View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9790_high_19 (Length: 254)
Name: NF9790_high_19
Description: NF9790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9790_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 14 - 253
Target Start/End: Complemental strand, 46901954 - 46901715
Alignment:
| Q |
14 |
cataggtgaggtatacaaagaaagtcaattttgatcatttgtaaattaatagtggttcaaaaacagaactatggtatttaatatttaaaatnnnnnnngt |
113 |
Q |
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| T |
46901954 |
cataggtgaggtatacaaagaaagtcaattttgatcatttgtaaattaatagtggttcaaaaacagaactatggtatttaatatttaaaataaaaaaagt |
46901855 |
T |
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| Q |
114 |
taacaggtgtgtactatttcattgattgcataagttaaaagaactttaattaatcctaatctttttggaacaagaaataatgacaagtcaagtatactta |
213 |
Q |
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| T |
46901854 |
taacaggtgtgtactatttcattgattgcataagttaaaagaacattaattaatcctaatctttttggaacaagaaataatgacaagtcaagtatactta |
46901755 |
T |
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| Q |
214 |
aataaatccgatttcattatttaaagaaatgtattgaata |
253 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
46901754 |
aataaatccgatttcattatttaaagaaatgtattgaata |
46901715 |
T |
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