View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9788_low_4 (Length: 446)

Name: NF9788_low_4
Description: NF9788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9788_low_4
NF9788_low_4
[»] chr3 (47 HSPs)
chr3 (18-182)||(28807700-28807864)
chr3 (273-312)||(28807956-28807995)
chr3 (392-431)||(38442239-38442278)
chr3 (392-431)||(51831510-51831549)
chr3 (390-436)||(6291781-6291827)
chr3 (397-431)||(34519880-34519914)
chr3 (397-431)||(38640400-38640434)
chr3 (397-431)||(40816969-40817003)
chr3 (397-431)||(48629542-48629576)
chr3 (392-429)||(9768255-9768292)
chr3 (394-427)||(40718620-40718653)
chr3 (384-431)||(3526529-3526576)
chr3 (392-431)||(5154719-5154758)
chr3 (397-436)||(7014732-7014771)
chr3 (392-431)||(7014976-7015015)
chr3 (392-431)||(7731268-7731307)
chr3 (392-431)||(40810759-40810798)
chr3 (397-431)||(3526787-3526821)
chr3 (397-431)||(5047415-5047449)
chr3 (397-431)||(6019646-6019680)
chr3 (397-427)||(6290876-6290906)
chr3 (397-431)||(8763902-8763936)
chr3 (397-431)||(9268576-9268610)
chr3 (397-431)||(9268821-9268855)
chr3 (397-431)||(10265493-10265527)
chr3 (394-436)||(16871417-16871459)
chr3 (397-431)||(25484119-25484153)
chr3 (397-431)||(33312583-33312617)
chr3 (397-431)||(37585639-37585673)
chr3 (397-431)||(38440989-38441023)
chr3 (397-431)||(40004123-40004157)
chr3 (397-427)||(48628149-48628179)
chr3 (397-431)||(54014560-54014594)
chr3 (397-427)||(55119427-55119457)
chr3 (392-429)||(9773489-9773526)
chr3 (392-425)||(23043127-23043160)
chr3 (392-425)||(25024921-25024954)
chr3 (392-425)||(43674179-43674212)
chr3 (394-431)||(55120617-55120654)
chr3 (397-425)||(8128140-8128168)
chr3 (397-425)||(19271622-19271650)
chr3 (397-425)||(26996025-26996053)
chr3 (397-425)||(39825702-39825730)
chr3 (392-436)||(40003873-40003917)
chr3 (397-425)||(40717613-40717641)
chr3 (391-431)||(46828022-46828062)
chr3 (397-425)||(52866214-52866242)
[»] chr8 (51 HSPs)
chr8 (390-431)||(26254574-26254615)
chr8 (392-436)||(29579952-29579996)
chr8 (397-436)||(1552739-1552778)
chr8 (392-431)||(33330857-33330896)
chr8 (397-431)||(4100717-4100751)
chr8 (397-431)||(13199312-13199346)
chr8 (397-431)||(13200487-13200521)
chr8 (397-431)||(17713453-17713487)
chr8 (397-431)||(26253007-26253041)
chr8 (397-431)||(27418160-27418194)
chr8 (397-431)||(29579105-29579139)
chr8 (391-431)||(40628422-40628462)
chr8 (397-436)||(3260875-3260914)
chr8 (397-428)||(12317534-12317565)
chr8 (397-436)||(17159114-17159153)
chr8 (392-431)||(22981057-22981096)
chr8 (392-431)||(27417170-27417209)
chr8 (392-431)||(40785239-40785278)
chr8 (397-431)||(116620-116654)
chr8 (397-427)||(1553983-1554013)
chr8 (397-427)||(4099647-4099677)
chr8 (397-427)||(7504511-7504541)
chr8 (397-427)||(7505520-7505550)
chr8 (397-431)||(10761176-10761210)
chr8 (397-431)||(11967054-11967088)
chr8 (397-431)||(12318732-12318766)
chr8 (397-431)||(13198096-13198130)
chr8 (397-427)||(19391637-19391667)
chr8 (397-431)||(23589991-23590025)
chr8 (397-431)||(23810581-23810615)
chr8 (397-431)||(28004643-28004677)
chr8 (397-431)||(28061945-28061979)
chr8 (397-427)||(28889030-28889060)
chr8 (397-427)||(28890074-28890104)
chr8 (397-427)||(28907689-28907719)
chr8 (397-427)||(28908732-28908762)
chr8 (392-426)||(32901603-32901637)
chr8 (397-427)||(34663566-34663596)
chr8 (397-431)||(34820575-34820609)
chr8 (397-427)||(34821662-34821692)
chr8 (397-427)||(43722238-43722268)
chr8 (397-431)||(43723649-43723683)
chr8 (398-431)||(14152659-14152692)
chr8 (394-431)||(41509720-41509757)
chr8 (386-427)||(43897697-43897738)
chr8 (397-425)||(11966041-11966069)
chr8 (399-431)||(17750103-17750135)
chr8 (399-431)||(17759090-17759122)
chr8 (397-425)||(22980813-22980841)
chr8 (397-425)||(23352254-23352282)
chr8 (397-425)||(43681445-43681473)
[»] chr1 (42 HSPs)
chr1 (384-436)||(163348-163400)
chr1 (392-436)||(5613717-5613761)
chr1 (397-436)||(7611440-7611479)
chr1 (397-431)||(3787242-3787276)
chr1 (393-431)||(5613976-5614014)
chr1 (397-431)||(7610458-7610492)
chr1 (397-431)||(7702106-7702140)
chr1 (397-431)||(8264079-8264113)
chr1 (389-431)||(16279225-16279267)
chr1 (397-431)||(17201636-17201670)
chr1 (394-431)||(24169107-24169144)
chr1 (394-431)||(28362624-28362661)
chr1 (397-430)||(33465858-33465891)
chr1 (397-436)||(1613836-1613875)
chr1 (397-436)||(6953883-6953922)
chr1 (392-431)||(15734472-15734511)
chr1 (392-431)||(26743059-26743098)
chr1 (397-436)||(45323430-45323469)
chr1 (392-431)||(51237960-51237999)
chr1 (397-431)||(8262747-8262781)
chr1 (397-431)||(11586477-11586511)
chr1 (397-431)||(12887001-12887035)
chr1 (397-431)||(13146317-13146351)
chr1 (397-427)||(13769894-13769924)
chr1 (397-431)||(15234216-15234250)
chr1 (397-431)||(16280947-16280981)
chr1 (397-431)||(16290623-16290657)
chr1 (397-431)||(22374565-22374599)
chr1 (391-425)||(29525876-29525910)
chr1 (389-431)||(29641840-29641882)
chr1 (394-436)||(42127786-42127828)
chr1 (398-431)||(43064310-43064343)
chr1 (392-425)||(44345003-44345036)
chr1 (391-431)||(1340679-1340719)
chr1 (397-425)||(1819088-1819116)
chr1 (397-425)||(9631909-9631937)
chr1 (394-426)||(16291899-16291931)
chr1 (397-425)||(23284933-23284961)
chr1 (397-425)||(25395421-25395449)
chr1 (392-436)||(29525621-29525665)
chr1 (397-425)||(37216494-37216522)
chr1 (397-425)||(40633342-40633370)
[»] chr7 (55 HSPs)
chr7 (392-431)||(29105597-29105636)
chr7 (397-431)||(813666-813700)
chr7 (397-431)||(3223045-3223079)
chr7 (397-431)||(3333038-3333072)
chr7 (397-431)||(11684229-11684263)
chr7 (397-431)||(11685284-11685318)
chr7 (393-431)||(18318712-18318750)
chr7 (397-431)||(23050196-23050230)
chr7 (397-431)||(42042917-42042951)
chr7 (394-431)||(15984429-15984466)
chr7 (387-427)||(45824448-45824488)
chr7 (392-427)||(299367-299402)
chr7 (392-431)||(4098095-4098134)
chr7 (388-427)||(4698931-4698970)
chr7 (397-428)||(9556827-9556858)
chr7 (397-436)||(12179933-12179972)
chr7 (397-436)||(15093700-15093739)
chr7 (397-436)||(23774954-23774993)
chr7 (392-431)||(23775140-23775179)
chr7 (397-436)||(31079113-31079152)
chr7 (397-436)||(31079353-31079392)
chr7 (397-436)||(41745092-41745131)
chr7 (397-427)||(300426-300456)
chr7 (397-427)||(4650554-4650584)
chr7 (397-427)||(4651626-4651656)
chr7 (397-427)||(4700053-4700083)
chr7 (397-431)||(7881664-7881698)
chr7 (397-431)||(11666759-11666793)
chr7 (397-431)||(16274472-16274506)
chr7 (397-431)||(16986721-16986755)
chr7 (397-431)||(17358252-17358286)
chr7 (397-431)||(20033911-20033945)
chr7 (397-431)||(21907541-21907575)
chr7 (397-431)||(22947615-22947649)
chr7 (397-431)||(24919917-24919951)
chr7 (397-431)||(25728439-25728473)
chr7 (397-431)||(30165477-30165511)
chr7 (397-431)||(31298796-31298830)
chr7 (397-431)||(37079808-37079842)
chr7 (397-431)||(37101559-37101593)
chr7 (397-431)||(38651787-38651821)
chr7 (397-431)||(43989047-43989081)
chr7 (397-431)||(47668131-47668165)
chr7 (397-431)||(49100332-49100366)
chr7 (390-431)||(3224298-3224339)
chr7 (388-425)||(28311101-28311138)
chr7 (397-430)||(46483871-46483904)
chr7 (397-425)||(3216052-3216080)
chr7 (397-425)||(12180184-12180212)
chr7 (392-436)||(18449601-18449644)
chr7 (391-431)||(22323120-22323160)
chr7 (397-425)||(24438912-24438940)
chr7 (397-425)||(34348189-34348217)
chr7 (397-425)||(38415900-38415928)
chr7 (397-425)||(43741982-43742010)
[»] chr5 (35 HSPs)
chr5 (392-431)||(1950052-1950091)
chr5 (397-431)||(26394179-26394213)
chr5 (397-431)||(32637467-32637501)
chr5 (397-431)||(38031959-38031993)
chr5 (397-431)||(39987138-39987172)
chr5 (397-431)||(41825047-41825081)
chr5 (394-431)||(5105102-5105139)
chr5 (391-427)||(39987370-39987406)
chr5 (390-425)||(6802072-6802107)
chr5 (392-431)||(16867758-16867797)
chr5 (397-436)||(21262847-21262886)
chr5 (392-431)||(26006511-26006550)
chr5 (392-431)||(26524641-26524680)
chr5 (392-431)||(29989713-29989752)
chr5 (397-431)||(1948763-1948797)
chr5 (397-431)||(10542297-10542331)
chr5 (397-431)||(13003800-13003834)
chr5 (397-431)||(13006668-13006702)
chr5 (397-431)||(13078458-13078492)
chr5 (397-431)||(13078687-13078721)
chr5 (397-431)||(20884036-20884070)
chr5 (397-427)||(22563258-22563288)
chr5 (397-431)||(22833649-22833683)
chr5 (397-431)||(25354551-25354585)
chr5 (397-431)||(29690713-29690747)
chr5 (397-431)||(29989467-29989501)
chr5 (393-431)||(40616445-40616483)
chr5 (397-427)||(41826280-41826310)
chr5 (391-431)||(7885027-7885067)
chr5 (397-425)||(11762251-11762279)
chr5 (397-425)||(19635104-19635132)
chr5 (387-431)||(20960856-20960900)
chr5 (397-425)||(27829958-27829986)
chr5 (397-425)||(27830212-27830240)
chr5 (397-425)||(38678431-38678459)
[»] chr4 (36 HSPs)
chr4 (392-431)||(55483805-55483844)
chr4 (397-431)||(3849826-3849860)
chr4 (397-431)||(8652854-8652888)
chr4 (397-431)||(8664661-8664695)
chr4 (397-431)||(31067949-31067983)
chr4 (397-431)||(55482517-55482551)
chr4 (388-425)||(28755078-28755115)
chr4 (397-436)||(9663209-9663248)
chr4 (397-436)||(17138101-17138140)
chr4 (392-431)||(54553082-54553121)
chr4 (397-431)||(32643-32677)
chr4 (397-431)||(15323432-15323466)
chr4 (397-427)||(17138783-17138813)
chr4 (397-431)||(18638381-18638415)
chr4 (397-431)||(19675857-19675891)
chr4 (397-431)||(22624351-22624385)
chr4 (397-427)||(23943890-23943920)
chr4 (397-427)||(23944960-23944990)
chr4 (397-431)||(34442607-34442641)
chr4 (397-427)||(39702002-39702032)
chr4 (397-431)||(39702454-39702488)
chr4 (398-436)||(47465181-47465219)
chr4 (397-431)||(49236547-49236581)
chr4 (397-431)||(49625710-49625744)
chr4 (397-431)||(54442231-54442265)
chr4 (397-427)||(54554135-54554165)
chr4 (394-431)||(9150722-9150759)
chr4 (394-431)||(15977286-15977323)
chr4 (390-431)||(19495407-19495448)
chr4 (398-431)||(45617465-45617498)
chr4 (391-431)||(3238412-3238452)
chr4 (397-425)||(6457411-6457439)
chr4 (397-425)||(8401208-8401236)
chr4 (397-425)||(13168787-13168815)
chr4 (391-427)||(31068734-31068769)
chr4 (397-425)||(39534066-39534094)
[»] chr2 (45 HSPs)
chr2 (397-436)||(27199142-27199181)
chr2 (397-436)||(27854569-27854608)
chr2 (388-431)||(43440467-43440510)
chr2 (392-431)||(43441803-43441842)
chr2 (397-431)||(6317455-6317489)
chr2 (393-431)||(20891619-20891657)
chr2 (397-431)||(39163826-39163860)
chr2 (397-431)||(42631781-42631815)
chr2 (387-427)||(10245852-10245892)
chr2 (391-431)||(22265132-22265172)
chr2 (392-436)||(33010796-33010840)
chr2 (392-431)||(24388852-24388891)
chr2 (397-431)||(2077047-2077081)
chr2 (397-431)||(2077291-2077325)
chr2 (397-431)||(5157323-5157357)
chr2 (397-431)||(5513486-5513520)
chr2 (397-431)||(5529172-5529206)
chr2 (397-431)||(5863189-5863223)
chr2 (397-431)||(8224392-8224426)
chr2 (397-427)||(10246946-10246976)
chr2 (397-431)||(12883085-12883119)
chr2 (397-431)||(20101007-20101041)
chr2 (397-431)||(20911984-20912018)
chr2 (397-431)||(20962047-20962081)
chr2 (397-431)||(20962292-20962326)
chr2 (397-431)||(23081042-23081076)
chr2 (397-427)||(27197747-27197777)
chr2 (397-427)||(27853174-27853204)
chr2 (397-431)||(27926936-27926970)
chr2 (397-431)||(34829939-34829973)
chr2 (397-431)||(34886435-34886469)
chr2 (397-431)||(34963601-34963635)
chr2 (397-431)||(36202123-36202157)
chr2 (397-431)||(36528961-36528995)
chr2 (397-431)||(44353905-44353939)
chr2 (397-430)||(5513732-5513765)
chr2 (392-425)||(6748974-6749007)
chr2 (398-431)||(8972668-8972701)
chr2 (390-431)||(14274472-14274513)
chr2 (392-425)||(33216642-33216675)
chr2 (397-425)||(3328933-3328961)
chr2 (397-425)||(8224642-8224670)
chr2 (397-425)||(18386608-18386636)
chr2 (397-425)||(25301564-25301592)
chr2 (397-425)||(44354156-44354184)
[»] scaffold0580 (2 HSPs)
scaffold0580 (397-431)||(2186-2220)
scaffold0580 (397-431)||(9925-9959)
[»] chr6 (41 HSPs)
chr6 (397-431)||(11536737-11536771)
chr6 (397-431)||(11562247-11562281)
chr6 (397-431)||(16543291-16543325)
chr6 (397-431)||(16840300-16840334)
chr6 (397-431)||(21180403-21180437)
chr6 (397-431)||(22794092-22794126)
chr6 (397-431)||(26242528-26242562)
chr6 (392-436)||(15502525-15502569)
chr6 (397-436)||(4211593-4211632)
chr6 (392-431)||(9964351-9964390)
chr6 (392-431)||(17341837-17341876)
chr6 (388-431)||(27660368-27660411)
chr6 (397-436)||(28039137-28039176)
chr6 (392-431)||(28632015-28632054)
chr6 (400-431)||(30240571-30240602)
chr6 (388-431)||(32131877-32131920)
chr6 (397-431)||(2965820-2965854)
chr6 (397-431)||(4212698-4212732)
chr6 (397-431)||(4407871-4407905)
chr6 (397-431)||(6176695-6176729)
chr6 (397-431)||(6176940-6176974)
chr6 (397-431)||(10629829-10629863)
chr6 (397-431)||(13788044-13788078)
chr6 (397-431)||(13796663-13796697)
chr6 (397-431)||(14597341-14597375)
chr6 (397-431)||(15502776-15502810)
chr6 (397-431)||(16542570-16542604)
chr6 (397-431)||(18699247-18699281)
chr6 (397-431)||(19591548-19591582)
chr6 (397-431)||(21383970-21384004)
chr6 (397-431)||(22043526-22043560)
chr6 (397-427)||(22795236-22795266)
chr6 (397-427)||(26241279-26241309)
chr6 (397-431)||(32009515-32009549)
chr6 (392-425)||(7850497-7850530)
chr6 (397-426)||(9218474-9218503)
chr6 (398-431)||(10738761-10738794)
chr6 (392-425)||(27660629-27660662)
chr6 (392-428)||(18073225-18073261)
chr6 (397-425)||(22043769-22043797)
chr6 (397-425)||(28228605-28228633)
[»] scaffold0284 (1 HSPs)
scaffold0284 (394-431)||(3363-3400)
[»] scaffold0009 (3 HSPs)
scaffold0009 (394-431)||(24763-24800)
scaffold0009 (397-431)||(25013-25047)
scaffold0009 (394-422)||(24669-24697)
[»] scaffold0744 (2 HSPs)
scaffold0744 (394-425)||(1303-1334)
scaffold0744 (397-431)||(1519-1553)
[»] scaffold0023 (1 HSPs)
scaffold0023 (392-431)||(125563-125602)
[»] scaffold0420 (2 HSPs)
scaffold0420 (397-431)||(4493-4527)
scaffold0420 (397-425)||(4247-4275)
[»] scaffold0235 (1 HSPs)
scaffold0235 (397-431)||(24194-24228)
[»] scaffold0098 (1 HSPs)
scaffold0098 (397-431)||(4208-4242)
[»] scaffold0037 (1 HSPs)
scaffold0037 (397-431)||(96692-96726)
[»] scaffold0021 (1 HSPs)
scaffold0021 (397-431)||(23899-23933)
[»] scaffold0734 (1 HSPs)
scaffold0734 (398-431)||(2975-3008)
[»] scaffold0049 (1 HSPs)
scaffold0049 (395-436)||(57391-57432)
[»] scaffold0555 (1 HSPs)
scaffold0555 (392-436)||(6683-6727)
[»] scaffold0473 (1 HSPs)
scaffold0473 (397-425)||(1872-1900)
[»] scaffold0043 (1 HSPs)
scaffold0043 (391-431)||(47322-47362)
[»] scaffold0038 (1 HSPs)
scaffold0038 (397-425)||(29103-29131)
[»] scaffold0014 (1 HSPs)
scaffold0014 (392-428)||(165349-165385)


Alignment Details
Target: chr3 (Bit Score: 153; Significance: 6e-81; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 28807700 - 28807864
Alignment:
Q  18 ggagctaggaacacataaattaataaatattagtttttccattctctcataatattgcaactttccattttataataaaagaatgataaaaatcattgta 117  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28807700 ggagctaggaacacataaattaataaaaatttgtttttccattctctcataatattgcaactttccattttataataaaagaatgataaaaatcattgta 28807799  T
Q  118 agcatatctctataagcagaaacattataataccgtgatttgaattcatgatttctcatttattc 182  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28807800 agcatatctccataagcagaaacattataataccgtgatttgaattcatgatttctcatttattc 28807864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 312
Target Start/End: Original strand, 28807956 - 28807995
Alignment:
Q  273 ttgaacactctgttaatatagtatgacacgtttaaagaag 312  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28807956 ttgaacactctgttaatatagtatgacacgtttaaagaag 28807995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 38442278 - 38442239
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  38442278 ttgggttaatagtgtttttcacccctgtaatataggtcat 38442239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 51831549 - 51831510
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  51831549 ttgggttaatagtgtttttcacccctgtaatataggtcat 51831510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 436
Target Start/End: Complemental strand, 6291827 - 6291781
Alignment:
Q  390 tattggattaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  6291827 tattgggttaatagtgtttttcacccctgtaatataggccatttctg 6291781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 34519880 - 34519914
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  34519880 ttaatagtgtttttcacccctgtaatataggtcat 34519914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 38640400 - 38640434
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  38640400 ttaatagtgtttttcacccctgtaatataggtcat 38640434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 40817003 - 40816969
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  40817003 ttaatagtgtttttcacccctgtaatataggtcat 40816969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 48629576 - 48629542
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  48629576 ttaatagtgtttttcacccctgtaatataggtcat 48629542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 392 - 429
Target Start/End: Complemental strand, 9768292 - 9768255
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtc 429  Q
    |||| |||||||||||||||||||||||||||||||||    
T  9768292 ttgggttaatagtgtttttcacccctgtaatataggtc 9768255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 394 - 427
Target Start/End: Complemental strand, 40718653 - 40718620
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaatatagg 427  Q
    ||||||||||||||||||||||||||||||||||    
T  40718653 ggattaatagtgtttttcacccctgtaatatagg 40718620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 3526529 - 3526576
Alignment:
Q  384 ttttaatattggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||| |||||| |||||||||||||| |||||||||||||| |||||    
T  3526529 ttttattattgggttaatagtgtttttaacccctgtaatatatgtcat 3526576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Original strand, 5154719 - 5154758
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  5154719 ttgggttaatagtgtttttcacccctgtaatatatgtcat 5154758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 7014732 - 7014771
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  7014732 ttaatagtgtttttcacccctgtaatatatgtcatttctg 7014771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 7015015 - 7014976
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  7015015 ttgggttaatagtgtttttcacccctgtaatatatgtcat 7014976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Original strand, 7731268 - 7731307
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  7731268 ttgggttaatagtgtttttcacccctgtaatatatgtcat 7731307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Original strand, 40810759 - 40810798
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||| |||||||||||||||||||||||||||||    
T  40810759 ttgggttaatggtgtttttcacccctgtaatataggtcat 40810798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 3526821 - 3526787
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  3526821 ttaatagtgtttttcacccctgtaatatatgtcat 3526787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 5047449 - 5047415
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  5047449 ttaatagtgtttttcacccctgtaatatatgtcat 5047415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 6019680 - 6019646
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  6019680 ttaatagtgtttttcacccctgtaatatatgtcat 6019646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 6290876 - 6290906
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  6290876 ttaatagtgtttttcacccctgtaatatagg 6290906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 8763902 - 8763936
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  8763902 ttaatagtgtttttcacccctgtaatatatgtcat 8763936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 9268576 - 9268610
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  9268576 ttaatagtgtttttcacccctgtaatatatgtcat 9268610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 9268855 - 9268821
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  9268855 ttaatagtgtttttcacccctgtaatatatgtcat 9268821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 10265493 - 10265527
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  10265493 ttaatagtgtttttcacccctgtaatatatgtcat 10265527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 436
Target Start/End: Complemental strand, 16871459 - 16871417
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||    
T  16871459 ggattaatagtgtttttcacccttgtaatatatgtcatttctg 16871417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 25484119 - 25484153
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  25484119 ttaatagtgtttttcacccctgtaatatatgtcat 25484153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 33312617 - 33312583
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  33312617 ttaatagtgtttttcacccctgtaatatatgtcat 33312583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 37585639 - 37585673
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  37585639 ttaatagtgtttttcacccctgtaatatatgtcat 37585673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 38440989 - 38441023
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||| |||||||||||||||||||||||||||||    
T  38440989 ttaatggtgtttttcacccctgtaatataggtcat 38441023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 40004157 - 40004123
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  40004157 ttaatagtgtttttcacccctgtaatatatgtcat 40004123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 48628149 - 48628179
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  48628149 ttaatagtgtttttcacccctgtaatatagg 48628179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 54014560 - 54014594
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  54014560 ttaatagtgtttttcacccctgtaatatatgtcat 54014594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 55119427 - 55119457
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  55119427 ttaatagtgtttttcacccctgtaatatagg 55119457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 429
Target Start/End: Complemental strand, 9773526 - 9773489
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtc 429  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  9773526 ttgggttaatagtgtttttcgcccctgtaatataggtc 9773489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 425
Target Start/End: Complemental strand, 23043160 - 23043127
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatata 425  Q
    |||| |||||||||||||||||||||||||||||    
T  23043160 ttgggttaatagtgtttttcacccctgtaatata 23043127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 425
Target Start/End: Original strand, 25024921 - 25024954
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatata 425  Q
    |||| |||||||||||||||||||||||||||||    
T  25024921 ttgggttaatagtgtttttcacccctgtaatata 25024954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 425
Target Start/End: Original strand, 43674179 - 43674212
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatata 425  Q
    |||| |||||||||||||||||||||||||||||    
T  43674179 ttgggttaatagtgtttttcacccctgtaatata 43674212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 431
Target Start/End: Original strand, 55120617 - 55120654
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  55120617 ggattaatagtgtttttcacccctgtgatatatgtcat 55120654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 8128168 - 8128140
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  8128168 ttaatagtgtttttcacccctgtaatata 8128140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 19271622 - 19271650
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  19271622 ttaatagtgtttttcacccctgtaatata 19271650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 26996025 - 26996053
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  26996025 ttaatagtgtttttcacccctgtaatata 26996053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 39825730 - 39825702
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  39825730 ttaatagtgtttttcacccctgtaatata 39825702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 436
Target Start/End: Original strand, 40003873 - 40003917
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    |||| ||||||||| ||||||||||||||||||| ||||| ||||    
T  40003873 ttgggttaatagtgcttttcacccctgtaatatatgtcatttctg 40003917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 40717641 - 40717613
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  40717641 ttaatagtgtttttcacccctgtaatata 40717613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 431
Target Start/End: Complemental strand, 46828062 - 46828022
Alignment:
Q  391 attggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||| ||||||||| |||||| ||||||||||||||||||    
T  46828062 attgggttaatagtgcttttcatccctgtaatataggtcat 46828022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 52866242 - 52866214
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  52866242 ttaatagtgtttttcacccctgtaatata 52866214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 431
Target Start/End: Complemental strand, 26254615 - 26254574
Alignment:
Q  390 tattggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  26254615 tattgggttaatagtgtttttcacccctgtaatataggtcat 26254574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 436
Target Start/End: Complemental strand, 29579996 - 29579952
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  29579996 ttgggttaatagtgtttttcacccctgtaatataggtcatttctg 29579952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 1552739 - 1552778
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  1552739 ttaatagtgtttttcacccctgtaatataggtcatttctg 1552778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 392 - 431
Target Start/End: Original strand, 33330857 - 33330896
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  33330857 ttgggttaatagtgtttttcacccctgtaatataggtcat 33330896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 4100751 - 4100717
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  4100751 ttaatagtgtttttcacccctgtaatataggtcat 4100717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 13199346 - 13199312
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  13199346 ttaatagtgtttttcacccctgtaatataggtcat 13199312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 13200487 - 13200521
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  13200487 ttaatagtgtttttcacccctgtaatataggtcat 13200521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 17713453 - 17713487
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  17713453 ttaatagtgtttttcacccctgtaatataggtcat 17713487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 26253007 - 26253041
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  26253007 ttaatagtgtttttcacccctgtaatataggtcat 26253041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 27418194 - 27418160
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  27418194 ttaatagtgtttttcacccctgtaatataggtcat 27418160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 29579105 - 29579139
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  29579105 ttaatagtgtttttcacccctgtaatataggtcat 29579139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 431
Target Start/End: Complemental strand, 40628462 - 40628422
Alignment:
Q  391 attggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  40628462 attgggttaatagtgtttttcacccctgtaatatatgtcat 40628422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 3260875 - 3260914
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  3260875 ttaatagtgtttttcacccctgtaatatagatcatttctg 3260914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 428
Target Start/End: Original strand, 12317534 - 12317565
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggt 428  Q
    ||||||||||||||||||||||||||||||||    
T  12317534 ttaatagtgtttttcacccctgtaatataggt 12317565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 17159114 - 17159153
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  17159114 ttaatagtgtttttcacccctgtaatatatgtcatttctg 17159153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 22981096 - 22981057
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  22981096 ttgggttaatagtgtttttcacccctgtaatatatgtcat 22981057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Original strand, 27417170 - 27417209
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  27417170 ttgggttaatagtgtttttcacccctgtaatatcggtcat 27417209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Original strand, 40785239 - 40785278
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  40785239 ttgggttaatagtgcttttcacccctgtaatataggtcat 40785278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 116620 - 116654
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  116620 ttaatagtgtttttcacccctgtaatatatgtcat 116654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 1554013 - 1553983
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  1554013 ttaatagtgtttttcacccctgtaatatagg 1553983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 4099647 - 4099677
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  4099647 ttaatagtgtttttcacccctgtaatatagg 4099677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 7504511 - 7504541
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  7504511 ttaatagtgtttttcacccctgtaatatagg 7504541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 7505550 - 7505520
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  7505550 ttaatagtgtttttcacccctgtaatatagg 7505520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 10761210 - 10761176
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  10761210 ttaatagtgtttttcacccctgtaatatatgtcat 10761176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 11967088 - 11967054
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||| ||||||||||||    
T  11967088 ttaatagtgtttttcacccctggaatataggtcat 11967054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 12318766 - 12318732
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||| |||||||||||||||||||||||||    
T  12318766 ttaatagtgcttttcacccctgtaatataggtcat 12318732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 13198096 - 13198130
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||| |||||||||||||||||||||||||    
T  13198096 ttaatagtgcttttcacccctgtaatataggtcat 13198130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 19391637 - 19391667
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  19391637 ttaatagtgtttttcacccctgtaatatagg 19391667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 23590025 - 23589991
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||| ||||||||||||||||||||||||||||    
T  23590025 ttaataatgtttttcacccctgtaatataggtcat 23589991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 23810615 - 23810581
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||| ||||||||||||||||||||||||||    
T  23810615 ttaatagtatttttcacccctgtaatataggtcat 23810581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 28004643 - 28004677
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  28004643 ttaatagtgtttttcacccctgtaatatatgtcat 28004677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 28061945 - 28061979
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  28061945 ttaatagtgtttttcacccctgtaatatatgtcat 28061979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 28889030 - 28889060
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  28889030 ttaatagtgtttttcacccctgtaatatagg 28889060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 28890104 - 28890074
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  28890104 ttaatagtgtttttcacccctgtaatatagg 28890074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 28907689 - 28907719
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  28907689 ttaatagtgtttttcacccctgtaatatagg 28907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 28908762 - 28908732
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  28908762 ttaatagtgtttttcacccctgtaatatagg 28908732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 426
Target Start/End: Complemental strand, 32901637 - 32901603
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatatag 426  Q
    ||||||||||||||||||| |||||||||||||||    
T  32901637 ttggattaatagtgtttttgacccctgtaatatag 32901603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 34663596 - 34663566
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  34663596 ttaatagtgtttttcacccctgtaatatagg 34663566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 34820575 - 34820609
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||| |||||||||||||||||||||||||    
T  34820575 ttaatagtgcttttcacccctgtaatataggtcat 34820609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 34821692 - 34821662
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  34821692 ttaatagtgtttttcacccctgtaatatagg 34821662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 43722238 - 43722268
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  43722238 ttaatagtgtttttcacccctgtaatatagg 43722268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 43723683 - 43723649
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||| ||||||||    
T  43723683 ttaatagtgtttttcacccctgtaatctaggtcat 43723649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 431
Target Start/End: Complemental strand, 14152692 - 14152659
Alignment:
Q  398 taatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||| |||||    
T  14152692 taatagtgtttttcacccctgtaatatatgtcat 14152659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 431
Target Start/End: Complemental strand, 41509757 - 41509720
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||| | |||||||||||||||||||    
T  41509757 ggattaatagtgttttacccccctgtaatataggtcat 41509720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 427
Target Start/End: Original strand, 43897697 - 43897738
Alignment:
Q  386 ttaatattggattaatagtgtttttcacccctgtaatatagg 427  Q
    |||| ||||| ||||||||||||||||||| |||||||||||    
T  43897697 ttaaaattgggttaatagtgtttttcacccttgtaatatagg 43897738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 11966041 - 11966069
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  11966041 ttaatagtgtttttcacccctgtaatata 11966069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 431
Target Start/End: Complemental strand, 17750135 - 17750103
Alignment:
Q  399 aatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||| |||||    
T  17750135 aatagtgtttttcacccctgtaatatatgtcat 17750103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 431
Target Start/End: Complemental strand, 17759122 - 17759090
Alignment:
Q  399 aatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||| |||||    
T  17759122 aatagtgtttttcacccctgtaatatatgtcat 17759090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 22980813 - 22980841
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  22980813 ttaatagtgtttttcacccctgtaatata 22980841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 23352282 - 23352254
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  23352282 ttaatagtgtttttcacccctgtaatata 23352254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 43681473 - 43681445
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  43681473 ttaatagtgtttttcacccctgtaatata 43681445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 163400 - 163348
Alignment:
Q  384 ttttaatattggattaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||| || ||||||||||||||||||||||||||||| ||||| ||||    
T  163400 ttttaatatagggttaatagtgtttttcacccctgtaatatatgtcatttctg 163348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 436
Target Start/End: Original strand, 5613717 - 5613761
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  5613717 ttgggttaatagtgtttttcacccctgtaatataggtcatttctg 5613761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 7611479 - 7611440
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  7611479 ttaatagtgtttttcacccctgtaatataggtcatttctg 7611440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 3787242 - 3787276
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  3787242 ttaatagtgtttttcacccctgtaatataggtcat 3787276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 431
Target Start/End: Complemental strand, 5614014 - 5613976
Alignment:
Q  393 tggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  5614014 tggattaatagtgtttttcacccctctaatataggtcat 5613976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 7610458 - 7610492
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  7610458 ttaatagtgtttttcacccctgtaatataggtcat 7610492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 7702106 - 7702140
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  7702106 ttaatagtgtttttcacccctgtaatataggtcat 7702140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 8264113 - 8264079
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  8264113 ttaatagtgtttttcacccctgtaatataggtcat 8264079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 431
Target Start/End: Original strand, 16279225 - 16279267
Alignment:
Q  389 atattggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||| ||||||||| |||||||||||||||||||||||||    
T  16279225 atattgggttaatagtgcttttcacccctgtaatataggtcat 16279267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 17201636 - 17201670
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  17201636 ttaatagtgtttttcacccctgtaatataggtcat 17201670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 394 - 431
Target Start/End: Original strand, 24169107 - 24169144
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||| |||||    
T  24169107 ggattaatagtgtttttcacccctgtaatatatgtcat 24169144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 394 - 431
Target Start/End: Complemental strand, 28362661 - 28362624
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||| |||||    
T  28362661 ggattaatagtgtttttcacccctgtaatatatgtcat 28362624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 397 - 430
Target Start/End: Complemental strand, 33465891 - 33465858
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtca 430  Q
    ||||||||||||||||||||||||||||||||||    
T  33465891 ttaatagtgtttttcacccctgtaatataggtca 33465858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 1613875 - 1613836
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  1613875 ttaatagtgtttttcacccctgtaatatatgtcatttctg 1613836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 6953883 - 6953922
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  6953883 ttaatagtgtttttcacccctgtaatatatgtcatttctg 6953922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Original strand, 15734472 - 15734511
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  15734472 ttgggttaatagtgtttttcacccctgtaatatatgtcat 15734511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 26743098 - 26743059
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  26743098 ttgggttaatagtgtttttcacctctgtaatataggtcat 26743059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 45323469 - 45323430
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  45323469 ttaatagtgtttttcacccctgtaatatatgtcatttctg 45323430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Original strand, 51237960 - 51237999
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  51237960 ttgggttaatagtgtttttcacccctgtaatatatgtcat 51237999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 8262747 - 8262781
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||| |||||||||||||||||||||||||||    
T  8262747 ttaatagagtttttcacccctgtaatataggtcat 8262781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 11586511 - 11586477
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  11586511 ttaatagtgtttttcacccctgtaatatatgtcat 11586477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 12887035 - 12887001
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  12887035 ttaatagtgtttttcacccctgtaatatatgtcat 12887001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 13146351 - 13146317
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||| |||||||||||||||    
T  13146351 ttaatagtgtttttcacccttgtaatataggtcat 13146317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 13769924 - 13769894
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  13769924 ttaatagtgtttttcacccctgtaatatagg 13769894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 15234250 - 15234216
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||| |||||||||||||||||||||||||    
T  15234250 ttaatagtgcttttcacccctgtaatataggtcat 15234216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 16280981 - 16280947
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||| |||||||||||||||    
T  16280981 ttaatagtgtttttcacccatgtaatataggtcat 16280947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 16290623 - 16290657
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||| |||||||||    
T  16290623 ttaatagtgtttttcacccctgtaaaataggtcat 16290657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 22374565 - 22374599
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  22374565 ttaatagtgtttttcacccctgtaatatatgtcat 22374599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 425
Target Start/End: Complemental strand, 29525910 - 29525876
Alignment:
Q  391 attggattaatagtgtttttcacccctgtaatata 425  Q
    ||||| |||||||||||||||||||||||||||||    
T  29525910 attgggttaatagtgtttttcacccctgtaatata 29525876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 431
Target Start/End: Complemental strand, 29641882 - 29641840
Alignment:
Q  389 atattggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||    
T  29641882 atattgggttaatagtgattttcacccctgtaatatatgtcat 29641840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 436
Target Start/End: Original strand, 42127786 - 42127828
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||    
T  42127786 ggattaatagtgcttttcacccctgtaatatatgtcatttctg 42127828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 431
Target Start/End: Complemental strand, 43064343 - 43064310
Alignment:
Q  398 taatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| |||||||||||||||||||||||||||||    
T  43064343 taattgtgtttttcacccctgtaatataggtcat 43064310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 425
Target Start/End: Original strand, 44345003 - 44345036
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatata 425  Q
    |||| |||||||||||||||||||||||||||||    
T  44345003 ttggtttaatagtgtttttcacccctgtaatata 44345036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 431
Target Start/End: Original strand, 1340679 - 1340719
Alignment:
Q  391 attggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||| ||||||||| ||||||||||||||||||| |||||    
T  1340679 attgggttaatagtgcttttcacccctgtaatatatgtcat 1340719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 1819088 - 1819116
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  1819088 ttaatagtgtttttcacccctgtaatata 1819116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 9631937 - 9631909
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  9631937 ttaatagtgtttttcacccctgtaatata 9631909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 394 - 426
Target Start/End: Complemental strand, 16291931 - 16291899
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaatatag 426  Q
    ||||||||||||||||||| |||||||||||||    
T  16291931 ggattaatagtgtttttcaaccctgtaatatag 16291899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 23284961 - 23284933
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  23284961 ttaatagtgtttttcacccctgtaatata 23284933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 25395421 - 25395449
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  25395421 ttaatagtgtttttcacccctgtaatata 25395449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 436
Target Start/End: Original strand, 29525621 - 29525665
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    |||| |||||| |||||||||||||||||||||| ||||| ||||    
T  29525621 ttgggttaatattgtttttcacccctgtaatatatgtcatttctg 29525665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 37216522 - 37216494
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  37216522 ttaatagtgtttttcacccctgtaatata 37216494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 40633370 - 40633342
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  40633370 ttaatagtgtttttcacccctgtaatata 40633342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 29105636 - 29105597
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  29105636 ttgggttaatagtgtttttcacccctgtaatataggtcat 29105597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 813700 - 813666
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  813700 ttaatagtgtttttcacccctgtaatataggtcat 813666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 3223045 - 3223079
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  3223045 ttaatagtgtttttcacccctgtaatataggtcat 3223079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 3333072 - 3333038
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  3333072 ttaatagtgtttttcacccctgtaatataggtcat 3333038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 11684229 - 11684263
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  11684229 ttaatagtgtttttcacccctgtaatataggtcat 11684263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 11685318 - 11685284
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  11685318 ttaatagtgtttttcacccctgtaatataggtcat 11685284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 431
Target Start/End: Complemental strand, 18318750 - 18318712
Alignment:
Q  393 tggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  18318750 tggattaatagtgtttttcacccctgtaatatatgtcat 18318712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 23050230 - 23050196
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  23050230 ttaatagtgtttttcacccctgtaatataggtcat 23050196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 42042951 - 42042917
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  42042951 ttaatagtgtttttcacccctgtaatataggtcat 42042917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 394 - 431
Target Start/End: Complemental strand, 15984466 - 15984429
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||| |||||    
T  15984466 ggattaatagtgtttttcacccctgtaatatatgtcat 15984429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 45824488 - 45824448
Alignment:
Q  387 taatattggattaatagtgtttttcacccctgtaatatagg 427  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  45824488 taataatgggttaatagtgtttttcacccctgtaatatagg 45824448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 427
Target Start/End: Original strand, 299367 - 299402
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatatagg 427  Q
    |||| |||||||||||||||||||||||||||||||    
T  299367 ttgggttaatagtgtttttcacccctgtaatatagg 299402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Original strand, 4098095 - 4098134
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  4098095 ttgggttaatagtgtttttcacccctgtaatatatgtcat 4098134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 427
Target Start/End: Original strand, 4698931 - 4698970
Alignment:
Q  388 aatattggattaatagtgtttttcacccctgtaatatagg 427  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  4698931 aatatagggttaatagtgtttttcacccctgtaatatagg 4698970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 428
Target Start/End: Complemental strand, 9556858 - 9556827
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggt 428  Q
    ||||||||||||||||||||||||||||||||    
T  9556858 ttaatagtgtttttcacccctgtaatataggt 9556827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 12179933 - 12179972
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  12179933 ttaatagtgtttttcacccctgtaatatatgtcatttctg 12179972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 15093739 - 15093700
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  15093739 ttaatagtgtttttcacccctgtaatatatgtcatttctg 15093700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 23774954 - 23774993
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  23774954 ttaatagtgtttttcacccctgtaatatatgtcatttctg 23774993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 23775179 - 23775140
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  23775179 ttgggttaatagtgtttttcacccctgtaatatatgtcat 23775140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 31079113 - 31079152
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  31079113 ttaatagtgtttttcacccctgtaatatatgtcatttctg 31079152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 31079392 - 31079353
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  31079392 ttaatagtgtttttcacccctgtaatatatgtcatttctg 31079353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 41745092 - 41745131
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  41745092 ttaatagtgtttttcacccctgtaatatatgtcatttctg 41745131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 300456 - 300426
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  300456 ttaatagtgtttttcacccctgtaatatagg 300426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 4650554 - 4650584
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  4650554 ttaatagtgtttttcacccctgtaatatagg 4650584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 4651656 - 4651626
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  4651656 ttaatagtgtttttcacccctgtaatatagg 4651626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 4700083 - 4700053
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  4700083 ttaatagtgtttttcacccctgtaatatagg 4700053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 7881698 - 7881664
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  7881698 ttaatagtgtttttcacccctgtaatatatgtcat 7881664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 11666759 - 11666793
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  11666759 ttaatagtgtttttcacccctgtaatatatgtcat 11666793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 16274472 - 16274506
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  16274472 ttaatagtgtttttcacccctgtaatatatgtcat 16274506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 16986755 - 16986721
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||| ||||||||    
T  16986755 ttaatagtgtttttcacccctgtaatctaggtcat 16986721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 17358286 - 17358252
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  17358286 ttaatagtgtttttcacccctgtaatatatgtcat 17358252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 20033945 - 20033911
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  20033945 ttaatagtgtttttcacccctgtaatatatgtcat 20033911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 21907541 - 21907575
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||| |||||||||||||||||||||||||    
T  21907541 ttaatagtgcttttcacccctgtaatataggtcat 21907575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 22947649 - 22947615
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  22947649 ttaatagtgtttttcacccctgtaatatatgtcat 22947615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 24919951 - 24919917
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  24919951 ttaatagtgtttttcacccctgtaatatatgtcat 24919917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 25728473 - 25728439
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  25728473 ttaatagtgtttttcacccctgtaatatatgtcat 25728439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 30165477 - 30165511
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  30165477 ttaatagtgtttttcacccctgtaatatatgtcat 30165511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 31298830 - 31298796
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  31298830 ttaatagtgtttttcacccctgtaatatatgtcat 31298796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 37079808 - 37079842
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||| |||||||||||||||||||||||||    
T  37079808 ttaatagtgcttttcacccctgtaatataggtcat 37079842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 37101593 - 37101559
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  37101593 ttaatagtgtttttcacccctgtaatatatgtcat 37101559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 38651787 - 38651821
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  38651787 ttaatagtgtttttcacccctgtaatatatgtcat 38651821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 43989047 - 43989081
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  43989047 ttaatagtgtttttcacccctgtaatatatgtcat 43989081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 47668131 - 47668165
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  47668131 ttaatagtgtttttcacccctgtaatatatgtcat 47668165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 49100366 - 49100332
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||| |||||||||||||||||||||||||    
T  49100366 ttaatagtgcttttcacccctgtaatataggtcat 49100332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 431
Target Start/End: Complemental strand, 3224339 - 3224298
Alignment:
Q  390 tattggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||| ||||||||| |||||||| ||||||||||||||||    
T  3224339 tattgggttaatagtgcttttcacctctgtaatataggtcat 3224298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 425
Target Start/End: Original strand, 28311101 - 28311138
Alignment:
Q  388 aatattggattaatagtgtttttcacccctgtaatata 425  Q
    ||||| || |||||||||||||||||||||||||||||    
T  28311101 aatatagggttaatagtgtttttcacccctgtaatata 28311138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 430
Target Start/End: Complemental strand, 46483904 - 46483871
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtca 430  Q
    ||||||||||||||||||||||||||||| ||||    
T  46483904 ttaatagtgtttttcacccctgtaatatatgtca 46483871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 3216052 - 3216080
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  3216052 ttaatagtgtttttcacccctgtaatata 3216080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 12180212 - 12180184
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  12180212 ttaatagtgtttttcacccctgtaatata 12180184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 436
Target Start/End: Complemental strand, 18449644 - 18449601
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||    
T  18449644 ttggattaatagtgtttt-cacccctgtaatatatgtcatttctg 18449601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 431
Target Start/End: Complemental strand, 22323160 - 22323120
Alignment:
Q  391 attggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||| ||||||||| |||||||||||||||||||| ||||    
T  22323160 attgggttaatagtgcttttcacccctgtaatatagatcat 22323120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 24438940 - 24438912
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  24438940 ttaatagtgtttttcacccctgtaatata 24438912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 34348217 - 34348189
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  34348217 ttaatagtgtttttcacccctgtaatata 34348189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 38415900 - 38415928
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  38415900 ttaatagtgtttttcacccctgtaatata 38415928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 43741982 - 43742010
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  43741982 ttaatagtgtttttcacccctgtaatata 43742010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 1950091 - 1950052
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  1950091 ttgggttaatagtgtttttcacccctgtaatataggtcat 1950052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 26394213 - 26394179
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  26394213 ttaatagtgtttttcacccctgtaatataggtcat 26394179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 32637467 - 32637501
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  32637467 ttaatagtgtttttcacccctgtaatataggtcat 32637501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 38031959 - 38031993
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  38031959 ttaatagtgtttttcacccctgtaatataggtcat 38031993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 39987138 - 39987172
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  39987138 ttaatagtgtttttcacccctgtaatataggtcat 39987172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 41825047 - 41825081
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  41825047 ttaatagtgtttttcacccctgtaatataggtcat 41825081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 394 - 431
Target Start/End: Original strand, 5105102 - 5105139
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||| |||||    
T  5105102 ggattaatagtgtttttcacccctgtaatatatgtcat 5105139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 427
Target Start/End: Complemental strand, 39987406 - 39987370
Alignment:
Q  391 attggattaatagtgtttttcacccctgtaatatagg 427  Q
    ||||| |||||||||||||||||||||||||||||||    
T  39987406 attgggttaatagtgtttttcacccctgtaatatagg 39987370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 425
Target Start/End: Original strand, 6802072 - 6802107
Alignment:
Q  390 tattggattaatagtgtttttcacccctgtaatata 425  Q
    |||||| |||||||||||||||||||||||||||||    
T  6802072 tattgggttaatagtgtttttcacccctgtaatata 6802107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Original strand, 16867758 - 16867797
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  16867758 ttgggttaatagtgtttttcacccctgtaatatatgtcat 16867797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 21262886 - 21262847
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  21262886 ttaatagtgtttttcacccctgtaatatatgtcatttctg 21262847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Original strand, 26006511 - 26006550
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  26006511 ttgggttaatagtgtttttcacccctgtaatatatgtcat 26006550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 26524680 - 26524641
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  26524680 ttgggttaatagtgtttttcacccctgtaatatatgtcat 26524641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 29989752 - 29989713
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  29989752 ttgggttaatagtgtttttcacccctgtaatatatgtcat 29989713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 1948763 - 1948797
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||| |||||||||||||||||||||||||||||    
T  1948763 ttaattgtgtttttcacccctgtaatataggtcat 1948797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 10542331 - 10542297
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  10542331 ttaatagtgtttttcacccctgtaatatatgtcat 10542297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 13003800 - 13003834
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  13003800 ttaatagtgtttttcacccctgtaatatatgtcat 13003834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 13006702 - 13006668
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  13006702 ttaatagtgtttttcacccctgtaatatatgtcat 13006668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 13078458 - 13078492
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  13078458 ttaatagtgtttttcacccctgtaatatatgtcat 13078492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 13078721 - 13078687
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  13078721 ttaatagtgtttttcacccctgtaatatatgtcat 13078687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 20884036 - 20884070
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  20884036 ttaatagtgtttttcacccctgtaatatatgtcat 20884070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 22563288 - 22563258
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  22563288 ttaatagtgtttttcacccctgtaatatagg 22563258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 22833683 - 22833649
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  22833683 ttaatagtgtttttcacccctgtaatatatgtcat 22833649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 25354585 - 25354551
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||| |||||||||||||||||||||||||    
T  25354585 ttaatagtgcttttcacccctgtaatataggtcat 25354551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 29690747 - 29690713
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  29690747 ttaatagtgtttttcacccctgtaatatatgtcat 29690713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 29989467 - 29989501
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  29989467 ttaatagtgtttttcacccctgtaatatatgtcat 29989501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 431
Target Start/End: Complemental strand, 40616483 - 40616445
Alignment:
Q  393 tggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  40616483 tggattaatagtgtttttcacccctataatatatgtcat 40616445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 41826310 - 41826280
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  41826310 ttaatagtgtttttcacccctgtaatatagg 41826280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 431
Target Start/End: Complemental strand, 7885067 - 7885027
Alignment:
Q  391 attggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||| |||||||||||||| |||||||||||||| |||||    
T  7885067 attgggttaatagtgtttttaacccctgtaatatatgtcat 7885027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 11762251 - 11762279
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  11762251 ttaatagtgtttttcacccctgtaatata 11762279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 19635132 - 19635104
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  19635132 ttaatagtgtttttcacccctgtaatata 19635104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 431
Target Start/End: Original strand, 20960856 - 20960900
Alignment:
Q  387 taatattggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| |||||||||| ||||||| | |||||||||||||||||||    
T  20960856 taatgttggattaatggtgttttactcccctgtaatataggtcat 20960900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 27829958 - 27829986
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  27829958 ttaatagtgtttttcacccctgtaatata 27829986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 27830240 - 27830212
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  27830240 ttaatagtgtttttcacccctgtaatata 27830212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 38678459 - 38678431
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  38678459 ttaatagtgtttttcacccctgtaatata 38678431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 55483844 - 55483805
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  55483844 ttgggttaatagtgtttttcacccctgtaatataggtcat 55483805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 3849826 - 3849860
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  3849826 ttaatagtgtttttcacccctgtaatataggtcat 3849860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 8652888 - 8652854
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  8652888 ttaatagtgtttttcacccctgtaatataggtcat 8652854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 8664695 - 8664661
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  8664695 ttaatagtgtttttcacccctgtaatataggtcat 8664661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 31067949 - 31067983
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  31067949 ttaatagtgtttttcacccctgtaatataggtcat 31067983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 55482517 - 55482551
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  55482517 ttaatagtgtttttcacccctgtaatataggtcat 55482551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 388 - 425
Target Start/End: Original strand, 28755078 - 28755115
Alignment:
Q  388 aatattggattaatagtgtttttcacccctgtaatata 425  Q
    |||||||| |||||||||||||||||||||||||||||    
T  28755078 aatattgggttaatagtgtttttcacccctgtaatata 28755115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 9663209 - 9663248
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  9663209 ttaatagtgtttttcacccctgtaatatatgtcatttctg 9663248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 17138101 - 17138140
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  17138101 ttaatagtgtttttcacctctgtaatataggtcatttctg 17138140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Original strand, 54553082 - 54553121
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  54553082 ttgggttaatagtgtttttcacccccgtaatataggtcat 54553121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 32677 - 32643
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  32677 ttaatagtgtttttcacccctgtaatatatgtcat 32643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 15323432 - 15323466
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  15323432 ttaatagtgtttttcacccctgtaatatatgtcat 15323466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 17138813 - 17138783
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  17138813 ttaatagtgtttttcacccctgtaatatagg 17138783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 18638415 - 18638381
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  18638415 ttaatagtgtttttcacccctgtaatatatgtcat 18638381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 19675891 - 19675857
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  19675891 ttaatagtgtttttcacccctgtaatatatgtcat 19675857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 22624385 - 22624351
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||| |||||||||||||||    
T  22624385 ttaatagtgtttttcacccttgtaatataggtcat 22624351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 23943890 - 23943920
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  23943890 ttaatagtgtttttcacccctgtaatatagg 23943920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 23944990 - 23944960
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  23944990 ttaatagtgtttttcacccctgtaatatagg 23944960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 34442607 - 34442641
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||| |||||||||||||||||||||||||    
T  34442607 ttaatagtgcttttcacccctgtaatataggtcat 34442641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 39702002 - 39702032
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  39702002 ttaatagtgtttttcacccctgtaatatagg 39702032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 39702488 - 39702454
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||| |||||||||||||||||||||    
T  39702488 ttaatagtgttttacacccctgtaatataggtcat 39702454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 47465181 - 47465219
Alignment:
Q  398 taatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  47465181 taatagtgtttttcacccctgtaatatatgtcatttctg 47465219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 49236581 - 49236547
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  49236581 ttaatagtgtttttcacccctgtaatatatgtcat 49236547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 49625710 - 49625744
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||| ||||||||||||||||||    
T  49625710 ttaatagtgtttttcatccctgtaatataggtcat 49625744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 54442265 - 54442231
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  54442265 ttaatagtgtttttcacccctgtaatatatgtcat 54442231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 54554165 - 54554135
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  54554165 ttaatagtgtttttcacccctgtaatatagg 54554135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 431
Target Start/End: Original strand, 9150722 - 9150759
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  9150722 ggattaatagtgcttttcacccctgtaatatatgtcat 9150759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 431
Target Start/End: Original strand, 15977286 - 15977323
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  15977286 ggattaatagtgtttttcacccctctaatatatgtcat 15977323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 19495407 - 19495448
Alignment:
Q  390 tattggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||| ||||||||||||||||||| ||||||||| |||||    
T  19495407 tattgggttaatagtgtttttcacccttgtaatatatgtcat 19495448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 431
Target Start/End: Original strand, 45617465 - 45617498
Alignment:
Q  398 taatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||| |||||    
T  45617465 taatagtgtttttcacccctgtaatatatgtcat 45617498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 431
Target Start/End: Original strand, 3238412 - 3238452
Alignment:
Q  391 attggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||| ||||||||||||||||||| ||||||||| |||||    
T  3238412 attgggttaatagtgtttttcacccttgtaatatatgtcat 3238452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 6457411 - 6457439
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  6457411 ttaatagtgtttttcacccctgtaatata 6457439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 8401208 - 8401236
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  8401208 ttaatagtgtttttcacccctgtaatata 8401236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 13168787 - 13168815
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  13168787 ttaatagtgtttttcacccctgtaatata 13168815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 427
Target Start/End: Complemental strand, 31068769 - 31068734
Alignment:
Q  391 attggattaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||| ||||||||||||||    
T  31068769 attggattaatagtgtttttca-ccctgtaatatagg 31068734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 39534066 - 39534094
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  39534066 ttaatagtgtttttcacccctgtaatata 39534094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 27199181 - 27199142
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  27199181 ttaatagtgtttttcacccctgtaatataggtcatttctg 27199142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 27854608 - 27854569
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  27854608 ttaatagtgtttttcacccctgtaatataggtcatttctg 27854569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 388 - 431
Target Start/End: Original strand, 43440467 - 43440510
Alignment:
Q  388 aatattggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||| || |||||||||||||||||||||||||||||||||||    
T  43440467 aatatagggttaatagtgtttttcacccctgtaatataggtcat 43440510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 43441842 - 43441803
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  43441842 ttgggttaatagtgtttttcacccctgtaatataggtcat 43441803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 6317489 - 6317455
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  6317489 ttaatagtgtttttcacccctgtaatataggtcat 6317455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 431
Target Start/End: Original strand, 20891619 - 20891657
Alignment:
Q  393 tggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  20891619 tggattaatagtgtttttcacccctgtaatatatgtcat 20891657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 39163826 - 39163860
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  39163826 ttaatagtgtttttcacccctgtaatataggtcat 39163860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 42631781 - 42631815
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  42631781 ttaatagtgtttttcacccctgtaatataggtcat 42631815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 427
Target Start/End: Original strand, 10245852 - 10245892
Alignment:
Q  387 taatattggattaatagtgtttttcacccctgtaatatagg 427  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  10245852 taattttgggttaatagtgtttttcacccctgtaatatagg 10245892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 431
Target Start/End: Original strand, 22265132 - 22265172
Alignment:
Q  391 attggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  22265132 attgggttaatagtgtttttcacccctgtaatatatgtcat 22265172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 436
Target Start/End: Original strand, 33010796 - 33010840
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||    
T  33010796 ttgggttaatagtgtttttcacccctgtaatatatgtcatttctg 33010840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 24388891 - 24388852
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  24388891 ttgggttaatagtgtttttcacccctgtaatatatgtcat 24388852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 2077047 - 2077081
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  2077047 ttaatagtgtttttcacccctgtaatatatgtcat 2077081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 2077325 - 2077291
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  2077325 ttaatagtgtttttcacccctgtaatatatgtcat 2077291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 5157357 - 5157323
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||| |||||||||||||||||||||||||    
T  5157357 ttaatagtgcttttcacccctgtaatataggtcat 5157323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 5513486 - 5513520
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  5513486 ttaatagtgtttttcacccctgtaatatatgtcat 5513520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 5529206 - 5529172
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  5529206 ttaatagtgtttttcacccctgtaatatatgtcat 5529172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 5863189 - 5863223
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  5863189 ttaatagtgtttttcacccctgtaatatatgtcat 5863223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 8224392 - 8224426
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  8224392 ttaatagtgtttttcacccctgtaatatatgtcat 8224426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 10246976 - 10246946
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  10246976 ttaatagtgtttttcacccctgtaatatagg 10246946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 12883085 - 12883119
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  12883085 ttaatagtgtttttcacccctgtaatatatgtcat 12883119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 20101041 - 20101007
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  20101041 ttaatagtgtttttcacccctgtaatatatgtcat 20101007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 20911984 - 20912018
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||| |||||||||||||||||||||||||    
T  20911984 ttaatagtgcttttcacccctgtaatataggtcat 20912018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 20962047 - 20962081
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  20962047 ttaatagtgtttttcacccctgtaatatatgtcat 20962081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 20962326 - 20962292
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  20962326 ttaatagtgtttttcacccctgtaatatatgtcat 20962292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 23081076 - 23081042
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  23081076 ttaatagtgtttttcacccctgtaatatatgtcat 23081042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 27197747 - 27197777
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  27197747 ttaatagtgtttttcacccctgtaatatagg 27197777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 27853174 - 27853204
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  27853174 ttaatagtgtttttcacccctgtaatatagg 27853204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 27926936 - 27926970
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  27926936 ttaatagtgtttttcacccctgtaatatatgtcat 27926970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 34829973 - 34829939
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||| ||||||||||||||||||||||||||||    
T  34829973 ttaataatgtttttcacccctgtaatataggtcat 34829939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 34886469 - 34886435
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||| |||||||||||||||||||    
T  34886469 ttaatagtgtttttcgcccctgtaatataggtcat 34886435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 34963635 - 34963601
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  34963635 ttaatagtgtttttcacccctgtaatatatgtcat 34963601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 36202123 - 36202157
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  36202123 ttaatagtgtttttcacccctgtaatatatgtcat 36202157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 36528961 - 36528995
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||| |||||||||||||||||||||||||    
T  36528961 ttaatagtgcttttcacccctgtaatataggtcat 36528995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 44353905 - 44353939
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  44353905 ttaatagtgtttttcacccctgtaatatatgtcat 44353939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 430
Target Start/End: Complemental strand, 5513765 - 5513732
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtca 430  Q
    ||||||||||||||||||||||||||||| ||||    
T  5513765 ttaatagtgtttttcacccctgtaatatatgtca 5513732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 425
Target Start/End: Complemental strand, 6749007 - 6748974
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatata 425  Q
    |||| |||||||||||||||||||||||||||||    
T  6749007 ttgggttaatagtgtttttcacccctgtaatata 6748974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 431
Target Start/End: Original strand, 8972668 - 8972701
Alignment:
Q  398 taatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||| |||||    
T  8972668 taatagtgtttttcacccctgtaatatatgtcat 8972701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 431
Target Start/End: Complemental strand, 14274513 - 14274472
Alignment:
Q  390 tattggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||| |||||| |||||||||||||||||||||| |||||    
T  14274513 tattgggttaataatgtttttcacccctgtaatatatgtcat 14274472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 425
Target Start/End: Complemental strand, 33216675 - 33216642
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatata 425  Q
    |||| |||||||||||||||||||||||||||||    
T  33216675 ttgggttaatagtgtttttcacccctgtaatata 33216642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 3328933 - 3328961
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  3328933 ttaatagtgtttttcacccctgtaatata 3328961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 8224670 - 8224642
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  8224670 ttaatagtgtttttcacccctgtaatata 8224642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 18386636 - 18386608
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  18386636 ttaatagtgtttttcacccctgtaatata 18386608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 25301592 - 25301564
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  25301592 ttaatagtgtttttcacccctgtaatata 25301564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 44354184 - 44354156
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  44354184 ttaatagtgtttttcacccctgtaatata 44354156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 2186 - 2220
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  2186 ttaatagtgtttttcacccctgtaatataggtcat 2220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 9925 - 9959
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  9925 ttaatagtgtttttcacccctgtaatataggtcat 9959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 11536737 - 11536771
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  11536737 ttaatagtgtttttcacccctgtaatataggtcat 11536771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 11562247 - 11562281
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  11562247 ttaatagtgtttttcacccctgtaatataggtcat 11562281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 16543325 - 16543291
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  16543325 ttaatagtgtttttcacccctgtaatataggtcat 16543291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 16840300 - 16840334
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  16840300 ttaatagtgtttttcacccctgtaatataggtcat 16840334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 21180437 - 21180403
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  21180437 ttaatagtgtttttcacccctgtaatataggtcat 21180403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 22794092 - 22794126
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  22794092 ttaatagtgtttttcacccctgtaatataggtcat 22794126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 26242562 - 26242528
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||||||    
T  26242562 ttaatagtgtttttcacccctgtaatataggtcat 26242528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 436
Target Start/End: Original strand, 15502525 - 15502569
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||    
T  15502525 ttgggttaatagtgtttttcacccctgtaatatatgtcatttctg 15502569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 4211593 - 4211632
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  4211593 ttaatagtgtttttcacccctgtaatatagggcatttctg 4211632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Original strand, 9964351 - 9964390
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  9964351 ttgggttaatagtgtttttcacccctgtaatatatgtcat 9964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Original strand, 17341837 - 17341876
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  17341837 ttgggttaatagtgcttttcacccctgtaatataggtcat 17341876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 431
Target Start/End: Original strand, 27660368 - 27660411
Alignment:
Q  388 aatattggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||| || ||||||||||||||||||||||||||||| |||||    
T  27660368 aatatagggttaatagtgtttttcacccctgtaatatatgtcat 27660411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 28039176 - 28039137
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  28039176 ttaatagtgtttttcacccctgtaatatatgtcatttctg 28039137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 28632054 - 28632015
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  28632054 ttgggttaatagtgtttttcacccctgtaatatatgtcat 28632015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 431
Target Start/End: Original strand, 30240571 - 30240602
Alignment:
Q  400 atagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||||||    
T  30240571 atagtgtttttcacccctgtaatataggtcat 30240602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 431
Target Start/End: Complemental strand, 32131920 - 32131877
Alignment:
Q  388 aatattggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||| || ||||||||| |||||||||||||||||||||||||    
T  32131920 aatatagggttaatagtgcttttcacccctgtaatataggtcat 32131877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 2965854 - 2965820
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  2965854 ttaatagtgtttttcacccctgtaatatatgtcat 2965820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 4212732 - 4212698
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||| |||||||||||||||    
T  4212732 ttaatagtgtttttcacccttgtaatataggtcat 4212698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 4407871 - 4407905
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  4407871 ttaatagtgtttttcacccctgtaatatatgtcat 4407905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 6176695 - 6176729
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  6176695 ttaatagtgtttttcacccctgtaatatatgtcat 6176729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 6176974 - 6176940
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  6176974 ttaatagtgtttttcacccctgtaatatatgtcat 6176940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 10629829 - 10629863
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||| |||||||||||||    
T  10629829 ttaatagtgtttttcacccctataatataggtcat 10629863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 13788044 - 13788078
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  13788044 ttaatagtgtttttcacccctgtaatatatgtcat 13788078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 13796663 - 13796697
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  13796663 ttaatagtgtttttcacccctgtaatatatgtcat 13796697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 14597375 - 14597341
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  14597375 ttaatagtgtttttcacccctgtaatatatgtcat 14597341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 15502810 - 15502776
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  15502810 ttaatagtgtttttcacccctgtaatatatgtcat 15502776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 16542570 - 16542604
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||| ||||||||||||||||||    
T  16542570 ttaatagtgtttttcatccctgtaatataggtcat 16542604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 18699281 - 18699247
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  18699281 ttaatagtgtttttcacccctgtaatatatgtcat 18699247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 19591582 - 19591548
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  19591582 ttaatagtgtttttcacccctgtaatatatgtcat 19591548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 21384004 - 21383970
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  21384004 ttaatagtgtttttcacccctgtaatatatgtcat 21383970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 22043526 - 22043560
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  22043526 ttaatagtgtttttcacccctgtaatatatgtcat 22043560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Complemental strand, 22795266 - 22795236
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  22795266 ttaatagtgtttttcacccctgtaatatagg 22795236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 26241279 - 26241309
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatagg 427  Q
    |||||||||||||||||||||||||||||||    
T  26241279 ttaatagtgtttttcacccctgtaatatagg 26241309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 32009515 - 32009549
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||| ||||||||||||||||||||    
T  32009515 ttaatagtgtttttgacccctgtaatataggtcat 32009549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 425
Target Start/End: Original strand, 7850497 - 7850530
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||| |||||||||    
T  7850497 ttggattaatagtgtttttcacccttgtaatata 7850530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 426
Target Start/End: Complemental strand, 9218503 - 9218474
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatatag 426  Q
    ||||||||||||||||||||||||||||||    
T  9218503 ttaatagtgtttttcacccctgtaatatag 9218474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 431
Target Start/End: Original strand, 10738761 - 10738794
Alignment:
Q  398 taatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||| |||||    
T  10738761 taatagtgtttttcacccctgtaatatatgtcat 10738794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 425
Target Start/End: Complemental strand, 27660662 - 27660629
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatata 425  Q
    |||| |||||||||||||||||||||||||||||    
T  27660662 ttgggttaatagtgtttttcacccctgtaatata 27660629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 428
Target Start/End: Original strand, 18073225 - 18073261
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggt 428  Q
    ||||||||||||||||||||||  |||||||||||||    
T  18073225 ttggattaatagtgtttttcacttctgtaatataggt 18073261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 22043797 - 22043769
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  22043797 ttaatagtgtttttcacccctgtaatata 22043769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 28228605 - 28228633
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  28228605 ttaatagtgtttttcacccctgtaatata 28228633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 394 - 431
Target Start/End: Original strand, 3363 - 3400
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||| |||||    
T  3363 ggattaatagtgtttttcacccctgtaatatatgtcat 3400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 394 - 431
Target Start/End: Original strand, 24763 - 24800
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||||||| |||||    
T  24763 ggattaatagtgtttttcacccctgtaatatatgtcat 24800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 25047 - 25013
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  25047 ttaatagtgtttttcacccctgtaatatatgtcat 25013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 394 - 422
Target Start/End: Original strand, 24669 - 24697
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaat 422  Q
    |||||||||||||||||||||||||||||    
T  24669 ggattaatagtgtttttcacccctgtaat 24697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 425
Target Start/End: Original strand, 1303 - 1334
Alignment:
Q  394 ggattaatagtgtttttcacccctgtaatata 425  Q
    ||||||||||||||||||||||||||||||||    
T  1303 ggattaatagtgtttttcacccctgtaatata 1334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 1553 - 1519
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  1553 ttaatagtgtttttcacccctgtaatatatgtcat 1519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 125602 - 125563
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  125602 ttgggttaatagtgtttttcacccctgtaatatatgtcat 125563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 4527 - 4493
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  4527 ttaatagtgtttttcacccctgtaatatatgtcat 4493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 4247 - 4275
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  4247 ttaatagtgtttttcacccctgtaatata 4275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 24194 - 24228
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  24194 ttaatagtgtttttcacccctgtaatatatgtcat 24228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 4242 - 4208
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  4242 ttaatagtgtttttcacccctgtaatatatgtcat 4208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 96726 - 96692
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  96726 ttaatagtgtttttcacccctgtaatatatgtcat 96692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 23899 - 23933
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||| ||||||||||||||||||||||||||    
T  23899 ttaatagtatttttcacccctgtaatataggtcat 23933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 431
Target Start/End: Original strand, 2975 - 3008
Alignment:
Q  398 taatagtgtttttcacccctgtaatataggtcat 431  Q
    |||||||||||||||||||||||||||| |||||    
T  2975 taatagtgtttttcacccctgtaatatatgtcat 3008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Original strand, 57391 - 57432
Alignment:
Q  395 gattaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||    
T  57391 gattaatagtgtttttcactcctgtaatatatgtcatttctg 57432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 436
Target Start/End: Original strand, 6683 - 6727
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggtcatctctg 436  Q
    |||| |||||||||||||| |||||||||||||| ||||| ||||    
T  6683 ttgggttaatagtgttttttacccctgtaatatatgtcatttctg 6727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 1900 - 1872
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  1900 ttaatagtgtttttcacccctgtaatata 1872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 431
Target Start/End: Complemental strand, 47362 - 47322
Alignment:
Q  391 attggattaatagtgtttttcacccctgtaatataggtcat 431  Q
    ||||| ||||||||||||||||||| ||||||||| |||||    
T  47362 attgggttaatagtgtttttcacccttgtaatatatgtcat 47322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 29103 - 29131
Alignment:
Q  397 ttaatagtgtttttcacccctgtaatata 425  Q
    |||||||||||||||||||||||||||||    
T  29103 ttaatagtgtttttcacccctgtaatata 29131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 428
Target Start/End: Original strand, 165349 - 165385
Alignment:
Q  392 ttggattaatagtgtttttcacccctgtaatataggt 428  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  165349 ttgggttaatagtgtttttcacccttgtaatataggt 165385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University