View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9790_high_33 (Length: 212)
Name: NF9790_high_33
Description: NF9790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9790_high_33 |
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Alignment Details
Target: chr7 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 41197198 - 41197394
Alignment:
| Q |
1 |
tttattttataaaatatatttttctatgtagggtcaacccattaattctcaatattgaacgaggcctaatacaagttttaatatgcagnnnnnnnngtct |
100 |
Q |
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| T |
41197198 |
tttattatatataatatatgtttatatgtagggtcaacccattaattttcaatattgaacgaggcctaatacaagttttaatatgcagttttttttgtct |
41197297 |
T |
|
| Q |
101 |
acataggaggattttttgtctaaaaaaactaatgacaagtaacnnnnnnnnnnnnnnnngataggcctaaatcaatagctttgacaaccttacgtacctt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
41197298 |
acataggaggattttttgtctaaaaaaactaatgacaagtaac-----tttttttttttgataggcctaaatcaatagctttgacaaccttacgtacctt |
41197392 |
T |
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