View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9791_high_12 (Length: 239)
Name: NF9791_high_12
Description: NF9791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9791_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 8498864 - 8498642
Alignment:
| Q |
1 |
gctatatctctctaatctctattatatattatatggacaaagcatggggtctagcacttgatacttcttcatcttctccaattccaatatctcactctca |
100 |
Q |
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| T |
8498864 |
gctatatctctctaatctctattatatattatatggacaaagcatggggtctagctcttgatacttcttcatcttctccaattccaatatctcactctca |
8498765 |
T |
|
| Q |
101 |
cccttttttaccttctaaacaaccatcttctactcataccaacgatagaatgtttcctattctaggatttcctgtcaaccttacccgtaacaccaacggc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8498764 |
cccttttttaccttctaaacaaccatcttctactcataccaacgatagaatgtttcctattctaggatttcctgtcaaccttacccgtaacaccaacggc |
8498665 |
T |
|
| Q |
201 |
gaagacggcggtgaccggaaaat |
223 |
Q |
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|||||||| |||||||||||||| |
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| T |
8498664 |
gaagacgggggtgaccggaaaat |
8498642 |
T |
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