View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9794_high_13 (Length: 315)
Name: NF9794_high_13
Description: NF9794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9794_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 10900901 - 10901191
Alignment:
| Q |
1 |
caaaagctaaaaattataaattacagtgtgaaaatgaaaaatttagttttcaacttcaacaactacaagtgtatcattactacaaataataannnnnnnc |
100 |
Q |
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| T |
10900901 |
caaaagctaaaaattataaattacagggtgaaaatgaaaaatttagttttcaacttcaacaactaca-gtgtatcattactacaaataataatttttttc |
10900999 |
T |
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| Q |
101 |
ctgccttctctcttttttcttcgatattctatagaaaatgttgtccgtaagttgttttttctgtatctcataaaactcacaacttacttggcacattgaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
10901000 |
ctgccttctctcttttttcttcgatattctatagaaaatgttgtccgtaagttgttttttctgtatctcataaaactcacaacttacttggtacattgaa |
10901099 |
T |
|
| Q |
201 |
tttacggatttgaaatagttatcattctgactacaagggatgacaatggatgtctcaacttgattactttaatactcatacatggtgagacc |
292 |
Q |
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| T |
10901100 |
tttacggatttgaaatagttatcattctgactacaagggatgacaatggatgtctcaacttgattactttaatactcatacatggtgagacc |
10901191 |
T |
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