View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9788_low_37 (Length: 223)
Name: NF9788_low_37
Description: NF9788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9788_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 17 - 208
Target Start/End: Original strand, 29145866 - 29146058
Alignment:
| Q |
17 |
agagaaaattaactaaggtacataacataacaaaagctatagctagctaaaaactaaggtcacaaaacattgacaactatatatttt-ttcctccttggt |
115 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
29145866 |
agagaaaattaactaaggtacataacataataaaagctatagctagctaaaaactaaggtcacaaaacattgacaactatatatttttttcctccttggt |
29145965 |
T |
|
| Q |
116 |
acaatcaattagcactttcaacatgacgtataaacgcattttctaaatctggtgctttaaaaaactctcttacaacaccactacgttggtagt |
208 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
29145966 |
acaatcaattagcactttcaacatgacgtataaacacattttctaaatctggtgctttaaaaaactctcttacaacaccactactttggtagt |
29146058 |
T |
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