View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9789_high_9 (Length: 267)
Name: NF9789_high_9
Description: NF9789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9789_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 18 - 259
Target Start/End: Complemental strand, 26616796 - 26616555
Alignment:
| Q |
18 |
gacattgcctattgatcaaaagttttttgaggatatcacaacagtgacatctgatcctgggaagaagaatgccgttgtcatgggtagaaaatcatgggag |
117 |
Q |
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| T |
26616796 |
gacattgcctattgatcaaaagttttttgaggatatcacaacagtgacatctgatcctgggaagaagaatgccgttgtcatgggtagaaaatcatgggag |
26616697 |
T |
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| Q |
118 |
gctatccctcctgagaacagacctctcaggggccgtcttaatattattctaactcgctcgggtagttttgaaattgcaactgcagataatgttcttatat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26616696 |
gctatccctcctgagaacagacctctcaggggccgtcttaatattattctaactcgctcgggtagttttgaaattgcaactgcagataatgttcttatat |
26616597 |
T |
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| Q |
218 |
gtggaagtgtatcttctgctatggaactgttggcttcttctc |
259 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
26616596 |
gtggaagtgtatcttctgctatggaactgttggcttcttctc |
26616555 |
T |
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