||||||||||||| ||||||||  | ||||||||||  ||| ||||||||||||    
T  37552155 ctatttataagataaagttgagtcaacaacagttcatgtatctggactgaatttttaaccagatacattcatttttgttgacccaaatttctcttataaa 37552254  T
Q  293 taggatcggagggagtat 310  Q
    ||||| ||| ||||||||    
T  37552255 taggaccggggggagtat 37552272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 193 - 309
Target Start/End: Complemental strand, 16448224 - 16448108
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| ||| || |||||||||||||  |||||| | ||||||||||| ||| |||||||| |||||||||||||  || |||| | ||||||    
T  16448224 ctatttataagagaaagttgggtcaacaaaagttgatgtatctggactgaattttgaaccagatacataaacttttgttgacccaatattcccctataaa 16448125  T
Q  293 taggatcggagggagta 309  Q
    || || ||||| |||||    
T  16448124 taagaccggagtgagta 16448108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 11897110 - 11897047
Alignment:
Q  253 agatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtattattta 316  Q
    |||||||||||||||||||||| |||  ||||||||||||||||| |||||||||||| |||||    
T  11897110 agatacatcaacttttgttgacctaactttctcttataaataggaccggagggagtatcattta 11897047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 571542 - 571637
Alignment:
Q  213 ggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    ||||||||||||| | ||||||||||||||||||| |||||| ||||| ||||||||||||   || |||||| |||||||| ||| | ||||||||    
T  571542 ggtcaacaaaagtta-tgtatttagactgaattttgaactaggtacattaacttttgttgatcaaatattctcctataaataagatggaagggagta 571637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 603
Target Start/End: Original strand, 28518916 - 28519002
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||||||||| ||| |||||| ||| ||||||||||| | |||||| |||||||||| ||  |||| |||||||| ||||||||    
T  28518916 tgatcttcagaaggatggtgatatcagcattcaacaaattcggtcgtgtgataatcttgcagatgtttttacaaagtcgctcccaag 28519002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 603
Target Start/End: Original strand, 38990742 - 38990828
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||||||||| ||| |||||| ||| ||||||||||| | |||||| |||||||||| ||  |||| |||||||| ||||||||    
T  38990742 tgatcttcagaaggatggtgatatcagcattcaacaaattcggtcgtgtgataatcttgcagatgtttttacaaagtcgctcccaag 38990828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 12043618 - 12043726
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||| | | ||||| ||||||||||||  |||||||| || | |||||||||| |||||||| || |||||||||  |||| || |||||||||    
T  12043618 ctatttataaaagatatttaagtcaacaaaagttgatgtattt-gattcaatttttaacaagatacattaatttttgttgatttaaatttttcttataaa 12043716  T
Q  293 taggatcgga 302  Q
    ||||| ||||    
T  12043717 taggaccgga 12043726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 16448182 - 16448239
Alignment:
Q  253 agatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    ||||||||||||||||||||||  ||  ||||||||||||||||| ||||||||||||    
T  16448182 agatacatcaacttttgttgacccaactttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 556 - 639
Target Start/End: Original strand, 27317287 - 27317373
Alignment:
Q  556 ttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaa---gcataattttttaacaaccgatacaaaatattgatct 639  Q
    ||||| |||| |||||||| | ||| |||||||||||||||| ||||   ||||||||||| |||||| |||| |||||||||||||    
T  27317287 ttgtttgtgtgataatcttccagacattttcacaaagtcacttccaacaagcataatttttgaacaactgatataaaatattgatct 27317373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 228 - 311
Target Start/End: Complemental strand, 1598461 - 1598380
Alignment:
Q  228 atgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||| ||||||||||||||| | ||||||||| ||||||||||  | | |||||||||||||||||||||| || |||||    
T  1598461 atgtatttggactgaatttttaac-atatacatcaatttttgttgacc-atatttctcttataaataggatcggatggggtatt 1598380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 12483642 - 12483761
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| || ||| |||||||||||||  ||||||||||    || ||    ||| ||||||  |||||||||||| |||| ||||||||||||    
T  12483642 ctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaa 12483741  T
Q  293 taggatcggagggagtatta 312  Q
    ||||| |||||| |||||||    
T  12483742 taggaccggaggtagtatta 12483761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 40676804 - 40676919
Alignment:
Q  194 tatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaat 293  Q
    ||||||||||||| |||| ||||||||||| || |||||||||| |  | || ||||  | |||||| |||||||||||||  ||| || | ||||||||    
T  40676804 tatttataagaaacattttggtcaacaaaaatggatgtatttagtccaatttgttaatcatatacattaacttttgttgactgaaatttttgttataaat 40676903  T
Q  294 aggatcggagggagta 309  Q
    ||||||| | ||||||    
T  40676904 aggatcgaatggagta 40676919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 258 - 312
Target Start/End: Complemental strand, 5392198 - 5392144
Alignment:
Q  258 catcaacttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    |||||| ||||||||||| |||  |||||||||||||||||||||| ||||||||    
T  5392198 catcaatttttgttgacacaaatgtctcttataaataggatcggagtgagtatta 5392144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 21537943 - 21538001
Alignment:
Q  253 agatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    ||||||||||||||||||||||  ||  |||||||||||||| |||||||| |||||||    
T  21537943 agatacatcaacttttgttgactcaattttctcttataaataagatcggagagagtatt 21538001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 27159442 - 27159492
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattat 313  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||||    
T  27159442 acttttgttgacctaaatttctcttataaataggaccggaggtagtattat 27159492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 44668177 - 44668227
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattat 313  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||||    
T  44668177 acttttgttgacctaaatttctcttataaataggaccggaggtagtattat 44668227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 11774544 - 11774605
Alignment:
Q  210 ttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgtt 271  Q
    |||||||||||||| |  ||||| ||| |||||||||| |||||||||| ||||||||||||    
T  11774544 ttaggtcaacaaaaattgatgtaattaaactgaattttgaactagatacgtcaacttttgtt 11774605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 26471149 - 26471198
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||||    
T  26471149 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 26471198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 11795979 - 11795931
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  11795979 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 11795931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 214 - 310
Target Start/End: Original strand, 30800460 - 30800556
Alignment:
Q  214 gtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    ||||||||||||  |||||| || |||||||||| ||  ||||||||||||||||||| ||  ||  ||||| | |||||| ||||| |||||||||    
T  30800460 gtcaacaaaagttgatgtatctatactgaattttgaatcagatacatcaacttttgttaacccaacgttctcatgtaaataagatcgaagggagtat 30800556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 315
Target Start/End: Original strand, 5392211 - 5392282
Alignment:
Q  244 tttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtattattt 315  Q
    |||||||| | |||||||||||||| ||||| |||| |||||||||| || ||| || || |||||||||||    
T  5392211 tttttaaccaaatacatcaacttttattgacctaaatttctcttatatattggaccgaagagagtattattt 5392282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 9981693 - 9981646
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  9981693 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 9981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 31748352 - 31748423
Alignment:
Q  200 taagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgtt 271  Q
    |||| ||||||||| ||||||||| || || ||||||| || |||||| ||| ||||| |||||||||||||    
T  31748352 taagtaaaatttagatcaacaaaaatgtatatatttagtctaaattttaaacaagatatatcaacttttgtt 31748423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 1050934 - 1050888
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  1050934 acttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 25694365 - 25694315
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattat 313  Q
    |||||| ||||  |||| ||||||||||||||||||| |||||||||||||    
T  25694365 acttttattgatctaaatttctcttataaataggatcagagggagtattat 25694315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 31842879 - 31842925
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  31842879 acttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 39402050 - 39402096
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  39402050 acttttgttgacctaaatttctcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 47216783 - 47216829
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  47216783 acttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 12043658 - 12043613
Alignment:
Q  255 atacatcaacttttgttgacataaaattctcttataaataggatcg 300  Q
    |||||||||||||||||||| ||||  ||| |||||||||||||||    
T  12043658 atacatcaacttttgttgacttaaatatcttttataaataggatcg 12043613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 741
Target Start/End: Original strand, 16168578 - 16168638
Alignment:
Q  683 tgcactctttttcccttcac--tggttttgtcccattgaatttttgtggtaaagtttttaa 741  Q
    ||||||||||||||||| ||  ||||||| ||||||||| ||||| |||||| ||||||||    
T  16168578 tgcactctttttcccttaaccatggttttatcccattgagtttttctggtaatgtttttaa 16168638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 741
Target Start/End: Complemental strand, 18535326 - 18535266
Alignment:
Q  683 tgcactctttttcccttcac--tggttttgtcccattgaatttttgtggtaaagtttttaa 741  Q
    ||||||||||||||||| ||  ||||||||||||||||| ||||  |||||| ||||||||    
T  18535326 tgcactctttttcccttaaccatggttttgtcccattgagttttcctggtaaggtttttaa 18535266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 34042740 - 34042695
Alignment:
Q  265 ttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||| |||| ||||||||||||||||| |||||| |||||    
T  34042740 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 34042695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 38791239 - 38791287
Alignment:
Q  255 atacatcaacttttgttgacataaaattctcttataaataggatcggagg 304  Q
    |||||| || |||||||||| ||||| |||||||||||||||||||||||    
T  38791239 atacattaatttttgttgac-taaaaatctcttataaataggatcggagg 38791287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 3e-53; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 193 - 319
Target Start/End: Original strand, 13033065 - 13033191
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  13033065 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaa 13033164  T
Q  293 taggatcggagggagtattatttatta 319  Q
    |||||||||||||||||||||||||||    
T  13033165 taggatcggagggagtattatttatta 13033191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 179 - 316
Target Start/End: Original strand, 9395350 - 9395487
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  9395350 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 9395449  T
Q  279 aattctcttataaataggatcggagggagtattattta 316  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  9395450 aattctcttataaataggaccggagggagtattattta 9395487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 193 - 319
Target Start/End: Original strand, 13103038 - 13103164
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  13103038 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaa 13103137  T
Q  293 taggatcggagggagtattatttatta 319  Q
    ||||| |||||||||||||||||||||    
T  13103138 taggaccggagggagtattatttatta 13103164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 193 - 316
Target Start/End: Complemental strand, 36563654 - 36563531
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  36563654 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaa 36563555  T
Q  293 taggatcggagggagtattattta 316  Q
    ||||| |||||||||||| |||||    
T  36563554 taggaccggagggagtatgattta 36563531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 178 - 311
Target Start/End: Complemental strand, 41989538 - 41989405
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  41989538 atactacctccggtcctatttgtaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 41989439  T
Q  278 aaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||||||||||| |||||||||||||    
T  41989438 aaattctcttataaataggaccggagggagtatt 41989405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 178 - 310
Target Start/End: Original strand, 17025623 - 17025755
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |    
T  17025623 atactacctccggtcctatttataagagaaatttaggtccacaaaagtgaatgtatttaaactgaatttttaactagatacatcaacttttgttgaccca 17025722  T
Q  278 aaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||||| ||||||||||||    
T  17025723 aaattctcttataaataggaccggagggagtat 17025755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 37149086 - 37148955
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  37149086 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 37148987  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    ||||||| |||||||||||| |||||||||||    
T  37148986 aaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 193 - 310
Target Start/End: Original strand, 11795182 - 11795299
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  11795182 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaa 11795281  T
Q  293 taggatcggagggagtat 310  Q
    |||||  |||||||||||    
T  11795282 taggactggagggagtat 11795299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 23359956 - 23360072
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  23359956 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaa 23360055  T
Q  293 taggatcggagggagta 309  Q
    ||||| |||||| ||||    
T  23360056 taggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 193 - 306
Target Start/End: Original strand, 4443974 - 4444087
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  4443974 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaaatagatacatcaacttttgttgatctaaaattctcttataaa 4444073  T
Q  293 taggatcggaggga 306  Q
    || || ||||||||    
T  4444074 taagaccggaggga 4444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 193 - 318
Target Start/End: Complemental strand, 26350466 - 26350341
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||   |||||||| |||||||    
T  26350466 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgattcaaaattcttttataaa 26350367  T
Q  293 taggatcggagggagtattatttatt 318  Q
    ||||| ||||||||||||| ||||||    
T  26350366 taggaccggagggagtattctttatt 26350341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 178 - 309
Target Start/End: Original strand, 582988 - 583118
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  582988 atactacctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 583087  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    ||||||| ||||  ||||||||||||||||||    
T  583088 aaattcttttat-tataggatcggagggagta 583118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 178 - 309
Target Start/End: Original strand, 20848073 - 20848203
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |  |    
T  20848073 atactacctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttg-ccca 20848171  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||| |||||||||||    
T  20848172 aaattctcttataaataggaccggagggagta 20848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 178 - 310
Target Start/End: Original strand, 37641952 - 37642085
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaa-gtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacat 276  Q
    |||||| |||| || |||||||||||| ||||||||||||| |||| |||||||||| | |||||||||||||||||||||||||||||||| |||||      
T  37641952 atactacctccggtcctatttataagagaaatttaggtcaataaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttattgaccc 37642051  T
Q  277 aaaattctcttataaataggatcggagggagtat 310  Q
    ||||||||||||||||||||| ||||||||||||    
T  37642052 aaaattctcttataaataggaccggagggagtat 37642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 206 - 310
Target Start/End: Original strand, 21575973 - 21576077
Alignment:
Q  206 aaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggaggg 305  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||   ||||||||||||||||||||| |||||||    
T  21575973 aaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgatccaaaattctcttataaataggaccggaggg 21576072  T
Q  306 agtat 310  Q
    |||||    
T  21576073 agtat 21576077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 200 - 309
Target Start/End: Original strand, 6126845 - 6126954
Alignment:
Q  200 taagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatc 299  Q
    ||||| |||||||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |    
T  6126845 taagagaaatttagatcaacaaaaatgaatgtatttggactaaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 6126944  T
Q  300 ggagggagta 309  Q
    ||||||||||    
T  6126945 ggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 517 - 677
Target Start/End: Complemental strand, 18773128 - 18772963
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaagcataattttttaa 616  Q
    ||||||||||||||||||||||  ||||  |||||||||||| |||||||||||||||||  |  |||||| |||| |||||||||||||||||||| ||    
T  18773128 tgatcttcagaagaatgatgatgcaagcaatcaacaaatttgatcgtgttataatcttgcacaaattttcataaagccactcccaagcataatttttaaa 18773029  T
Q  617 caaccgatacaaaa-tattgatctt----gtctcggagatgattatttgattgagggggagatata 677  Q
    |||| ||| ||||| ||||| ||||    ||||  ||||||||| ||||||||| |||||||||||    
T  18773028 caactgattcaaaaatattggtcttcatcgtctgagagatgattgtttgattgacggggagatata 18772963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 517 - 630
Target Start/End: Original strand, 17604391 - 17604504
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaagcataattttttaa 616  Q
    ||||||| ||||||||| |||||||||| ||||||||||| |||| ||| |||||||||| ||  |||||||||||||| ||||||||| | ||||| ||    
T  17604391 tgatctttagaagaatggtgatataagcattcaacaaattcgttcttgtaataatcttgcagatattttcacaaagtcagtcccaagcagagtttttgaa 17604490  T
Q  617 caaccgatacaaaa 630  Q
    |||| |||||||||    
T  17604491 caactgatacaaaa 17604504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 38361807 - 38361743
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagata 257  Q
    |||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  38361807 ctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaaatagata 38361743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 190 - 303
Target Start/End: Complemental strand, 3549666 - 3549553
Alignment:
Q  190 gttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttat 289  Q
    ||||||||||||||| | ||||  |||||||||| | ||||||| | | || ||||||||||   ||||||||||||||||| | ||||| |||||||||    
T  3549666 gttctatttataagagatattttagtcaacaaaaattaatgtatctggtctaaatttttaaccgaatacatcaacttttgttaatataaatttctcttat 3549567  T
Q  290 aaataggatcggag 303  Q
    |||||||| |||||    
T  3549566 aaataggaccggag 3549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 13539979 - 13539909
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttt 267  Q
    |||||||||||| |||||||||||||||||    |||  ||||||||||||||||||||||||||||||||||||    
T  13539979 ctatttataagagaaatttaggtcaacaaa----aataaatttagactgaatttttaactagatacatcaacttt 13539909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 9006949 - 9006885
Alignment:
Q  242 aatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggaggga 306  Q
    |||||| |||||||||||||||||||||||||| ||||| ||| |||||||||||| | ||||||    
T  9006949 aattttgaactagatacatcaacttttgttgacctaaaagtctgttataaataggagcagaggga 9006885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 517 - 613
Target Start/End: Complemental strand, 25366184 - 25366088
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaagcataattttt 613  Q
    ||||||||||||| ||| |||||| ||| ||||||||||| | |||||| |||||||||| ||  |||| |||||||| |||||||| ||| |||||    
T  25366184 tgatcttcagaaggatggtgatatcagcattcaacaaattcggtcgtgtgataatcttgcagatgtttttacaaagtcgctcccaagtatagttttt 25366088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 36595856 - 36595789
Alignment:
Q  227 aatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaata 294  Q
    ||||||| ||||||||||||||||  ||||||||||| |||||||||| |||  ||||||||||||||    
T  36595856 aatgtatctagactgaatttttaatcagatacatcaatttttgttgacctaactttctcttataaata 36595789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 263 - 318
Target Start/End: Original strand, 37149039 - 37149094
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattatttatt 318  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||||||||||    
T  37149039 acttttgttgacctaaatttctcttataaataggaccggaggtagtattatttatt 37149094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 26350434 - 26350480
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||    
T  26350434 acttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 36563622 - 36563670
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  36563622 acttttgttgacctaaatttctcttataaataggatcggaggtagtatt 36563670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 2366419 - 2366345
Alignment:
Q  228 atgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcgga 302  Q
    |||||||| ||||||| ||||||| | |||||| |||| ||||||||  ||| ||||||||||||||| ||||||    
T  2366419 atgtatttggactgaaattttaaccaaatacatgaactcttgttgacccaaatttctcttataaatagaatcgga 2366345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 274
Target Start/End: Complemental strand, 2629657 - 2629579
Alignment:
Q  196 tttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgac 274  Q
    ||||||||||| |||||||||||||||||| ||||||| |   || | |||||||||| ||||||||| |||| |||||    
T  2629657 tttataagaaatatttaggtcaacaaaagttaatgtatctgatctaattttttaactatatacatcaaattttattgac 2629579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 11795214 - 11795168
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| |||||||||||||||||||||||| ||||    
T  11795214 acttttgttgacctaaatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 966184 - 966281
Alignment:
Q  215 tcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    ||||||| |||  |||||| | ||||||||||||||| ||||||||  | |||||||||   ||| |||||||||||||||||  |||||| ||||||    
T  966184 tcaacaacagttcatgtatcttgactgaatttttaaccagatacattcatttttgttgatccaaatttctcttataaataggactggagggggtatta 966281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 583035 - 582983
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattattt 315  Q
    |||| ||||||| |||| ||||||||||||||||| |||||| ||||||||||    
T  583035 acttatgttgacctaaatttctcttataaataggaccggaggtagtattattt 582983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 9395396 - 9395344
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattattt 315  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||| |||||    
T  9395396 acttttgttgacctaaatttctcttataaataggaccggaggtagtaatattt 9395344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 13033097 - 13033050
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  13033097 acttttgttgacctaaatttctcttataaataggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 13103070 - 13103023
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  13103070 acttttgttgacctaaatttctcttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 688 - 784
Target Start/End: Complemental strand, 22231164 - 22231066
Alignment:
Q  688 tctttttcccttcac--tggttttgtcccattgaatttttgtggtaaagtttttaatgagatagatatactggatattgtactctttttccttcactaa 784  Q
    |||||||||||||||  ||||||| ||||| ||   |||| |||||| |||||||| |||  | |||||   |||||||||||||||||||||||||||    
T  22231164 tctttttcccttcaccatggttttatcccaatgggattttctggtaaggtttttaacgaggcaaatatatcagatattgtactctttttccttcactaa 22231066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 27081016 - 27081063
Alignment:
Q  255 atacatcaacttttgttgacataaaattctcttataaataggatcgga 302  Q
    |||||||||||||||||||| ||||  |||||| ||||||||||||||    
T  27081016 atacatcaacttttgttgacctaaatgtctcttgtaaataggatcgga 27081063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 37641997 - 37641946
Alignment:
Q  265 ttttgttgacataaaattctcttataaataggatcggagggagtattattta 316  Q
    |||| ||||| |||| ||||||||||||||||| |||||| |||||||||||    
T  37641997 ttttattgacctaaatttctcttataaataggaccggaggtagtattattta 37641946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 35584450 - 35584512
Alignment:
Q  256 tacatcaacttttgttgacataaaattctcttataaataggatcggagggagtattatttatt 318  Q
    |||||||||||||||||||  ||  ||||||||||||||| || ||||| |||||| ||||||    
T  35584450 tacatcaacttttgttgactcaattttctcttataaatagaattggaggaagtattttttatt 35584512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 18167442 - 18167405
Alignment:
Q  186 tccagttctatttataagaaaaatttaggtcaacaaaa 223  Q
    ||||||||||||||||||||||| || |||||||||||    
T  18167442 tccagttctatttataagaaaaagtttggtcaacaaaa 18167405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 741
Target Start/End: Complemental strand, 19780359 - 19780299
Alignment:
Q  683 tgcactctttttcccttcac--tggttttgtcccattgaatttttgtggtaaagtttttaa 741  Q
    ||||||||||||||||| ||  ||||||| |||||||| |||||| |||||| ||||||||    
T  19780359 tgcactctttttcccttaaccatggttttatcccattggatttttctggtaaggtttttaa 19780299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 20848120 - 20848071
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    |||||| ||||| |||| ||||||||||||||||| |||||| |||||||    
T  20848120 acttttattgacctaaatttctcttataaataggaccggaggtagtatta 20848071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 35904448 - 35904530
Alignment:
Q  228 atgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    |||||||| ||||||||||||||||| ||||||  ||||||||||||  ||  |||||| ||||||| || || || ||||||||    
T  35904448 atgtatttggactgaatttttaactaaatacat--acttttgttgactaaattttctctaataaataagaccgaagagagtatta 35904530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 39290807 - 39290868
Alignment:
Q  212 aggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttga 273  Q
    |||||||||||| |  |||||||| || | ||||||||| ||||||||| ||||||||||||    
T  39290807 aggtcaacaaaaattgatgtatttggattaaatttttaattagatacattaacttttgttga 39290868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 178 - 317
Target Start/End: Original strand, 23784 - 23923
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  23784 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 23883  T
Q  278 aaattctcttataaataggatcggagggagtattatttat 317  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  23884 aaattttcttataaataggaccggagggagtattatttat 23923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 23831 - 23781
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattat 313  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||||    
T  23831 acttttgttgacctaaatttctcttataaataggaccggaggtagtattat 23781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 8e-51; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 178 - 312
Target Start/End: Complemental strand, 7785909 - 7785775
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  7785909 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 7785810  T
Q  278 aaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||||||||||| ||||||||||||||    
T  7785809 aaattctcttataaataggaccggagggagtatta 7785775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 177 - 310
Target Start/End: Complemental strand, 43199486 - 43199353
Alignment:
Q  177 tatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacat 276  Q
    ||||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||      
T  43199486 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacca 43199387  T
Q  277 aaaattctcttataaataggatcggagggagtat 310  Q
    ||||||||||||||||||||| ||||||||||||    
T  43199386 aaaattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 178 - 310
Target Start/End: Complemental strand, 54743 - 54611
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  54743 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 54644  T
Q  278 aaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||||| ||||||||||||    
T  54643 aaattctcttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 178 - 310
Target Start/End: Complemental strand, 2890293 - 2890161
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  2890293 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 2890194  T
Q  278 aaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||||| ||||||||||||    
T  2890193 aaattctcttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 179 - 309
Target Start/End: Original strand, 6552655 - 6552785
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  6552655 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 6552754  T
Q  279 aattctcttataaataggatcggagggagta 309  Q
    ||||||||||||||||||| |||||||||||    
T  6552755 aattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 178 - 312
Target Start/End: Complemental strand, 7805830 - 7805696
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||  |    
T  7805830 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgaccca 7805731  T
Q  278 aaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||||||||||| ||||||||||||||    
T  7805730 aaattctcttataaataggaccggagggagtatta 7805696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 179 - 313
Target Start/End: Complemental strand, 44498317 - 44498183
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||  ||    
T  44498317 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaa 44498218  T
Q  279 aattctcttataaataggatcggagggagtattat 313  Q
    ||||||||||||||||||| |||||||||||||||    
T  44498217 aattctcttataaataggaccggagggagtattat 44498183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 179 - 311
Target Start/End: Complemental strand, 39571333 - 39571201
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  39571333 tactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 39571234  T
Q  279 aattctcttataaataggatcggagggagtatt 311  Q
    ||||||||||||||||||| |||||||||||||    
T  39571233 aattctcttataaataggaccggagggagtatt 39571201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 179 - 309
Target Start/End: Complemental strand, 3304408 - 3304278
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  3304408 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 3304309  T
Q  279 aattctcttataaataggatcggagggagta 309  Q
    |||| |||||||||||||| |||||||||||    
T  3304308 aattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 176 - 310
Target Start/End: Complemental strand, 25601133 - 25600999
Alignment:
Q  176 atatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgaca 275  Q
    |||||||| ||||  | |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||     
T  25601133 atatactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacc 25601034  T
Q  276 taaaattctcttataaataggatcggagggagtat 310  Q
     ||||||||||||||||||||| ||||||||||||    
T  25601033 caaaattctcttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 194 - 311
Target Start/End: Complemental strand, 12763769 - 12763652
Alignment:
Q  194 tatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaat 293  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||    
T  12763769 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaat 12763670  T
Q  294 aggatcggagggagtatt 311  Q
    |||| |||||||||||||    
T  12763669 aggaccggagggagtatt 12763652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 178 - 311
Target Start/End: Complemental strand, 32211494 - 32211361
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||  |    
T  32211494 atactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaatttttgttgaccca 32211395  T
Q  278 aaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||||||||||| |||||||||||||    
T  32211394 aaattctcttataaataggaccggagggagtatt 32211361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 179 - 303
Target Start/End: Complemental strand, 12343270 - 12343146
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  12343270 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaa 12343171  T
Q  279 aattctcttataaataggatcggag 303  Q
    ||||||||||||||||||| |||||    
T  12343170 aattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 179 - 311
Target Start/End: Complemental strand, 32114605 - 32114473
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  ||    
T  32114605 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaa 32114506  T
Q  279 aattctcttataaataggatcggagggagtatt 311  Q
    |||| |||||||||||||| |||||||||||||    
T  32114505 aattttcttataaataggaccggagggagtatt 32114473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 33289392 - 33289261
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  33289392 atactacctccggtcctatttataagagaaatttagatcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 33289293  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||| |||||||||||    
T  33289292 aaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 177 - 294
Target Start/End: Original strand, 13578855 - 13578972
Alignment:
Q  177 tatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacat 276  Q
    ||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||      
T  13578855 tatactacctccagttctatttataagagaaatttaggtcaataaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgaccc 13578954  T
Q  277 aaaattctcttataaata 294  Q
    ||||||||||||||||||    
T  13578955 aaaattctcttataaata 13578972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 179 - 316
Target Start/End: Complemental strand, 15888482 - 15888345
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||  ||    
T  15888482 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaa 15888383  T
Q  279 aattctcttataaataggatcggagggagtattattta 316  Q
    ||||||||||||||||| |  |||||||||||| ||||    
T  15888382 aattctcttataaatagaactggagggagtatttttta 15888345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 31654627 - 31654743
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||    
T  31654627 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattcttttataaa 31654726  T
Q  293 taggatcggagggagta 309  Q
    ||||| |||||| ||||    
T  31654727 taggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 179 - 311
Target Start/End: Original strand, 7012171 - 7012303
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||   ||    
T  7012171 tactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatatatttggactgaatttttaactagatacatcaacttttgttgatccaa 7012270  T
Q  279 aattctcttataaataggatcggagggagtatt 311  Q
    ||||||||||||||||||| |||||| ||||||    
T  7012271 aattctcttataaataggaccggaggaagtatt 7012303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 193 - 310
Target Start/End: Original strand, 8587184 - 8587301
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| ||| || |||||||||||||  |||||||| |||| ||||||||||||||||||||||||||| |||||  ||  ||||||||||||    
T  8587184 ctatttataagagaaagtttggtcaacaaaagttgatgtattttgactaaatttttaactagatacatcaacttttattgactcaagtttctcttataaa 8587283  T
Q  293 taggatcggagggagtat 310  Q
    || || |||||| |||||    
T  8587284 taagaccggaggaagtat 8587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 517 - 602
Target Start/End: Complemental strand, 12146389 - 12146304
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaa 602  Q
    ||||||||||||||||| |||||||| | |||||||||||||||| ||| ||| |||||| |||||||||| ||||||||||||||    
T  12146389 tgatcttcagaagaatggtgatataaacattcaacaaatttgttcatgtgatagtcttgcagaccttttcataaagtcactcccaa 12146304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 27422239 - 27422328
Alignment:
Q  228 atgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtattatttat 317  Q
    |||||||| ||||||||||||||| ||||||||  | ||||||||||  ||| ||||||||||||||||| || ||||||||||||||||    
T  27422239 atgtatttggactgaatttttaaccagatacattcatttttgttgacccaaatttctcttataaataggaccgaagggagtattatttat 27422328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 193 - 310
Target Start/End: Original strand, 28463625 - 28463742
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| ||| || |||||||||||||  |||||||| ||||||||||| ||| ||||| ||||||||| | ||||  || |||||   |||||    
T  28463625 ctatttataagagaaagttgggtcaacaaaagttgatgtatttggactgaattttgaaccagatatatcaactttcggtgacccaatattctgcaataaa 28463724  T
Q  293 taggatcggagggagtat 310  Q
    ||||||||||||||||||    
T  28463725 taggatcggagggagtat 28463742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 24692094 - 24691986
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||||||| ||||||||||||||||  |||||| |  |||||| ||||||| ||||| ||||||||||||||||  ||| |||| ||| |||    
T  24692094 ctatttataagaaaaagttaggtcaacaaaagttgatgtatctgaactgaa-ttttaaccagatatatcaacttttgttgacccaaatttcttttaaaaa 24691996  T
Q  293 taggatcgga 302  Q
    ||||| ||||    
T  24691995 taggaccgga 24691986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 4245712 - 4245649
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactg 241  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| |||||    
T  4245712 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactg 4245649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 294
Target Start/End: Original strand, 17006925 - 17007026
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| ||| || |||||||||||||  ||| || | ||||||||| ||||  |||||||||||||||| |||||  ||| ||||||||||||    
T  17006925 ctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttctcttataaa 17007024  T
Q  293 ta 294  Q
    ||    
T  17007025 ta 17007026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 17570322 - 17570221
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| ||| || |||||||||||||  ||| || | ||||||||| ||||  |||||||||||||||| |||||  ||| ||||||||||||    
T  17570322 ctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttctcttataaa 17570223  T
Q  293 ta 294  Q
    ||    
T  17570222 ta 17570221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 24692052 - 24692110
Alignment:
Q  253 agatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||||||||||||| |||  || ||||||||||||||||| ||||||||||    
T  24692052 agatacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtatt 24692110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 603
Target Start/End: Complemental strand, 27680141 - 27680055
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||||||||| ||| |||||| ||| ||||||||||| | |||||| |||||||||| ||  |||| |||||||| ||||||||    
T  27680141 tgatcttcagaaggatggtgatatcagcattcaacaaattcggtcgtgtaataatcttgcagatgtttttacaaagtcgctcccaag 27680055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 603
Target Start/End: Original strand, 37209352 - 37209438
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||||||||| ||| |||||| ||| ||||||||||| | |||||| |||||||||| ||  |||| |||||||| ||||||||    
T  37209352 tgatcttcagaaggatggtgatatcagcattcaacaaattcggtcgtgtgataatcttgcagatgtttttacaaagtcgctcccaag 37209438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 54696 - 54749
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattattta 316  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||||||||    
T  54696 acttttgttgacctaaatttctcttataaataggaccggaggtagtattattta 54749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 255 - 316
Target Start/End: Complemental strand, 8587224 - 8587163
Alignment:
Q  255 atacatcaacttttgttgacataaaattctcttataaataggatcggagggagtattattta 316  Q
    ||||||||||||||||||||  ||  ||||||||||||||||| ||||||||||| ||||||    
T  8587224 atacatcaacttttgttgaccaaactttctcttataaataggaccggagggagtactattta 8587163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 309
Target Start/End: Original strand, 15888358 - 15888482
Alignment:
Q  185 ctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattct 284  Q
    |||||||||||||||||||| || ||| |||||||||||||  |||||| |||    || ||  | | | ||||||  |||||||||||| |||| ||||    
T  15888358 ctccagttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttct 15888457  T
Q  285 cttataaataggatcggagggagta 309  Q
    ||||||||||||| |||||| ||||    
T  15888458 cttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 294
Target Start/End: Complemental strand, 28999163 - 28999063
Alignment:
Q  194 tatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaat 293  Q
    ||||||||| | ||| || ||||||||||| |  |||||| ||||||||||||||||||| |||| | ||||||| ||||| |||| || || |||||||    
T  28999163 tatttataaaagaaagtttggtcaacaaaaattgatgtatctagactgaatttttaactacatacgtaaacttttattgacttaaatttttcatataaat 28999064  T
Q  294 a 294  Q
    |    
T  28999063 a 28999063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 30171535 - 30171483
Alignment:
Q  256 tacatcaacttttgttgacataaaattctcttataaataggatcggagggagt 308  Q
    ||||| |||||||||||||  ||||||||||| ||||||||||||||||||||    
T  30171535 tacattaacttttgttgactcaaaattctcttgtaaataggatcggagggagt 30171483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 25601084 - 25601131
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| |||||||||||||||||||||||| |||||    
T  25601084 acttttgttgacctaaatttctcttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 517 - 603
Target Start/End: Original strand, 21247318 - 21247404
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||||||||| ||| |||||| ||| ||||||||||| | |||||| ||||| |||| ||  |||| |||||||| ||||||||    
T  21247318 tgatcttcagaaggatggtgatatcagcattcaacaaattcggtcgtgtgataatattgcagatgtttttacaaagtcgctcccaag 21247404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 31654659 - 31654613
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||||||||    
T  31654659 acttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 43199438 - 43199492
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattatttat 317  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||| ||||||    
T  43199438 acttttgttgacctaaatttctcttataaataggaccggaggtagtataatttat 43199492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 2890246 - 2890295
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||||    
T  2890246 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 2890295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 4245665 - 4245718
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattattta 316  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||| ||||    
T  4245665 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttttta 4245718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 17006967 - 17006914
Alignment:
Q  253 agatacatcaacttttgttgacataaaattctcttataaataggatcggaggga 306  Q
    |||| |||||||||||||||||  ||  ||||||||||||||||||||||||||    
T  17006967 agatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17006914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 17570280 - 17570333
Alignment:
Q  253 agatacatcaacttttgttgacataaaattctcttataaataggatcggaggga 306  Q
    |||| |||||||||||||||||  ||  ||||||||||||||||||||||||||    
T  17570280 agatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 7785862 - 7785910
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  7785862 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 7805783 - 7805831
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  7805783 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 35564757 - 35564706
Alignment:
Q  242 aatttttaactagatacatcaacttttgttgacataaaattctcttataaat 293  Q
    |||||| ||||||||||||||| ||||||||||  |||| ||||||||||||    
T  35564757 aattttgaactagatacatcaaattttgttgactcaaaaatctcttataaat 35564706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 3304362 - 3304408
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  3304362 acttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 6552701 - 6552655
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  6552701 acttttgttgacctaaatttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 12343224 - 12343270
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  12343224 acttttgttgacctaaatttctcttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 32114559 - 32114605
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  32114559 acttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 33057655 - 33057725
Alignment:
Q  240 tgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||| ||||||| ||||||||||| ||||||||||  ||  |||||||||||||| || |||| |||||||    
T  33057655 tgaaattttaaccagatacatcaatttttgttgaccaaactttctcttataaataagaccggatggagtat 33057725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 44498271 - 44498317
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  44498271 acttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 28463665 - 28463616
Alignment:
Q  255 atacatcaacttttgttgacataaaattctcttataaataggatcggagg 304  Q
    ||||||||||||||||||||  ||  ||||||||||||||||| ||||||    
T  28463665 atacatcaacttttgttgacccaactttctcttataaataggaccggagg 28463616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 741
Target Start/End: Complemental strand, 30714563 - 30714503
Alignment:
Q  683 tgcactctttttcccttcac--tggttttgtcccattgaatttttgtggtaaagtttttaa 741  Q
    ||||||||||||||||| ||  ||||||||||||||||  ||||| |||||| ||||||||    
T  30714563 tgcactctttttcccttaaccatggttttgtcccattgggtttttctggtaaggtttttaa 30714503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 741
Target Start/End: Complemental strand, 30722340 - 30722280
Alignment:
Q  683 tgcactctttttcccttcac--tggttttgtcccattgaatttttgtggtaaagtttttaa 741  Q
    ||||||||||||||||| ||  ||||||||||||||||  ||||| |||||| ||||||||    
T  30722340 tgcactctttttcccttaaccatggttttgtcccattgggtttttctggtaaggtttttaa 30722280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 310
Target Start/End: Original strand, 32211449 - 32211494
Alignment:
Q  265 ttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||| |||| ||||||||||||||||| |||||| |||||    
T  32211449 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 3e-50; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 176 - 309
Target Start/End: Original strand, 2830332 - 2830465
Alignment:
Q  176 atatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgaca 275  Q
    |||||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  2830332 atatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 2830431  T
Q  276 taaaattctcttataaataggatcggagggagta 309  Q
     ||||||||||||||||||||| |||||||||||    
T  2830432 caaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 177 - 310
Target Start/End: Complemental strand, 11572277 - 11572144
Alignment:
Q  177 tatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacat 276  Q
    ||||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||      
T  11572277 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 11572178  T
Q  277 aaaattctcttataaataggatcggagggagtat 310  Q
    ||||||||||||||||||||| ||||||||||||    
T  11572177 aaaattctcttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 179 - 312
Target Start/End: Original strand, 26602323 - 26602456
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  26602323 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 26602422  T
Q  279 aattctcttataaataggatcggagggagtatta 312  Q
    ||||||||||||||||||| ||||||||||||||    
T  26602423 aattctcttataaataggaccggagggagtatta 26602456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 6330115 - 6330246
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  6330115 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 6330214  T
Q  279 aattctcttataaataggatcggagggagtat 310  Q
    ||||||||||||||||||| ||||||||||||    
T  6330215 aattctcttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 8383100 - 8382969
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |    
T  8383100 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 8383001  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||| |||||||||||    
T  8383000 aaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 177 - 311
Target Start/End: Original strand, 8099528 - 8099662
Alignment:
Q  177 tatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacat 276  Q
    ||||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||      
T  8099528 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgaccc 8099627  T
Q  277 aaaattctcttataaataggatcggagggagtatt 311  Q
    ||||||||||||||||||||| |||||||||||||    
T  8099628 aaaattctcttataaataggaccggagggagtatt 8099662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 193 - 310
Target Start/End: Complemental strand, 13853709 - 13853592
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  13853709 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaa 13853610  T
Q  293 taggatcggagggagtat 310  Q
    ||||| ||||||||||||    
T  13853609 taggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 177 - 310
Target Start/End: Complemental strand, 35031133 - 35031000
Alignment:
Q  177 tatactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacat 276  Q
    ||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||      
T  35031133 tatactacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgaccc 35031034  T
Q  277 aaaattctcttataaataggatcggagggagtat 310  Q
    ||||||||||||||||||||| |||||| |||||    
T  35031033 aaaattctcttataaataggaccggaggaagtat 35031000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 178 - 310
Target Start/End: Original strand, 6068565 - 6068697
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||  |    
T  6068565 atactacctccggtcctatttataagaaaaatttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgactca 6068664  T
Q  278 aaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||||| ||||||||||||    
T  6068665 aaattctcttataaataggaccggagggagtat 6068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 178 - 311
Target Start/End: Complemental strand, 33052925 - 33052792
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||  |    
T  33052925 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgaccca 33052826  T
Q  278 aaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||||||||||| |||| ||||||||    
T  33052825 aaattctcttataaataggaccggatggagtatt 33052792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 179 - 311
Target Start/End: Original strand, 9644696 - 9644828
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| ||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  9644696 tactacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 9644795  T
Q  279 aattctcttataaataggatcggagggagtatt 311  Q
    ||||||||||||||||||| |||||||||||||    
T  9644796 aattctcttataaataggaccggagggagtatt 9644828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 179 - 311
Target Start/End: Original strand, 9650713 - 9650845
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| ||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  9650713 tactacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 9650812  T
Q  279 aattctcttataaataggatcggagggagtatt 311  Q
    ||||||||||||||||||| |||||||||||||    
T  9650813 aattctcttataaataggaccggagggagtatt 9650845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 8417908 - 8417793
Alignment:
Q  194 tatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaat 293  Q
    ||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  8417908 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaat 8417809  T
Q  294 aggatcggagggagta 309  Q
    |||| || ||||||||    
T  8417808 aggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 193 - 316
Target Start/End: Original strand, 6143568 - 6143691
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  6143568 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgtcccaaaattctcttataaa 6143667  T
Q  293 taggatcggagggagtattattta 316  Q
    ||| | |||| |||||| ||||||    
T  6143668 tagaaccggaaggagtagtattta 6143691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 195 - 310
Target Start/End: Complemental strand, 28747248 - 28747133
Alignment:
Q  195 atttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaata 294  Q
    |||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  28747248 atttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaata 28747149  T
Q  295 ggatcggagggagtat 310  Q
    |||  | |||||||||    
T  28747148 ggactgaagggagtat 28747133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 13043758 - 13043850
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgtt 271  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||| |||||||||||  | ||||||||||||||||||||||||||||||||    
T  13043758 tactacctccggttctatttataagagaaatttaggtcaacaaaaatgaatgtatttgaattgaatttttaactagatacatcaacttttgtt 13043850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 17992018 - 17992118
Alignment:
Q  209 tttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagt 308  Q
    |||||||||| |||||||||||||||| || |||||||||||||||||||||| | ||||||||||  ||||||||||||||||||||| || |||||||    
T  17992018 tttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatcgatttttgttgacccaaaattctcttataaataggaccgaagggagt 17992117  T
Q  309 a 309  Q
    |    
T  17992118 a 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 230 - 310
Target Start/End: Original strand, 22896513 - 22896593
Alignment:
Q  230 gtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||    
T  22896513 gtatttggactgaatttttaactagatacatcaacttttgttgacaaaaaattctcttataaataggaccggcgggagtat 22896593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 237 - 310
Target Start/End: Original strand, 3788095 - 3788168
Alignment:
Q  237 gactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    ||||||||| ||||||| |||||||||||||||||||| |||| || ||||||||||| || ||||||||||||    
T  3788095 gactgaattgttaactaaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 193 - 311
Target Start/End: Complemental strand, 6069056 - 6068936
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa--aattctcttata 290  Q
    |||||||||| | | |||||||||||||||||| ||||||||| | || ||||||||||| ||||| ||| ||||||||||| |||  | ||||  ||||    
T  6069056 ctatttataaaagatatttaggtcaacaaaagttaatgtatttggtctaaatttttaactcgatacttcatcttttgttgacctaaatatttcttatata 6068957  T
Q  291 aataggatcggagggagtatt 311  Q
    ||||||||| || ||||||||    
T  6068956 aataggatcagatggagtatt 6068936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 7597048 - 7596977
Alignment:
Q  238 actgaatttttaactagatacatcaacttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||| |||||||||||||| |||||  ||| ||||| |||||||||||| ||||||||||    
T  7597048 actgaatttttaactaaatacatcaacttttattgactcaaatttctcctataaataggattggagggagta 7596977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 603
Target Start/End: Original strand, 23427124 - 23427210
Alignment:
Q  517 tgatcttcagaagaatgatgatataagctttcaacaaatttgttcgtgttataatcttgctgaccttttcacaaagtcactcccaag 603  Q
    ||||||||||||| ||| |||||| ||| ||||||||||| | |||||| |||||||||| ||  |||| |||||||| ||||||||    
T  23427124 tgatcttcagaaggatggtgatatcagcattcaacaaattcggtcgtgtgataatcttgcagatgtttttacaaagtcgctcccaag 23427210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 193 - 310
Target Start/End: Complemental strand, 14936573 - 14936456
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| | |||| ||||||||| |||  |||||||| ||   |||| |||||||||||||||| ||||||||||| ||||  | |||| || |    
T  14936573 ctatttataagagatatttgggtcaacaatagttgatgtatttggaacaaattcttaactagatacatcaccttttgttgacctaaatgtttcttctata 14936474  T
Q  293 taggatcggagggagtat 310  Q
    ||||| | ||||||||||    
T  14936473 taggaccagagggagtat 14936456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 294
Target Start/End: Original strand, 6549902 - 6549997
Alignment:
Q  198 tataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaata 294  Q
    ||||||| |||||||||||||||||||| ||||||||| ||   || |||  |||||||||||||||||||||| ||  |||  |||||||||||||    
T  6549902 tataagagaaatttaggtcaacaaaagttaatgtattt-gatgaaaatttggactagatacatcaacttttgttaaccaaaatatctcttataaata 6549997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 6143600 - 6143553
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| |||||||||||||||||||||||| |||||    
T  6143600 acttttgttgacctaaatttctcttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 8383053 - 8383102
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||||    
T  8383053 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 8383102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 7597052 - 7597108
Alignment:
Q  254 gatacatcaacttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||||||||| ||| ||  |||||||||||||| ||| |||||||||||    
T  7597052 gatacatcaacttttgttaacacaactttctcttataaataagattggagggagtat 7597108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 13853677 - 13853729
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattattt 315  Q
    |||||||||||| |||| ||||||||||||||||| || ||| ||||||||||    
T  13853677 acttttgttgacctaaatttctcttataaataggaccgaaggtagtattattt 13853729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 33052878 - 33052926
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  33052878 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 2830381 - 2830334
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  2830381 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 2830334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 3788152 - 3788109
Alignment:
Q  194 tatttataagaaaaatttaggtcaacaaaagtgaatgtatttag 237  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||    
T  3788152 tatttataagataaatttaggtcaacaaaagttgatgtatttag 3788109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 8099576 - 8099529
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  8099576 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 8099529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 8417877 - 8417928
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtattatt 314  Q
    |||||||||||| |||| |||||||||||||| || | ||||||||||||||    
T  8417877 acttttgttgacctaaatttctcttataaataagaccagagggagtattatt 8417928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 11572229 - 11572276
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtat 310  Q
    |||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  11572229 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 11572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 6330161 - 6330115
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  6330161 acttttgttgacctaaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 26602369 - 26602323
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  26602369 acttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 255 - 309
Target Start/End: Original strand, 32045157 - 32045211
Alignment:
Q  255 atacatcaacttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||| ||||||||||||  ||||  ||| ||||||||||||||||||||||||    
T  32045157 atacattaacttttgttgagttaaatatcttttataaataggatcggagggagta 32045211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 22896512 - 22896471
Alignment:
Q  268 tgttgacataaaattctcttataaataggatcggagggagta 309  Q
    ||||||| |||| ||||||||||||||||| |||||||||||    
T  22896512 tgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 318
Target Start/End: Complemental strand, 24949658 - 24949621
Alignment:
Q  281 ttctcttataaataggatcggagggagtattatttatt 318  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  24949658 ttctcttgtaaataggaccggagggagtattatttatt 24949621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 99; Significance: 2e-48; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 178 - 312
Target Start/End: Original strand, 12859 - 12993
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||  |    
T  12859 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgaccca 12958  T
Q  278 aaattctcttataaataggatcggagggagtatta 312  Q
    |||||||||||||||||||| ||||||||||||||    
T  12959 aaattctcttataaataggaccggagggagtatta 12993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 12906 - 12858
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  12906 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 97; Significance: 3e-47; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 179 - 315
Target Start/End: Complemental strand, 6261 - 6125
Alignment:
Q  179 tactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataa 278  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||  ||    
T  6261 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttgttgacccaa 6162  T
Q  279 aattctcttataaataggatcggagggagtattattt 315  Q
    |||| |||||||||||||| |||||||||||||||||    
T  6161 aattttcttataaataggaccggagggagtattattt 6125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 6215 - 6261
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagta 309  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  6215 acttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 96; Significance: 1e-46; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 178 - 309
Target Start/End: Original strand, 49504 - 49635
Alignment:
Q  178 atactatctccagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacata 277  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |    
T  49504 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgaccca 49603  T
Q  278 aaattctcttataaataggatcggagggagta 309  Q
    |||||||||||||||||||| |||||||||||    
T  49604 aaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 49551 - 49503
Alignment:
Q  263 acttttgttgacataaaattctcttataaataggatcggagggagtatt 311  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  49551 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 49503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 193 - 297
Target Start/End: Original strand, 1349 - 1453
Alignment:
Q  193 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  1349 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaa 1448  T
Q  293 tagga 297  Q
    |||||    
T  1449 tagga 1453  T

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Target: scaffold0011 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 197 - 311
Target Start/End: Complemental strand, 231415 - 231301
Alignment:
Q  197 ttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaaattctcttataaatagg 296  Q
    |||||||| ||| || | |||||||||||  |||||| | ||||||||||| |||||| || |||||||||||||||| ||| |||||| ||||||||||    
T  231415 ttataagagaaagttggatcaacaaaagtttatgtatctggactgaattttgaactaggtatatcaacttttgttgacctaatattctcctataaatagg 231316  T
Q  297 atcggagggagtatt 311  Q
    | |||||||||||||    
T  231315 accggagggagtatt 231301  T

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Target: scaffold0081 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 690 - 786
Target Start/End: Original strand, 7594 - 7692
Alignment:
Q  690 tttttcccttcactg--gttttgtcccattgaatttttgtggtaaagtttttaatgagatagatatactggatattgtactctttttccttcactaaga 786  Q
    ||||||||||||| |  ||||||||||||||| ||||| || |||  ||||||| ||  |||||||| |||||||||||||||||||||||||||||||    
T  7594 tttttcccttcaccgcagttttgtcccattgagtttttctgataagatttttaacgacgtagatatattggatattgtactctttttccttcactaaga 7692  T

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Target: scaffold0650 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 176 - 274
Target Start/End: Complemental strand, 117 - 20
Alignment:
Q  176 atatactatctccagttctatttata-agaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgac 274  Q
    |||||||  |||| |||||||||||| ||||| |||  |||||||||||||  |||||||| |||| |||||||||| | ||||||||||||||||||||    
T  117 atatactccctccggttctatttatagagaaagatt--ggtcaacaaaagttgatgtatttggactaaatttttaaccaaatacatcaacttttgttgac 20  T

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Target: scaffold0415 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 273
Target Start/End: Complemental strand, 13847 - 13761
Alignment:
Q  188 cagttctatttataagaaaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaactagatacatc--aacttttgttga 273  Q
    |||| ||| |||||||| |||||||||||||||||| | ||| |||||  |||||||||||||||| |||||||  ||||||||||||    
T  13847 cagtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaacta-atacatcaaaacttttgttga 13761  T

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Target: scaffold0017 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 30099 - 30037
Alignment:
Q  217 aacaaaagtgaatgtatttagactgaatttttaactagatacatcaacttttgttgacataaa 279  Q
    |||||||||  |||||||| | || |||| |||||||||||||||| ||||| ||||||||||    
T  30099 aacaaaagtagatgtatttggtctaaattcttaactagatacatcatcttttattgacataaa 30037  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 741
Target Start/End: Original strand, 111687 - 111747
Alignment:
Q  683 tgcactctttttcccttcac--tggttttgtcccattgaatttttgtggtaaagtttttaa 741  Q
    ||||||||||||||||| ||  ||||||||||||||||  ||||| |||||| ||||||||    
T  111687 tgcactctttttcccttaaccatggttttgtcccattgggtttttctggtaaggtttttaa 111747  T

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