View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9793_high_8 (Length: 280)
Name: NF9793_high_8
Description: NF9793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9793_high_8 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 268; Significance: 1e-150; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 9497197 - 9496918
Alignment:
| Q |
1 |
aaagatattaacgaatgtccaaagctgggatcgttcaggaataagttacaatggaacagagggttttcaactggcttgcaaaagactatgcgagaggcat |
100 |
Q |
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| T |
9497197 |
aaagatattaacgaatgtccaaagctgggatcgttcaggaataagttacaagggaacagagggttttcaactggcttgcaaaagactatgcgagaggcat |
9497098 |
T |
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| Q |
101 |
gcaactgtaagtgcaagtgtgtgttagtaacatcacctacaaaatatactctatacctatacctgtttacagaaagagtcaatctcatcatggagcattc |
200 |
Q |
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| T |
9497097 |
gcaactgtaagtgcaagtgtgtgttagtaacatcacccacaaaatatactctatacctatacctgtttacagaaagagtcaatctcatcatggagcattc |
9496998 |
T |
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| Q |
201 |
cgtgcatggaagataaagatgcacttgttgcagaacagctccgtaactcgggaggttgcaaaggtaaggtaacatccggc |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
9496997 |
cgtgcatggaagataaagatgcacttgttgcagaacagctccgtaactcgggaggttgcagaggtaaggtaacatccggc |
9496918 |
T |
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