View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9788_low_29 (Length: 246)
Name: NF9788_low_29
Description: NF9788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9788_low_29 |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 2 - 235
Target Start/End: Complemental strand, 45707076 - 45706843
Alignment:
| Q |
2 |
agggaggcaagtatttgtggcatatgtaaatataggatgttactatctaattggactcccacttggaattctcatgggatgggtttttaatactggtgtt |
101 |
Q |
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| T |
45707076 |
agggtggcaagtatttgtggcatatgtaaatataggatgttactatctaattggactcccacttggaattctcatgggatgggtttttaatactggtgtt |
45706977 |
T |
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| Q |
102 |
gaagtaagtatataattaattaccataaacttaattaatttttctaatgatcatttatttaatttatatgtatggtgacagggtatatggggtggaatga |
201 |
Q |
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| T |
45706976 |
gaagtaagtatataattaattaccataaacttaattaatttttctaatgatcatttatttaatttatatgtatggtgacagggtatatggggtggaatga |
45706877 |
T |
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| Q |
202 |
tatttggtggtacagcaatccaaacgttgatact |
235 |
Q |
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| T |
45706876 |
tatttggtggtacagcaatccaaacgttgatact |
45706843 |
T |
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