View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9786_low_20 (Length: 230)
Name: NF9786_low_20
Description: NF9786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9786_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 35648101 - 35647891
Alignment:
| Q |
1 |
gaatgggtgaagggtatcagagatatgtgtatagggtactaaagcaagtgcatcctcaaatggggatttcatctcaagctatgactattctgaataattt |
100 |
Q |
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| T |
35648101 |
gaatgggtgaagggtatcagagatatgtgtatagggtactaaagcaagtgcatcctcaaatggggatttcatctcaagctatgactattctgaataattt |
35648002 |
T |
|
| Q |
101 |
gatgaatgacatgtttgagaagctagctgatgaagctgcaaaactgacagtgtacacaaaacacatgacactaacgtcgagggagattcaaggtgcagtg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35648001 |
gatgaatgacatgtttgagaagctagctgatgaagctgcaaaactgacagcgtacacaaaacacatgacactaacgtcgagggagattcaaggtgcagtg |
35647902 |
T |
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| Q |
201 |
aaactggtttt |
211 |
Q |
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||||||||||| |
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| T |
35647901 |
aaactggtttt |
35647891 |
T |
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