View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9788_low_41 (Length: 206)
Name: NF9788_low_41
Description: NF9788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9788_low_41 |
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Alignment Details
Target: chr8 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 28587094 - 28586921
Alignment:
| Q |
16 |
agatctatacttgggaacatatggtaaacgtttaccttttcttgttaacttttctattttataaaatatgattggatttagtgaaatgatagtatgagtg |
115 |
Q |
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| T |
28587094 |
agatctatacttgggaacatatggtaaacgtttacctattcttgttaacttttctattttataaaatatgattggatttagtgaaatgatagtatgagtg |
28586995 |
T |
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| Q |
116 |
tatgacaccattagctttaatctactcatatattttaccaatctccccatatattctgtatccatatatattac |
189 |
Q |
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||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28586994 |
tatgacaccattaactttaatctactgatatattttaccaatctccccatatattctgtatccatatatattac |
28586921 |
T |
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