View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9788_low_19 (Length: 318)

Name: NF9788_low_19
Description: NF9788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9788_low_19
NF9788_low_19
[»] chr3 (87 HSPs)
chr3 (11-257)||(51974370-51974613)
chr3 (14-225)||(21228254-21228466)
chr3 (24-225)||(21229334-21229536)
chr3 (14-200)||(47147405-47147592)
chr3 (14-199)||(17469548-17469734)
chr3 (14-199)||(50034422-50034607)
chr3 (14-199)||(49822700-49822898)
chr3 (14-199)||(25787511-25787709)
chr3 (14-199)||(25829468-25829666)
chr3 (51-199)||(33936356-33936505)
chr3 (57-302)||(42564123-42564362)
chr3 (14-199)||(42598166-42598364)
chr3 (14-199)||(50020118-50020316)
chr3 (68-302)||(20139745-20139973)
chr3 (57-302)||(6044986-6045225)
chr3 (53-199)||(33751483-33751630)
chr3 (77-302)||(49086332-49086552)
chr3 (51-302)||(25787413-25787660)
chr3 (51-302)||(25829370-25829617)
chr3 (57-210)||(33187841-33187994)
chr3 (93-206)||(48886565-48886678)
chr3 (57-206)||(49027152-49027301)
chr3 (51-199)||(51435795-51435944)
chr3 (68-206)||(12975028-12975166)
chr3 (51-302)||(42598068-42598315)
chr3 (142-302)||(15493434-15493588)
chr3 (57-206)||(26162272-26162421)
chr3 (57-206)||(36178215-36178364)
chr3 (57-210)||(43475603-43475756)
chr3 (57-206)||(51304746-51304895)
chr3 (89-199)||(5844774-5844885)
chr3 (53-199)||(42602041-42602188)
chr3 (17-199)||(30688657-30688821)
chr3 (57-224)||(10424382-10424549)
chr3 (170-233)||(53722792-53722855)
chr3 (145-210)||(47700683-47700749)
chr3 (166-302)||(55027050-55027179)
chr3 (25-96)||(49027328-49027399)
chr3 (115-210)||(35540298-35540393)
chr3 (172-302)||(46572613-46572737)
chr3 (142-199)||(25450236-25450294)
chr3 (134-206)||(11908301-11908373)
chr3 (134-210)||(49407053-49407129)
chr3 (267-302)||(5844676-5844711)
chr3 (267-302)||(17469797-17469832)
chr3 (267-302)||(25450138-25450173)
chr3 (267-302)||(28410775-28410810)
chr3 (267-302)||(35852896-35852931)
chr3 (267-302)||(42602251-42602286)
chr3 (267-302)||(43022984-43023019)
chr3 (267-302)||(47147654-47147689)
chr3 (267-302)||(50034673-50034708)
chr3 (227-302)||(51998894-51998969)
chr3 (267-301)||(49356944-49356978)
chr3 (166-207)||(7520873-7520914)
chr3 (107-206)||(30415195-30415294)
chr3 (267-302)||(4873811-4873846)
chr3 (267-302)||(26162193-26162228)
chr3 (267-302)||(30415115-30415150)
chr3 (267-302)||(32120092-32120127)
chr3 (267-302)||(33751694-33751729)
chr3 (267-302)||(33934900-33934935)
chr3 (267-302)||(37182722-37182757)
chr3 (267-302)||(37410142-37410177)
chr3 (267-302)||(38571801-38571836)
chr3 (267-302)||(41183652-41183687)
chr3 (267-302)||(44084690-44084725)
chr3 (267-302)||(49146975-49147010)
chr3 (267-302)||(49710158-49710193)
chr3 (267-302)||(50734397-50734432)
chr3 (267-302)||(50778423-50778458)
chr3 (267-302)||(53722873-53722908)
chr3 (14-76)||(4874047-4874109)
chr3 (268-302)||(26549898-26549932)
chr3 (272-302)||(30862467-30862497)
chr3 (268-302)||(50020377-50020411)
chr3 (269-302)||(7520785-7520818)
chr3 (267-300)||(11908419-11908452)
chr3 (267-300)||(12975210-12975243)
chr3 (267-300)||(31169921-31169954)
chr3 (14-51)||(33751432-33751469)
chr3 (14-51)||(33936307-33936344)
chr3 (267-300)||(35471973-35472006)
chr3 (14-51)||(51435746-51435783)
chr3 (107-206)||(27847819-27847918)
chr3 (119-206)||(31169999-31170086)
chr3 (274-302)||(39291089-39291117)
[»] chr6 (32 HSPs)
chr6 (14-210)||(7540347-7540544)
chr6 (14-225)||(24115182-24115395)
chr6 (14-199)||(6377233-6377431)
chr6 (25-225)||(12502055-12502255)
chr6 (14-199)||(17958101-17958299)
chr6 (51-302)||(6377135-6377382)
chr6 (51-302)||(17958003-17958250)
chr6 (51-199)||(634851-635000)
chr6 (58-225)||(8222291-8222458)
chr6 (51-199)||(29951829-29951978)
chr6 (57-302)||(12513201-12513443)
chr6 (68-206)||(18642444-18642582)
chr6 (89-199)||(34328607-34328718)
chr6 (57-206)||(26653890-26654039)
chr6 (57-206)||(26759859-26760008)
chr6 (57-210)||(34242598-34242748)
chr6 (119-199)||(2503582-2503663)
chr6 (267-302)||(198208-198243)
chr6 (267-302)||(2503726-2503761)
chr6 (267-302)||(6725327-6725362)
chr6 (227-302)||(10886581-10886656)
chr6 (227-302)||(32360089-32360164)
chr6 (267-302)||(34328781-34328816)
chr6 (128-199)||(198072-198144)
chr6 (107-206)||(34841714-34841813)
chr6 (267-302)||(635063-635098)
chr6 (267-302)||(7541324-7541359)
chr6 (267-302)||(8668817-8668852)
chr6 (267-302)||(34841858-34841893)
chr6 (14-51)||(634802-634839)
chr6 (267-300)||(24348859-24348892)
chr6 (44-96)||(34242519-34242571)
[»] chr7 (44 HSPs)
chr7 (11-225)||(1939650-1939865)
chr7 (14-199)||(5813410-5813596)
chr7 (14-197)||(25218047-25218243)
chr7 (58-302)||(40300589-40300827)
chr7 (57-299)||(22660060-22660296)
chr7 (51-199)||(22194397-22194546)
chr7 (14-199)||(30630389-30630587)
chr7 (57-302)||(42881781-42882020)
chr7 (57-206)||(32749139-32749288)
chr7 (57-206)||(40690511-40690660)
chr7 (57-205)||(32126988-32127136)
chr7 (95-210)||(114900-115015)
chr7 (57-206)||(26815311-26815460)
chr7 (90-194)||(33379493-33379598)
chr7 (107-210)||(43201669-43201773)
chr7 (166-302)||(35192760-35192890)
chr7 (108-225)||(33078532-33078649)
chr7 (57-206)||(45549124-45549272)
chr7 (119-206)||(39769976-39770063)
chr7 (134-302)||(28317737-28317899)
chr7 (134-210)||(38970313-38970389)
chr7 (267-302)||(5813659-5813694)
chr7 (267-302)||(35028476-35028511)
chr7 (267-302)||(37888761-37888796)
chr7 (267-302)||(43570798-43570833)
chr7 (90-140)||(2414575-2414625)
chr7 (142-199)||(24793690-24793748)
chr7 (268-302)||(33379667-33379701)
chr7 (267-305)||(40690707-40690745)
chr7 (134-302)||(33508258-33508418)
chr7 (137-199)||(35028574-35028638)
chr7 (107-206)||(36521734-36521833)
chr7 (267-302)||(25217946-25217981)
chr7 (267-302)||(26815505-26815540)
chr7 (267-302)||(30630291-30630326)
chr7 (267-302)||(36521878-36521913)
chr7 (267-302)||(38970431-38970466)
chr7 (25-96)||(40690413-40690484)
chr7 (268-302)||(24793818-24793852)
chr7 (272-302)||(25038248-25038278)
chr7 (268-302)||(48985265-48985299)
chr7 (14-51)||(22194348-22194385)
chr7 (267-308)||(22194613-22194654)
chr7 (267-300)||(32126909-32126942)
[»] scaffold0007 (1 HSPs)
scaffold0007 (14-225)||(166114-166326)
[»] chr1 (58 HSPs)
chr1 (14-199)||(17786377-17786563)
chr1 (14-200)||(31471320-31471507)
chr1 (14-199)||(52930446-52930632)
chr1 (22-183)||(18317587-18317749)
chr1 (58-225)||(17676069-17676235)
chr1 (57-221)||(51523454-51523618)
chr1 (51-199)||(45242221-45242370)
chr1 (128-222)||(48927129-48927224)
chr1 (69-206)||(8471413-8471549)
chr1 (58-206)||(29524089-29524237)
chr1 (58-206)||(33167401-33167552)
chr1 (115-302)||(36303329-36303510)
chr1 (58-206)||(45363667-45363815)
chr1 (57-302)||(48384833-48385072)
chr1 (57-210)||(47297321-47297474)
chr1 (58-298)||(31159611-31159844)
chr1 (115-256)||(48729669-48729805)
chr1 (57-206)||(51156418-51156567)
chr1 (93-207)||(36231139-36231252)
chr1 (89-199)||(37419978-37420089)
chr1 (89-199)||(27630094-27630205)
chr1 (119-199)||(37646190-37646271)
chr1 (123-206)||(45455639-45455722)
chr1 (58-225)||(48407548-48407715)
chr1 (172-225)||(3754781-3754833)
chr1 (267-302)||(8464948-8464983)
chr1 (267-302)||(27629996-27630031)
chr1 (267-302)||(31471569-31471604)
chr1 (267-302)||(37419880-37419915)
chr1 (190-256)||(41542618-41542678)
chr1 (227-302)||(45623185-45623260)
chr1 (227-302)||(51494128-51494203)
chr1 (14-76)||(47297488-47297550)
chr1 (190-302)||(10265688-10265794)
chr1 (107-206)||(2474858-2474957)
chr1 (270-302)||(37646093-37646125)
chr1 (270-302)||(44450921-44450953)
chr1 (270-302)||(44651459-44651491)
chr1 (267-302)||(2474778-2474813)
chr1 (267-302)||(8471594-8471629)
chr1 (267-302)||(17786627-17786662)
chr1 (267-302)||(19578566-19578601)
chr1 (267-302)||(20584476-20584511)
chr1 (267-302)||(36231305-36231340)
chr1 (267-302)||(37690950-37690985)
chr1 (267-302)||(45242433-45242468)
chr1 (267-302)||(48927257-48927292)
chr1 (267-302)||(51156339-51156374)
chr1 (267-302)||(52930348-52930383)
chr1 (268-302)||(643506-643540)
chr1 (268-302)||(3754711-3754745)
chr1 (142-199)||(8464826-8464884)
chr1 (268-302)||(17675999-17676033)
chr1 (267-300)||(29524285-29524318)
chr1 (267-300)||(30878290-30878323)
chr1 (14-51)||(45242172-45242209)
chr1 (267-300)||(45363862-45363895)
chr1 (268-300)||(37822984-37823016)
[»] chr8 (54 HSPs)
chr8 (14-178)||(27392608-27392773)
chr8 (14-199)||(35101529-35101715)
chr8 (14-199)||(26748713-26748899)
chr8 (32-199)||(8449788-8449956)
chr8 (57-302)||(15056760-15056999)
chr8 (14-199)||(17744710-17744896)
chr8 (59-199)||(36912745-36912886)
chr8 (51-199)||(13817220-13817369)
chr8 (57-206)||(13947649-13947798)
chr8 (51-199)||(5213966-5214115)
chr8 (53-199)||(5736200-5736347)
chr8 (57-207)||(43523983-43524133)
chr8 (57-206)||(13783925-13784074)
chr8 (93-206)||(30529382-30529495)
chr8 (93-206)||(38204964-38205077)
chr8 (57-206)||(1633152-1633301)
chr8 (115-302)||(231589-231771)
chr8 (115-302)||(708000-708182)
chr8 (115-302)||(745212-745394)
chr8 (115-302)||(869107-869289)
chr8 (166-302)||(12272115-12272244)
chr8 (148-256)||(17494307-17494409)
chr8 (119-200)||(43617981-43618063)
chr8 (134-206)||(44503526-44503598)
chr8 (90-199)||(34955087-34955197)
chr8 (267-302)||(4625181-4625216)
chr8 (267-302)||(5736403-5736438)
chr8 (267-302)||(8449690-8449725)
chr8 (267-302)||(18029000-18029035)
chr8 (267-302)||(26631809-26631844)
chr8 (267-302)||(26748615-26748650)
chr8 (267-302)||(30470475-30470510)
chr8 (25-96)||(30529546-30529617)
chr8 (267-302)||(34954989-34955024)
chr8 (142-199)||(18029100-18029158)
chr8 (126-206)||(29731938-29732018)
chr8 (267-303)||(1954903-1954939)
chr8 (107-206)||(1954985-1955084)
chr8 (119-206)||(26244877-26244964)
chr8 (231-302)||(30289418-30289487)
chr8 (267-302)||(5214178-5214213)
chr8 (267-302)||(13817432-13817467)
chr8 (267-302)||(31129106-31129141)
chr8 (267-302)||(35101777-35101812)
chr8 (267-302)||(36912949-36912984)
chr8 (189-302)||(41477506-41477614)
chr8 (267-302)||(42860305-42860340)
chr8 (267-302)||(42861078-42861113)
chr8 (267-302)||(45100678-45100713)
chr8 (268-298)||(39810716-39810746)
chr8 (14-51)||(5213917-5213954)
chr8 (14-51)||(5736149-5736186)
chr8 (267-300)||(13783844-13783877)
chr8 (142-210)||(31129180-31129245)
[»] chr5 (51 HSPs)
chr5 (14-199)||(7827247-7827432)
chr5 (14-221)||(36609751-36609959)
chr5 (14-199)||(25033320-25033506)
chr5 (24-199)||(21367730-21367906)
chr5 (14-199)||(41152628-41152814)
chr5 (14-199)||(31011832-31012030)
chr5 (51-199)||(4580178-4580327)
chr5 (93-206)||(25670542-25670655)
chr5 (94-210)||(27405916-27406032)
chr5 (93-225)||(30644765-30644897)
chr5 (51-302)||(31011734-31011981)
chr5 (93-206)||(32363193-32363306)
chr5 (58-225)||(29616217-29616384)
chr5 (127-225)||(177400-177499)
chr5 (172-302)||(34529069-34529192)
chr5 (93-210)||(42804516-42804633)
chr5 (127-225)||(15972845-15972944)
chr5 (93-202)||(13479334-13479443)
chr5 (170-234)||(34918085-34918149)
chr5 (267-302)||(14279216-14279251)
chr5 (267-302)||(25033569-25033604)
chr5 (267-302)||(25653205-25653240)
chr5 (267-302)||(41152531-41152566)
chr5 (134-206)||(4219152-4219224)
chr5 (172-225)||(8681041-8681094)
chr5 (190-302)||(31008057-31008163)
chr5 (134-206)||(39008772-39008844)
chr5 (270-302)||(7827497-7827529)
chr5 (107-206)||(27945859-27945958)
chr5 (107-206)||(32973122-32973221)
chr5 (119-206)||(39238794-39238881)
chr5 (267-302)||(4580390-4580425)
chr5 (267-302)||(8176024-8176059)
chr5 (267-302)||(12913232-12913267)
chr5 (267-302)||(13592569-13592604)
chr5 (267-302)||(21368635-21368670)
chr5 (267-302)||(27946002-27946037)
chr5 (267-302)||(32973042-32973077)
chr5 (267-302)||(40892173-40892208)
chr5 (268-302)||(3455210-3455244)
chr5 (268-302)||(15972968-15973002)
chr5 (268-302)||(36572056-36572090)
chr5 (268-302)||(37882133-37882167)
chr5 (142-199)||(41263691-41263749)
chr5 (267-300)||(4219074-4219107)
chr5 (14-51)||(4580129-4580166)
chr5 (134-206)||(23089798-23089870)
chr5 (172-225)||(27407500-27407552)
chr5 (267-300)||(32363114-32363147)
chr5 (270-302)||(19241692-19241724)
chr5 (107-206)||(40892029-40892128)
[»] chr4 (69 HSPs)
chr4 (14-199)||(46914292-46914478)
chr4 (14-200)||(2212097-2212284)
chr4 (14-199)||(36658574-36658760)
chr4 (51-199)||(21654605-21654754)
chr4 (14-199)||(53181234-53181432)
chr4 (57-302)||(13113710-13113948)
chr4 (57-225)||(23539397-23539565)
chr4 (57-225)||(28901133-28901300)
chr4 (127-302)||(39048707-39048877)
chr4 (57-302)||(8994932-8995171)
chr4 (57-302)||(34463193-34463432)
chr4 (93-302)||(28901329-28901534)
chr4 (93-206)||(33607231-33607344)
chr4 (57-206)||(16171629-16171778)
chr4 (58-207)||(34434276-34434424)
chr4 (57-302)||(3529912-3530152)
chr4 (57-206)||(13093898-13094047)
chr4 (90-199)||(19409690-19409800)
chr4 (57-206)||(27864092-27864241)
chr4 (93-181)||(28447459-28447548)
chr4 (93-206)||(53347423-53347539)
chr4 (57-206)||(35809578-35809727)
chr4 (93-299)||(34198915-34199116)
chr4 (170-231)||(39532889-39532950)
chr4 (58-302)||(56054437-56054665)
chr4 (55-181)||(33077628-33077755)
chr4 (171-225)||(55666-55720)
chr4 (90-199)||(47749830-47749940)
chr4 (69-206)||(18469089-18469225)
chr4 (119-199)||(27141963-27142044)
chr4 (93-146)||(33523652-33523705)
chr4 (172-225)||(39113510-39113562)
chr4 (267-302)||(2212000-2212035)
chr4 (227-302)||(16021182-16021257)
chr4 (227-302)||(38173882-38173957)
chr4 (267-302)||(40596418-40596453)
chr4 (267-302)||(46914194-46914229)
chr4 (267-302)||(47749732-47749767)
chr4 (267-302)||(55408221-55408256)
chr4 (14-76)||(28901057-28901119)
chr4 (14-76)||(33607086-33607148)
chr4 (269-302)||(55601-55634)
chr4 (134-206)||(17329640-17329712)
chr4 (107-206)||(3614983-3615082)
chr4 (268-300)||(19409864-19409896)
chr4 (119-206)||(48403637-48403724)
chr4 (267-302)||(3614903-3614938)
chr4 (145-199)||(7401442-7401497)
chr4 (267-302)||(7401561-7401596)
chr4 (267-302)||(16171546-16171581)
chr4 (267-302)||(21047599-21047634)
chr4 (267-302)||(21654506-21654541)
chr4 (267-302)||(31336186-31336221)
chr4 (25-96)||(34434452-34434523)
chr4 (267-302)||(36658823-36658858)
chr4 (267-302)||(48506249-48506284)
chr4 (270-300)||(10090138-10090168)
chr4 (272-302)||(12159129-12159159)
chr4 (14-76)||(16171792-16171854)
chr4 (14-76)||(23539612-23539674)
chr4 (267-297)||(27141870-27141900)
chr4 (268-302)||(31848457-31848491)
chr4 (272-302)||(33527082-33527112)
chr4 (268-302)||(39113435-39113469)
chr4 (267-300)||(23389628-23389661)
chr4 (267-300)||(53347344-53347377)
chr4 (267-299)||(18469011-18469043)
chr4 (119-206)||(19273164-19273251)
chr4 (270-302)||(39532834-39532866)
[»] scaffold0758 (2 HSPs)
scaffold0758 (14-199)||(6471-6657)
scaffold0758 (267-302)||(6374-6409)
[»] chr2 (55 HSPs)
chr2 (14-302)||(926506-926789)
chr2 (14-199)||(2778902-2779088)
chr2 (14-199)||(8855131-8855317)
chr2 (14-199)||(31204766-31204952)
chr2 (11-196)||(36855160-36855346)
chr2 (14-199)||(39432513-39432699)
chr2 (14-199)||(31185040-31185238)
chr2 (57-221)||(6363577-6363741)
chr2 (51-199)||(12858060-12858209)
chr2 (14-199)||(30819420-30819618)
chr2 (59-199)||(37245831-37245972)
chr2 (51-302)||(30819322-30819569)
chr2 (14-199)||(9072723-9072921)
chr2 (57-302)||(22349556-22349795)
chr2 (57-206)||(7762916-7763065)
chr2 (111-210)||(16218469-16218569)
chr2 (68-202)||(17928945-17929079)
chr2 (57-206)||(5145111-5145260)
chr2 (51-302)||(9072625-9072872)
chr2 (58-210)||(4279281-4279433)
chr2 (93-206)||(36209196-36209309)
chr2 (69-158)||(39490326-39490415)
chr2 (171-225)||(9331409-9331463)
chr2 (119-199)||(4296405-4296486)
chr2 (170-235)||(43494990-43495055)
chr2 (166-302)||(1072716-1072846)
chr2 (14-96)||(4279204-4279286)
chr2 (267-302)||(1987525-1987560)
chr2 (267-302)||(4296307-4296342)
chr2 (267-302)||(8855380-8855415)
chr2 (227-302)||(14383312-14383387)
chr2 (267-302)||(36855060-36855095)
chr2 (267-302)||(43494921-43494956)
chr2 (227-302)||(44280459-44280534)
chr2 (134-206)||(17486106-17486178)
chr2 (180-225)||(28946441-28946486)
chr2 (107-206)||(7585268-7585367)
chr2 (270-302)||(31184942-31184974)
chr2 (267-302)||(6332953-6332988)
chr2 (267-302)||(7585188-7585223)
chr2 (267-302)||(9118207-9118242)
chr2 (267-302)||(12858272-12858307)
chr2 (270-301)||(31204669-31204700)
chr2 (267-302)||(36527203-36527238)
chr2 (267-302)||(37246035-37246070)
chr2 (267-302)||(43022075-43022110)
chr2 (268-302)||(39432416-39432450)
chr2 (267-300)||(1308337-1308370)
chr2 (134-206)||(1308415-1308487)
chr2 (269-302)||(2778801-2778834)
chr2 (267-300)||(7762839-7762872)
chr2 (14-51)||(12858011-12858048)
chr2 (267-300)||(17928861-17928894)
chr2 (267-299)||(5145027-5145059)
chr2 (170-210)||(6333020-6333059)
[»] scaffold1905 (3 HSPs)
scaffold1905 (58-302)||(107-345)
scaffold1905 (134-206)||(1168-1240)
scaffold1905 (267-300)||(1091-1124)
[»] scaffold0021 (3 HSPs)
scaffold0021 (57-206)||(109947-110096)
scaffold0021 (14-96)||(110123-110205)
scaffold0021 (267-302)||(109872-109907)
[»] scaffold0004 (1 HSPs)
scaffold0004 (57-205)||(106022-106170)
[»] scaffold1454 (1 HSPs)
scaffold1454 (68-206)||(468-606)
[»] scaffold0012 (1 HSPs)
scaffold0012 (166-302)||(124325-124455)
[»] scaffold1183 (1 HSPs)
scaffold1183 (267-302)||(26-61)


Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 257
Target Start/End: Original strand, 51974370 - 51974613
Alignment:
Q  11 caaaggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagatt 110  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  51974370 caaaggatgactggttgaaatttggtgcaaaatcaaaattaggtatgttttgaggacgttggttggaaaattgatctggattttgataattgttgagatt 51974469  T
Q  111 ttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagct 210  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |    
T  51974470 ttggtagctaaatgggtaattaaaagaattctgggtgttgaaatgattattattggatccatttcactgaaaagaatattaaaacttcaaaagaaaagtt 51974569  T
Q  211 gatagaaagataatagtaataataatattaagatagtgaaaaacttc 257  Q
     ||||||||||||   |||||||||||||||| ||||||||||||||    
T  51974570 aatagaaagataa---taataataatattaagttagtgaaaaacttc 51974613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 225
Target Start/End: Original strand, 21228254 - 21228466
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    |||||| || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||| |||||||    
T  21228254 aggatggctagttgaaatttggtgcaaaaccaaaattaggtatgttttgaggacgttggttggaaaattgatttggattttgataattgttgggattttg 21228353  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctga 212  Q
    ||||||||||| ||||||| ||||||||||||||||||||  |||||||||  ||||||||||||||||||||| ||||||| || |||||||||| | |    
T  21228354 gtagctaaatgcgtaattagaagaattatgggtgttgaaaaaattattattgggatccatttcactaaaaagaagattaaaattttaaaagaaaagttaa 21228453  T
Q  213 tagaaagataata 225  Q
    || ||| ||||||    
T  21228454 taaaaaaataata 21228466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 24 - 225
Target Start/End: Complemental strand, 21229536 - 21229334
Alignment:
Q  24 gttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaat 123  Q
    ||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||| |  ||||| |||||||||| ||||||| |||||||||    
T  21229536 gttgaaatttggtgcaaaaccaaaattaggtatgttttgaggaagttggttggaaaattgatttcgatttttataattgttgcgattttgatagctaaat 21229437  T
Q  124 gggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagata 222  Q
    ||||||||| ||||||| |||||||||||| ||||||||||  ||| ||||||||||||||||| ||||||||||| |||||||| || ||| |||||||    
T  21229436 gggtaattagaagaattttgggtgttgaaaggattattattgggattcatttcactaaaaagaagattaaaacttcgaaagaaaaactaatacaaagata 21229337  T
Q  223 ata 225  Q
    |||    
T  21229336 ata 21229334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 47147405 - 47147592
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    ||||||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||     
T  47147405 aggatgattggttgaaatttggtggaaaaccaaaattaggtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggattttc 47147504  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaa 200  Q
    |||| |||||||||||||| || |||| ||| |||||||||| ||||||||  |||||||||||||||||| || |||||||||||||    
T  47147505 gtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttcaa 47147592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 17469548 - 17469734
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    ||||||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||     
T  17469548 aggatgattggttgaaatttggtggaaaaccaaaattaggtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggattttc 17469647  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||||||||||| || |||| ||| |||||||||| ||||||||  |||||||||||||||||| || ||||||||||||    
T  17469648 gtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttca 17469734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 50034422 - 50034607
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||| ||| ||||||| ||||||     
T  50034422 aggatgactggttgaaatttggtgtaaaatcaaaattaggtatgttttgaggacgttggttgaaaaattgatttgaatttggat-attgttgggattttc 50034520  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||||||| ||| || |||| |||||||||||||| ||||||||  ||||||||| |||||||| || ||||||||||||    
T  50034521 gtagttaaatgggtagttagaataattttgggtgttgaaatggttattattgggatccatttaactaaaaataagattaaaacttca 50034607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 49822898 - 49822700
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatt------------atgtatgttttgaggacgttggttggaaaatagatctgaattttgataatt 101  Q
    |||||||||||||||||||||||| |||| |||||||            ||||||||||||||||||||||||| ||||| ||| || |||| |||||||    
T  49822898 aggatgactggttgaaatttggtggaaaaccaaaattaggtacgttttgatgtatgttttgaggacgttggttgaaaaattgatttggatttggataatt 49822799  T
Q  102 gttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||| |||| || ||||||||||| || |||| |||||||||||||||||||||||  |||||||||||| ||||| || ||||||||||||    
T  49822798 gttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatgattattattgagatccatttcacaaaaaataagattaaaacttca 49822700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 25787709 - 25787511
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatt------------atgtatgttttgaggacgttggttggaaaatagatctgaattttgataatt 101  Q
    |||||||||||||||||||||||| |||| |||||||            ||||||||||||||||||||||||  ||||| ||| || |||| |||||||    
T  25787709 aggatgactggttgaaatttggtgaaaaaccaaaattaggtacgttttgatgtatgttttgaggacgttggttataaaattgatttggatttggataatt 25787610  T
Q  102 gttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||| |||| || ||||||||||| || |||| |||||||||||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  25787609 gttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccatttcacaaaaaataagattaaaacttca 25787511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 25829666 - 25829468
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatt------------atgtatgttttgaggacgttggttggaaaatagatctgaattttgataatt 101  Q
    |||||||||||||||||||||||| |||| |||||||            ||||||||||||||||||||||||  ||||| ||| || |||| |||||||    
T  25829666 aggatgactggttgaaatttggtgaaaaaccaaaattaggtacgttttgatgtatgttttgaggacgttggttataaaattgatttggatttggataatt 25829567  T
Q  102 gttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||| |||| || ||||||||||| || |||| |||||||||||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  25829566 gttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccatttcacaaaaaataagattaaaacttca 25829468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 199
Target Start/End: Original strand, 33936356 - 33936505
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| |||||| |||| || ||||||||||| || | || |||||||||    
T  33936356 atgtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggattttcgtagttatatgggtaattagaaaatttttgggtgttg 33936455  T
Q  151 aaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  33936456 aaatggttattattgggatccatttcacaaaaaataagattaaaacttca 33936505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 302
Target Start/End: Original strand, 42564123 - 42564362
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||| |||| ||| ||  | ||||||||||||| ||||||||||||||||  |||||| | ||||||| ||||||||||| |||    
T  42564123 gttttgaggatgttggttgggaaattgatttgggtgttgataattgttgggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattga 42564222  T
Q  157 ttatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaact 255  Q
    || ||| |  |||||||||||||||| | || | ||||||||||||||||| ||| ||| ||||       ||||||||| ||||||| |||||||||||    
T  42564223 ttgttagtgggatccatttcactaaata-aacactaaaacttcaaaagaaaggctaatacaaag------ctaataataagattaagagagtgaaaaact 42564315  T
Q  256 tcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    | |        ||||||||||||||||||| | ||||||||||||||    
T  42564316 tgattttttttctgtgtccaaatcaaatgatctaagtctctatttat 42564362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 42598364 - 42598166
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatt------------atgtatgttttgaggacgttggttggaaaatagatctgaattttgataatt 101  Q
    |||||||||||||||||||||||| |||| |||||||            ||||||||||||||||||||||||  ||||| ||| || |||| ||||| |    
T  42598364 aggatgactggttgaaatttggtgaaaaaccaaaattaggtacgttttgatgtatgttttgaggacgttggttataaaattgatttggatttggataaat 42598265  T
Q  102 gttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||| |||| || ||||||||||| || |||| |||||||||||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  42598264 gttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccatttcacaaaaaataagattaaaacttca 42598166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 50020118 - 50020316
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgta------------tgttttgaggacgttggttggaaaatagatctgaattttgataatt 101  Q
    |||||||||||||||||||||||| ||||||||||||| |||            |||||||||||||||||||| ||||| ||| || |||| |||||||    
T  50020118 aggatgactggttgaaatttggtgtaaaatcaaaattaggtacattttgaggtatgttttgaggacgttggttgaaaaattgatttggatttggataatt 50020217  T
Q  102 gttgagattttggtagctaaatgggtaattaaaagaattatgggtg-ttgaaatgattattatttgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||||  ||||| |||| |||||||||||||| || |||| |||||| ||||||||||||||||| |   ||||| |||||||| || ||||||||||||    
T  50020218 gttggaattttcgtagttaaatgggtaattagaataattttgggtgtttgaaatgattattattgggatcattttactaaaaataagattaaaacttca 50020316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 302
Target Start/End: Original strand, 20139745 - 20139973
Alignment:
Q  68 gttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tg 166  Q
    ||||||||| |||| ||| ||  | ||||||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||| | |||||||||  |    
T  20139745 gttggttgggaaattgatttgggtgttgataattgttgcgattttggtagctaaatgggtaatcagaagaattttgggtgttgaattaattattattggg 20139844  T
Q  167 atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnnn 266  Q
    ||||||||||||||| | || | |||||||||| |||||||| | | ||||||       ||||||||| ||||||| |||||||||||| |            
T  20139845 atccatttcactaaata-aagactaaaacttcagaagaaaagttaagagaaag------ctaataataagattaagagagtgaaaaacttgatttttttt 20139937  T
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    || ||| |||||||||||| ||||||||||||||||    
T  20139938 ctctgttcaaatcaaatgatccaagtctctatttat 20139973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 57 - 302
Target Start/End: Complemental strand, 6045225 - 6044986
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||| |||| ||| ||  | ||||||||||||  ||||||||||||||||  |||||| | ||||||| ||||||||||| |||    
T  6045225 gttttgaggatgttggttgggaaattgatttgggtgttgataattgtttggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattga 6045126  T
Q  157 ttatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaact 255  Q
    || ||| |  |||||||||||||||| | || | ||||||||||||||||| ||| ||| ||||       |||| |||| ||||||| |||||||||||    
T  6045125 ttgttagtgggatccatttcactaaata-aacactaaaacttcaaaagaaaggctaatacaaag------ctaatgataagattaagagagtgaaaaact 6045033  T
Q  256 tcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    | |        ||||||||||||||||||| ||||||||||||||||    
T  6045032 tgattttttttctgtgtccaaatcaaatgatccaagtctctatttat 6044986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 53 - 199
Target Start/End: Original strand, 33751483 - 33751630
Alignment:
Q  53 gtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaa 152  Q
    |||||||||||||| |||||||| ||||| ||| || |||| ||||||||||| |||||| |||| |||||||||||||| || | || |||||||||||    
T  33751483 gtatgttttgaggatgttggttgaaaaattgatatggatttggataattgttgggattttcgtagttaaatgggtaattagaaaatttttgggtgttgaa 33751582  T
Q  153 atgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||| ||||||||  |||||||||||| ||||| || ||||||| ||||    
T  33751583 atggttattattgggatccatttcacaaaaaataagattaaaatttca 33751630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 77 - 302
Target Start/End: Original strand, 49086332 - 49086552
Alignment:
Q  77 aaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttc 175  Q
    ||||| ||| ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||| |||||||||||||| ||||||||  ||||||||||    
T  49086332 aaaattgatttgaatttggataattgttgggattttcgtagttaaatggataattagaataattttgggtgttgaaatggttattattgggatccatttc 49086431  T
Q  176 actaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnnnctgtgtcca 275  Q
    |||||||| || ||||||||||||        ||| |||||||||      ||||||||| || ||||||||||||||||| |        |||||||||    
T  49086432 actaaaaataagattaaaacttcacttagtttgctaatagaaaga------taataataagatgaagatagtgaaaaacttgattttttttctgtgtcca 49086525  T
Q  276 aatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||| |||||||||||    
T  49086526 aatcaaatgaaccaaatctctatttat 49086552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 302
Target Start/End: Complemental strand, 25787660 - 25787413
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || |||| ||||||||||| |||||| |||| || ||||||||||| || |||| |||||||||    
T  25787660 atgtatgttttgaggacgttggttataaaattgatttggatttggataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttg 25787561  T
Q  151 aaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtga 249  Q
    ||||| |||||||| | ||||||||||| ||||| || ||||||||||||        ||| ||||||||||||||      |||| || ||||||||||    
T  25787560 aaatggttattattgggatccatttcacaaaaaataagattaaaacttcacttagtttgctaatagaaagataata------ataagatgaagatagtga 25787467  T
Q  250 aaaacttcannnnnnnn-ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||           ||||||||||||||||||| ||||||||||||||||    
T  25787466 aaaacttggtttttttttctgtgtccaaatcaaatgatccaagtctctatttat 25787413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 302
Target Start/End: Complemental strand, 25829617 - 25829370
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || |||| ||||||||||| |||||| |||| || ||||||||||| || |||| |||||||||    
T  25829617 atgtatgttttgaggacgttggttataaaattgatttggatttggataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttg 25829518  T
Q  151 aaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtga 249  Q
    ||||| |||||||| | ||||||||||| ||||| || ||||||||||||        ||| ||||||||||||||      |||| || ||||||||||    
T  25829517 aaatggttattattgggatccatttcacaaaaaataagattaaaacttcacttagtttgctaatagaaagataata------ataagatgaagatagtga 25829424  T
Q  250 aaaacttcannnnnnnn-ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||           ||||||||||||||||||| ||||||||||||||||    
T  25829423 aaaacttggtttttttttctgtgtccaaatcaaatgatccaagtctctatttat 25829370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 33187994 - 33187841
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| |||||||| ||||| ||| ||  | ||||||||||||| |||||||||||||| ||||||| | | ||||||| ||||||||||| |||    
T  33187994 gttttgaggatgttggttgaaaaattgatttgggtgttgataattgttgggattttggtagctagatgggtagtcagaagaattttgggtgttgaattga 33187895  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagct 210  Q
    || |||||  |||||||||||||||| | || | |||||||||||||||||||||    
T  33187894 tttttattgggatccatttcactaaata-aagactaaaacttcaaaagaaaagct 33187841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 48886678 - 48886565
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatatta 191  Q
    ||||||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||| ||||||||||| | ||||||||||||||| | || | ||    
T  48886678 ttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgattattattggaatccatttcactaaaca-aagacta 48886580  T
Q  192 aaacttcaaaagaaa 206  Q
    |||||||||||||||    
T  48886579 aaacttcaaaagaaa 48886565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 49027301 - 49027152
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || |||||||||||||| ||| ||  | ||||||||||||| ||||||||||||||||||| |||| | || |||| ||||||||||| |||    
T  49027301 gttttgaagatgttggttggaaaattgatttgggtgttgataattgttgggattttggtagctaaatggataatcagaaaaattttgggtgttgaattga 49027202  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  |||||||||||||||| | || | |||||||||||||||||    
T  49027201 ttattattaggatccatttcactaaaca-aagactaaaacttcaaaagaaa 49027152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 51 - 199
Target Start/End: Original strand, 51435795 - 51435944
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || |||| ||||||||||| |||||| |||| || ||||||||||| || | || |||||||||    
T  51435795 atgtatgttttgaggacgttggttataaaattgatttggatttggataattgttgggattttcgtagttatatgggtaattagaaaatttttgggtgttg 51435894  T
Q  151 aaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    | ||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  51435895 agatggttattattgggatccatttcacaaaaaataagattaaaacttca 51435944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 12975028 - 12975166
Alignment:
Q  68 gttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tg 166  Q
    |||||||||||||| ||| |   | ||||||||||||| |||||||||||||||||||||||| | ||||||| |||||||| || |||||||||||  |    
T  12975028 gttggttggaaaattgatttaggtgttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttaaattgattattattggg 12975127  T
Q  167 atccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||||||||| | || | |||||||||||||||||    
T  12975128 atccatttcactaaaca-aagactaaaacttcaaaagaaa 12975166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 51 - 302
Target Start/End: Complemental strand, 42598315 - 42598068
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || |||| ||||| ||||| |||||| |||| || ||||||||||| || |||| |||||||||    
T  42598315 atgtatgttttgaggacgttggttataaaattgatttggatttggataaatgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttg 42598216  T
Q  151 aaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtga 249  Q
    ||||| |||||||| | ||||||||||| ||||| || ||||||||||||        ||| ||||||||||||||      |||| || ||||||||||    
T  42598215 aaatggttattattgggatccatttcacaaaaaataagattaaaacttcacttagtttgctaatagaaagataata------ataagatgaagatagtga 42598122  T
Q  250 aaaacttcannnnnnnn-ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||           ||||||||||||||||||| ||||||||||||||||    
T  42598121 aaaacttggtttttttttctgtgtccaaatcaaatgatccaagtctctatttat 42598068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 302
Target Start/End: Complemental strand, 15493588 - 15493434
Alignment:
Q  142 tgggtgttgaaatgattattatttga-tccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatatta 240  Q
    ||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||    |||||||||      |||| |||||||||    
T  15493588 tgggtgttgaaatgattattattggaatctatttcactaaaaagaagattaaaacttcaaaagaaaactcaatagaaaga------taatgataatatta 15493495  T
Q  241 agatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    | ||||||||||||||          || |||||||||||||||||||||||||||||||||    
T  15493494 aaatagtgaaaaactt-ggtttttttctatgtccaaatcaaatgaaccaagtctctatttat 15493434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 26162421 - 26162272
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || |||||||||||||| ||| ||  | ||||||||||||| ||||||| |||| ||||||||||| | ||||||| | |||||| || |||    
T  26162421 gttttgaagatgttggttggaaaattgatttgggtgttgataattgttgggattttgatagccaaatgggtaatcagaagaatttttggtgttaaattga 26162322  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  |||||||||||||||| | || | |||||||||||||||||    
T  26162321 ttattattgggatccatttcactaaaca-aagactaaaacttcaaaagaaa 26162272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 36178364 - 36178215
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || |||||||||||||| ||| ||  | ||||||||||||| ||||||||||||||||||  |||| | ||||||| | ||||||||| |||    
T  36178364 gttttgaagatgttggttggaaaattgatttggctgttgataattgttgggattttggtagctaaatgaataatcagaagaattttaggtgttgaattga 36178265  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  ||||||||| |||||| | || | |||||||||||||||||    
T  36178264 ttattattgagatccattttactaaaca-aagactaaaacttcaaaagaaa 36178215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 43475603 - 43475756
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||  |||| ||| ||  | ||||||||||||| |||||||||||||||||||||||| | ||||||| || |||||||| |||    
T  43475603 gttttgaggatgttggttgtgaaattgatttgggtgttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgagtgttgaattga 43475702  T
Q  157 ttatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagct 210  Q
    || ||| |  ||| |||||||||||| | || | |||||||||||||||||||||    
T  43475703 ttgttagtgggattcatttcactaaata-aagactaaaacttcaaaagaaaagct 43475756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 51304746 - 51304895
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | ||||||||||| | |||||||||||||||||| ||||| | ||||||| ||||||||||| |||    
T  51304746 gttttgaagatgttggttgggaaattgatttggttgttgataattgtagggattttggtagctaaatgagtaatcagaagaattttgggtgttgaattga 51304845  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  ||||||||| |||||| | || | |||||||||||||||||    
T  51304846 ttattattgggatccattttactaaaca-aagactaaaacttcaaaagaaa 51304895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 5844885 - 5844774
Alignment:
Q  89 aattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaat 187  Q
    ||||| ||||||||||| |||||| |||| |||||||||||||| || |||| ||| |||||||||| ||||||||  |||||||||||||||||| ||     
T  5844885 aatttggataattgttgggattttcgtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataag 5844786  T
Q  188 attaaaacttca 199  Q
    ||||||| ||||    
T  5844785 attaaaatttca 5844774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 53 - 199
Target Start/End: Original strand, 42602041 - 42602188
Alignment:
Q  53 gtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaa 152  Q
    ||||| |||||||| |||| ||| ||||| ||| || |||| ||||||||||  ||||||  ||| |||||||||||||| || |||| |||||||| ||    
T  42602041 gtatgctttgaggatgttgattgaaaaattgatttggatttggataattgttaggattttcatagttaaatgggtaattagaataattttgggtgttaaa 42602140  T
Q  153 atgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||| ||||||||  |||| ||||||||||||| || ||||||||||||    
T  42602141 atggttattattgggatctatttcactaaaaataagattaaaacttca 42602188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 30688821 - 30688657
Alignment:
Q  17 atgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggta 116  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||                   ||||||||  ||||| |||    
T  30688821 atgactggttgaaatttggtgtaaaaccaaaattaagtatgttttgaggacgttggttgaaa-------------------aattgttggaattttcgta 30688741  T
Q  117 gctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    | |||||||||||||| || |||| |||||||||||||| ||||||||  ||||||||||| |||||| || ||||||||||||    
T  30688740 gttaaatgggtaattagaataattttgggtgttgaaatggttattattgggatccatttcattaaaaataagattaaaacttca 30688657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 10424549 - 10424382
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||  |||| ||| ||  | ||||||||||||| ||||||||||||||||  |||||| | ||||||| ||||||| ||| |||    
T  10424549 gttttgaggatgttggttgagaaattgatttgggtgttgataattgttgggattttggtagctaaaatggtaatcagaagaattttgggtgtggaattga 10424450  T
Q  157 ttatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataat 224  Q
    || ||| |  |||||||||||||||| | || | ||||||||||||||||| ||| ||| |||| ||||    
T  10424449 ttgttagtgggatccatttcactaaata-aacactaaaacttcaaaagaaaggctaatacaaagctaat 10424382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 53722792 - 53722855
Alignment:
Q  170 catttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataat 233  Q
    ||||||||||||||||| |||||||||| |||||||||||| |||||||||||||| |||||||    
T  53722792 catttcactaaaaagaagattaaaactttaaaagaaaagctaatagaaagataataataataat 53722855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 47700749 - 47700683
Alignment:
Q  145 gtgttgaaatgattattatttga-tccatttcactaaaaagaatattaaaacttcaaaagaaaagct 210  Q
    |||||||||||||||||||| || |||||||||||||||||||  ||||||||||||||||||||||    
T  47700749 gtgttgaaatgattattattggaatccatttcactaaaaagaagtttaaaacttcaaaagaaaagct 47700683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 302
Target Start/End: Original strand, 55027050 - 55027179
Alignment:
Q  166 gatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnn 265  Q
    |||||||||||||||| | || | |||||||| |||||||||||| |||||||||      ||||||||||||||||| ||||||||||||             
T  55027050 gatccatttcactaaata-aagactaaaactttaaaagaaaagctaatagaaaga------taataataatattaagagagtgaaaaacttggttttttt 55027142  T
Q  266 nctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
     ||||||||||||||||||| ||||||||||||||||    
T  55027143 tctgtgtccaaatcaaatgatccaagtctctatttat 55027179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 49027399 - 49027328
Alignment:
Q  25 ttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttga 96  Q
    |||||||||| |||||||||||||||| |||||||||||||| |||| ||||||||| ||| || |||||||    
T  49027399 ttgaaatttgatgcaaaatcaaaattaggtatgttttgaggatgttgattggaaaattgatttggattttga 49027328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 35540393 - 35540298
Alignment:
Q  115 tagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagct 210  Q
    |||||||||| ||||| | ||||||| ||| ||||||| |||||||||||  ||| |||||||||||| | || |||||||||||||||||||||||    
T  35540393 tagctaaatgagtaatcataagaattttggatgttgaattgattattattgagattcatttcactaaata-aagattaaaacttcaaaagaaaagct 35540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 46572737 - 46572613
Alignment:
Q  172 tttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaactt-cannnnnnnnctgt 270  Q
    |||||||||||| || ||||||||||||||||||||||| ||||||||||      ||||| || ||||||||||||||||||||            |||    
T  46572737 tttcactaaaaa-aagattaaaacttcaaaagaaaagctaatagaaagat------aataacaagattaagatagtgaaaaacttggtttttttttttgt 46572645  T
Q  271 gtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||    
T  46572644 gtccaaatcaaatgaaccaagtctctatttat 46572613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 25450294 - 25450236
Alignment:
Q  142 tgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttca 199  Q
    ||||||||||||||||||||||| | ||||||||||||||||| || ||||||||||||    
T  25450294 tgggtgttgaaatgattattattgggatccatttcactaaaaataagattaaaacttca 25450236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 11908301 - 11908373
Alignment:
Q  134 aagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||| | || | |||||||||||||||||    
T  11908301 aagaattatgggtgttgaattgattattattgggatccatttcactaaaga-aagactaaaacttcaaaagaaa 11908373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 49407129 - 49407053
Alignment:
Q  134 aagaattatgggtgtt-gaaatgattattatttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagct 210  Q
    ||||||| |||||||| ||| ||||||||||| |||||||||||||||| | || | |||||||||||||||||||||    
T  49407129 aagaattttgggtgttagaattgattattattagatccatttcactaaata-aagactaaaacttcaaaagaaaagct 49407053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 5844711 - 5844676
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  5844711 ctgtgtccaaatcaaatgaaccaagtctctatttat 5844676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 17469797 - 17469832
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  17469797 ctgtgtccaaatcaaatgaaccaagtctctatttat 17469832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 25450173 - 25450138
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  25450173 ctgtgtccaaatcaaatgaaccaagtctctatttat 25450138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 28410775 - 28410810
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  28410775 ctgtgtccaaatcaaatgaaccaagtctctatttat 28410810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 35852931 - 35852896
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  35852931 ctgtgtccaaatcaaatgaaccaagtctctatttat 35852896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 42602251 - 42602286
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  42602251 ctgtgtccaaatcaaatgaaccaagtctctatttat 42602286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 43022984 - 43023019
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  43022984 ctgtgtccaaatcaaatgaaccaagtctctatttat 43023019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 47147654 - 47147689
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  47147654 ctgtgtccaaatcaaatgaaccaagtctctatttat 47147689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 50034673 - 50034708
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  50034673 ctgtgtccaaatcaaatgaaccaagtctctatttat 50034708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 51998969 - 51998894
Alignment:
Q  227 taataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||| ||||||| |||||||||||| |        ||||||||||||||||||| ||||||||||||||||    
T  51998969 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttat 51998894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 301
Target Start/End: Complemental strand, 49356978 - 49356944
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattta 301  Q
    |||||||||||||||||||||||||||||||||||    
T  49356978 ctgtgtccaaatcaaatgaaccaagtctctattta 49356944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 7520914 - 7520873
Alignment:
Q  166 gatccatttcactaaaaagaatattaaaacttcaaaagaaaa 207  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  7520914 gatccatttcactaaaaagaaatttaaaacttcaaaagaaaa 7520873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 30415294 - 30415195
Alignment:
Q  107 gattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaa 205  Q
    |||||||||||||||| ||||||| | ||||||| ||||||||| | ||||| ||| |  |||||||||||||||  | || | ||||||||||||||||    
T  30415294 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaatta-aagactaaaacttcaaaagaa 30415196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 4873846 - 4873811
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4873846 ctgtgtccaaatcaaatgatccaagtctctatttat 4873811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 26162228 - 26162193
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  26162228 ctgtgtccaaatcaaatgatccaagtctctatttat 26162193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 30415150 - 30415115
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30415150 ctgtgtccaaatcaaatgatccaagtctctatttat 30415115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 32120127 - 32120092
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  32120127 ctgtgtccaaatcaaatgatccaagtctctatttat 32120092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 33751694 - 33751729
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||| ||||||||||||||||||||||||||||||    
T  33751694 ctgtgcccaaatcaaatgaaccaagtctctatttat 33751729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 33934935 - 33934900
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  33934935 ctgtgtccaaatcaaatgatccaagtctctatttat 33934900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 37182757 - 37182722
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  37182757 ctgtgtccaaatcaaatgatccaagtctctatttat 37182722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 37410177 - 37410142
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||| |||||||||||||||||||||||    
T  37410177 ctgtgtccaaattaaatgaaccaagtctctatttat 37410142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 38571836 - 38571801
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  38571836 ctgtgtccaaatcaaatgatccaagtctctatttat 38571801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 41183652 - 41183687
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  41183652 ctgtgtccaaatcaaatgatccaagtctctatttat 41183687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 44084690 - 44084725
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  44084690 ctgtgtccaaatcaaatgatccaagtctctatttat 44084725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 49147010 - 49146975
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||| |||||||||||    
T  49147010 ctgtgtccaaatcaaatgaaccaattctctatttat 49146975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 49710193 - 49710158
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||| ||||||||||||||||||||||||||||    
T  49710193 ctgtgtcaaaatcaaatgaaccaagtctctatttat 49710158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 50734397 - 50734432
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  50734397 ctgtgtccaaatcaaatgatccaagtctctatttat 50734432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 50778458 - 50778423
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  50778458 ctgtgtccaaatcaaatgatccaagtctctatttat 50778423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 53722873 - 53722908
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||| ||||||||||||||    
T  53722873 ctgtgtccaaatcaaatgaacaaagtctctatttat 53722908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 4874109 - 4874047
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttgg 76  Q
    ||||||| || ||||||||||  |||||| |||||||| | |||||||||||| |||||||||    
T  4874109 aggatgagtgattgaaatttgaggcaaaaccaaaattaggcatgttttgaggatgttggttgg 4874047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Complemental strand, 26549932 - 26549898
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||| |||||||    
T  26549932 tgtgtccaaatcaaatgaaccaagtctttatttat 26549898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Complemental strand, 30862497 - 30862467
Alignment:
Q  272 tccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||||||||||    
T  30862497 tccaaatcaaatgaaccaagtctctatttat 30862467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Original strand, 50020377 - 50020411
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||| |||||||||||||||||||||||||||||    
T  50020377 tgtgttcaaatcaaatgaaccaagtctctatttat 50020411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 302
Target Start/End: Complemental strand, 7520818 - 7520785
Alignment:
Q  269 gtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||| ||||||||||||||||||    
T  7520818 gtgtccaaatcaaataaaccaagtctctatttat 7520785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Original strand, 11908419 - 11908452
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  11908419 ctgtgtccaaatcaaatgatccaagtctctattt 11908452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Original strand, 12975210 - 12975243
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  12975210 ctgtgtccaaatcaaatgatccaagtctctattt 12975243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 31169954 - 31169921
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  31169954 ctgtgtccaaatcaaatgatccaagtctctattt 31169921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 33751432 - 33751469
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatta 51  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  33751432 aggatgattggttgaaatttggtgcaaaaccaaaatta 33751469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 33936307 - 33936344
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatta 51  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  33936307 aggatgactggttgaaatttggtggaaaaccaaaatta 33936344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 35472006 - 35471973
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  35472006 ctgtgtccaaatcaaatgatccaagtctctattt 35471973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 51435746 - 51435783
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatta 51  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  51435746 aggatgactggttgaaatttggtgaaaaaccaaaatta 51435783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 27847819 - 27847918
Alignment:
Q  107 gattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaa 205  Q
    |||||||||||||||| |||||||   ||||||| ||||||||| | ||||| ||| |  |||||||||||||||  | || | ||||||||||||||||    
T  27847819 gattttggtagctaaaagggtaatctgaagaattttgggtgttggattgattgttagtgggatccatttcactaatta-aagactaaaacttcaaaagaa 27847917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 31170086 - 31169999
Alignment:
Q  119 taaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    |||||||||||| | ||||||| ||| ||||||| |||||||||||  ||| |||||||||||| | || | ||||||||||| |||||    
T  31170086 taaatgggtaatcagaagaattttggctgttgaattgattattattgggattcatttcactaaaca-aagactaaaacttcaagagaaa 31169999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 39291089 - 39291117
Alignment:
Q  274 caaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||||||||    
T  39291089 caaatcaaatgaaccaagtctctatttat 39291117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 4e-72; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 7540347 - 7540544
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    |||||| |||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||| ||| || |||||||||||||||| |||||||    
T  7540347 aggatgcctggttgaaatttggtgcaaaaccaaaattaggtatgttttgaggacattggttggaaaattgatttggattttgataattgttgggattttg 7540446  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagct 210  Q
    |||||||||||| |||||| |||||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||    
T  7540447 gtagctaaatggataattagaagaattatgggtgttgaaaggattattattgggatccatttcactaaaaagaagattaaaacttcaaaagaaaagct 7540544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 14 - 225
Target Start/End: Original strand, 24115182 - 24115395
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaa-ttatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagatttt 112  Q
    ||||||| |||||||||| || ||||||| ||||| ||| | |||||||||||| ||||||||| |||| ||| || || ||||||||||||  ||||||    
T  24115182 aggatgaatggttgaaatctgatgcaaaaccaaaaattaggcatgttttgaggatgttggttgggaaattgatttggatgttgataattgtttggatttt 24115281  T
Q  113 ggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctg 211  Q
    ||||||||||| |||| | | ||||||| |||||||||||||||||||||||  |||||||||||||||||| || | ||||| |||||||||||||||     
T  24115282 ggtagctaaataggtattcagaagaattctgggtgttgaaatgattattattgggatccatttcactaaaaaaaagactaaaagttcaaaagaaaagcta 24115381  T
Q  212 atagaaagataata 225  Q
    |||||||| |||||    
T  24115382 atagaaagctaata 24115395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 6377431 - 6377233
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatt------------atgtatgttttgaggacgttggttggaaaatagatctgaattttgataatt 101  Q
    |||||||||||||||||||||||| |||| |||||||            ||||||||||||||||||||||||  ||||| ||| || |||| |||||||    
T  6377431 aggatgactggttgaaatttggtgaaaaaccaaaattaggtacgttttgatgtatgttttgaggacgttggttataaaattgatttggatttggataatt 6377332  T
Q  102 gttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||| |||| || ||||||||||| || |||| |||||||||||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  6377331 gttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccatttcacaaaaaataagattaaaacttca 6377233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 225
Target Start/End: Original strand, 12502055 - 12502255
Alignment:
Q  25 ttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatg 124  Q
    ||||||||||  |||||| |||||||| | |||||||||||| |||  |||| |||| ||| ||  | ||||||||||||| ||||||||||||||||||    
T  12502055 ttgaaatttgaggcaaaaccaaaattaggcatgttttgaggatgttaattgggaaattgatttgggtgttgataattgttgggattttggtagctaaatg 12502154  T
Q  125 ggtaattaaaagaattatgggtgttgaaatgattattattt-gatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataa 223  Q
    | |||  | || |||| ||||||||||| ||||| |||||| |||||||||||||||| | || | ||||||||||||||||||||| || ||||| |||    
T  12502155 gataagcagaataattttgggtgttgaattgattgttatttggatccatttcactaaata-aagactaaaacttcaaaagaaaagctaatggaaagttaa 12502253  T
Q  224 ta 225  Q
    ||    
T  12502254 ta 12502255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 17958299 - 17958101
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatt------------atgtatgttttgaggacgttggttggaaaatagatctgaattttgataatt 101  Q
    |||||||||||||||||||||||| |||| |||||||            ||||||||||||||||||||||||  ||||| ||| || |||| |||||||    
T  17958299 aggatgactggttgaaatttggtgaaaaaccaaaattaggtacgttttgatgtatgttttgaggacgttggttataaaattgatttggatttggataatt 17958200  T
Q  102 gttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||| |||| || ||||||||||| || |||| |||||||||||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  17958199 gttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccatttcacaaaaaataagattaaaacttca 17958101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 302
Target Start/End: Complemental strand, 6377382 - 6377135
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || |||| ||||||||||| |||||| |||| || ||||||||||| || |||| |||||||||    
T  6377382 atgtatgttttgaggacgttggttataaaattgatttggatttggataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttg 6377283  T
Q  151 aaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtga 249  Q
    ||||| |||||||| | ||||||||||| ||||| || ||||||||||||        ||| ||||||||||||||      |||| || ||||||||||    
T  6377282 aaatggttattattgggatccatttcacaaaaaataagattaaaacttcacttagtttgctaatagaaagataata------ataagatgaagatagtga 6377189  T
Q  250 aaaacttcannnnnnnn-ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||           ||||||||||||||||||| ||||||||||||||||    
T  6377188 aaaacttggtttttttttctgtgtccaaatcaaatgatccaagtctctatttat 6377135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 302
Target Start/End: Complemental strand, 17958250 - 17958003
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || |||| ||||||||||| |||||| |||| || ||||||||||| || |||| |||||||||    
T  17958250 atgtatgttttgaggacgttggttataaaattgatttggatttggataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttg 17958151  T
Q  151 aaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtga 249  Q
    ||||| |||||||| | ||||||||||| ||||| || ||||||||||||        ||| ||||||||||||||      |||| || ||||||||||    
T  17958150 aaatggttattattgggatccatttcacaaaaaataagattaaaacttcacttagtttgctaatagaaagataata------ataagatgaagatagtga 17958057  T
Q  250 aaaacttcannnnnnnn-ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||           ||||||||||||||||||| ||||||||||||||||    
T  17958056 aaaacttggtttttttttctgtgtccaaatcaaatgatccaagtctctatttat 17958003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 51 - 199
Target Start/End: Original strand, 634851 - 635000
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || |||| ||||||||||| |||||| |||  |  ||||||||||| || |||| |||||||||    
T  634851 atgtatgttttgaggacgttggttataaaattgatttggatttggataattgttgggattttcgtatttttatgggtaattagaaaaattttgggtgttg 634950  T
Q  151 aaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  634951 aaatggttattattgggatccatttcacaaaaaataagattaaaacttca 635000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 58 - 225
Target Start/End: Original strand, 8222291 - 8222458
Alignment:
Q  58 ttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgat 157  Q
    ||||||||| ||||| ||| |||| ||| ||  | ||||||||||||| ||||||||||||||||||| |||| | ||||||| |||| |||||| ||||    
T  8222291 ttttgaggatgttggctgggaaattgatttgggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttgggcgttgaattgat 8222390  T
Q  158 tattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    | ||||| | ||||||||||||||| | | |  ||||||||||||||||||||| |||||||| |||||    
T  8222391 tgttattgggatccatttcactaaata-atttctaaaacttcaaaagaaaagctaatagaaagttaata 8222458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 199
Target Start/End: Complemental strand, 29951978 - 29951829
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || | || ||||||||||| |||||| |||| || ||||||||||| || | || |||||||||    
T  29951978 atgtatgttttgaggacgttggttaaaaaattgatttggaattagataattgttgggattttcgtagttatatgggtaattagaaaatttttgggtgttg 29951879  T
Q  151 aaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||||  ||||||||  |||||||||||| ||||| || ||||||||||||    
T  29951878 aaatagttattattgggatccatttcacaaaaaataagattaaaacttca 29951829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 57 - 302
Target Start/End: Original strand, 12513201 - 12513443
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagc---taaatgggtaattaaaagaattatgggtgttgaaa 153  Q
    |||||||||| ||||||||| |||| ||| || || ||||||||||||| ||||||| ||||   |||||||||||| | ||||||| | | |||||||     
T  12513201 gttttgaggatgttggttggcaaattgatttggatgttgataattgttgggattttgatagctaataaatgggtaatcagaagaattttagatgttgaat 12513300  T
Q  154 tgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaa 252  Q
    ||||| |||||  |||||||||||||||| | || | ||||||||||||| ||||||| || |||||       ||||||||| ||||||| ||||||||    
T  12513301 tgattgttattgggatccatttcactaaata-aagactaaaacttcaaaataaaagctaatggaaag------ttaataataagattaagagagtgaaaa 12513393  T
Q  253 acttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||          ||||||||||||||||||| | ||||||||||||||    
T  12513394 acttggttttttttctgtgtccaaatcaaatgatcaaagtctctatttat 12513443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 18642444 - 18642582
Alignment:
Q  68 gttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tg 166  Q
    ||||||||| |||| ||| ||  | ||||||||||||| |||||||||||||||| |  |||| | ||||||| ||||||||||| |||||||||||  |    
T  18642444 gttggttgggaaattgatttgggtgttgataattgttgggattttggtagctaaaagtataatgagaagaattttgggtgttgaattgattattattggg 18642543  T
Q  167 atccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||||||||| | || | |||||||||||||||||    
T  18642544 atccatttcactaaaca-aagactaaaacttcaaaagaaa 18642582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 34328607 - 34328718
Alignment:
Q  89 aattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaat 187  Q
    ||||| ||||||||||| |||||| |||| |||||||||||||| || |||| ||| |||||||||| ||||||||  |||||||||||||||||| ||     
T  34328607 aatttggataattgttgggattttcgtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataag 34328706  T
Q  188 attaaaacttca 199  Q
    ||||||| ||||    
T  34328707 attaaaatttca 34328718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 26654039 - 26653890
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | ||||| || || |||||||||||||||||||| ||||| | ||||||| ||||||||||| |||    
T  26654039 gttttgaagatgttggttgggaaattgatttggctgttgatgatcgtagagattttggtagctaaatgagtaatcagaagaattttgggtgttgaattga 26653940  T
Q  157 ttattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    |||||||| | |||||||| |||||| | || | |||||||||||||||||    
T  26653939 ttattattggaatccattttactaaaca-aagactaaaacttcaaaagaaa 26653890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 26760008 - 26759859
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | ||||| || || |||||||||||||||||||| ||||| | ||||||| ||||||||||| |||    
T  26760008 gttttgaagatgttggttgggaaattgatttggctgttgatgatcgtagagattttggtagctaaatgagtaatcagaagaattttgggtgttgaattga 26759909  T
Q  157 ttattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    |||||||| | |||||||| |||||| | || | |||||||||||||||||    
T  26759908 ttattattggaatccattttactaaaca-aagactaaaacttcaaaagaaa 26759859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 34242598 - 34242748
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | ||||||||||||| ||||||||||||||||||| |||| | ||||||| |||||| |||| |||    
T  34242598 gttttgaagatgttggttgggaaattgatttgggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttgggtgctgaattga 34242697  T
Q  157 ttattatttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagct 210  Q
    ||||  |  |||||||||||||||  | || | |||||||||||||||||||||    
T  34242698 ttat--tgggatccatttcactaagta-aagactaaaacttcaaaagaaaagct 34242748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 2503582 - 2503663
Alignment:
Q  119 taaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||||||||||||| || |||| ||| |||||||||| ||||||||  |||||||||||||||||| || ||||||| ||||    
T  2503582 taaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataagattaaaatttca 2503663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 198208 - 198243
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  198208 ctgtgtccaaatcaaatgaaccaagtctctatttat 198243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 2503726 - 2503761
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  2503726 ctgtgtccaaatcaaatgaaccaagtctctatttat 2503761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 6725362 - 6725327
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  6725362 ctgtgtccaaatcaaatgaaccaagtctctatttat 6725327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 10886581 - 10886656
Alignment:
Q  227 taataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||| ||||||| |||||||||||| |        ||||||||||||||||||| ||||||||||||||||    
T  10886581 taataataagattaagagagtgaaaaacttaattttttttctgtgtccaaatcaaatgatccaagtctctatttat 10886656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 32360089 - 32360164
Alignment:
Q  227 taataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||| ||||||||||||||||||||          |||||||||||||||||||| |||||||||||||||    
T  32360089 taataataagattaagatagtgaaaaacttggttttttttctgtgtccaaatcaaatgaatcaagtctctatttat 32360164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 34328781 - 34328816
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  34328781 ctgtgtccaaatcaaatgaaccaagtctctatttat 34328816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 198072 - 198144
Alignment:
Q  128 aattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttca 199  Q
    ||||| || |||| ||| |||||||||| |||||||| | ||||||||||||||||| || ||||||||||||    
T  198072 aattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttca 198144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 34841714 - 34841813
Alignment:
Q  107 gattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaa 205  Q
    |||||||||||||||| ||||||| | ||||||| ||||||||| | ||||| ||| |  |||||||||||||||  | || | ||||||||||||||||    
T  34841714 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaatta-aagactaaaacttcaaaagaa 34841812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 635063 - 635098
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  635063 ctgtgtccaaatcaaatgatccaagtctctatttat 635098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 7541324 - 7541359
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||| |||||||||||    
T  7541324 ctgtgtccaaatcaaatgaaccaaatctctatttat 7541359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 8668817 - 8668852
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8668817 ctgtgtccaaatcaaatgatccaagtctctatttat 8668852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 34841858 - 34841893
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  34841858 ctgtgtccaaatcaaatgatccaagtctctatttat 34841893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 634802 - 634839
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatta 51  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  634802 aggatgactggttgaaatttggtgaaaaaccaaaatta 634839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Original strand, 24348859 - 24348892
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  24348859 ctgtgtccaaatcaaatgatccaagtctctattt 24348892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 34242519 - 34242571
Alignment:
Q  44 caaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttga 96  Q
    |||||||| | |||||||||||| |||||||||||||| ||| || |||||||    
T  34242519 caaaattaggcatgttttgaggatgttggttggaaaattgatttggattttga 34242571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 4e-66; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 11 - 225
Target Start/End: Complemental strand, 1939865 - 1939650
Alignment:
Q  11 caaaggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagatt 110  Q
    |||||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| |  |||||||||||||||| ||||    
T  1939865 caaagggtgacttgttgaaatttggtgcaaaaccaaaattaggtatgttttgaggacgttggttggaaaattgatttcgattttgataattgttgggatt 1939766  T
Q  111 ttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagc 209  Q
    |||||| |||||||| |||||| ||||||| || ||||||||||||||||||||  ||||||||||||||||||||| ||||| |||||||||||||| |    
T  1939765 ttggtaactaaatggataattagaagaattctgagtgttgaaatgattattattgggatccatttcactaaaaagaagattaacacttcaaaagaaaaac 1939666  T
Q  210 tgatagaaagataata 225  Q
    | ||||||| ||||||    
T  1939665 taatagaaaaataata 1939650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 5813410 - 5813596
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    ||||||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||     
T  5813410 aggatgattggttgaaatttggtggaaaaccaaaattaggtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggattttc 5813509  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||||||||||| || |||| ||| |||||||||| ||||||||  |||||||||||||||||| || ||||||||||||    
T  5813510 gtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttca 5813596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 197
Target Start/End: Complemental strand, 25218243 - 25218047
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgta------------tgttttgaggacgttggttggaaaatagatctgaattttgataatt 101  Q
    ||||||||||||||||||||||||||||| |||||||| |||            |||||||||||||||||||| ||||| ||| || ||||  ||||||    
T  25218243 aggatgactggttgaaatttggtgcaaaaccaaaattaggtacgttttgaggtatgttttgaggacgttggttgaaaaattgatttggatttgaataatt 25218144  T
Q  102 gttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaactt 197  Q
    |||| |||||| |||| |||||||||||||| || |||| |||||||||||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  25218143 gttgggattttcgtagttaaatgggtaattagaaaaattttgggtgttgaaatgattattattgggatccatttcacaaaaaataatattaaaactt 25218047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 58 - 302
Target Start/End: Complemental strand, 40300827 - 40300589
Alignment:
Q  58 ttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgat 157  Q
    ||||||||| ||||||||| |||| ||| ||  | ||||||||||||| |||||||||||||||| | ||||| | ||||||| ||||||||||| ||||    
T  40300827 ttttgaggatgttggttggtaaattgatttgggtgttgataattgttgggattttggtagctaaaagagtaatcagaagaattttgggtgttgaattgat 40300728  T
Q  158 tatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaactt 256  Q
    | ||| | ||||||||||||||||| | |||| ||||||||||||||||||||| ||| ||||       ||||||||| ||||||| | ||||||||||    
T  40300727 tgttagtgtgatccatttcactaaata-aatactaaaacttcaaaagaaaagctaatacaaag------ctaataataagattaagagaatgaaaaactt 40300635  T
Q  257 cannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
     |        ||||||||||||||||||| ||||||||||||||||    
T  40300634 gattttttttctgtgtccaaatcaaatgatccaagtctctatttat 40300589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 57 - 299
Target Start/End: Original strand, 22660060 - 22660296
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||| |||| ||| ||  | |||||||||||||| ||||||||||||||| ||||||| | ||||||| ||| ||||||| |||    
T  22660060 gttttgaggatgttggttgggaaattgatttgggtgttgataattgttgaaattttggtagctaaaagggtaatcagaagaattttggatgttgaattga 22660159  T
Q  157 ttatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaact 255  Q
    || ||| |  |||||||||||||||| | |||| ||||||||||||||||||||| ||| ||||       ||||||||| ||||||| |||||||||||    
T  22660160 ttgttagtgggatccatttcactaaata-aatactaaaacttcaaaagaaaagctaatacaaag------ctaataataagattaagagagtgaaaaact 22660252  T
Q  256 tcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatt 299  Q
    | |        ||||||||||||||||||| |||||||||||||    
T  22660253 tgattttttttctgtgtccaaatcaaatgatccaagtctctatt 22660296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 199
Target Start/End: Original strand, 22194397 - 22194546
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || |||| ||||||||||| |||||| |||| || ||||||||||| || |||| |||||||||    
T  22194397 atgtatgttttgaggacgttggttataaaattgatttggatttggataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttg 22194496  T
Q  151 aaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  22194497 aaatggttattattgggatccatttcacaaaaaataagattaaaacttca 22194546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 30630587 - 30630389
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatta------------tgtatgttttgaggacgttggttggaaaatagatctgaattttgataatt 101  Q
    ||||||||||||||||||||||||||||| ||||||||            |||||||||||||||||||||||| ||||| ||| || | || |||||||    
T  30630587 aggatgactggttgaaatttggtgcaaaaccaaaattaggtacgttttgatgtatgttttgaggacgttggttgaaaaattgatttggacttggataatt 30630488  T
Q  102 gttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||| |||| || ||||||||||| || | || |||||||||||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  30630487 gttgggattttcgtagttatatgggtaattagaaaatttttgggtgttgaaatggttattattgggatccatttcacaaaaaataagattaaaacttca 30630389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 302
Target Start/End: Original strand, 42881781 - 42882020
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||| |||| ||| ||  | ||||||||||||  ||||||||||||||||  |||||| | ||||||| ||||||||||| |||    
T  42881781 gttttgaggatgttggttgggaaattgatttgggtgttgataattgtttggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattga 42881880  T
Q  157 ttatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaact 255  Q
    || ||| |  |||||||||||||||| | || | ||||||||||||||||| ||| ||| ||||       |||| |||| ||||||| |||||||||||    
T  42881881 ttgttagtgggatccatttcactaaata-aacactaaaacttcaaaagaaaggctaatacaaag------ctaatgataagattaagagagtgaaaaact 42881973  T
Q  256 tcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    | |        ||||||||||||||||||| |||| |||||||||||    
T  42881974 tgattttttttctgtgtccaaatcaaatgatccaaatctctatttat 42882020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 32749139 - 32749288
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | |||||||||||||  |||||| |||||||||||||||| | ||||||| |||||||| || |||    
T  32749139 gttttgaagatgttggttgggaaattgatttgggtgttgataattgttggaattttgatagctaaatgggtaatcagaagaattttgggtgttaaattga 32749238  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  |||||||||||||||| | || | |||||||||||||||||    
T  32749239 ttattattgggatccatttcactaaaca-aagactaaaacttcaaaagaaa 32749288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 40690511 - 40690660
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | |||||||||||||  |||||| |||||||||||||||| | ||||||| |||||||| || |||    
T  40690511 gttttgaagatgttggttgggaaattgatttgggtgttgataattgttggaattttgatagctaaatgggtaatcagaagaattttgggtgttaaattga 40690610  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  |||||||||||||||| | || | |||||||||||||||||    
T  40690611 ttattattgggatccatttcactaaata-aagactaaaacttcaaaagaaa 40690660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 57 - 205
Target Start/End: Complemental strand, 32127136 - 32126988
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | ||||||||||||| ||||||| |||| ||||||||||| | ||||||| |||||||| || |||    
T  32127136 gttttgaagatgttggttgggaaattgatttgggtgttgataattgttgggattttgatagccaaatgggtaatcagaagaattttgggtgttaaattga 32127037  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaa 205  Q
    ||||||||  |||||||||||||||| | || | ||||||||||||||||    
T  32127036 ttattattgggatccatttcactaaaca-aagactaaaacttcaaaagaa 32126988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 114900 - 115015
Alignment:
Q  95 gataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaa 193  Q
    ||||||||||| ||||||||||||||||||| |||| | ||||||| | | ||||||| |||||||||||  |||||||||||||||| | || | ||||    
T  114900 gataattgttgggattttggtagctaaatggctaatcagaagaattttagatgttgaattgattattattgggatccatttcactaaata-aagactaaa 114998  T
Q  194 acttcaaaagaaaagct 210  Q
    |||||||||||||||||    
T  114999 acttcaaaagaaaagct 115015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 26815311 - 26815460
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | ||||||||||||| ||||||| |||| ||||| ||||| | ||||||| |||||||| || |||    
T  26815311 gttttgaagatgttggttgggaaattgatttgggtgttgataattgttgggattttgatagccaaatgagtaatcagaagaattttgggtgttaaattga 26815410  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  |||||||||||||||| | || | |||||||||||||||||    
T  26815411 ttattattgggatccatttcactaaaca-aagactaaaacttcaaaagaaa 26815460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 194
Target Start/End: Original strand, 33379493 - 33379598
Alignment:
Q  90 attttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaata 188  Q
    |||| |||||||||||||||||| |||| || ||||||||||| || |||| |||||||||||||  ||||||||  |||||||||||||||||| || |    
T  33379493 atttggataattgttgagattttcgtagttagatgggtaattagaaaaattttgggtgttgaaattgttattattgggatccatttcactaaaaataaga 33379592  T
Q  189 ttaaaa 194  Q
    ||||||    
T  33379593 ttaaaa 33379598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 107 - 210
Target Start/End: Complemental strand, 43201773 - 43201669
Alignment:
Q  107 gattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaa 205  Q
    ||||||||||||||||||  |||| | ||||||| || ||||| ||||||||||||||  |||||||||||||||||| |  | ||||||||||||||||    
T  43201773 gattttggtagctaaatgaataatcagaagaattctgagtgttcaaatgattattattgggatccatttcactaaaaaaatgactaaaacttcaaaagaa 43201674  T
Q  206 aagct 210  Q
    |||||    
T  43201673 aagct 43201669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 302
Target Start/End: Complemental strand, 35192890 - 35192760
Alignment:
Q  166 gatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnn 265  Q
    |||||||||||||||||||||  |||||||||||||||||| | |  |||||||||      |||||||| ||||||||||||||||||||             
T  35192890 gatccatttcactaaaaagaagtttaaaacttcaaaagaaaggttactagaaagat------aataataagattaagatagtgaaaaacttggttttttt 35192797  T
Q  266 nctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
     ||| ||||||||||||| ||||||||||||||||||    
T  35192796 tctgagtccaaatcaaataaaccaagtctctatttat 35192760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 33078649 - 33078532
Alignment:
Q  108 attttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||||||||||| ||||| | ||||||| ||||||||||| ||||| | | |  |||||||||||||||| | || | |||||||||||||||||    
T  33078649 attttggtagctaaatgagtaatcagaagaattttgggtgttgaattgattgtcagtgggatccatttcactaaata-aagactaaaacttcaaaagaaa 33078551  T
Q  207 agctgatagaaagataata 225  Q
    | || |||||||| |||||    
T  33078550 aactaatagaaagctaata 33078532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 45549272 - 45549124
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | ||||||||||| | ||||||||||||||||||  |||| | ||||||| ||||| ||||| |||    
T  45549272 gttttgaagatgttggttgggaaattgatttggctgttgataattgtagggattttggtagctaaatgattaatcagaagaattttgggt-ttgaattga 45549174  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  ||||||||| |||||| | || | |||||||||||||||||    
T  45549173 ttattattgggatccattttactaaaca-aagactaaaacttcaaaagaaa 45549124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 39769976 - 39770063
Alignment:
Q  119 taaatgggtaattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||| |||| | ||||||| ||||||||||| ||||||||||||| ||||||||||||||| | || | |||||||||||||||||    
T  39769976 taaatggataatcagaagaattttgggtgttgaattgattattatttgaatccatttcactaaaca-aagactaaaacttcaaaagaaa 39770063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 302
Target Start/End: Complemental strand, 28317899 - 28317737
Alignment:
Q  134 aagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataa 232  Q
    ||||||| ||||||||||| ||||| ||| | | | ||||||||||||| | || | ||||||||||||||||| ||| ||| |||| |||||      |    
T  28317899 aagaattttgggtgttgaattgattgttagtgggacccatttcactaaata-aacactaaaacttcaaaagaaaggctaatacaaagctaata------a 28317807  T
Q  233 taatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||| ||||||| |||||||||||| |        ||||||||||||||||||| ||||||||||||||||    
T  28317806 taagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttat 28317737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 38970313 - 38970389
Alignment:
Q  134 aagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagct 210  Q
    ||||||| ||||||||||| |||||||||||  |||||||||||||||| | || | |||||||||||||||||||||    
T  38970313 aagaattttgggtgttgaattgattattattgagatccatttcactaaata-aagactaaaacttcaaaagaaaagct 38970389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 5813659 - 5813694
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  5813659 ctgtgtccaaatcaaatgaaccaagtctctatttat 5813694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 35028511 - 35028476
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  35028511 ctgtgtccaaatcaaatgaaccaagtctctatttat 35028476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 37888761 - 37888796
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  37888761 ctgtgtccaaatcaaatgaaccaagtctctatttat 37888796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 43570833 - 43570798
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  43570833 ctgtgtccaaatcaaatgaaccaagtctctatttat 43570798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 2414625 - 2414575
Alignment:
Q  90 attttgataattgttgagattttggtagctaaatgggtaattaaaagaatt 140  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| |||||||    
T  2414625 attttgataattgttgcaattttggtacctaaatgggtaattagaagaatt 2414575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 24793690 - 24793748
Alignment:
Q  142 tgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttca 199  Q
    |||||||||||||| |||||||| | ||||||||||||||||| || ||||||||||||    
T  24793690 tgggtgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttca 24793748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 302
Target Start/End: Original strand, 33379667 - 33379701
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||||||||||||||    
T  33379667 tgtgtccaaatcaaatgaaccaagtctctatttat 33379701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 40690707 - 40690745
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttattga 305  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  40690707 ctgtgtccaaatcaaatgatccaagtctctatttattga 40690745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 302
Target Start/End: Complemental strand, 33508418 - 33508258
Alignment:
Q  134 aagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataa 232  Q
    ||||||| ||||||||||| ||||| ||||| | ||||||||||||||| | || | ||||||||||||||||||| | || |||||       ||||||    
T  33508418 aagaattttgggtgttgaattgattgttattgggatccatttcactaaata-aagactaaaacttcaaaagaaaagttaatggaaag------ttaataa 33508326  T
Q  233 taatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||| ||| ||| |||||||||||| |        ||||||||||||||||||| ||||||||||||||||    
T  33508325 taagatt-agaaagtgaaaaacttga-tttttttctgtgtccaaatcaaatgatccaagtctctatttat 33508258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 35028638 - 35028574
Alignment:
Q  137 aattatgggtgttgaaatgattattatttg--atccatttcactaaaaagaatattaaaacttca 199  Q
    |||| ||| |||||||||| ||||||||||  ||||||||||||||||| || ||||||||||||    
T  35028638 aattttggttgttgaaatggttattatttgggatccatttcactaaaaataagattaaaacttca 35028574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 36521734 - 36521833
Alignment:
Q  107 gattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaa 205  Q
    |||||||||||||||| ||||||| | ||||||| ||||||||| | ||||| ||| |  |||||||||||||||  | || | ||||||||||||||||    
T  36521734 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaatta-aagactaaaacttcaaaagaa 36521832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 25217981 - 25217946
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||| |||||||||||    
T  25217981 ctgtgtccaaatcaaatgaaccaaatctctatttat 25217946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 26815505 - 26815540
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  26815505 ctgtgtccaaatcaaatgatccaagtctctatttat 26815540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 30630326 - 30630291
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30630326 ctgtgtccaaatcaaatgatccaagtctctatttat 30630291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 36521878 - 36521913
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  36521878 ctgtgtccaaatcaaatgatccaagtctctatttat 36521913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 38970431 - 38970466
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  38970431 ctgtgtccaaatcaaatgatccaagtctctatttat 38970466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 40690413 - 40690484
Alignment:
Q  25 ttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttga 96  Q
    |||||||||| ||||||| |||||||| | |||||||||||| |||| |||| |||| ||| || |||||||    
T  40690413 ttgaaatttgatgcaaaaccaaaattaggcatgttttgaggatgttgattgggaaattgatttggattttga 40690484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Original strand, 24793818 - 24793852
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||| |||||||||||||||||||    
T  24793818 tgtgtccaaatcaaacgaaccaagtctctatttat 24793852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Complemental strand, 25038278 - 25038248
Alignment:
Q  272 tccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||||||||||    
T  25038278 tccaaatcaaatgaaccaagtctctatttat 25038248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Original strand, 48985265 - 48985299
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||| ||||||||||||||||    
T  48985265 tgtgtccaaatcaaatgatccaagtctctatttat 48985299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 22194348 - 22194385
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatta 51  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  22194348 aggatgactggttgaaatttggtgaaaaaccaaaatta 22194385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 22194613 - 22194654
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttattgatga 308  Q
    ||||||||||||||||||| |||||||| ||||||| |||||    
T  22194613 ctgtgtccaaatcaaatgatccaagtctttatttatagatga 22194654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 32126942 - 32126909
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  32126942 ctgtgtccaaatcaaatgatccaagtctctattt 32126909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 225
Target Start/End: Complemental strand, 166326 - 166114
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    |||||| ||||||||||| || ||||||| |||||||| |||| ||||||||||||||||||||  || ||| ||||||||||||||||||| |||||||    
T  166326 aggatggctggttgaaatgtgatgcaaaaccaaaattaggtatattttgaggacgttggttggacgattgatttgaattttgataattgttgggattttg 166227  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctga 212  Q
    |||| ||||||| ||||||  |||||| |||||||||||| ||||||||||  ||| ||||||||||||||||| |||||||||||||||||||| || |    
T  166226 gtagttaaatggataattagcagaattttgggtgttgaaaggattattattgagattcatttcactaaaaagaagattaaaacttcaaaagaaaaactaa 166127  T
Q  213 tagaaagataata 225  Q
    |||||||||||||    
T  166126 tagaaagataata 166114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 17786377 - 17786563
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||     
T  17786377 aggatgactggttgaaatttggtgcaaaatcaaaattaggtacgttttgaggacgttggttgaaaaattgatttgcatttggataattgttgggattttc 17786476  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattattt-gatccatttcactaaaaagaatattaaaacttca 199  Q
     ||| ||||||||||||||||| |||| |||||||||||||| ||||||||| |||||||||||| ||||| || ||||||| ||||    
T  17786477 atagttaaatgggtaattaaaaaaattttgggtgttgaaatggttattatttggatccatttcacaaaaaataagattaaaatttca 17786563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 31471320 - 31471507
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    ||||||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||     
T  31471320 aggatgattggttgaaatttggtggaaaaccaaaattaggtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggattttc 31471419  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaa 200  Q
    |||| |||||||||||||| || |||| ||| |||||||||| ||||||||  |||||||||||||||||| || |||||||||||||    
T  31471420 gtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttcaa 31471507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 52930632 - 52930446
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||     
T  52930632 aggatgactggttgaaatttggtgcaaaaccaaaattaggtacgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggattttc 52930533  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| ||||||| |||||| || |||| |||||||||||||| ||||||||  ||| |||||||| ||||| || ||||||||||||    
T  52930532 gtagttaaatggataattagaaaaattttgggtgttgaaatggttattattgggatacatttcacaaaaaataagattaaaacttca 52930446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 22 - 183
Target Start/End: Complemental strand, 18317749 - 18317587
Alignment:
Q  22 tggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaa 121  Q
    ||||||||||||| ||||||| |||||||| | |||||||||||| ||||||||| |||| ||| || || ||||||||||||| |||||||||||||||    
T  18317749 tggttgaaatttgatgcaaaaccaaaattaggcatgttttgaggatgttggttgggaaattgatttggatgttgataattgttgggattttggtagctaa 18317650  T
Q  122 atgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaa 183  Q
    ||||||||| | ||||||| |||||||| ||||||||||||||  ||||||||||||||||||    
T  18317649 atgggtaatcagaagaattctgggtgtttaaatgattattattgggatccatttcactaaaaa 18317587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 58 - 225
Target Start/End: Complemental strand, 17676235 - 17676069
Alignment:
Q  58 ttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgat 157  Q
    ||||||||| ||||||||  |||| ||| ||  | ||||||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||| ||||    
T  17676235 ttttgaggatgttggttgtgaaattgatttgggtgttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgat 17676136  T
Q  158 tattatttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    | ||||| |||||||||||||||| | || | ||||||||||||||||||||| || ||||| |||||    
T  17676135 tgttattggatccatttcactaaata-aagactaaaacttcaaaagaaaagctaatggaaagctaata 17676069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 51523454 - 51523618
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||| |||| ||| ||  | ||||||||||||| |||||||||||||||||||||||| | || |||| ||||||||||| |||    
T  51523454 gttttgaggatgttggttgggaaattgatttgggtattgataattgttgggattttggtagctaaatgggtaatcataaaaattttgggtgttgaattga 51523553  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagat 221  Q
    ||||||||  |||||||||||||||| | || | ||||||||||||||||||||| ||| ||||||    
T  51523554 ttattattgggatccatttcactaaata-aagactaaaacttcaaaagaaaagctaataaaaagat 51523618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 199
Target Start/End: Original strand, 45242221 - 45242370
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || |||| ||||||||||| |||||| |||| || ||||||||||| || |||| |||||||||    
T  45242221 atgtatgttttgaggacgttggttataaaattgatttggatttggataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttg 45242320  T
Q  151 aaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  45242321 aaatggttattattgggatccatttcacaaaaaataagattaaaacttca 45242370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 48927129 - 48927224
Alignment:
Q  128 aattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagata 222  Q
    ||||| ||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  48927129 aattagaagaattttgggtgttgaaatgattattattgggatccatttcactaaaaagaatattaaaacttcaaatgaaaagctaatagaaagata 48927224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 69 - 206
Target Start/End: Original strand, 8471413 - 8471549
Alignment:
Q  69 ttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatttgat 168  Q
    ||||||||||||| ||| ||  | ||||||||| ||| | |||||||||||||||||||||||| ||||||| ||||||||||| ||||| ||||| |||    
T  8471413 ttggttggaaaattgatttgggtgttgataattattggggttttggtagctaaatgggtaattagaagaattttgggtgttgaattgattgttattggat 8471512  T
Q  169 ccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||||||| | || | |||||||||||||||||    
T  8471513 ccatttcactaaata-aagactaaaacttcaaaagaaa 8471549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 58 - 206
Target Start/End: Original strand, 29524089 - 29524237
Alignment:
Q  58 ttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgat 157  Q
    |||||| || ||||||||| |||| ||| ||  | ||||||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||| ||||    
T  29524089 ttttgaagatgttggttgggaaattgatttgggtgttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgat 29524188  T
Q  158 tattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    |||||||  ||| |||||||||||| | || |||||||||||||||||||    
T  29524189 tattattgggatacatttcactaaaca-aagattaaaacttcaaaagaaa 29524237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 58 - 206
Target Start/End: Original strand, 33167401 - 33167552
Alignment:
Q  58 ttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgat 157  Q
    ||||||||| ||| |||||||||| ||| ||  | ||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||||||||| ||||    
T  33167401 ttttgaggatgtttgttggaaaattgatttgggtgttgataattgttgggatttcggtagctaaatgggtaatcaaaagaattttgggtgttgaattgat 33167500  T
Q  158 tattattt----gatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    |||||||     |||||||||||||||| | || | |||||||||||||||||    
T  33167501 tattattattgggatccatttcactaaaca-aagactaaaacttcaaaagaaa 33167552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 115 - 302
Target Start/End: Original strand, 36303329 - 36303510
Alignment:
Q  115 tagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgat 213  Q
    ||||||||||  |||||| ||||||| | | ||||||||||||||||||| | ||||||||||||||||||||  ||||||||||||||||||| || ||    
T  36303329 tagctaaatgattaattagaagaattctagatgttgaaatgattattattgggatccatttcactaaaaagaagtttaaaacttcaaaagaaaaactaat 36303428  T
Q  214 agaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||| ||      ||||||||| |||||||||||||||||||| |         ||||||||||| |||||||||||||| ||||||||    
T  36303429 agaagga------taataataagattaagatagtgaaaaacttgattttttttatgtgtccaaattaaatgaaccaagtc-ctatttat 36303510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 58 - 206
Target Start/End: Original strand, 45363667 - 45363815
Alignment:
Q  58 ttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgat 157  Q
    ||||||||| ||||||||| |||| ||| ||  | ||||||||||||| ||||||||||||||||||||||||   ||||||| ||||||||||| | ||    
T  45363667 ttttgaggatgttggttgggaaattgatttgggtgttgataattgttgggattttggtagctaaatgggtaatctgaagaattttgggtgttgaatttat 45363766  T
Q  158 tattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    |||||||  |||||||||||||||| | || | |||||||||||||||||    
T  45363767 tattattgggatccatttcactaaaca-aagactaaaacttcaaaagaaa 45363815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 302
Target Start/End: Complemental strand, 48385072 - 48384833
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||| |||| ||| ||  | ||||||||||||  ||||||||||||||||  |||||| | ||||||| ||||||||||| |||    
T  48385072 gttttgaggatgttggttgggaaattgatttgggtgttgataattgtttggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattga 48384973  T
Q  157 ttatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaact 255  Q
    || ||| |  |||||||||||||||| | || | ||||||||||||||||| ||| ||| ||||       |||| |||| ||||||| |||||||||||    
T  48384972 ttgttagtgggatccatttcactaaata-aacactaaaacttcaaaagaaaggctaatacaaag------ctaatgataagattaagagagtgaaaaact 48384880  T
Q  256 tcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    | |        ||| ||||||||||||||| ||||||||||||||||    
T  48384879 tgattttttttctgcgtccaaatcaaatgatccaagtctctatttat 48384833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 47297474 - 47297321
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||  |||| ||| ||| | ||||||||||||| |||||||||||| ||||| ||||| | ||||||| ||||||||||| |||    
T  47297474 gttttgaggatgttggttgagaaattgatttgagtgttgataattgttgggattttggtagccaaatgagtaatcagaagaattttgggtgttgaattga 47297375  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagct 210  Q
    || |||||  ||||||||||||| || | || | |||||||||||||||||||||    
T  47297374 ttgttattgagatccatttcactgaata-aagactaaaacttcaaaagaaaagct 47297321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 298
Target Start/End: Original strand, 31159611 - 31159844
Alignment:
Q  58 ttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgat 157  Q
    ||||||||| |||||||||||||| ||| ||  | ||||||||||||| ||||||||||||||||  | ||||   ||||||| ||||||||||| ||||    
T  31159611 ttttgaggatgttggttggaaaattgatttgggtgttgataattgttgggattttggtagctaaaatgataatcggaagaattttgggtgttgaattgat 31159710  T
Q  158 tatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaactt 256  Q
    | ||| |  |||||||||||||||| | || | ||||||||||||||||| ||| ||| ||||       ||||||||| ||||||| ||||||||||||    
T  31159711 tgttagtgggatccatttcactaaata-aacactaaaacttcaaaagaaatgctaatacaaag------ctaataataagattaagagagtgaaaaactt 31159803  T
Q  257 cannnnnnnnctgtgtccaaatcaaatgaaccaagtctctat 298  Q
     |        ||||||||||||||||||| ||||||||||||    
T  31159804 ga-tttttttctgtgtccaaatcaaatgatccaagtctctat 31159844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 115 - 256
Target Start/End: Original strand, 48729669 - 48729805
Alignment:
Q  115 tagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgat 213  Q
    ||||||||||  |||||| ||||||| | | ||||||||||||||||||| | ||||||||||||||||||||  ||||||||||||||||||| || ||    
T  48729669 tagctaaatgattaattagaagaattctagatgttgaaatgattattattgggatccatttcactaaaaagaagtttaaaacttcaaaagaaaaactaat 48729768  T
Q  214 agaaagataatagtaataataatattaagatagtgaaaaactt 256  Q
    |||| ||      |||| |||| ||||||||||||||||||||    
T  48729769 agaagga------taatgataagattaagatagtgaaaaactt 48729805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 51156567 - 51156418
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | |||||||||||||  |||||| |||||||||||||||| | ||||||| |||||||| || |||    
T  51156567 gttttgaagatgttggttgggaaattgatttgggtgttgataattgttggaattttgatagctaaatgggtaatcagaagaattttgggtgttaaattga 51156468  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  |||||||||||||||| | || | |||||||||||||||||    
T  51156467 ttattattgagatccatttcactaaaca-aagactaaaacttcaaaagaaa 51156418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 93 - 207
Target Start/End: Original strand, 36231139 - 36231252
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatatta 191  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||| ||||||||||| || || |||||  |||||||||||||||| | || | ||    
T  36231139 ttgataattgttgggattttggtagctaaatgggtaatttgaagaattttgggtgttgaactg-ttgttattgggatccatttcactaaata-aagacta 36231236  T
Q  192 aaacttcaaaagaaaa 207  Q
    ||||||||||||||||    
T  36231237 aaacttcaaaagaaaa 36231252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 37420089 - 37419978
Alignment:
Q  89 aattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaat 187  Q
    ||||| ||||||||||| |||||| |||| |||||||||||||| || |||| ||| |||||||||| ||||||||  |||||||||||||||||| ||     
T  37420089 aatttggataattgttgggattttcgtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataag 37419990  T
Q  188 attaaaacttca 199  Q
    ||||||| ||||    
T  37419989 attaaaatttca 37419978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 27630205 - 27630094
Alignment:
Q  89 aattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaat 187  Q
    ||||| ||||||||||| |||||| |||| ||||| |||||||| || |||| ||  |||||||||| ||||||||  |||||||||||||||||| ||     
T  27630205 aatttggataattgttgggattttcgtagttaaataggtaattagaataattttgtttgttgaaatggttattattgggatccatttcactaaaaataag 27630106  T
Q  188 attaaaacttca 199  Q
    ||||||| ||||    
T  27630105 attaaaatttca 27630094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 37646271 - 37646190
Alignment:
Q  119 taaatgggtaattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttca 199  Q
    |||||||||||||| || |||| ||| |||||||||| |||||||| | ||||||||||||||||| || ||||||||||||    
T  37646271 taaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttca 37646190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 206
Target Start/End: Complemental strand, 45455722 - 45455639
Alignment:
Q  123 tgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    |||||||| ||||||||| ||||||||||| |||||||||||  |||||||||||||||| | || | |||||||||||||||||    
T  45455722 tgggtaatcaaaagaattttgggtgttgaattgattattattgggatccatttcactaaaca-aagactaaaacttcaaaagaaa 45455639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 225
Target Start/End: Original strand, 48407548 - 48407715
Alignment:
Q  58 ttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgat 157  Q
    ||||||||| ||||||||| |||| ||| ||  | ||||||||||||| ||||||||||| |||| ||||||| | || | || ||||||||||| | ||    
T  48407548 ttttgaggatgttggttgggaaattgatttgggtgttgataattgttgggattttggtagttaaaagggtaatcagaaaatttttgggtgttgaattaat 48407647  T
Q  158 tatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    | ||| |  || || |||||||||| | || | ||||||||||||||||||||| ||| |||| |||||    
T  48407648 tgttagtgggacccgtttcactaaata-aagactaaaacttcaaaagaaaagctaatacaaagttaata 48407715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 3754833 - 3754781
Alignment:
Q  172 tttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    |||||||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  3754833 tttcactaaaaa-aatattaaaacttcaaaagaaaaactaatagaaagataata 3754781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 8464948 - 8464983
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  8464948 ctgtgtccaaatcaaatgaaccaagtctctatttat 8464983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 27630031 - 27629996
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  27630031 ctgtgtccaaatcaaatgaaccaagtctctatttat 27629996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 31471569 - 31471604
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  31471569 ctgtgtccaaatcaaatgaaccaagtctctatttat 31471604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 37419915 - 37419880
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  37419915 ctgtgtccaaatcaaatgaaccaagtctctatttat 37419880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 41542618 - 41542678
Alignment:
Q  190 taaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaactt 256  Q
    ||||||||||||||||||||| |||||||||      ||||||| ||||||||||||||||||||||    
T  41542618 taaaacttcaaaagaaaagctaatagaaaga------taataatgatattaagatagtgaaaaactt 41542678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 45623260 - 45623185
Alignment:
Q  227 taataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||| ||||||| |||||||||||| |        ||||||||||||||||||| ||||||||||||||||    
T  45623260 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttat 45623185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 51494203 - 51494128
Alignment:
Q  227 taataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||| ||||||| |||||||||||| |        ||||||||||||||||||| ||||||||||||||||    
T  51494203 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttat 51494128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 47297550 - 47297488
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttgg 76  Q
    ||||||| || ||||||||||  ||||||||||||||| | |||||||||||| |||||||||    
T  47297550 aggatgagtgattgaaatttgaggcaaaatcaaaattaggcatgttttgaggatgttggttgg 47297488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 302
Target Start/End: Complemental strand, 10265794 - 10265688
Alignment:
Q  190 taaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaacca 289  Q
    ||||||||||||||||||||| |||||||| |||||      |||| ||||||| ||||||||  || |        ||||||||||||||||||| |||    
T  10265794 taaaacttcaaaagaaaagctaatagaaagctaata------ataagattaagagagtgaaaattttgattttttttctgtgtccaaatcaaatgatcca 10265701  T
Q  290 agtctctatttat 302  Q
    |||||||||||||    
T  10265700 agtctctatttat 10265688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 2474957 - 2474858
Alignment:
Q  107 gattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaa 205  Q
    |||||||||||||||| ||||||| | ||||||| ||||||||| | ||||| ||| |  |||||||||||||||  | || | ||||||||||||||||    
T  2474957 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaatta-aagactaaaacttcaaaagaa 2474859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 37646125 - 37646093
Alignment:
Q  270 tgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||||||||||||    
T  37646125 tgtccaaatcaaatgaaccaagtctctatttat 37646093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 44450953 - 44450921
Alignment:
Q  270 tgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||||||||||||    
T  44450953 tgtccaaatcaaatgaaccaagtctctatttat 44450921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 302
Target Start/End: Original strand, 44651459 - 44651491
Alignment:
Q  270 tgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||||||||||||    
T  44651459 tgtccaaatcaaatgaaccaagtctctatttat 44651491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 2474813 - 2474778
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  2474813 ctgtgtccaaatcaaatgatccaagtctctatttat 2474778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 8471594 - 8471629
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8471594 ctgtgtccaaatcaaatgatccaagtctctatttat 8471629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 17786627 - 17786662
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||| |||||||||||||||||||||||||||||    
T  17786627 ctgtgtacaaatcaaatgaaccaagtctctatttat 17786662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 19578601 - 19578566
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19578601 ctgtgtccaaatcaaatgatccaagtctctatttat 19578566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 20584511 - 20584476
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||| ||||||||||||||||||||||||||||    
T  20584511 ctgtgtcaaaatcaaatgaaccaagtctctatttat 20584476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 36231305 - 36231340
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  36231305 ctgtgtccaaatcaaatgatccaagtctctatttat 36231340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 37690985 - 37690950
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  37690985 ctgtgtccaaatcaaatgatccaagtctctatttat 37690950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 45242433 - 45242468
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  45242433 ctgtgtccaaatcaaatgatccaagtctctatttat 45242468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 48927257 - 48927292
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||| ||||||||||    
T  48927257 ctgtgtccaaatcaaatgaaccaagcctctatttat 48927292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 51156374 - 51156339
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  51156374 ctgtgtccaaatcaaatgatccaagtctctatttat 51156339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 52930383 - 52930348
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||| |||||||||||||||||||||||||||||    
T  52930383 ctgtgttcaaatcaaatgaaccaagtctctatttat 52930348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Complemental strand, 643540 - 643506
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||| ||||||||||||||||    
T  643540 tgtgtccaaatcaaatgatccaagtctctatttat 643506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Complemental strand, 3754745 - 3754711
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||| |||||||||||    
T  3754745 tgtgtccaaatcaaatgaaccaattctctatttat 3754711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 8464826 - 8464884
Alignment:
Q  142 tgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttca 199  Q
    ||||| |||||||| |||||||| | ||||||||||||||||| || ||||||||||||    
T  8464826 tgggtcttgaaatggttattattgggatccatttcactaaaaaaaagattaaaacttca 8464884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Complemental strand, 17676033 - 17675999
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||| ||||||||||||||||    
T  17676033 tgtgtccaaatcaaatgatccaagtctctatttat 17675999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Original strand, 29524285 - 29524318
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  29524285 ctgtgtccaaatcaaatgatccaagtctctattt 29524318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 30878323 - 30878290
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  30878323 ctgtgtccaaatcaaatgatccaagtctctattt 30878290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 45242172 - 45242209
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatta 51  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  45242172 aggatgactggttgaaatttggtgaaaaaccaaaatta 45242209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Original strand, 45363862 - 45363895
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  45363862 ctgtgtccaaatcaaatgatccaagtctctattt 45363895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 300
Target Start/End: Original strand, 37822984 - 37823016
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    |||||||||||||||||| ||||||||||||||    
T  37822984 tgtgtccaaatcaaatgatccaagtctctattt 37823016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 5e-53; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 14 - 178
Target Start/End: Original strand, 27392608 - 27392773
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||| |||||||    
T  27392608 aggatgactggttgaaatttggtgtaaaaccaaaattaggtatgttttgaggacgttggttggaaaattgatttggattttgataattgttgggattttg 27392707  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcact 178  Q
    |||| |||||||||||||| || |||| |||||||||||||| ||||||||  |||||||||||||    
T  27392708 gtagttaaatgggtaattagaataattttgggtgttgaaatggttattattgggatccatttcact 27392773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 35101529 - 35101715
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    ||||||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||     
T  35101529 aggatgattggttgaaatttggtggaaaaccaaaattaggtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggattttc 35101628  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||||||||||| || |||| ||| |||||||||| ||||||||  |||||||||||||||||| || ||||||||||||    
T  35101629 gtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttca 35101715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 26748899 - 26748713
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||     
T  26748899 aggatgactggttgaaatttggtgcaaaaccaaaattaggtacgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggattttc 26748800  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
      || |||||||||||||| || || | |||||||||||||| ||||||||  ||||||| |||| ||||| || ||||||||||||    
T  26748799 aaagttaaatgggtaattagaaaaaatttgggtgttgaaatggttattattgggatccatgtcacaaaaaataagattaaaacttca 26748713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 199
Target Start/End: Complemental strand, 8449956 - 8449788
Alignment:
Q  32 ttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaatt 131  Q
    |||||| |||| |||||||| ||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| |||||| |||| |||||||||||||    
T  8449956 ttggtggaaaaccaaaattaggtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggattttcgtagttaaatgggtaatt 8449857  T
Q  132 aaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    | || |||| ||| |||||||||| ||||||||  |||||||||||||||||| || ||||||||||||    
T  8449856 agaataattttggttgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttca 8449788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 57 - 302
Target Start/End: Original strand, 15056760 - 15056999
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| |||||||||||||| ||| ||  | ||||||||||||| ||||||||||| |||| ||||||| | ||||||| ||||||||||| |||    
T  15056760 gttttgaggatgttggttggaaaattgatttgggtgttgataattgttgggattttggtagttaaaagggtaatcagaagaattttgggtgttgaattga 15056859  T
Q  157 ttatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaact 255  Q
    || ||| |  |||||||||||||||| | || | |||||||| |||||||||||| ||| ||||       ||||||||| ||||||| |||||||||||    
T  15056860 ttgttagtgggatccatttcactaaata-aagactaaaactttaaaagaaaagctaatacaaag------ctaataataagattaagagagtgaaaaact 15056952  T
Q  256 tcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    | |        |||||||||||||||||||  |||||||||||||||    
T  15056953 tgattttttttctgtgtccaaatcaaatgattcaagtctctatttat 15056999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 17744710 - 17744896
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    ||||||||| |||||||||||||| |||| |||||||| ||||||||||||||  ||||||| ||||| ||| || |||| ||||||||||| ||||||     
T  17744710 aggatgacttgttgaaatttggtgtaaaaccaaaattaggtatgttttgaggatattggttgaaaaattgatttggatttggataattgttgggattttc 17744809  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| ||||||  | |||| || |||| |||||||||||||| ||||||||  |||| |||||| ||||||  | ||||||||||||    
T  17744810 gtagttaaatgaattattagaataattttgggtgttgaaatggttattattgggatcaatttcaataaaaattagattaaaacttca 17744896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 36912745 - 36912886
Alignment:
Q  59 tttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgatt 158  Q
    ||||||||||||||||| |||||  || || |||| ||||||||||| |||||| |||| |||||||||||||| || |||| |||||||||||||| ||    
T  36912745 tttgaggacgttggttgaaaaattcatttggatttggataattgttgggattttcgtagttaaatgggtaattagaataattttgggtgttgaaatggtt 36912844  T
Q  159 attatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||||||  |||||||||||||||||| || ||||||||||||    
T  36912845 attattgggatccatttcactaaaaataagattaaaacttca 36912886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 51 - 199
Target Start/End: Original strand, 13817220 - 13817369
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||  ||| || |||| |||||| || |||| |||||||||    
T  13817220 atgtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggattttcatagttatatggataattagaaaaattttgggtgttg 13817319  T
Q  151 aaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  13817320 aaatggttattattgggatccatttcacaaaaaataagattaaaacttca 13817369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 13947649 - 13947798
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | ||||||||||||| |||||||||||||||||||||||| | ||||||| | ||||||||| |||    
T  13947649 gttttgaagatgttggttgggaaattgatttggttgttgataattgttgggattttggtagctaaatgggtaatcagaagaatttttggtgttgaattga 13947748  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  |||||||||||||||| | || | |||||||||||||||||    
T  13947749 ttattattgggatccatttcactaaaca-aagactaaaacttcaaaagaaa 13947798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 199
Target Start/End: Original strand, 5213966 - 5214115
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || |||| ||||||||||| |||||| |||| || ||||||||||||||   || |||||||||    
T  5213966 atgtatgttttgaggacgttggttataaaattgatttggatttggataattgttgggattttcgtagttatatgggtaattaaaatttttttgggtgttg 5214065  T
Q  151 aaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    | ||| ||||||||  |||| ||||||| ||||| || ||||||||||||    
T  5214066 agatggttattattgggatcgatttcacaaaaaataagattaaaacttca 5214115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 199
Target Start/End: Original strand, 5736200 - 5736347
Alignment:
Q  53 gtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaa 152  Q
    ||||||||||||||||||||||| ||||| ||| || |||  |||||||||||  ||||| |||| ||||||||||| || || |||| ||||  |||||    
T  5736200 gtatgttttgaggacgttggttgaaaaattgatttggattgggataattgttggaattttcgtagttaaatgggtaactagaataattttggggattgaa 5736299  T
Q  153 atgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||| || |||||  |||||||||||||||||| || ||||||||||||    
T  5736300 atggttgttattgggatccatttcactaaaaataagattaaaacttca 5736347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 43524133 - 43523983
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | ||||||||||||| ||||||||||| ||||||| |||| | ||||||| ||||||||||| |||    
T  43524133 gttttgaagatgttggttgggaaattgatttgggtgttgataattgttgggattttggtaggtaaatggataatcagaagaattttgggtgttgaattga 43524034  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaa 207  Q
    ||||||||  |||| ||||||||||| | || | ||||||||||||||||||    
T  43524033 ttattattgggatctatttcactaaaca-aacactaaaacttcaaaagaaaa 43523983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 13784074 - 13783925
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | ||||||||||||| |||||||||||||||||| ||||| | ||||||| | ||||||||| |||    
T  13784074 gttttgaagatgttggttgggaaattgatttgggtgttgataattgttgggattttggtagctaaatgagtaatcagaagaattttaggtgttgaattga 13783975  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  |||||||||||||||| | || | || ||||||||||||||    
T  13783974 ttattattgggatccatttcactaaaca-aaaactagaacttcaaaagaaa 13783925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 30529495 - 30529382
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatatta 191  Q
    ||||||||||||| ||||||||||||||||| |||||| | ||||||| ||||||||||| |||||||||||  ||||||||||||| || | || | ||    
T  30529495 ttgataattgttgggattttggtagctaaataggtaatcagaagaattttgggtgttgaattgattattattgggatccatttcacttaata-aagacta 30529397  T
Q  192 aaacttcaaaagaaa 206  Q
    |||||||||||||||    
T  30529396 aaacttcaaaagaaa 30529382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 38205077 - 38204964
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatatta 191  Q
    ||||||||||||| ||||||||||||||||||| |||| ||||||||| ||| || |||| |||||||||||  |||||||||||||||| | || | ||    
T  38205077 ttgataattgttgggattttggtagctaaatggataatcaaaagaattttggatggtgaattgattattattaggatccatttcactaaata-aagacta 38204979  T
Q  192 aaacttcaaaagaaa 206  Q
    |||||||||||||||    
T  38204978 aaacttcaaaagaaa 38204964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 1633301 - 1633152
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | ||||||||||||| ||||||| ||||||||||| |||| | ||||||| |||||||| || |||    
T  1633301 gttttgaagatgttggttgggaaattgatttgggtgttgataattgttgggattttgatagctaaatggataatcagaagaattttgggtgttaaattga 1633202  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||| ||  |||||||||||||||| | || | |||||||||||||||||    
T  1633201 ttattgttgggatccatttcactaaaca-aagactaaaacttcaaaagaaa 1633152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 302
Target Start/End: Original strand, 231589 - 231771
Alignment:
Q  115 tagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgat 213  Q
    ||||||||||| | |||| ||||||| | | ||||||||||||||||||  | || |||||||||||||||||  |||||||||||||| ||||||| ||    
T  231589 tagctaaatggttgattagaagaattctagatgttgaaatgattattatagggattcatttcactaaaaagaagtttaaaacttcaaaataaaagctaat 231688  T
Q  214 agaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||| ||      ||||||||| ||||||||||||||||  ||          |||||||||||| ||||||| |||||||||||||||    
T  231689 agaagga------taataataagattaagatagtgaaaattttggttttttttctgtgtccaaattaaatgaatcaagtctctatttat 231771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 302
Target Start/End: Original strand, 708000 - 708182
Alignment:
Q  115 tagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgat 213  Q
    ||||||||||| | |||| ||||||| | | ||||||||||||||||||  | || |||||||||||||||||  |||||||||||||| ||||||| ||    
T  708000 tagctaaatggttgattagaagaattctagatgttgaaatgattattatagggattcatttcactaaaaagaagtttaaaacttcaaaataaaagctaat 708099  T
Q  214 agaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||| ||      ||||||||| ||||||||||||||||  ||          |||||||||||| ||||||| |||||||||||||||    
T  708100 agaagga------taataataagattaagatagtgaaaattttggttttttttctgtgtccaaattaaatgaatcaagtctctatttat 708182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 302
Target Start/End: Original strand, 745212 - 745394
Alignment:
Q  115 tagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgat 213  Q
    ||||||||||| | |||| ||||||| | | ||||||||||||||||||  | || |||||||||||||||||  |||||||||||||| ||||||| ||    
T  745212 tagctaaatggttgattagaagaattctagatgttgaaatgattattatagggattcatttcactaaaaagaagtttaaaacttcaaaataaaagctaat 745311  T
Q  214 agaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||| ||      ||||||||| ||||||||||||||||  ||          |||||||||||| ||||||| |||||||||||||||    
T  745312 agaagga------taataataagattaagatagtgaaaattttggttttttttctgtgtccaaattaaatgaatcaagtctctatttat 745394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 302
Target Start/End: Original strand, 869107 - 869289
Alignment:
Q  115 tagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgat 213  Q
    ||||||||||| | |||| ||||||| | | ||||||||||||||||||  | || |||||||||||||||||  |||||||||||||| ||||||| ||    
T  869107 tagctaaatggttgattagaagaattctagatgttgaaatgattattatagggattcatttcactaaaaagaagtttaaaacttcaaaataaaagctaat 869206  T
Q  214 agaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||| ||      ||||||||| ||||||||||||||||  ||          |||||||||||| ||||||| |||||||||||||||    
T  869207 agaagga------taataataagattaagatagtgaaaattttggttttttttctgtgtccaaattaaatgaatcaagtctctatttat 869289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 302
Target Start/End: Complemental strand, 12272244 - 12272115
Alignment:
Q  166 gatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnn 265  Q
    |||||||||||||||| | || | |||||||| |||||||||||| ||||||||||      |||||||||||||||| ||||||||||||             
T  12272244 gatccatttcactaaata-aagactaaaactttaaaagaaaagctaatagaaagat------aataataatattaagagagtgaaaaacttggttttttt 12272152  T
Q  266 nctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
     ||||||||||||||||||| ||||||||||||||||    
T  12272151 tctgtgtccaaatcaaatgatccaagtctctatttat 12272115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 256
Target Start/End: Complemental strand, 17494409 - 17494307
Alignment:
Q  148 ttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatag 246  Q
    ||||||||||||||||| | || |||||||||||||||||  ||||||||||||||| |||||| |||||| ||      ||||||||| ||||||||||    
T  17494409 ttgaaatgattattattgggattcatttcactaaaaagaagtttaaaacttcaaaag-aaagctaatagaagga------taataataagattaagatag 17494317  T
Q  247 tgaaaaactt 256  Q
    ||||||||||    
T  17494316 tgaaaaactt 17494307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 43618063 - 43617981
Alignment:
Q  119 taaatgggtaattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaa 200  Q
    |||||||||||||| || |||| ||| |||||||||| |||||||| | ||||||||||||||||| || |||||||||||||    
T  43618063 taaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttcaa 43617981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 44503526 - 44503598
Alignment:
Q  134 aagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||| ||||||||||| |||||||||||  |||||||||||||||| | ||||||||||||||||||||||    
T  44503526 aagaattttgggtgttgaattgattattattgagatccatttcactaaaca-aatattaaaacttcaaaagaaa 44503598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 199
Target Start/End: Complemental strand, 34955197 - 34955087
Alignment:
Q  90 attttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaata 188  Q
    |||| ||||||||||| |||||| |||| ||||||||||| || || |||| || |  |||||||| || ||||| | ||||||||||||||||| || |    
T  34955197 atttggataattgttgggattttcgtagttaaatgggtaactagaataattttgaggattgaaatggttgttattgggatccatttcactaaaaataaca 34955098  T
Q  189 ttaaaacttca 199  Q
    |||||||||||    
T  34955097 ttaaaacttca 34955087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 4625216 - 4625181
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  4625216 ctgtgtccaaatcaaatgaaccaagtctctatttat 4625181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 5736403 - 5736438
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  5736403 ctgtgtccaaatcaaatgaaccaagtctctatttat 5736438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 8449725 - 8449690
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  8449725 ctgtgtccaaatcaaatgaaccaagtctctatttat 8449690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 18029035 - 18029000
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  18029035 ctgtgtccaaatcaaatgaaccaagtctctatttat 18029000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 26631844 - 26631809
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  26631844 ctgtgtccaaatcaaatgaaccaagtctctatttat 26631809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 26748650 - 26748615
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  26748650 ctgtgtccaaatcaaatgaaccaagtctctatttat 26748615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 30470510 - 30470475
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  30470510 ctgtgtccaaatcaaatgaaccaagtctctatttat 30470475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 30529617 - 30529546
Alignment:
Q  25 ttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttga 96  Q
    |||||||||| ||||||| |||||||| | |||||||||||| |||| ||||||||| ||| || |||||||    
T  30529617 ttgaaatttgatgcaaaaccaaaattaggcatgttttgaggatgttgattggaaaattgatttggattttga 30529546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 34955024 - 34954989
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  34955024 ctgtgtccaaatcaaatgaaccaagtctctatttat 34954989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 18029158 - 18029100
Alignment:
Q  142 tgggtgttgaaatgattattattt-gatccatttcactaaaaagaatattaaaacttca 199  Q
    |||||||||||||| ||||||||  |||||||||||||||||| || ||||||||||||    
T  18029158 tgggtgttgaaatggttattattgagatccatttcactaaaaataagattaaaacttca 18029100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 29731938 - 29732018
Alignment:
Q  126 gtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||| ||||||| |||||||| || |||||||||||  |||||||||||||||| | || | |||||||||||||||||    
T  29731938 gtaattagaagaattttgggtgttaaattgattattattgggatccatttcactaaaca-aagactaaaacttcaaaagaaa 29732018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 1954939 - 1954903
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttatt 303  Q
    ||||||||||||||||||| |||||||||||||||||    
T  1954939 ctgtgtccaaatcaaatgatccaagtctctatttatt 1954903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 1955084 - 1954985
Alignment:
Q  107 gattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaa 205  Q
    |||||||||||||||| ||||||| | ||||||| ||||||||| | ||||| ||| |  |||||||||||||||  | || | ||||||||||||||||    
T  1955084 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaatta-aagactaaaacttcaaaagaa 1954986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 26244877 - 26244964
Alignment:
Q  119 taaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    |||||| ||||| | ||||||| ||||||||||| |||||||||||  ||||||||| |||||| | || | |||||||||||||||||    
T  26244877 taaatgagtaatcagaagaattttgggtgttgaattgattattattgggatccattttactaaaca-aaaactaaaacttcaaaagaaa 26244964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 30289487 - 30289418
Alignment:
Q  231 aataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||| ||||||||    
T  30289487 aataatattaagatagtgaaaaactt--ggttttttctgtgtccaaatcaaatgaaccaagtcactatttat 30289418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 5214178 - 5214213
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  5214178 ctgtgtccaaatcaaatgatccaagtctctatttat 5214213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 13817432 - 13817467
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  13817432 ctgtgtccaaatcaaatgatccaagtctctatttat 13817467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 31129141 - 31129106
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  31129141 ctgtgtccaaatcaaatgatccaagtctctatttat 31129106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 35101777 - 35101812
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||| |||||||||||||||    
T  35101777 ctgtgtccaaatcaaatgaatcaagtctctatttat 35101812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 36912949 - 36912984
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||| |||||||||||||||||||||||    
T  36912949 ctgtgtccaaattaaatgaaccaagtctctatttat 36912984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 302
Target Start/End: Original strand, 41477506 - 41477614
Alignment:
Q  189 ttaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaactt-cannnnnnnnctgtgtccaaatcaaatgaac 287  Q
    |||||||||||||||||||| | |||||||||      ||||||||| ||||||||||| ||||||||  |        ||||||| ||||||||| |||    
T  41477506 ttaaaacttcaaaagaaaagttaatagaaaga------taataataagattaagatagtaaaaaacttggattttttttctgtgtctaaatcaaataaac 41477599  T
Q  288 caagtctctatttat 302  Q
    |||||||||||||||    
T  41477600 caagtctctatttat 41477614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 42860305 - 42860340
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  42860305 ctgtgtccaaatcaaatgatccaagtctctatttat 42860340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 42861078 - 42861113
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  42861078 ctgtgtccaaatcaaatgatccaagtctctatttat 42861113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 45100713 - 45100678
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  45100713 ctgtgtccaaatcaaatgatccaagtctctatttat 45100678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 298
Target Start/End: Complemental strand, 39810746 - 39810716
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctat 298  Q
    |||||||||||||||||||||||||||||||    
T  39810746 tgtgtccaaatcaaatgaaccaagtctctat 39810716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 5213917 - 5213954
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatta 51  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  5213917 aggatgactggttgaaatttggtggaaaaccaaaatta 5213954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 5736149 - 5736186
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatta 51  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  5736149 aggatgactggttgaaatttggtgtaaaaccaaaatta 5736186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 13783877 - 13783844
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  13783877 ctgtgtccaaatcaaatgatccaagtctctattt 13783844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 31129245 - 31129180
Alignment:
Q  142 tgggtgttgaaatgattattatttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagct 210  Q
    ||||||||||| ||||||||||  | |||||||||||||| | || | |||||||||||||||||||||    
T  31129245 tgggtgttgaattgattattat--ggtccatttcactaaata-aagactaaaacttcaaaagaaaagct 31129180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 3e-51; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 7827247 - 7827432
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||     
T  7827247 aggatgactggttgaaatttggtgtaaaaccaaaattaggtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggattttc 7827346  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||||||||||| || |||| |||||||||||||||||||||||  ||| |||||||||||||| || ||||||||||||    
T  7827347 gtagttaaatgggtaattagaataattttgggtgttgaaatgattattattgagat-catttcactaaaaataagattaaaacttca 7827432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 36609751 - 36609959
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    ||||||| || |||||||||||||||||| |||||||| || | |||||||||||| ||||| |||||  || ||||||||||||||||||| || ||||    
T  36609751 aggatgattgattgaaatttggtgcaaaaccaaaattaggtctattttgaggacgtaggttgaaaaattaatttgaattttgataattgttgggagtttg 36609850  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctga 212  Q
     ||||||||||| |||||| ||| ||| | |  ||||||| |||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| |    
T  36609851 atagctaaatggataattagaagtattctagacgttgaaaggattattattggaatccatttcactaaaaagaagattaaaacttcaaaagaaaagctaa 36609950  T
Q  213 tagaaagat 221  Q
    |||||||||    
T  36609951 tagaaagat 36609959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 25033320 - 25033506
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||     
T  25033320 aggatgactggttgaaatttggtgtaaaaccaaaattaggtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggattttc 25033419  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||||||||||| || | || |||||||||||||| ||||||||  |||||||||||||| ||| || ||||||||||||    
T  25033420 gtagttaaatgggtaattagaaaatttttgggtgttgaaatggttattattgggatccatttcactagaaataagattaaaacttca 25033506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 24 - 199
Target Start/End: Original strand, 21367730 - 21367906
Alignment:
Q  24 gttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaat 123  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| || |||  ||| |||||    
T  21367730 gttgaaatttggtgtaaaaccaaaattaggtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggaatttaatagttaaat 21367829  T
Q  124 gggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||||||||| || |||| |||||||||||||| ||||||||  |||||||||||||||||| || ||||||||||||    
T  21367830 gggtaattagaataattttgggtgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttca 21367906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 41152814 - 41152628
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    ||||||| |||||||||||||||| |||| ||||||||  ||||||||||| |||||||||| ||||| ||| || |||| |||||||||||  ||||      
T  41152814 aggatgattggttgaaatttggtgtaaaaccaaaattagatatgttttgagaacgttggttgaaaaattgatttggatttggataattgttggaatttcc 41152715  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||||||||||| || |||| | |||||||||||| ||||||||  |||||||||||||||||| |||||||||| ||||    
T  41152714 gtagttaaatgggtaattagaataattttaggtgttgaaatggttattattgagatccatttcactaaaaataatattaaaatttca 41152628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 31012030 - 31011832
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatt------------atgtatgttttgaggacgttggttggaaaatagatctgaattttgataatt 101  Q
    |||||||||||||||||||||||| |||| |||||||            ||||||||||||||||||||||||  ||||| ||| || |||| |||||||    
T  31012030 aggatgactggttgaaatttggtgaaaaaccaaaattaggtacgttttgatgtatgttttgaggacgttggttataaaattgatttggatttggataatt 31011931  T
Q  102 gttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||| |||| || ||||||||||| || |||| |||||||||||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  31011930 gttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccatttcacaaaaaataagattaaaacttca 31011832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 51 - 199
Target Start/End: Original strand, 4580178 - 4580327
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || |||| ||||||||||| |||||| |||| || ||||||||||| || | || |||||||||    
T  4580178 atgtatgttttgaggacgttggttataaaattgatttggatttggataattgttgggattttcgtagttatatgggtaattagaaaatttttgggtgttg 4580277  T
Q  151 aaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  4580278 aaatggttattattgggatccatttcacaaaaaataagattaaaacttca 4580327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 25670655 - 25670542
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatatta 191  Q
    ||||||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||| |||||||||||  |||||||||||||||| | || | ||    
T  25670655 ttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgattattattgggatccatttcactaaaca-aagacta 25670557  T
Q  192 aaacttcaaaagaaa 206  Q
    |||||||||||||||    
T  25670556 aaacttcaaaagaaa 25670542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 94 - 210
Target Start/End: Complemental strand, 27406032 - 27405916
Alignment:
Q  94 tgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaa 192  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||| ||||| |||||  |||||||||||||||| | || | |||    
T  27406032 tgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgattgttattgggatccatttcactaaata-aagactaa 27405934  T
Q  193 aacttcaaaagaaaagct 210  Q
    ||||||||||||||||||    
T  27405933 aacttcaaaagaaaagct 27405916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 30644897 - 30644765
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatatta 191  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||| ||||||||||| |||||  ||||  |||||||||| ||||| || | | ||    
T  30644897 ttgataattgttggaattttggtagctaaatgggtaattagaagaattttgggtgttgaattgattggtattgggatccatttccctaaatag-agacta 30644799  T
Q  192 aaacttcaaaagaaaagctgatagaaagataata 225  Q
    ||||||||||||||||||| |||||||| |||||    
T  30644798 aaacttcaaaagaaaagctaatagaaagctaata 30644765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 51 - 302
Target Start/End: Complemental strand, 31011981 - 31011734
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || |||| ||||||||||| |||||| |||| || ||||||||||| || |||| |||||||||    
T  31011981 atgtatgttttgaggacgttggttataaaattgatttggatttggataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttg 31011882  T
Q  151 aaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtga 249  Q
    ||||| |||||||| | ||||||||||| ||||| || ||||||||||||        ||| ||||||||||||||      |||| || ||||||||||    
T  31011881 aaatggttattattgggatccatttcacaaaaaataagattaaaacttcacttagtttgctaatagaaagataata------ataagatgaagatagtga 31011788  T
Q  250 aaaacttcannnnnnnn-ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||| ||           ||||||||||||||||||| ||||||||||||||||    
T  31011787 aaaatttggtttttttttctgtgtccaaatcaaatgatccaagtctctatttat 31011734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 32363306 - 32363193
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatatta 191  Q
    ||||||||||||| |||||||||||||||||||||||| | ||||||| | ||||||||| |||||||||||  |||||||||||||||| | || | ||    
T  32363306 ttgataattgttgggattttggtagctaaatgggtaatcagaagaattttaggtgttgaattgattattattgggatccatttcactaaaca-aagacta 32363208  T
Q  192 aaacttcaaaagaaa 206  Q
    |||||||||||||||    
T  32363207 aaacttcaaaagaaa 32363193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 225
Target Start/End: Complemental strand, 29616384 - 29616217
Alignment:
Q  58 ttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgat 157  Q
    ||||||||| ||||||||| |||| ||| ||  | ||||||||||||| ||||||||||||||||  |||| | | ||||||| ||||||||||| ||||    
T  29616384 ttttgaggatgttggttgggaaattgatttgggtgttgataattgttgggattttggtagctaaaatggtagtcagaagaattttgggtgttgaattgat 29616285  T
Q  158 tatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    | ||| |  |||||||||||||||| | || | ||||||||||||||||| ||| ||| |||| |||||    
T  29616284 tgttagtgggatccatttcactaaata-aacactaaaacttcaaaagaaaggctaatacaaagctaata 29616217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 177400 - 177499
Alignment:
Q  127 taattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    |||||| ||||||||||||||||||||| ||||||||| | |||||||| || |||||||| ||||||||||||||| |||||   ||||||||||||||    
T  177400 taattagaagaattatgggtgttgaaattattattattgggatccattttaccaaaaagaagattaaaacttcaaaataaaagtaaatagaaagataata 177499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 34529192 - 34529069
Alignment:
Q  172 tttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnnnctgtg 271  Q
    |||||||||||| || ||||||||||||||||||||||| ||||||||||      ||||| || |||||||||||||||||||| |         ||||    
T  34529192 tttcactaaaaa-aagattaaaacttcaaaagaaaagctaatagaaagat------aataacaagattaagatagtgaaaaacttgattttttttttgtg 34529100  T
Q  272 tccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||||||||||    
T  34529099 tccaaatcaaatgaaccaagtctctatttat 34529069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 42804633 - 42804516
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattatta-tttgatccatttcactaaaaagaatatta 191  Q
    ||||||||||||| ||||||||||| |||| ||||||| | ||||||| ||||||||||| ||||| ||| |  |||||||||||||||| | || | ||    
T  42804633 ttgataattgttgggattttggtagttaaaagggtaatcagaagaattttgggtgttgaattgattgttagtgagatccatttcactaaata-aagacta 42804535  T
Q  192 aaacttcaaaagaaaagct 210  Q
    |||||||||||||||||||    
T  42804534 aaacttcaaaagaaaagct 42804516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 15972845 - 15972944
Alignment:
Q  127 taattaaaagaattatgggtgttgaaatgattattatttga-tccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    |||||| ||||||| | |||||||||||||||||||||  | |||||||||||||||||||  ||||||||||||||||||| || ||| || |||||||    
T  15972845 taattagaagaattctaggtgttgaaatgattattattgaaatccatttcactaaaaagaagtttaaaacttcaaaagaaaatctaataaaaggataata 15972944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 13479443 - 13479334
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatatta 191  Q
    ||||||||||| | | |||||||||||||||| ||||| | ||||||| ||||||||||| |||||||||||  ||||||||| |||||| | || | ||    
T  13479443 ttgataattgtaggggttttggtagctaaatgagtaatcagaagaattttgggtgttgaattgattattattgggatccattttactaaaca-aagacta 13479345  T
Q  192 aaacttcaaaa 202  Q
    |||||||||||    
T  13479344 aaacttcaaaa 13479334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 34918149 - 34918085
Alignment:
Q  170 catttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataata 234  Q
    ||||||||| ||||||| ||||||||||||||||||||  | |||||||||||||| ||||||||    
T  34918149 catttcactgaaaagaagattaaaacttcaaaagaaaaattaatagaaagataataataataata 34918085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 14279216 - 14279251
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  14279216 ctgtgtccaaatcaaatgaaccaagtctctatttat 14279251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 25033569 - 25033604
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  25033569 ctgtgtccaaatcaaatgaaccaagtctctatttat 25033604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 25653205 - 25653240
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  25653205 ctgtgtccaaatcaaatgaaccaagtctctatttat 25653240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 41152566 - 41152531
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  41152566 ctgtgtccaaatcaaatgaaccaagtctctatttat 41152531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 4219224 - 4219152
Alignment:
Q  134 aagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||| ||||||||||| |||||||||||  |||||||||||||||| | || | |||||||||||||||||    
T  4219224 aagaattttgggtgttgaattgattattattgggatccatttcactaaaca-aagactaaaacttcaaaagaaa 4219152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 8681094 - 8681041
Alignment:
Q  172 tttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    ||||||| |||| || ||||||||||||||||||||| | ||||||||||||||    
T  8681094 tttcactcaaaaaaagattaaaacttcaaaagaaaagttaatagaaagataata 8681041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 302
Target Start/End: Complemental strand, 31008163 - 31008057
Alignment:
Q  190 taaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaacca 289  Q
    ||||||||||||||||||||| ||| |||| |||||      || | ||||||| |||||||||||| |        ||||||||||||||||||| |||    
T  31008163 taaaacttcaaaagaaaagctaatataaagctaata------atgagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatcca 31008070  T
Q  290 agtctctatttat 302  Q
    |||||||||||||    
T  31008069 agtctctatttat 31008057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 39008772 - 39008844
Alignment:
Q  134 aagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||| ||||||||||| |||||||||||  |||||||||||||||| | || | |||||||||||||||||    
T  39008772 aagaattttgggtgttgaattgattattattgggatccatttcactaaaca-aagactaaaacttcaaaagaaa 39008844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 302
Target Start/End: Original strand, 7827497 - 7827529
Alignment:
Q  270 tgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||||||||||||    
T  7827497 tgtccaaatcaaatgaaccaagtctctatttat 7827529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 27945859 - 27945958
Alignment:
Q  107 gattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaa 205  Q
    |||||||||||||||| ||||||| | ||||||| ||||||||| | ||||| ||| |  |||||||||||||||  | || | ||||||||||||||||    
T  27945859 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaatta-aagactaaaacttcaaaagaa 27945957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 32973221 - 32973122
Alignment:
Q  107 gattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaa 205  Q
    |||||||||||||||| ||||||| | ||||||| ||||||||| | ||||| ||| |  |||||||||||||||  | || | ||||||||||||||||    
T  32973221 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaatta-aagactaaaacttcaaaagaa 32973123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 39238794 - 39238881
Alignment:
Q  119 taaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    |||||| ||||| | ||||||| ||||||||||| |||||||||||  ||||||||| |||||| | || | |||||||||||||||||    
T  39238794 taaatgagtaatcagaagaattttgggtgttgaattgattattattgggatccattttactaaaca-aaaactaaaacttcaaaagaaa 39238881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 4580390 - 4580425
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4580390 ctgtgtccaaatcaaatgatccaagtctctatttat 4580425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 8176059 - 8176024
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||| |||||||||||||||||||||||    
T  8176059 ctgtgtccaaattaaatgaaccaagtctctatttat 8176024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 12913232 - 12913267
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||||||| |||||||    
T  12913232 ctgtgtccaaatcaaatgaaccaagtctttatttat 12913267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 13592604 - 13592569
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  13592604 ctgtgtccaaatcaaatgatccaagtctctatttat 13592569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 21368635 - 21368670
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||||| |||||||||    
T  21368635 ctgtgtccaaatcaaatgaaccaagtttctatttat 21368670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 27946002 - 27946037
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27946002 ctgtgtccaaatcaaatgatccaagtctctatttat 27946037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 32973077 - 32973042
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  32973077 ctgtgtccaaatcaaatgatccaagtctctatttat 32973042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 40892173 - 40892208
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  40892173 ctgtgtccaaatcaaatgatccaagtctctatttat 40892208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Original strand, 3455210 - 3455244
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||| ||||||||||||||||    
T  3455210 tgtgtccaaatcaaatgatccaagtctctatttat 3455244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Original strand, 15972968 - 15973002
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| |||||||||||||||    
T  15972968 tgtgtccaaatcaaatgaatcaagtctctatttat 15973002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Complemental strand, 36572090 - 36572056
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||| ||||||||||||||||    
T  36572090 tgtgtccaaatcaaatgatccaagtctctatttat 36572056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Complemental strand, 37882167 - 37882133
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||| ||||||||||||||||||    
T  37882167 tgtgtccaaatcaaattaaccaagtctctatttat 37882133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 41263691 - 41263749
Alignment:
Q  142 tgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttca 199  Q
    |||||||||||||| |||||||| | |||||||| |||||||| || ||||||||||||    
T  41263691 tgggtgttgaaatggttattattgggatccatttaactaaaaataagattaaaacttca 41263749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 4219107 - 4219074
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  4219107 ctgtgtccaaatcaaatgatccaagtctctattt 4219074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 4580129 - 4580166
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatta 51  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  4580129 aggatgactggttgaaatttggtgaaaaaccaaaatta 4580166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 23089798 - 23089870
Alignment:
Q  134 aagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||| ||||||||||| |||||||||||  ||||||||||| |||| | || | |||||||||||||||||    
T  23089798 aagaattttgggtgttgaattgattattattgggatccatttcaataaaca-aagactaaaacttcaaaagaaa 23089870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 27407552 - 27407500
Alignment:
Q  172 tttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    |||||||||||| || ||||||||||||||||||||| |  |||||||||||||    
T  27407552 tttcactaaaaa-aagattaaaacttcaaaagaaaagttattagaaagataata 27407500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 32363147 - 32363114
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  32363147 ctgtgtccaaatcaaatgatccaagtctctattt 32363114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 302
Target Start/End: Original strand, 19241692 - 19241724
Alignment:
Q  270 tgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||| ||||||||||||||||    
T  19241692 tgtccaaatcaaatgatccaagtctctatttat 19241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 40892029 - 40892128
Alignment:
Q  107 gattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaa 205  Q
    ||||||||||| |||| ||||||| | ||||||| ||||||||| | ||||| ||| |  |||||||||||||||  | || | ||||||||||||||||    
T  40892029 gattttggtagttaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaatta-aagactaaaacttcaaaagaa 40892127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 3e-51; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 46914478 - 46914292
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||     
T  46914478 aggatgactggttgaaatttggtggaaaaccaaaattaggtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggattttc 46914379  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||||||||||| || |||| ||| |||||||||| ||||||||  |||||||||||||||||| || ||||||||||||    
T  46914378 gtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttca 46914292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 14 - 200
Target Start/End: Complemental strand, 2212284 - 2212097
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    ||||||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||     
T  2212284 aggatgattggttgaaatttggtggaaaaccaaaattaggtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggattttc 2212185  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaa 200  Q
    |||| |||||||||||||| || |||| ||| |||||||||| ||||||||  |||||||||||||||||| || |||||||||||||    
T  2212184 gtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttcaa 2212097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 36658574 - 36658760
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    |||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||| ||||| ||| || |||| ||||||||||  ||||||     
T  36658574 aggatgactggttgaaatttggtgtaaaaccaaaattagttatgttttgaggacgttggttgaaaaattgatttggatttggataattgtttggattttc 36658673  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||| ||||||| || |||| |||||||||||||| ||||||||  |||||||||||||||||| || ||||||||||||    
T  36658674 gtagttaaatgagtaattagaataattttgggtgttgaaatggttattattgcgatccatttcactaaaaataagattaaaacttca 36658760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 199
Target Start/End: Complemental strand, 21654754 - 21654605
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| |||||| |||| || ||||||||||| || | || |||||||||    
T  21654754 atgtatgttttgaggacgttggttgaaaaattgatttggatttagataattgttgggattttcgtagttatatgggtaattagaaaatttttgggtgttg 21654655  T
Q  151 aaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  21654654 aaatggttattattgggatccatttcacaaaaaataagattaaaacttca 21654605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 53181432 - 53181234
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatt------------atgtatgttttgaggacgttggttggaaaatagatctgaattttgataatt 101  Q
    |||||||||||||||||||||||| |||| |||||||            ||||||||||||||||||||||||  ||||| ||| || |||| |||||||    
T  53181432 aggatgactggttgaaatttggtgaaaaaccaaaattaggtacgttttgatgtatgttttgaggacgttggttataaaattgatttggatttggataatt 53181333  T
Q  102 gttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||| |||| || ||||||||||| || |||| |||||||||||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  53181332 gttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccatttcacaaaaaataagattaaaacttca 53181234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 57 - 302
Target Start/End: Original strand, 13113710 - 13113948
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||| |||| ||| ||| | ||||||||||||| ||||||||||||||||  |||||| | ||||||| ||||||||||| |||    
T  13113710 gttttgaggatgttggttgggaaattgatttgagtgttgataattgttgggattttggtagctaaaatggtaatcataagaattttgggtgttgaattga 13113809  T
Q  157 ttatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaact 255  Q
    || ||| |  |||||||||||||||| | || | |||||||||||||||||  || ||| ||||       ||||||||||||||||| ||||||| |||    
T  13113810 ttgttagtgggatccatttcactaaata-aacactaaaacttcaaaagaaagactaatacaaag------ctaataataatattaagagagtgaaatact 13113902  T
Q  256 tcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    | |        ||||||||||||||||||| ||||||||||||||||    
T  13113903 tga-tttttttctgtgtccaaatcaaatgatccaagtctctatttat 13113948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 57 - 225
Target Start/End: Complemental strand, 23539565 - 23539397
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||  |||| ||| ||  | ||||||||||||| ||||||||||| |||||||||||| | ||||||| ||||||||||| |||    
T  23539565 gttttgaggatgttggttgtgaaattgatttgggtgttgataattgttgggattttggtagttaaatgggtaataagaagaattttgggtgttgaattga 23539466  T
Q  157 ttatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    || ||| |  |||||||||||||||| | || | ||||||||||||||||||||| |||||||| |||||    
T  23539465 ttgttactgggatccatttcactaaata-aagactaaaacttcaaaagaaaagctaatagaaagctaata 23539397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 57 - 225
Target Start/End: Original strand, 28901133 - 28901300
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||| |||| ||| ||  | ||||||||||||  |||||||||||||||||||||||| | ||||||| ||||||||||| |||    
T  28901133 gttttgaggatgttggttgggaaattgatttgggtgttgataattgtttggattttggtagctaaatgggtaatcataagaattttgggtgttgaattga 28901232  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    || |||||  |||||||||||||||| | || | |||||||||||||| |||||| |||||||| |||||    
T  28901233 ttgttattgggatccatttcactaaata-aagactaaaacttcaaaag-aaagctaatagaaagctaata 28901300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 127 - 302
Target Start/End: Complemental strand, 39048877 - 39048707
Alignment:
Q  127 taattaaaagaattatgggtgttgaaatgattattattt-gatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    |||||| ||||||| |||||||||||||||||||||||  |||||||||||||||||||||  ||||||||||||||||||| || ||| ||| |         
T  39048877 taattagaagaattctgggtgttgaaatgattattattgagatccatttcactaaaaagaagtttaaaacttcaaaagaaaatctaataaaaata----- 39048783  T
Q  226 gtaataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
     |||| |||| ||||||||||||||||||||          |||| |||||||||||||||||||||||||||||||    
T  39048782 -taatgataagattaagatagtgaaaaacttggttttttttctgtatccaaatcaaatgaaccaagtctctatttat 39048707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 57 - 302
Target Start/End: Original strand, 8994932 - 8995171
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||| |||| ||| ||  | ||||||||||||  ||||||||||||||||  |||||| | ||||||| ||||||||||| |||    
T  8994932 gttttgaggatgttggttgggaaattgatttgggtgttgataattgtttggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattga 8995031  T
Q  157 ttatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaact 255  Q
    || ||| |  |||||||||||||||| | || | ||||||||||||||||| ||| ||| ||||       |||| |||| ||||||| |||||||||||    
T  8995032 ttgttagtgggatccatttcactaaata-aacactaaaacttcaaaagaaaggctaatacaaag------ctaatgataagattaagagagtgaaaaact 8995124  T
Q  256 tcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    | |        ||||||||||||||||||| ||||||||||||||||    
T  8995125 tgattttttttctgtgtccaaatcaaatgatccaagtctctatttat 8995171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 57 - 302
Target Start/End: Complemental strand, 34463432 - 34463193
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||| |||| ||| ||  | ||||||||||||| ||||||||||||||||  |||||| | || |||| ||||||||||| |||    
T  34463432 gttttgaggatgttggttgggaaattgatttgggtgttgataattgttgggattttggtagctaaaatggtaatcagaataattttgggtgttgaattga 34463333  T
Q  157 ttatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaact 255  Q
    || ||| |  |||||||||||||||| | || | ||||||||||||||||| ||| ||| ||||       ||||||||| ||||||| |||||||||||    
T  34463332 ttgttagtgggatccatttcactaaata-aacactaaaacttcaaaagaaaggctaatacaaag------ctaataataagattaagagagtgaaaaact 34463240  T
Q  256 tcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    | |        ||||||||||||||||| | ||||||||||||||||    
T  34463239 tgattttttttctgtgtccaaatcaaataatccaagtctctatttat 34463193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 302
Target Start/End: Original strand, 28901329 - 28901534
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatatta 191  Q
    ||||||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||| ||||| ||||| | ||| ||||||||||| | || | ||    
T  28901329 ttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgattgttattggaatcaatttcactaaata-aagacta 28901427  T
Q  192 aaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaactt--cannnnnnnnctgtgtccaaatcaaatgaacca 289  Q
    |||||||||||||||| || ||||||||       ||||||||| ||||||| ||||||||||||            ||||||||||||||||||| |||    
T  28901428 aaacttcaaaagaaaaactaatagaaag------ctaataataagattaagagagtgaaaaacttggttttttttttctgtgtccaaatcaaatgatcca 28901521  T
Q  290 agtctctatttat 302  Q
    |||||||||||||    
T  28901522 agtctctatttat 28901534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 33607231 - 33607344
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatatta 191  Q
    ||||||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||| |||||||||||  |||||||||||||||| | || | ||    
T  33607231 ttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgattattattgagatccatttcactaaaca-aagacta 33607329  T
Q  192 aaacttcaaaagaaa 206  Q
    |||||||||||||||    
T  33607330 aaacttcaaaagaaa 33607344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 16171778 - 16171629
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||| |||| ||| ||  | |||||||||||||  ||||||||||||||| ||||||| | ||||||| ||||||||||| |||    
T  16171778 gttttgaggatgttggttgggaaattgatttgggtgttgataattgttggtattttggtagctaaaagggtaatcagaagaattttgggtgttgaattga 16171679  T
Q  157 ttatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    || ||| |  |||||||||||||||| | |||| |||||||||||||||||    
T  16171678 ttgttagtgggatccatttcactaaata-aatactaaaacttcaaaagaaa 16171629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 58 - 207
Target Start/End: Complemental strand, 34434424 - 34434276
Alignment:
Q  58 ttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgat 157  Q
    |||||| || |||||||||||||| ||| ||  | |||||||||||||| |||| ||||||||||||| |||| | ||||||| ||||||||||| ||||    
T  34434424 ttttgaagatgttggttggaaaattgatttgtgtgttgataattgttgaaattt-ggtagctaaatggataatcagaagaattttgggtgttgaattgat 34434326  T
Q  158 tattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaa 207  Q
    |||||||  |||||||||||||||| | || | ||||||||||||||||||    
T  34434325 tattattgggatccatttcactaaata-aagactaaaacttcaaaagaaaa 34434276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 57 - 302
Target Start/End: Complemental strand, 3530152 - 3529912
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||| |||| ||| ||  | ||||||||||||  ||||||||||||||||  |||||| | ||||||| ||||||||||| |||    
T  3530152 gttttgaggatgttggttgggaaattgatttgggtgttgataattgtttggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattga 3530053  T
Q  157 ttatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaact 255  Q
    || ||| |  |||||||||||||||| | || | ||||||||||||||||| ||| ||| ||||       |||| |||| ||||||| |||||||||||    
T  3530052 ttgttagtgggatccatttcactaaata-aacactaaaacttcaaaagaaaggctaatacaaag------ctaatgataagattaagagagtgaaaaact 3529960  T
Q  256 tca-nnnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    | |         ||||||||||||||||||| ||||||||||||||||    
T  3529959 tgatttttttttctgtgtccaaatcaaatgatccaagtctctatttat 3529912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 13094047 - 13093898
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | ||||||||||| | |||||||||||||||||| ||||| ||||||||| ||||||||||| |||    
T  13094047 gttttgaagatgttggttgggaaattgatttggctgttgataattgtagggattttggtagctaaatgagtaatcaaaagaattttgggtgttgaattga 13093948  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  ||||||||| | |||| | || | |||||||||||||||||    
T  13093947 ttattattgggatccattttattaaaca-aagactaaaacttcaaaagaaa 13093898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 199
Target Start/End: Original strand, 19409690 - 19409800
Alignment:
Q  90 attttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaata 188  Q
    |||| ||||||||||| |||||| |||| |||||| ||||||| || |||| |||||||||||||| ||||||||  |||||||||||||||||| || |    
T  19409690 atttggataattgttgggattttcgtagttaaatgagtaattagaataattttgggtgttgaaatggttattattgggatccatttcactaaaaataaaa 19409789  T
Q  189 ttaaaacttca 199  Q
    |||||||||||    
T  19409790 ttaaaacttca 19409800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 27864092 - 27864241
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | ||||||||||| | |||||||||||||||||| ||||| | ||||||| ||||||||||| |||    
T  27864092 gttttgaagatgttggttgggaaattgatttggctgttgataattgtagggattttggtagctaaatgagtaatcagaagaattttgggtgttgaattga 27864191  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  ||||||||| |||||| | || | |||||||||||||||||    
T  27864192 ttattattgggatccattttactaaaca-aagactaaaacttcaaaagaaa 27864241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 28447459 - 28447548
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaa 181  Q
    ||||||||||||| | ||||||||||||||| |||||| | ||||||| ||||||||||| |||||||||||  ||||||||||||||||    
T  28447459 ttgataattgttggggttttggtagctaaattggtaatcagaagaattttgggtgttgaattgattattattgggatccatttcactaaa 28447548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 53347539 - 53347423
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt----tgatccatttcactaaaaagaata 188  Q
    ||||||||||||| ||||||||||| ||||||| |||| | ||||||| ||||||||||| |||||||||||     |||||||||||||||| | || |    
T  53347539 ttgataattgttgggattttggtagttaaatggataatcagaagaattttgggtgttgaattgattattattattgggatccatttcactaaata-aaga 53347441  T
Q  189 ttaaaacttcaaaagaaa 206  Q
     |||||||||||||||||    
T  53347440 ctaaaacttcaaaagaaa 53347423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 35809578 - 35809727
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | ||||||||||| | |||||||||||||||||| ||||| | || |||| ||||||||||| |||    
T  35809578 gttttgaagatgttggttgggaaattgatttggctgttgataattgtagggattttggtagctaaatgagtaatcagaaaaattttgggtgttgaattga 35809677  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  ||||||||| | |||| | || | |||||||||||||||||    
T  35809678 ttattattgggatccattttattaaaca-aagactaaaacttcaaaagaaa 35809727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 299
Target Start/End: Complemental strand, 34199116 - 34198915
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattatta-tttgatccatttcactaaaaagaatatta 191  Q
    ||||||||||||| ||||||||||||||||  |||||| | ||||||| ||||||||||| ||||| ||| |  |||||||||||||||| | |  | ||    
T  34199116 ttgataattgttgggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattgattgttagtgggatccatttcactaaata-agcacta 34199018  T
Q  192 aaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaacttca-nnnnnnnnctgtgtccaaatcaaatgaaccaa 290  Q
    ||||||||||||||| ||| ||| ||||       |||| |||| ||||||| |||||||||||| |         ||||||||||||||||||| ||||    
T  34199017 aaacttcaaaagaaaggctaatacaaag------ctaatgataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaa 34198924  T
Q  291 gtctctatt 299  Q
    |||||||||    
T  34198923 gtctctatt 34198915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 39532950 - 39532889
Alignment:
Q  170 catttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaata 231  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||||||||||||| |||||    
T  39532950 catttcactaaaaagaagattaaagcttcaaaagaaaagctaatagaaagataataataata 39532889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 302
Target Start/End: Original strand, 56054437 - 56054665
Alignment:
Q  58 ttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgat 157  Q
    ||||||||| ||||||||| |||| ||| ||  | || ||||||||||  |||||||||||||||||||||||     ||||| ||||||||||| ||||    
T  56054437 ttttgaggatgttggttgggaaattgatttgggtgttcataattgttggaattttggtagctaaatgggtaat-----gaattttgggtgttgaattgat 56054531  T
Q  158 tatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaactt 256  Q
    | ||| |  |||||||||||||||| | || | ||||||||||||||||||    ||||||||       ||||||||| ||||||| ||||||||||||    
T  56054532 tgttagtgggatccatttcactaaata-aaaactaaaacttcaaaagaaaa----atagaaag------ctaataataagattaagagagtgaaaaactt 56054620  T
Q  257 cannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
              ||||||||||||||||||| ||||||||||||||||    
T  56054621 -ggtttttttctgtgtccaaatcaaatgatccaagtctctatttat 56054665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 55 - 181
Target Start/End: Complemental strand, 33077755 - 33077628
Alignment:
Q  55 atgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaat 154  Q
    |||||||||||| ||||||||| |||| ||| ||  | ||||||||||||| |||||||||||||||| | ||||| | || || | | ||||||||| |    
T  33077755 atgttttgaggatgttggttgggaaattgatttgggtgttgataattgttgggattttggtagctaaaagtgtaatcagaaaaaattttggtgttgaatt 33077656  T
Q  155 gattatta-tttgatccatttcactaaa 181  Q
    |||| ||| | |||||||||||||||||    
T  33077655 gattgttagtgtgatccatttcactaaa 33077628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 55720 - 55666
Alignment:
Q  171 atttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    |||||||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  55720 atttcactaaaaagaagattaaaacttcaaaagaaaagttaatagaaagataata 55666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 199
Target Start/End: Complemental strand, 47749940 - 47749830
Alignment:
Q  90 attttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaata 188  Q
    |||| ||||||||||| |||||| |||| |||||||||||||| || | || |||||||||||||  ||||||||  ||||||||| || ||||| || |    
T  47749940 atttggataattgttgggattttcgtagttaaatgggtaattagaaaatttttgggtgttgaaatagttattattgggatccattttacaaaaaataaga 47749841  T
Q  189 ttaaaacttca 199  Q
    |||||||||||    
T  47749840 ttaaaacttca 47749830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 206
Target Start/End: Complemental strand, 18469225 - 18469089
Alignment:
Q  69 ttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tga 167  Q
    |||||||| |||| ||| ||| | |||||| |||||| ||||||| ||||||||| |||| | | ||||||| | ||||||||| |||||||||||  ||    
T  18469225 ttggttgggaaattgatttgagtgttgata-ttgttgggattttgatagctaaattggtattcagaagaatttttggtgttgaattgattattattcaga 18469127  T
Q  168 tccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    |||||||||||||| | || | |||||||| ||||||||    
T  18469126 tccatttcactaaaca-aagactaaaactttaaaagaaa 18469089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 27142044 - 27141963
Alignment:
Q  119 taaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||||||||||||| || |||| ||| |||||||||| ||||||||  |||||||||||||||||| || ||||||| ||||    
T  27142044 taaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataagattaaaatttca 27141963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 33523652 - 33523705
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggt 146  Q
    ||||||||||||| |||||||||||||||||||||||| | ||||||| |||||    
T  33523652 ttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggt 33523705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 39113562 - 39113510
Alignment:
Q  172 tttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    |||||||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  39113562 tttcactaaaaa-aagattaaaacttcaaaagaaaagctaatagaaagataata 39113510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 2212035 - 2212000
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  2212035 ctgtgtccaaatcaaatgaaccaagtctctatttat 2212000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 16021182 - 16021257
Alignment:
Q  227 taataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||| ||||||| |||||||||||| |        ||||||||||||||||||| ||||||||||||||||    
T  16021182 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttat 16021257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 38173882 - 38173957
Alignment:
Q  227 taataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||| ||||||| |||||||||||| |        ||||||||||||||||||| ||||||||||||||||    
T  38173882 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttat 38173957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 40596453 - 40596418
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  40596453 ctgtgtccaaatcaaatgaaccaagtctctatttat 40596418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 46914229 - 46914194
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  46914229 ctgtgtccaaatcaaatgaaccaagtctctatttat 46914194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 47749767 - 47749732
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  47749767 ctgtgtccaaatcaaatgaaccaagtctctatttat 47749732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 55408256 - 55408221
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  55408256 ctgtgtccaaatcaaatgaaccaagtctctatttat 55408221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 28901057 - 28901119
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttgg 76  Q
    ||||||| || ||||||||||  |||||| |||||||||| |||||||||||| |||||||||    
T  28901057 aggatgagtgattgaaatttgaggcaaaaccaaaattatgcatgttttgaggatgttggttgg 28901119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 33607086 - 33607148
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttgg 76  Q
    |||||||||| |||||||||| ||||||| |||||||| | |||||||||||| |||| ||||    
T  33607086 aggatgactgattgaaatttgatgcaaaaccaaaattaggaatgttttgaggatgttgattgg 33607148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 269 - 302
Target Start/End: Complemental strand, 55634 - 55601
Alignment:
Q  269 gtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||    
T  55634 gtgtccaaatcaaatgaaccaagtctctatttat 55601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 17329712 - 17329640
Alignment:
Q  134 aagaattatgggtgttgaaatgattattattt-gatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||||||||| | || | |||||||||||||||||    
T  17329712 aagaattttgggtgttgaattgattattatttggattcatttcactaaaca-aagactaaaacttcaaaagaaa 17329640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 3615082 - 3614983
Alignment:
Q  107 gattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaa 205  Q
    |||||||||||||||| ||||||| | ||||||| ||||||||| | ||||| ||| |  |||||||||||||||  | || | ||||||||||||||||    
T  3615082 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaatta-aagactaaaacttcaaaagaa 3614984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 300
Target Start/End: Original strand, 19409864 - 19409896
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    |||||||||||||||||||||||||||||||||    
T  19409864 tgtgtccaaatcaaatgaaccaagtctctattt 19409896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 48403724 - 48403637
Alignment:
Q  119 taaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    |||||||||||| | ||||||| ||| ||||||| |||||||||||  ||||||||| |||||| || | | |||||||||||||||||    
T  48403724 taaatgggtaatcagaagaattttggatgttgaattgattattattgggatccattttactaaacag-agactaaaacttcaaaagaaa 48403637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 3614938 - 3614903
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  3614938 ctgtgtccaaatcaaatgatccaagtctctatttat 3614903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 7401442 - 7401497
Alignment:
Q  145 gtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttca 199  Q
    ||||||||||| |||||||| | ||||||||||||||||| || ||||||||||||    
T  7401442 gtgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttca 7401497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 7401561 - 7401596
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||| ||||||    
T  7401561 ctgtgtccaaatcaaatgaaccaagtctcaatttat 7401596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 16171581 - 16171546
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16171581 ctgtgtccaaatcaaatgatccaagtctctatttat 16171546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 21047634 - 21047599
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||| |||||||||||    
T  21047634 ctgtgtccaaatcaaatgaaccaaatctctatttat 21047599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 21654541 - 21654506
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  21654541 ctgtgtccaaatcaaatgatccaagtctctatttat 21654506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 31336221 - 31336186
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  31336221 ctgtgtccaaatcaaatgatccaagtctctatttat 31336186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 34434523 - 34434452
Alignment:
Q  25 ttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttga 96  Q
    |||||||||| ||||||| ||||||||   |||||||||||| ||||||||| |||| ||| || |||||||    
T  34434523 ttgaaatttgatgcaaaaccaaaattaaacatgttttgaggatgttggttgggaaattgatttggattttga 34434452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 36658823 - 36658858
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||| |||||||||||    
T  36658823 ctgtgtccaaatcaaatgaaccaaatctctatttat 36658858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 48506284 - 48506249
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  48506284 ctgtgtccaaatcaaatgatccaagtctctatttat 48506249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 300
Target Start/End: Original strand, 10090138 - 10090168
Alignment:
Q  270 tgtccaaatcaaatgaaccaagtctctattt 300  Q
    |||||||||||||||||||||||||||||||    
T  10090138 tgtccaaatcaaatgaaccaagtctctattt 10090168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Original strand, 12159129 - 12159159
Alignment:
Q  272 tccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||||||||||    
T  12159129 tccaaatcaaatgaaccaagtctctatttat 12159159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 16171854 - 16171792
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttgg 76  Q
    ||||||| || ||||||||||  |||||| ||||||||  ||||||||||||| |||||||||    
T  16171854 aggatgagtgattgaaatttgaggcaaaaccaaaattagttatgttttgaggatgttggttgg 16171792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 23539674 - 23539612
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttgg 76  Q
    ||||||| || ||||||||||  |||||| |||||||| | |||||||||||| |||||||||    
T  23539674 aggatgagtgattgaaatttgaggcaaaaccaaaattaggcatgttttgaggatgttggttgg 23539612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 297
Target Start/End: Complemental strand, 27141900 - 27141870
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctcta 297  Q
    |||||||||||||||||||||||||||||||    
T  27141900 ctgtgtccaaatcaaatgaaccaagtctcta 27141870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Complemental strand, 31848491 - 31848457
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||| ||||||||||||||||    
T  31848491 tgtgtccaaatcaaatgatccaagtctctatttat 31848457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Original strand, 33527082 - 33527112
Alignment:
Q  272 tccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||||||||||    
T  33527082 tccaaatcaaatgaaccaagtctctatttat 33527112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Complemental strand, 39113469 - 39113435
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||| |||||||    
T  39113469 tgtgtccaaatcaaatgaaccaagtctatatttat 39113435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 23389661 - 23389628
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  23389661 ctgtgtccaaatcaaatgatccaagtctctattt 23389628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 53347377 - 53347344
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  53347377 ctgtgtccaaatcaaatgatccaagtctctattt 53347344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 18469043 - 18469011
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatt 299  Q
    ||||||||||||||||||| |||||||||||||    
T  18469043 ctgtgtccaaatcaaatgatccaagtctctatt 18469011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 19273164 - 19273251
Alignment:
Q  119 taaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    |||||| ||||| | ||||||| ||||||||||| |||||||||||  ||| ||||| |||||| | || | |||||||||||||||||    
T  19273164 taaatgagtaatcagaagaattttgggtgttgaattgattattattgggattcattttactaaaca-aaaactaaaacttcaaaagaaa 19273251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 39532866 - 39532834
Alignment:
Q  270 tgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||| |||||||||||    
T  39532866 tgtccaaatcaaatgaaccaaatctctatttat 39532834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 6657 - 6471
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    |||||||||||||||||||||||| |||| |||||||| |||||||||||||||| |||||| ||||| ||| ||||||||||||||||||   |||||     
T  6657 aggatgactggttgaaatttggtgtaaaaccaaaattaggtatgttttgaggacgctggttgaaaaattgatttgaattttgataattgtttgaattttc 6558  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||||||||||| || |||| | |||||||||||| ||||||||  |||||||||||||||||| || ||||||||||||    
T  6557 gtagttaaatgggtaattagaataatttttggtgttgaaatgtttattattgggatccatttcactaaaaataagattaaaacttca 6471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 6409 - 6374
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  6409 ctgtgtccaaatcaaatgaaccaagtctctatttat 6374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 7e-49; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 926789 - 926506
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    ||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||| ||| || |||| ||||||||||||||||||     
T  926789 aggatgactcgttgaaatttggtgtaaaaccaaaattaggtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgagattttc 926690  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctga 212  Q
    | || |||||| | ||||| || |||| |||||||||||||  ||||||||  ||| |||||||||||||| |||||||||||||||        ||| |    
T  926689 gcagttaaatgagaaattagaataattttgggtgttgaaattgttattattgagattcatttcactaaaaataatattaaaacttcacttagtttgctaa 926590  T
Q  213 tagaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||      ||||||||| ||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  926589 tagaaaga------taataataagattaagatagtgaaaaacttggttttttttctgtgtccaaatcaaatgaaccaagtctctatttat 926506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 2779088 - 2778902
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    |||||| ||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||| ||||| ||| |  |||| ||||||||||| ||||||     
T  2779088 aggatggctggttgaaatttggtgtaaaatcaaaattaggtatgttttgaagacgttggttgaaaaattgatttcgatttggataattgttgggattttc 2778989  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| ||||||| |||||| || |||| |||||||||||||||||||||||  |||||||||||||||||| || ||||||||||||    
T  2778988 gtagttaaatggataattagaataattttgggtgttgaaatgattattattgagatccatttcactaaaaataagattaaaacttca 2778902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 8855131 - 8855317
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    ||||||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||     
T  8855131 aggatgattggttgaaatttggtggaaaaccaaaattaggtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgggattttc 8855230  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||||||||||| || |||| ||| |||||||||| ||||||||  |||||||||||||||||| || ||||||||||||    
T  8855231 gtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttca 8855317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 31204952 - 31204766
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||| ||||| ||| || ||   ||||||||||| ||||||     
T  31204952 aggatgactggttgaaatttggtgtaaaaccaaaattatgtaagttttgaggacgttggttgaaaaattgatttggatgaggataattgttgggattttc 31204853  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||||||||||| || |||| | |||||||||||| ||||||||  |||||||||||||||||| || ||||||||||||    
T  31204852 gtagttaaatgggtaattagaataatttttggtgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttca 31204766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 36855346 - 36855160
Alignment:
Q  11 caaaggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagatt 110  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||| ||||||||||||||||||| ||||| ||  || |||| ||||||||||| ||||    
T  36855346 caaaggatgactggttgaaatttggtgtaaaaccaaaattaggtacgttttgaggacgttggttgaaaaattgaattggatttggataattgttgggatt 36855247  T
Q  111 ttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaact 196  Q
    || |||  |||||||||||||| || |||| |||||||||||||||||| ||||  |||||||||||||||||| || |||||||||    
T  36855246 ttcgtaattaaatgggtaattagaaaaattttgggtgttgaaatgattactattgggatccatttcactaaaaataagattaaaact 36855160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 39432699 - 39432513
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttg 113  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||     
T  39432699 aggatgactggttgaaatttggtgcaaaaccaaaattaggtatgttttgaggacgttggttgaaaaattgatttggatttggataattgttgcgattttc 39432600  T
Q  114 gtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||| ||||||||| || |||| |||||||||||||| ||||||||  ||||||||| || ||||  || ||||||||||||    
T  39432599 gtagttaaaggggtaattagaaaaattttgggtgttgaaatggttattattgggatccattttacaaaaagtaagattaaaacttca 39432513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 31185238 - 31185040
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgagg------------acgttggttggaaaatagatctgaattttgataatt 101  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||            |||||||||| ||||| ||| || |||| |||||||    
T  31185238 aggatgactggttgaaatttggtgtaaaaccaaaattatgtatgttttgaggtaagttttgaggacgttggttgaaaaattgatttggatttggataatt 31185139  T
Q  102 gttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| ||||||  ||| |||||||||||||| || |||| |||||||||||||| ||||||||  |||||||||||||||||| || ||||||||||||    
T  31185138 gttgggattttattagttaaatgggtaattagaataattttgggtgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttca 31185040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 6363577 - 6363741
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| || ||||||||||| ||| ||  | ||||||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||| |||    
T  6363577 gttttgaggatgtcggttggaaaattgatttgcgtgttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattga 6363676  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagat 221  Q
    ||||||||  ||||||||| |||||| | || | |||||||||||||||||| || ||| ||||||    
T  6363677 ttattattgggatccattttactaaata-aagactaaaacttcaaaagaaaatctaataaaaagat 6363741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 199
Target Start/End: Original strand, 12858060 - 12858209
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || |||| ||||||||||| |||||| |||| || ||||||||||| || |||| |||||||||    
T  12858060 atgtatgttttgaggacgttggttataaaattgatttggatttggataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttg 12858159  T
Q  151 aaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  12858160 aaatggttattattgggatccatttcacaaaaaataagattaaaacttca 12858209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 30819618 - 30819420
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatt------------atgtatgttttgaggacgttggttggaaaatagatctgaattttgataatt 101  Q
    |||||||||||||||||||||||| |||| |||||||            ||||||||||||||||||||||||  ||||| ||| || |||| |||||||    
T  30819618 aggatgactggttgaaatttggtgaaaaaccaaaattaggtacgttttgatgtatgttttgaggacgttggttataaaattgatttggatttggataatt 30819519  T
Q  102 gttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||| |||| || ||||||||||| || |||| |||||||||||||| ||||||||  |||||||||||| ||||| || ||||||||||||    
T  30819518 gttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccatttcacaaaaaataagattaaaacttca 30819420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 37245831 - 37245972
Alignment:
Q  59 tttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgatt 158  Q
    ||||||||||||||||| |||||  || || |||| ||||||||||| |||||| |||| |||||||||||||| || |||| |||||||||||||| ||    
T  37245831 tttgaggacgttggttgaaaaattcatttggatttggataattgttgggattttcgtagttaaatgggtaattagaataattttgggtgttgaaatggtt 37245930  T
Q  159 attatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    ||||||  |||||||||||||||||| || ||||||||||||    
T  37245931 attattgggatccatttcactaaaaataagattaaaacttca 37245972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 51 - 302
Target Start/End: Complemental strand, 30819569 - 30819322
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || |||| ||||||||||| |||||| |||| || ||||||||||| || |||| |||||||||    
T  30819569 atgtatgttttgaggacgttggttataaaattgatttggatttggataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttg 30819470  T
Q  151 aaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtga 249  Q
    ||||| |||||||| | ||||||||||| ||||| || ||||||||||||        ||| ||||||||||||||      |||| || ||||||||||    
T  30819469 aaatggttattattgggatccatttcacaaaaaataagattaaaacttcacttagtttgctaatagaaagataata------ataagatgaagatagtga 30819376  T
Q  250 aaaacttcannnnnnnn-ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||| |         ||||||||||||||||||| ||||||||||||||||    
T  30819375 aaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttat 30819322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 9072921 - 9072723
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatt------------atgtatgttttgaggacgttggttggaaaatagatctgaattttgataatt 101  Q
    |||||||||||||||||||||||| |||| |||||||            ||||||||||||||||||||||||  ||||| ||| || |||| |||||||    
T  9072921 aggatgactggttgaaatttggtgaaaaaccaaaattaggtacgttttgatgtatgttttgaggacgttggttataaaattgatttggatttggataatt 9072822  T
Q  102 gttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttca 199  Q
    |||| |||||| |||| || ||||||||||| || |||| |||||||||||||| ||||||||  |||||||||||| | ||| || ||||||||||||    
T  9072821 gttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccatttcacaacaaataagattaaaacttca 9072723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 57 - 302
Target Start/End: Complemental strand, 22349795 - 22349556
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    |||||||||| ||||||||| |||| ||| ||  | ||||||||||||  ||||||||||||||||  |||||| | ||||||| ||||||||||| |||    
T  22349795 gttttgaggatgttggttgggaaattgatttgggtgttgataattgtttggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattga 22349696  T
Q  157 ttatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaact 255  Q
    || ||| |  |||||||||||||||| | || | ||||||||||||||||| ||| ||| ||||       |||| |||| ||||||| |||||||||||    
T  22349695 ttgttagtgggatccatttcactaaata-aacactaaaacttcaaaagaaaggctaatacaaag------ctaatgataagattaagagagtgaaaaact 22349603  T
Q  256 tcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    | |        ||||||||||||||||||| ||||||||||||||||    
T  22349602 tgattttttttctgtgtccaaatcaaatgatccaagtctctatttat 22349556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 7763065 - 7762916
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | |||||||||||||| ||||||||||||||||||||||| | ||||||| ||||||||||| |||    
T  7763065 gttttgaagatgttggttgggaaattgatttgggtgttgataattgttgaaattttggtagctaaatgggtaatcagaagaattttgggtgttgaattga 7762966  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  |||||||||||| ||| | || | |||||||||||||||||    
T  7762965 ttattattgggatccatttcacgaaaca-aagactaaaacttcaaaagaaa 7762916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 210
Target Start/End: Complemental strand, 16218569 - 16218469
Alignment:
Q  111 ttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagc 209  Q
    |||||||| ||||||  ||||| |||||||||||||||||||| |||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||    
T  16218569 ttggtagcaaaatggaaaattagaagaattatgggtgttgaaaggattattattgggatccaattcactaaaaagaagattaaaacttcaaaagaaaagc 16218470  T
Q  210 t 210  Q
    |    
T  16218469 t 16218469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 202
Target Start/End: Complemental strand, 17929079 - 17928945
Alignment:
Q  68 gttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tg 166  Q
    ||||||||| |||| ||| ||  | ||||||||||||||||||||||||||||||||| |||| | ||||||| ||||||||||| |||||||||||  |    
T  17929079 gttggttgggaaattgatttgtgtgttgataattgttgagattttggtagctaaatggataatcagaagaattttgggtgttgaattgattattattggg 17928980  T
Q  167 atccatttcactaaaaagaatattaaaacttcaaaa 202  Q
    ||||||||||||||| | || | |||||||||||||    
T  17928979 atccatttcactaaaca-aagactaaaacttcaaaa 17928945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 5145260 - 5145111
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || |||||||||||||| ||| ||  | ||||||||||||  ||||||||||||||||| ||||||||||| |||| ||||||||||| |||    
T  5145260 gttttgaagatgttggttggaaaattgatttgggtgttgataattgtttggattttggtagctaaataggtaattaaaaaaattttgggtgttgaattga 5145161  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  |||| ||||||||||| | || | |||||| ||||||||||    
T  5145160 ttattattgagatctatttcactaaata-aagactaaaacatcaaaagaaa 5145111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 51 - 302
Target Start/End: Complemental strand, 9072872 - 9072625
Alignment:
Q  51 atgtatgttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttg 150  Q
    ||||||||||||||||||||||||  ||||| ||| || |||| ||||||||||| |||||| |||| || ||||||||||| || |||| |||||||||    
T  9072872 atgtatgttttgaggacgttggttataaaattgatttggatttggataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttg 9072773  T
Q  151 aaatgattattatttg-atccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtga 249  Q
    ||||| |||||||| | ||||||||||| | ||| || ||||||||||||        ||| ||||||||||||||      |||| || ||||||||||    
T  9072772 aaatggttattattgggatccatttcacaacaaataagattaaaacttcacttagtttgctaatagaaagataata------ataagatgaagatagtga 9072679  T
Q  250 aaaacttcannnnnnnn-ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||           ||||||||||||||||||| ||||||||||||||||    
T  9072678 aaaacttggtttttttttctgtgtccaaatcaaatgatccaagtctctatttat 9072625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 4279281 - 4279433
Alignment:
Q  58 ttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgat 157  Q
    ||||||| | ||||||||| |||| ||| ||  | |||||||| |||| |||||||||||||||||||||||| | || |||| ||||||||||| ||||    
T  4279281 ttttgagtatgttggttgggaaattgatttgggtgttgataatggttgggattttggtagctaaatgggtaatcagaataattttgggtgttgaattgat 4279380  T
Q  158 tattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaaagct 210  Q
    ||||||| ||| ||||||||||||| | ||   |||||||||||||||||||||    
T  4279381 tattattgtgagccatttcactaaata-aagtctaaaacttcaaaagaaaagct 4279433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 36209309 - 36209196
Alignment:
Q  93 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatatta 191  Q
    ||||||||||||| ||||| | ||||||||||| |||| | ||||||| ||||||||||| |||||||||||  |||||||||||||||| | || | ||    
T  36209309 ttgataattgttgggatttagttagctaaatggataatcagaagaattttgggtgttgaattgattattattgggatccatttcactaaaca-aagacta 36209211  T
Q  192 aaacttcaaaagaaa 206  Q
    |||||||||||||||    
T  36209210 aaacttcaaaagaaa 36209196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 158
Target Start/End: Original strand, 39490326 - 39490415
Alignment:
Q  69 ttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgatt 158  Q
    |||||||| |||| ||| ||| | ||||||||||||| |||||||||||||||||| ||||| | ||||||| ||||||||||| |||||    
T  39490326 ttggttgggaaattgatttgagtgttgataattgttgggattttggtagctaaatgagtaatcagaagaattttgggtgttgaattgatt 39490415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 9331463 - 9331409
Alignment:
Q  171 atttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    |||||||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  9331463 atttcactaaaaagaagattaaaacttcaaaagaaaagttaatagaaagataata 9331409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 4296486 - 4296405
Alignment:
Q  119 taaatgggtaattaaaagaattatgggtgttgaaatgattattatttg-atccatttcactaaaaagaatattaaaacttca 199  Q
    |||||||||||||| || |||| ||| |||||||||| |||||||| | ||||||||||||||||| || ||||||||||||    
T  4296486 taaatgggtaattagaataattttggttgttgaaatggttattattgggatccatttcactaaaaataagattaaaacttca 4296405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 43495055 - 43494990
Alignment:
Q  170 catttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataa 235  Q
    |||||||||||||| || |||||||||||||||||||| || |||||||||||||| ||| |||||    
T  43495055 catttcactaaaaaaaagattaaaacttcaaaagaaaacctaatagaaagataataataacaataa 43494990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 302
Target Start/End: Complemental strand, 1072846 - 1072716
Alignment:
Q  166 gatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnn 265  Q
    |||||||||||||||| | || | |||||||| |||||||||||| ||||||||||||||      |||| ||||||| |||||||||||| |           
T  1072846 gatccatttcactaaata-aagactaaaactttaaaagaaaagctaatagaaagataata------ataagattaagagagtgaaaaacttgattttttt 1072754  T
Q  266 n-ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
      ||||||||||||||||||| ||||||||||||||||    
T  1072753 ctctgtgtccaaatcaaatgatccaagtctctatttat 1072716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 4279204 - 4279286
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttga 96  Q
    ||||||| || |||||||||| ||||||| |||||||| | |||||||||||| ||||||||| |||| ||| || |||||||    
T  4279204 aggatgagtgattgaaatttgatgcaaaaccaaaattaggcatgttttgaggatgttggttgggaaattgatttggattttga 4279286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 1987525 - 1987560
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  1987525 ctgtgtccaaatcaaatgaaccaagtctctatttat 1987560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 4296342 - 4296307
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  4296342 ctgtgtccaaatcaaatgaaccaagtctctatttat 4296307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 8855380 - 8855415
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  8855380 ctgtgtccaaatcaaatgaaccaagtctctatttat 8855415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 14383312 - 14383387
Alignment:
Q  227 taataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||| ||||||| |||||||||||| |        ||||||||||||||||||| ||||||||||||||||    
T  14383312 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttat 14383387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 36855095 - 36855060
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  36855095 ctgtgtccaaatcaaatgaaccaagtctctatttat 36855060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 43494956 - 43494921
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  43494956 ctgtgtccaaatcaaatgaaccaagtctctatttat 43494921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 44280459 - 44280534
Alignment:
Q  227 taataataatattaagatagtgaaaaacttcannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||| ||||||| |||||||||||| |        ||||||||||||||||||| ||||||||||||||||    
T  44280459 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttat 44280534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 17486106 - 17486178
Alignment:
Q  134 aagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||| ||||||||||| |||||||||||  |||||||||||||||| | || | |||||||||||||||||    
T  17486106 aagaattttgggtgttgaattgattattattgggatccatttcactaaaca-aagactaaaacttcaaaagaaa 17486178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 28946441 - 28946486
Alignment:
Q  180 aaaagaatattaaaacttcaaaagaaaagctgatagaaagataata 225  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  28946441 aaaagaagattaaaacttcaaaacaaaagctaatagaaagataata 28946486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 7585367 - 7585268
Alignment:
Q  107 gattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaa 205  Q
    |||||||||||||||| ||||||| | ||||||| ||||||||| | ||||| ||| |  |||||||||||||||  | || | ||||||||||||||||    
T  7585367 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaatta-aagactaaaacttcaaaagaa 7585269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 31184974 - 31184942
Alignment:
Q  270 tgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||||||||||||    
T  31184974 tgtccaaatcaaatgaaccaagtctctatttat 31184942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 6332988 - 6332953
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||| |||||||||||    
T  6332988 ctgtgtccaaatcaaatgaaccaaatctctatttat 6332953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 7585223 - 7585188
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7585223 ctgtgtccaaatcaaatgatccaagtctctatttat 7585188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 9118207 - 9118242
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  9118207 ctgtgtccaaatcaaatgatccaagtctctatttat 9118242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 12858272 - 12858307
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12858272 ctgtgtccaaatcaaatgatccaagtctctatttat 12858307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 301
Target Start/End: Complemental strand, 31204700 - 31204669
Alignment:
Q  270 tgtccaaatcaaatgaaccaagtctctattta 301  Q
    ||||||||||||||||||||||||||||||||    
T  31204700 tgtccaaatcaaatgaaccaagtctctattta 31204669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 36527203 - 36527238
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  36527203 ctgtgtccaaatcaaatgatccaagtctctatttat 36527238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 37246035 - 37246070
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||| |||||||||||||||||||||||    
T  37246035 ctgtgtccaaattaaatgaaccaagtctctatttat 37246070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 43022075 - 43022110
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  43022075 ctgtgtccaaatcaaatgatccaagtctctatttat 43022110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Complemental strand, 39432450 - 39432416
Alignment:
Q  268 tgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||| ||||||||||||||||    
T  39432450 tgtgtccaaatcaaatgatccaagtctctatttat 39432416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 1308370 - 1308337
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  1308370 ctgtgtccaaatcaaatgatccaagtctctattt 1308337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 1308487 - 1308415
Alignment:
Q  134 aagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||| ||||||||||| |||||||||||  ||| |||||||||||| | || | |||||||||||||||||    
T  1308487 aagaattttgggtgttgaattgattattattgggatacatttcactaaaca-aagactaaaacttcaaaagaaa 1308415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 302
Target Start/End: Complemental strand, 2778834 - 2778801
Alignment:
Q  269 gtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||| ||||||||||||||||||    
T  2778834 gtgtccaaatcaaataaaccaagtctctatttat 2778801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 7762872 - 7762839
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  7762872 ctgtgtccaaatcaaatgatccaagtctctattt 7762839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 12858011 - 12858048
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaatta 51  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  12858011 aggatgactggttgaaatttggtgaaaaaccaaaatta 12858048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 17928894 - 17928861
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  17928894 ctgtgtccaaatcaaatgatccaagtctctattt 17928861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 5145059 - 5145027
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatt 299  Q
    ||||||||||||||||||| |||||||||||||    
T  5145059 ctgtgtccaaatcaaatgatccaagtctctatt 5145027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 6333059 - 6333020
Alignment:
Q  170 catttcactaaaaagaatattaaaacttcaaaagaaaagct 210  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  6333059 catttcactaaaaa-aagattaaaacttcaaaagaaaagct 6333020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905 (Bit Score: 67; Significance: 9e-30; HSPs: 3)
Name: scaffold1905
Description:

Target: scaffold1905; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 58 - 302
Target Start/End: Original strand, 107 - 345
Alignment:
Q  58 ttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgat 157  Q
    ||||||||| ||||||||| |||| ||| ||  | |||||||||||||  ||||||||||||||| ||||||| | ||||||| |||||||||| |||||    
T  107 ttttgaggatgttggttgggaaattgatttgggtgttgataattgttggaattttggtagctaaaagggtaatcagaagaattttgggtgttgatatgat 206  T
Q  158 tatta-tttgatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaactt 256  Q
    | ||| |  |||||||||||||||| | || | ||||||||||||||||||| | ||| ||||       ||||||||| ||||||| ||||||||||||    
T  207 tgttagtgggatccatttcactaaata-aagactaaaacttcaaaagaaaagttaatacaaag------ctaataataagattaagagagtgaaaaactt 299  T
Q  257 cannnnnnnnctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
     |        || |||||||||||||||| ||||||||||||||||    
T  300 gattttttttctttgtccaaatcaaatgatccaagtctctatttat 345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 1240 - 1168
Alignment:
Q  134 aagaattatgggtgttgaaatgattattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||| ||||||||||| |||||||||||  |||||||||||||||| | || | |||||||||||||||||    
T  1240 aagaattttgggtgttgaattgattattattgggatccatttcactaaaca-aagactaaaacttcaaaagaaa 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 1124 - 1091
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctattt 300  Q
    ||||||||||||||||||| ||||||||||||||    
T  1124 ctgtgtccaaatcaaatgatccaagtctctattt 1091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 110096 - 109947
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | |||||||||||||  |||||| |||||||||||||||| | ||||||| |||||||| || |||    
T  110096 gttttgaagatgttggttgggaaattgatttgggtgttgataattgttggaattttgatagctaaatgggtaatcagaagaattttgggtgttaaattga 109997  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||  |||||||||||||||| | || | |||||||||||||||||    
T  109996 ttattattgggatccatttcactaaaca-aagactaaaacttcaaaagaaa 109947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 110205 - 110123
Alignment:
Q  14 aggatgactggttgaaatttggtgcaaaatcaaaattatgtatgttttgaggacgttggttggaaaatagatctgaattttga 96  Q
    ||||||| || |||||||||| ||||||| |||||||| | |||||||||||| |||| |||| |||| ||| || |||||||    
T  110205 aggatgagtgattgaaatttgatgcaaaaccaaaattaggcatgttttgaggatgttgattgggaaattgatttggattttga 110123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 109907 - 109872
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    ||||||||||||||||||| ||||||||||||||||    
T  109907 ctgtgtccaaatcaaatgatccaagtctctatttat 109872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 57 - 205
Target Start/End: Original strand, 106022 - 106170
Alignment:
Q  57 gttttgaggacgttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatga 156  Q
    ||||||| || ||||||||| |||| ||| ||  | ||||||||||||| ||||||| |||| ||||||||||| | ||||||| |||||||| || |||    
T  106022 gttttgaagatgttggttgggaaattgatttgggtgttgataattgttgggattttgatagccaaatgggtaatcagaagaattttgggtgttaaattga 106121  T
Q  157 ttattatt-tgatccatttcactaaaaagaatattaaaacttcaaaagaa 205  Q
    ||||||||  |||||||||||||||| | || | ||||||||||||||||    
T  106122 ttattattgggatccatttcactaaaca-aagactaaaacttcaaaagaa 106170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 468 - 606
Alignment:
Q  68 gttggttggaaaatagatctgaattttgataattgttgagattttggtagctaaatgggtaattaaaagaattatgggtgttgaaatgattattatt-tg 166  Q
    ||||||||| |||| ||| ||  | ||||||||||||| |||||||||||||||| |  |||| | ||||||| ||||||||||| |||||||||||  |    
T  468 gttggttgggaaattgatttgggtgttgataattgttgggattttggtagctaaaagtataatgagaagaattttgggtgttgaattgattattattggg 567  T
Q  167 atccatttcactaaaaagaatattaaaacttcaaaagaaa 206  Q
    ||||||||||||||| | || | |||||||||||||||||    
T  568 atccatttcactaaaca-aagactaaaacttcaaaagaaa 606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 302
Target Start/End: Original strand, 124325 - 124455
Alignment:
Q  166 gatccatttcactaaaaagaatattaaaacttcaaaagaaaagctgatagaaagataatagtaataataatattaagatagtgaaaaacttcannnnnnn 265  Q
    |||||||||||||||||||||  |||||||||||||||||||| | |||||||||      ||||||||| ||||||||||| ||||||||             
T  124325 gatccatttcactaaaaagaagtttaaaacttcaaaagaaaagttaatagaaaga------taataataagattaagatagtaaaaaacttggatttttt 124418  T
Q  266 nctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
     | ||||||||||||||| ||||||||||||||||||    
T  124419 tcggtgtccaaatcaaataaaccaagtctctatttat 124455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1183 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1183
Description:

Target: scaffold1183; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 26 - 61
Alignment:
Q  267 ctgtgtccaaatcaaatgaaccaagtctctatttat 302  Q
    |||||||||||||||||||||||||| |||||||||    
T  26 ctgtgtccaaatcaaatgaaccaagtatctatttat 61  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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