View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9794_high_20 (Length: 260)

Name: NF9794_high_20
Description: NF9794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9794_high_20
NF9794_high_20
[»] chr5 (29 HSPs)
chr5 (1-211)||(6551289-6551499)
chr5 (76-211)||(16063669-16063804)
chr5 (111-248)||(660743-660878)
chr5 (108-211)||(18744824-18744927)
chr5 (108-223)||(23199194-23199309)
chr5 (108-206)||(1627071-1627170)
chr5 (109-223)||(32607303-32607418)
chr5 (135-247)||(1626881-1626992)
chr5 (108-223)||(21398631-21398748)
chr5 (135-249)||(26750009-26750122)
chr5 (135-247)||(14025770-14025881)
chr5 (1-57)||(8504679-8504734)
chr5 (135-250)||(8833166-8833280)
chr5 (1-66)||(26761491-26761555)
chr5 (1-53)||(14026850-14026901)
chr5 (1-57)||(20198690-20198745)
chr5 (1-57)||(26749052-26749107)
chr5 (108-165)||(21504090-21504147)
chr5 (132-211)||(20313251-20313328)
chr5 (5-50)||(8834123-8834168)
chr5 (1-50)||(29914352-29914400)
chr5 (158-219)||(31622117-31622178)
chr5 (158-222)||(21300032-21300096)
chr5 (116-172)||(21398833-21398894)
chr5 (5-57)||(21618960-21619011)
chr5 (1-50)||(20470069-20470117)
chr5 (102-162)||(24068173-24068234)
chr5 (135-168)||(26762380-26762413)
chr5 (5-57)||(1628451-1628502)
[»] chr8 (57 HSPs)
chr8 (75-250)||(36732372-36732547)
chr8 (108-248)||(21514641-21514781)
chr8 (108-248)||(4380579-4380719)
chr8 (108-210)||(18816295-18816397)
chr8 (135-223)||(22208246-22208334)
chr8 (105-223)||(22258293-22258411)
chr8 (104-211)||(21676592-21676697)
chr8 (105-211)||(21678845-21678949)
chr8 (116-211)||(12577837-12577932)
chr8 (108-211)||(21399666-21399770)
chr8 (108-211)||(21794159-21794263)
chr8 (108-223)||(18834375-18834487)
chr8 (147-206)||(22483775-22483834)
chr8 (180-250)||(5761555-5761625)
chr8 (147-221)||(22345153-22345227)
chr8 (147-221)||(22356813-22356887)
chr8 (123-211)||(21676499-21676585)
chr8 (135-250)||(17978376-17978490)
chr8 (134-193)||(18023573-18023632)
chr8 (1-56)||(18815905-18815960)
chr8 (1-57)||(36733560-36733615)
chr8 (5-56)||(18819825-18819876)
chr8 (148-223)||(36305988-36306062)
chr8 (138-193)||(38184929-38184984)
chr8 (110-211)||(22610266-22610365)
chr8 (1-63)||(36405948-36406009)
chr8 (1-57)||(4381714-4381770)
chr8 (1-57)||(21513363-21513418)
chr8 (1-57)||(22318862-22318917)
chr8 (135-247)||(22474734-22474845)
chr8 (108-220)||(23884120-23884231)
chr8 (132-190)||(22483912-22483970)
chr8 (5-57)||(6573965-6574017)
chr8 (1-57)||(17979436-17979491)
chr8 (5-57)||(22473608-22473659)
chr8 (5-69)||(38988415-38988478)
chr8 (5-69)||(39019512-39019575)
chr8 (1-57)||(45471405-45471460)
chr8 (1-50)||(23947259-23947308)
chr8 (5-50)||(31723743-31723787)
chr8 (157-257)||(20021994-20022093)
chr8 (5-57)||(20025229-20025280)
chr8 (135-223)||(21579193-21579280)
chr8 (5-57)||(22207292-22207344)
chr8 (158-216)||(39694271-39694329)
chr8 (135-168)||(12037205-12037238)
chr8 (1-50)||(20084572-20084621)
chr8 (102-162)||(22966754-22966815)
chr8 (1-50)||(23888785-23888833)
chr8 (158-215)||(23889799-23889856)
chr8 (135-168)||(29762909-29762942)
chr8 (5-50)||(36728268-36728312)
chr8 (198-250)||(22317871-22317923)
chr8 (158-250)||(22532092-22532184)
chr8 (158-250)||(22536777-22536869)
chr8 (1-57)||(39695466-39695522)
chr8 (1-57)||(39695551-39695607)
[»] scaffold0056 (2 HSPs)
scaffold0056 (108-250)||(18225-18367)
scaffold0056 (1-50)||(66081-66129)
[»] chr7 (60 HSPs)
chr7 (109-250)||(43745607-43745748)
chr7 (79-223)||(19195532-19195676)
chr7 (108-250)||(48212687-48212831)
chr7 (104-211)||(708428-708535)
chr7 (108-250)||(4690623-4690765)
chr7 (108-211)||(15575648-15575751)
chr7 (108-211)||(47095402-47095505)
chr7 (108-211)||(20252181-20252284)
chr7 (135-215)||(8513748-8513828)
chr7 (108-211)||(18874664-18874766)
chr7 (148-221)||(38299738-38299811)
chr7 (135-215)||(8488089-8488169)
chr7 (108-223)||(58400-58513)
chr7 (1-78)||(15576883-15576959)
chr7 (135-223)||(43276731-43276818)
chr7 (108-221)||(15700724-15700836)
chr7 (108-221)||(8930754-8930868)
chr7 (1-57)||(9744071-9744127)
chr7 (108-221)||(25943217-25943330)
chr7 (108-221)||(13744499-13744610)
chr7 (1-57)||(22001175-22001231)
chr7 (108-211)||(36300640-36300741)
chr7 (147-218)||(13315074-13315145)
chr7 (153-223)||(19283051-19283121)
chr7 (108-173)||(16186863-16186928)
chr7 (147-211)||(16250221-16250285)
chr7 (1-57)||(48213864-48213919)
chr7 (110-210)||(15720730-15720831)
chr7 (157-211)||(3287743-3287797)
chr7 (116-211)||(18570604-18570700)
chr7 (108-211)||(33556104-33556207)
chr7 (104-170)||(42565872-42565938)
chr7 (1-57)||(4691744-4691799)
chr7 (1-57)||(14153864-14153919)
chr7 (134-193)||(34958321-34958380)
chr7 (1-57)||(19558245-19558300)
chr7 (1-57)||(47094143-47094198)
chr7 (134-189)||(831871-831926)
chr7 (134-189)||(1197051-1197106)
chr7 (1-56)||(15120213-15120268)
chr7 (21-56)||(15139175-15139210)
chr7 (1-50)||(8136031-8136079)
chr7 (158-223)||(12127150-12127215)
chr7 (1-50)||(14219991-14220040)
chr7 (158-223)||(44374843-44374908)
chr7 (158-223)||(44383708-44383773)
chr7 (142-206)||(15700887-15700951)
chr7 (1-57)||(48809468-48809523)
chr7 (2-41)||(33001020-33001059)
chr7 (158-223)||(8851146-8851211)
chr7 (135-168)||(9743120-9743153)
chr7 (158-223)||(11067468-11067533)
chr7 (158-223)||(12372274-12372339)
chr7 (158-223)||(12465247-12465312)
chr7 (21-50)||(13133482-13133511)
chr7 (158-250)||(24269906-24269999)
chr7 (158-223)||(32433576-32433641)
chr7 (1-41)||(13745965-13746004)
chr7 (21-57)||(16077445-16077481)
chr7 (1-57)||(20253547-20253603)
[»] chr1 (41 HSPs)
chr1 (110-250)||(24719471-24719610)
chr1 (108-220)||(28476724-28476836)
chr1 (104-211)||(38056671-38056778)
chr1 (110-221)||(12710819-12710930)
chr1 (104-212)||(8275987-8276095)
chr1 (127-211)||(50544841-50544925)
chr1 (124-210)||(22145666-22145752)
chr1 (116-223)||(24007212-24007319)
chr1 (108-223)||(8306555-8306671)
chr1 (135-250)||(14792523-14792637)
chr1 (147-221)||(17901783-17901857)
chr1 (108-211)||(34392717-34392821)
chr1 (135-249)||(18121581-18121694)
chr1 (132-221)||(6834150-6834239)
chr1 (116-170)||(39061279-39061333)
chr1 (150-211)||(635003-635064)
chr1 (1-50)||(17904004-17904053)
chr1 (108-223)||(20588585-20588703)
chr1 (108-223)||(20593123-20593241)
chr1 (135-248)||(44892427-44892539)
chr1 (108-221)||(45499491-45499605)
chr1 (1-63)||(14793365-14793426)
chr1 (147-221)||(35895088-35895162)
chr1 (135-248)||(38887049-38887161)
chr1 (1-57)||(18120618-18120673)
chr1 (5-57)||(24720742-24720793)
chr1 (1-57)||(51323376-51323431)
chr1 (158-249)||(24723312-24723403)
chr1 (158-255)||(51324504-51324601)
chr1 (104-170)||(21188073-21188139)
chr1 (5-57)||(7321879-7321930)
chr1 (1-57)||(21240170-21240225)
chr1 (5-57)||(28477659-28477710)
chr1 (5-57)||(44891646-44891697)
chr1 (147-210)||(16401902-16401963)
chr1 (158-223)||(16058301-16058366)
chr1 (158-223)||(19676711-19676776)
chr1 (158-223)||(21046036-21046101)
chr1 (135-168)||(21243799-21243832)
chr1 (102-162)||(40390094-40390155)
chr1 (108-220)||(20708049-20708160)
[»] chr6 (36 HSPs)
chr6 (116-250)||(21683035-21683168)
chr6 (75-221)||(34140445-34140589)
chr6 (75-221)||(34153061-34153205)
chr6 (120-223)||(19825473-19825576)
chr6 (122-225)||(20410497-20410600)
chr6 (108-212)||(15998839-15998943)
chr6 (98-211)||(18982511-18982625)
chr6 (135-211)||(23658066-23658142)
chr6 (108-221)||(10446166-10446280)
chr6 (120-250)||(7217204-7217333)
chr6 (147-221)||(29045260-29045334)
chr6 (135-249)||(18455034-18455147)
chr6 (135-250)||(22557226-22557339)
chr6 (104-170)||(24506155-24506221)
chr6 (108-211)||(1818903-1819005)
chr6 (1-57)||(18458089-18458144)
chr6 (1-66)||(23500707-23500771)
chr6 (1-57)||(21680784-21680839)
chr6 (5-57)||(22556254-22556305)
chr6 (1-57)||(6083693-6083749)
chr6 (1-50)||(23492245-23492293)
chr6 (1-50)||(23497843-23497891)
chr6 (108-168)||(25601371-25601429)
chr6 (21-57)||(19957896-19957932)
chr6 (21-57)||(28947528-28947564)
chr6 (158-250)||(28948575-28948667)
chr6 (122-165)||(18982379-18982422)
chr6 (1-63)||(15895845-15895906)
chr6 (158-223)||(7827972-7828037)
chr6 (134-219)||(13285724-13285809)
chr6 (158-250)||(19235123-19235216)
chr6 (158-223)||(19655218-19655283)
chr6 (158-223)||(23150274-23150339)
chr6 (158-211)||(27329980-27330033)
chr6 (158-211)||(27390720-27390773)
chr6 (135-168)||(31734685-31734718)
[»] chr4 (37 HSPs)
chr4 (108-250)||(26446157-26446299)
chr4 (75-204)||(35660873-35661002)
chr4 (108-211)||(14631085-14631188)
chr4 (108-250)||(2424347-2424489)
chr4 (108-222)||(25513801-25513915)
chr4 (99-211)||(16296879-16296991)
chr4 (104-223)||(9638956-9639075)
chr4 (135-223)||(33186880-33186968)
chr4 (135-223)||(12424277-12424367)
chr4 (116-211)||(15239815-15239911)
chr4 (116-250)||(26921469-26921603)
chr4 (135-250)||(46741177-46741291)
chr4 (108-211)||(9622438-9622542)
chr4 (108-211)||(55583145-55583249)
chr4 (150-215)||(13847193-13847258)
chr4 (1-57)||(35659740-35659796)
chr4 (135-249)||(12623294-12623407)
chr4 (1-57)||(12622450-12622505)
chr4 (147-217)||(10273372-10273442)
chr4 (134-196)||(17142998-17143060)
chr4 (116-168)||(45314124-45314177)
chr4 (134-190)||(15747793-15747849)
chr4 (1-57)||(19566929-19566984)
chr4 (116-170)||(14477590-14477644)
chr4 (135-249)||(19565879-19565992)
chr4 (117-170)||(18462983-18463036)
chr4 (1-57)||(16027020-16027075)
chr4 (5-57)||(26922659-26922710)
chr4 (21-53)||(46225542-46225574)
chr4 (1-50)||(26444888-26444935)
chr4 (1-50)||(9637877-9637926)
chr4 (158-223)||(19610324-19610389)
chr4 (158-223)||(25091653-25091718)
chr4 (158-211)||(37019670-37019723)
chr4 (1-57)||(14507631-14507686)
chr4 (5-57)||(44024427-44024478)
chr4 (158-222)||(53630462-53630526)
[»] scaffold0676 (1 HSPs)
scaffold0676 (99-222)||(2822-2945)
[»] chr2 (29 HSPs)
chr2 (108-249)||(23610576-23610717)
chr2 (110-211)||(21315475-21315576)
chr2 (110-211)||(21335265-21335366)
chr2 (108-223)||(21369243-21369358)
chr2 (158-250)||(19201160-19201252)
chr2 (108-223)||(149488-149607)
chr2 (147-221)||(23801485-23801559)
chr2 (108-211)||(28344987-28345088)
chr2 (108-168)||(28652593-28652654)
chr2 (1-57)||(21336642-21336697)
chr2 (116-170)||(25584302-25584356)
chr2 (1-57)||(21316740-21316795)
chr2 (105-211)||(20005970-20006075)
chr2 (117-211)||(34491239-34491337)
chr2 (21-57)||(1384714-1384750)
chr2 (1-57)||(25085523-25085579)
chr2 (123-170)||(19647199-19647246)
chr2 (104-170)||(45535872-45535938)
chr2 (1-50)||(5985150-5985199)
chr2 (158-223)||(17307486-17307551)
chr2 (1-50)||(18391254-18391302)
chr2 (198-249)||(18388151-18388202)
chr2 (132-211)||(36734450-36734527)
chr2 (1-50)||(3538825-3538873)
chr2 (158-223)||(24780827-24780892)
chr2 (1-50)||(25140957-25141005)
chr2 (21-50)||(27851658-27851687)
chr2 (5-50)||(44071556-44071600)
chr2 (1-57)||(27860354-27860409)
[»] scaffold0516 (2 HSPs)
scaffold0516 (116-248)||(5267-5399)
scaffold0516 (198-248)||(5170-5220)
[»] scaffold1186 (1 HSPs)
scaffold1186 (108-211)||(1970-2073)
[»] scaffold0878 (1 HSPs)
scaffold0878 (102-221)||(3411-3530)
[»] scaffold0005 (1 HSPs)
scaffold0005 (108-211)||(186195-186298)
[»] chr3 (54 HSPs)
chr3 (104-223)||(14641535-14641654)
chr3 (108-211)||(17208474-17208577)
chr3 (108-211)||(14520396-14520499)
chr3 (122-221)||(29907603-29907702)
chr3 (122-221)||(29948769-29948868)
chr3 (122-221)||(29997923-29998022)
chr3 (65-149)||(13520365-13520449)
chr3 (108-248)||(24547150-24547290)
chr3 (148-250)||(24548914-24549016)
chr3 (135-215)||(14152394-14152474)
chr3 (108-223)||(6159354-6159470)
chr3 (108-211)||(22841278-22841386)
chr3 (109-211)||(2841505-2841608)
chr3 (108-210)||(54875474-54875577)
chr3 (138-210)||(5215627-5215699)
chr3 (108-211)||(3527156-3527257)
chr3 (132-203)||(45803338-45803409)
chr3 (108-211)||(6156660-6156763)
chr3 (108-210)||(17684835-17684938)
chr3 (108-257)||(14442124-14442273)
chr3 (135-223)||(15566721-15566809)
chr3 (1-57)||(17207199-17207255)
chr3 (1-57)||(54331353-54331409)
chr3 (134-193)||(2247883-2247942)
chr3 (108-210)||(17669698-17669801)
chr3 (105-170)||(21845691-21845756)
chr3 (1-57)||(24545694-24545749)
chr3 (104-211)||(3160626-3160732)
chr3 (132-211)||(12917305-12917384)
chr3 (116-223)||(50350803-50350912)
chr3 (116-170)||(48631290-48631344)
chr3 (1-50)||(6155703-6155751)
chr3 (108-190)||(50755274-50755357)
chr3 (5-57)||(9511995-9512046)
chr3 (5-57)||(9519970-9520021)
chr3 (1-57)||(17044109-17044164)
chr3 (1-57)||(53646843-53646899)
chr3 (1-50)||(11192016-11192064)
chr3 (1-57)||(14519420-14519475)
chr3 (1-57)||(17259172-17259227)
chr3 (105-211)||(25202081-25202187)
chr3 (157-255)||(11563724-11563821)
chr3 (158-223)||(17044966-17045031)
chr3 (158-223)||(17047126-17047191)
chr3 (158-223)||(17518860-17518925)
chr3 (158-223)||(17533722-17533787)
chr3 (158-223)||(22306570-22306635)
chr3 (158-223)||(49900730-49900795)
chr3 (135-168)||(53646100-53646133)
chr3 (135-168)||(54330348-54330381)
chr3 (108-220)||(6003136-6003247)
chr3 (147-215)||(16050916-16050984)
chr3 (158-222)||(17541434-17541498)
chr3 (147-211)||(48043477-48043539)
[»] scaffold1256 (2 HSPs)
scaffold1256 (123-248)||(2162-2287)
scaffold1256 (1-57)||(324-379)
[»] scaffold0220 (1 HSPs)
scaffold0220 (104-211)||(13895-14002)
[»] scaffold0061 (2 HSPs)
scaffold0061 (105-221)||(14575-14692)
scaffold0061 (105-221)||(23633-23750)
[»] scaffold0328 (1 HSPs)
scaffold0328 (104-223)||(18627-18747)
[»] scaffold0231 (1 HSPs)
scaffold0231 (102-211)||(17520-17629)
[»] scaffold0017 (3 HSPs)
scaffold0017 (116-249)||(26685-26818)
scaffold0017 (2-57)||(25665-25719)
scaffold0017 (105-170)||(23561-23626)
[»] scaffold0247 (1 HSPs)
scaffold0247 (110-210)||(1028-1128)
[»] scaffold0203 (2 HSPs)
scaffold0203 (108-223)||(17927-18042)
scaffold0203 (1-70)||(19074-19142)
[»] scaffold0369 (1 HSPs)
scaffold0369 (108-221)||(15605-15717)
[»] scaffold0007 (4 HSPs)
scaffold0007 (122-248)||(16380-16507)
scaffold0007 (130-250)||(18660-18781)
scaffold0007 (116-165)||(18902-18951)
scaffold0007 (198-250)||(158782-158834)
[»] scaffold0853 (1 HSPs)
scaffold0853 (108-219)||(2445-2558)
[»] scaffold0505 (3 HSPs)
scaffold0505 (116-221)||(4894-4999)
scaffold0505 (1-57)||(1727-1782)
scaffold0505 (5-63)||(3742-3799)
[»] scaffold0108 (2 HSPs)
scaffold0108 (135-250)||(6395-6510)
scaffold0108 (1-57)||(7855-7910)
[»] scaffold0555 (1 HSPs)
scaffold0555 (108-257)||(8700-8849)
[»] scaffold0261 (2 HSPs)
scaffold0261 (116-250)||(6380-6513)
scaffold0261 (1-57)||(7418-7473)
[»] scaffold0213 (3 HSPs)
scaffold0213 (116-223)||(19165-19272)
scaffold0213 (1-63)||(18141-18202)
scaffold0213 (116-157)||(19119-19160)
[»] scaffold0032 (1 HSPs)
scaffold0032 (117-223)||(61835-61940)
[»] scaffold0431 (1 HSPs)
scaffold0431 (135-223)||(5608-5698)
[»] scaffold0594 (1 HSPs)
scaffold0594 (132-211)||(2221-2300)
[»] scaffold0401 (1 HSPs)
scaffold0401 (135-250)||(8799-8913)
[»] scaffold0174 (3 HSPs)
scaffold0174 (108-223)||(19805-19921)
scaffold0174 (149-221)||(5445-5517)
scaffold0174 (132-223)||(11590-11681)
[»] scaffold0039 (1 HSPs)
scaffold0039 (138-248)||(9890-9999)
[»] scaffold0379 (1 HSPs)
scaffold0379 (108-222)||(10897-11011)
[»] scaffold0004 (7 HSPs)
scaffold0004 (132-221)||(66061-66150)
scaffold0004 (180-249)||(328249-328318)
scaffold0004 (108-219)||(75886-75998)
scaffold0004 (142-211)||(111344-111413)
scaffold0004 (108-219)||(73036-73148)
scaffold0004 (1-59)||(109232-109289)
scaffold0004 (1-41)||(67040-67080)
[»] scaffold0628 (2 HSPs)
scaffold0628 (1-57)||(4494-4550)
scaffold0628 (1-57)||(9054-9110)
[»] scaffold0139 (2 HSPs)
scaffold0139 (127-211)||(23503-23587)
scaffold0139 (116-169)||(40204-40257)
[»] scaffold0058 (1 HSPs)
scaffold0058 (102-170)||(59695-59763)
[»] scaffold0031 (1 HSPs)
scaffold0031 (116-221)||(127332-127438)
[»] scaffold0385 (1 HSPs)
scaffold0385 (135-250)||(323-437)
[»] scaffold0439 (2 HSPs)
scaffold0439 (135-247)||(4399-4510)
scaffold0439 (1-51)||(3517-3566)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-57)||(39955-40011)
scaffold0011 (135-250)||(33432-33546)
[»] scaffold0298 (1 HSPs)
scaffold0298 (134-193)||(361-420)
[»] scaffold0086 (3 HSPs)
scaffold0086 (132-211)||(35185-35264)
scaffold0086 (105-206)||(35490-35591)
scaffold0086 (132-206)||(35341-35413)
[»] scaffold0098 (2 HSPs)
scaffold0098 (108-211)||(40056-40160)
scaffold0098 (1-60)||(39174-39233)
[»] scaffold0092 (1 HSPs)
scaffold0092 (105-211)||(38441-38546)
[»] scaffold0859 (1 HSPs)
scaffold0859 (1-57)||(3800-3855)
[»] scaffold0162 (1 HSPs)
scaffold0162 (108-160)||(23932-23984)
[»] scaffold0337 (1 HSPs)
scaffold0337 (104-211)||(3151-3257)
[»] scaffold0125 (1 HSPs)
scaffold0125 (116-170)||(28509-28564)
[»] scaffold0730 (1 HSPs)
scaffold0730 (147-221)||(6494-6568)
[»] scaffold0414 (1 HSPs)
scaffold0414 (108-223)||(11147-11263)
[»] scaffold0371 (2 HSPs)
scaffold0371 (1-57)||(11230-11286)
scaffold0371 (1-50)||(16665-16713)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-57)||(15989-16044)
[»] scaffold0063 (1 HSPs)
scaffold0063 (1-57)||(61806-61861)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-57)||(65922-65977)
[»] scaffold0035 (1 HSPs)
scaffold0035 (105-211)||(43786-43892)
[»] scaffold0180 (1 HSPs)
scaffold0180 (134-193)||(10572-10630)
[»] scaffold0394 (1 HSPs)
scaffold0394 (105-211)||(7513-7618)
[»] scaffold0217 (1 HSPs)
scaffold0217 (108-170)||(28664-28726)
[»] scaffold0021 (2 HSPs)
scaffold0021 (104-170)||(17053-17118)
scaffold0021 (104-170)||(26584-26649)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-50)||(20964-21012)
[»] scaffold0083 (3 HSPs)
scaffold0083 (1-50)||(11651-11700)
scaffold0083 (1-50)||(880-929)
scaffold0083 (1-50)||(6184-6233)
[»] scaffold0205 (1 HSPs)
scaffold0205 (105-211)||(5615-5721)
[»] scaffold0148 (1 HSPs)
scaffold0148 (157-221)||(8843-8907)
[»] scaffold0048 (3 HSPs)
scaffold0048 (1-57)||(56110-56165)
scaffold0048 (198-250)||(57013-57065)
scaffold0048 (147-211)||(68725-68789)
[»] scaffold1223 (1 HSPs)
scaffold1223 (5-50)||(126-170)
[»] scaffold0462 (4 HSPs)
scaffold0462 (1-46)||(437-482)
scaffold0462 (1-46)||(5943-5988)
scaffold0462 (116-154)||(1275-1313)
scaffold0462 (116-154)||(6781-6819)
[»] scaffold0241 (1 HSPs)
scaffold0241 (1-50)||(1464-1513)
[»] scaffold0111 (1 HSPs)
scaffold0111 (158-223)||(12520-12585)
[»] scaffold0059 (1 HSPs)
scaffold0059 (106-250)||(49678-49822)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-54)||(3963-4015)
[»] scaffold0001 (3 HSPs)
scaffold0001 (158-223)||(31994-32059)
scaffold0001 (158-223)||(37301-37366)
scaffold0001 (158-222)||(77687-77751)
[»] scaffold0121 (1 HSPs)
scaffold0121 (21-53)||(19220-19252)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-57)||(64933-64989)
[»] scaffold1939 (1 HSPs)
scaffold1939 (99-165)||(69-135)
[»] scaffold1800 (1 HSPs)
scaffold1800 (105-211)||(555-660)
[»] scaffold0112 (2 HSPs)
scaffold0112 (44-78)||(2013-2047)
scaffold0112 (158-211)||(2889-2942)
[»] scaffold1633 (1 HSPs)
scaffold1633 (158-223)||(1205-1270)
[»] scaffold0956 (1 HSPs)
scaffold0956 (158-223)||(2555-2620)
[»] scaffold0529 (1 HSPs)
scaffold0529 (1-50)||(7410-7459)
[»] scaffold0165 (1 HSPs)
scaffold0165 (105-166)||(31877-31938)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-50)||(54929-54978)
[»] scaffold0047 (1 HSPs)
scaffold0047 (158-223)||(79049-79114)
[»] scaffold0036 (1 HSPs)
scaffold0036 (158-223)||(78172-78237)
[»] scaffold0020 (2 HSPs)
scaffold0020 (135-168)||(174199-174232)
scaffold0020 (158-210)||(143611-143663)
[»] scaffold0019 (1 HSPs)
scaffold0019 (158-223)||(24118-24183)
[»] scaffold1695 (1 HSPs)
scaffold1695 (21-57)||(458-494)
[»] scaffold1283 (1 HSPs)
scaffold1283 (158-222)||(456-520)
[»] scaffold0145 (1 HSPs)
scaffold0145 (119-162)||(8085-8129)
[»] scaffold0120 (1 HSPs)
scaffold0120 (119-162)||(29272-29316)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-41)||(28338-28378)


Alignment Details
Target: chr5 (Bit Score: 167; Significance: 2e-89; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 6551499 - 6551289
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaacatcgacgacaacaacggcaaccatgttaaaccctattccataa 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  6551499 caagccctcaactttagataagtatgcatggactcaacaaccaacaactttaacaacatcgacgacaacagcggcaaccatgttaaaccctattccagaa 6551400  T
Q  101 ttataaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacac 200  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |  ||||||||||| || || |||    
T  6551399 ttataaacctaattcctataacatcaaatctaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtctcac 6551300  T
Q  201 ccttaccttag 211  Q
    |||||||||||    
T  6551299 ccttaccttag 6551289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 76 - 211
Target Start/End: Original strand, 16063669 - 16063804
Alignment:
Q  76 aaccatgttaaaccctattccataattataaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacc 175  Q
    ||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16063669 aaccacgttaaactctattccagaattataaacctaattcctataacatcaaaactaacaacaactacaaggttaaacccttttttagaattatacaacc 16063768  T
Q  176 cattattagagaaagctattcacacccttaccttag 211  Q
    ||||||||||||||| || || ||||||||||||||    
T  16063769 cattattagagaaaggtagtcccacccttaccttag 16063804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 111 - 248
Target Start/End: Original strand, 660743 - 660878
Alignment:
Q  111 aattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctta 210  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| || | |||||||||||    
T  660743 aatttctataacatcaaaactaacaacaactacaaggttaaacc-tttttcagaattatacaaccccttattagagaaagctagtccc-cccttacctta 660840  T
Q  211 ggttagatgatcgcaaggtcctaccgctttctcttctc 248  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  660841 ggttagatgatcgcaaggttctaccgctttctcttctc 660878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 18744824 - 18744927
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||    
T  18744824 cctaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagttagtcccacccttacc 18744923  T
Q  208 ttag 211  Q
    ||||    
T  18744924 ttag 18744927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 23199309 - 23199194
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  23199309 cctaatttctataacatcaaaactactaacaactacaaggttaaaccatttttcagaattatacaacccattattagagaaagctagtcccacccttacc 23199210  T
Q  208 ttaggttagatgatcg 223  Q
    |||  |||||||||||    
T  23199209 ttaaattagatgatcg 23199194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 1627170 - 1627071
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccct-ttttcagaattatacaacccattattagagaaagctattcacacccttac 206  Q
    ||||||| ||||||||||||||||||||| || ||||||| |||||||| |||| ||||||||||||| |||||||||||||||||| || |||||||||    
T  1627170 cctaatttctataacatcaaaactaacaataaatacaagggtaaaccctttttttagaattatacaactcattattagagaaagctagtcccacccttac 1627071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 32607418 - 32607303
Alignment:
Q  109 ctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 206  Q
    |||||| ||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || |||||||||    
T  32607418 ctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttac 32607320  T
Q  207 cttaggttagatgatcg 223  Q
    ||||| |||||| ||||    
T  32607319 cttagattagataatcg 32607303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 1626992 - 1626881
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    ||||||||||||||||||||||||||||| |||| | | |  || |||| |||| | || |||||||||||||||||||||||| |||||||||| ||||    
T  1626992 aacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcacacccttaccttaggttagataatcgcaaggttctac 1626894  T
Q  235 cgctttctcttct 247  Q
    |||||||||||||    
T  1626893 cgctttctcttct 1626881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 21398748 - 21398631
Alignment:
Q  108 cctaattcctataacatcaaaactaacaa--caactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| |||||||||||||||||||||  |||  ||| | | || ||| |||| ||||| |||||||||||||||||||||||||| || ||||||||    
T  21398748 cctaatttctataacatcaaaactaacaaaacaaaaacatgttaaaccccctttttagaatcatacaacccattattagagaaagctaatcccaccctta 21398649  T
Q  206 ccttaggttagatgatcg 223  Q
    |||||| |||||||||||    
T  21398648 ccttagattagatgatcg 21398631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 249
Target Start/End: Original strand, 26750009 - 26750122
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    ||||||||||||||||||||| ||||||| |||||| | |  || |||| | || | || || |||||||||||||||||||||||||||||||| ||||    
T  26750009 aacaactacaaggttaaaccccttttcaggattatata-cttatgattaaaaaaggttagtctcacccttaccttaggttagatgatcgcaaggttctac 26750107  T
Q  235 cgctttctcttctct 249  Q
    |||||||||||||||    
T  26750108 cgctttctcttctct 26750122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 14025881 - 14025770
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    ||||||||||||||||||||||||||||| |||| | | |  || |||| |||| | || || |||||||||||||| ||||||||||||||||| ||||    
T  14025881 aacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccacccttaccttagattagatgatcgcaaggttctac 14025783  T
Q  235 cgctttctcttct 247  Q
    |||||||| ||||    
T  14025782 cgctttcttttct 14025770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8504734 - 8504679
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  8504734 caagccctcaacttta-atgagtatgcatggactcagcaaccaacaactttaacaac 8504679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 8833280 - 8833166
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    |||||||| |||||||||||||||||||| |||| | | |  || |||| |||| |  | || |||||||||| ||||||||||||||||||||| ||||    
T  8833280 aacaactataaggttaaaccctttttcaggattacata-cttatgattaaagaaggtcagtcccacccttaccctaggttagatgatcgcaaggttctac 8833182  T
Q  235 cgctttctcttctctg 250  Q
     |||||||||||||||    
T  8833181 agctttctcttctctg 8833166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26761491 - 26761555
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaacatcgacgac 66  Q
    |||||||||||||||| || ||||||||||||||||| ||||||||||||||||||| | ||||||    
T  26761491 caagccctcaacttta-atgagtatgcatggactcagaaaccaacaactttaacaacttagacgac 26761555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14026901 - 14026850
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaa 53  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  14026901 caagccctcaacttta-atgagtatgcatggactcagcaaccaacaactttaa 14026850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20198745 - 20198690
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  20198745 caagccctcaacttta-atgagtatgcaaggactcagcaaccaacaactttaacaac 20198690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26749052 - 26749107
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || | |||||||||||||||||||||||||||||||||||    
T  26749052 caagccctcaacttta-atgattatgcatggactcagcaaccaacaactttaacaac 26749107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 21504090 - 21504147
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaa 165  Q
    ||||||| |||||||||||||||||  |||||||||||  ||||||||||||||||||    
T  21504090 cctaatttctataacatcaaaactactaacaactacaaacttaaaccctttttcagaa 21504147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 20313251 - 20313328
Alignment:
Q  132 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    ||||||||| || | |||||||||| ||||||||||||| |||||| |||||||| |||||| || ||||||||||||||    
T  20313251 aacaacaacaaccatgttaaaccctatttcagaattata-aacccactattagag-aagctagtcccacccttaccttag 20313328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 8834168 - 8834123
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||| | || ||||||||||||||||||||||||||||||    
T  8834168 ccctcaacttaatatgagtatgcatggactcagcaaccaacaactt 8834123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29914352 - 29914400
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||||    
T  29914352 caagccctcaacttta-atgagtatgcatggacttagcaaccaacaactt 29914400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 31622117 - 31622178
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatg 219  Q
    |||||||||||||||||| |  ||||||||||| || || |||||||||||||| |||||||    
T  31622117 tttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttagattagatg 31622178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 21300096 - 21300032
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 222  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| ||||||||||    
T  21300096 tttcagaattatacaacttaaaattagagaaagttagtcccacccttaccttagattagatgatc 21300032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 21398894 - 21398833
Alignment:
Q  116 ctataacatcaaaactaacaacaactac----aaggttaaaccc-tttttcagaattataca 172  Q
    ||||||||||||||||||||||||| ||    |||||||||||| |||||||||||||||||    
T  21398894 ctataacatcaaaactaacaacaacaacaacaaaggttaaacccttttttcagaattataca 21398833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 21619011 - 21618960
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||| || |||||||||||||||| ||||||||||||| ||||||    
T  21619011 ccctcaacttta-atgagtatgcatggactcaacaaccaacaacttaaacaac 21618960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20470117 - 20470069
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||| | || |||||||||||||||||||||| |||||||    
T  20470117 caagccctcaacttaa-atgagtatgcatggactcagcaacctacaactt 20470069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 24068173 - 24068234
Alignment:
Q  102 tataaacctaattcctataacatcaaaac-taacaacaactacaaggttaaaccctttttca 162  Q
    ||||| ||||||  || |||||||||||| ||  ||||||||||||||||||||||||||||    
T  24068173 tataaccctaatctctttaacatcaaaacctattaacaactacaaggttaaaccctttttca 24068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 168
Target Start/End: Original strand, 26762380 - 26762413
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaatta 168  Q
    ||||||||||||||||||||||||||||| ||||    
T  26762380 aacaactacaaggttaaaccctttttcaggatta 26762413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 1628502 - 1628451
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||| || ||||||||  |||||| ||||||||||||||||||||    
T  1628502 ccctcaacttta-atgagtatgcaatgactcatcaaccaacaactttaacaac 1628451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 3e-78; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 75 - 250
Target Start/End: Complemental strand, 36732547 - 36732372
Alignment:
Q  75 caaccatgttaaaccctattccataattataaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaac 174  Q
    ||||||||||||||||| ||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36732547 caaccatgttaaacccttttttagaattataaacctaattcctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaac 36732448  T
Q  175 ccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36732447 ccattattagagaaagctagtcacacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctg 36732372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 108 - 248
Target Start/End: Original strand, 21514641 - 21514781
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| || ||||||||||    
T  21514641 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttaagaattatacaactcattattagagaaatctagtcccacccttacc 21514740  T
Q  208 ttaggttagatgatcgcaaggtcctaccgctttctcttctc 248  Q
    ||| |||||||||||||||||| ||||||||||||||||||    
T  21514741 ttaagttagatgatcgcaaggttctaccgctttctcttctc 21514781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 108 - 248
Target Start/End: Complemental strand, 4380719 - 4380579
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |  ||||||||||| || || ||||||||||    
T  4380719 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttacc 4380620  T
Q  208 ttaggttagatgatcgcaaggtcctaccgctttctcttctc 248  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  4380619 ttaggttagatgatcgcaaggttctacggctttctcttctc 4380579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 18816397 - 18816295
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||    
T  18816397 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccatttttagagaaagctagtcccacccttacc 18816298  T
Q  208 tta 210  Q
    |||    
T  18816297 tta 18816295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 22208246 - 22208334
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||    
T  22208246 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattagatgatcg 22208334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 223
Target Start/End: Complemental strand, 22258411 - 22258293
Alignment:
Q  105 aaacctaattcctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 203  Q
    ||||||||||| || ||||||||||| || |||||||| ||||||||||||||||||  |||||||||||| |||||||||||||||||| || ||||||    
T  22258411 aaacctaattc-tacaacatcaaaacctatcaacaactgcaaggttaaacccttttttggaattatacaactcattattagagaaagctagtctcaccct 22258313  T
Q  204 taccttaggttagatgatcg 223  Q
    |||||||  |||||||||||    
T  22258312 taccttaaattagatgatcg 22258293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 211
Target Start/End: Complemental strand, 21676697 - 21676592
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 203  Q
    ||||||||||| |||||| |||||||||| |||||||||||| |||||||||| ||||| ||||||| ||||||||||||||| |||||| || ||||||    
T  21676697 taaacctaatttctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattagag-aagctagtcccaccct 21676600  T
Q  204 taccttag 211  Q
    ||||||||    
T  21676599 taccttag 21676592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 21678949 - 21678845
Alignment:
Q  105 aaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 204  Q
    |||||||||| |||||| |||||||||| |||||||||||| |||||||||| ||||| ||||||| ||||||||||||||| |||||| || |||||||    
T  21678949 aaacctaattgctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattagag-aagctagtcccaccctt 21678852  T
Q  205 accttag 211  Q
    |||||||    
T  21678851 accttag 21678845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 12577837 - 12577932
Alignment:
Q  116 ctataacatcaaaactaacaacaacta-caaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| | |||||||||||||| || || ||||||||||||||    
T  12577837 ctataacatcaaaactaacaacaactataaaggttaaaccctttttcggaattatacaa-ctattattagagaaagttagtcccacccttaccttag 12577932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 21399666 - 21399770
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || ||||||||    
T  21399666 cctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctta 21399764  T
Q  206 ccttag 211  Q
    ||||||    
T  21399765 ccttag 21399770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 21794159 - 21794263
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || ||||||||    
T  21794159 cctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctta 21794257  T
Q  206 ccttag 211  Q
    ||||||    
T  21794258 ccttag 21794263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 18834375 - 18834487
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| ||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| |||||| ||||||||||||||||||| || ||||||||||    
T  18834375 cctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttt-agaatcatacaatccattattagagaaagctagtcccacccttacc 18834471  T
Q  208 ttaggttagatgatcg 223  Q
    |||  |||||||||||    
T  18834472 ttaaattagatgatcg 18834487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 22483775 - 22483834
Alignment:
Q  147 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  22483775 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttac 22483834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 250
Target Start/End: Original strand, 5761555 - 5761625
Alignment:
Q  180 attagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    ||||||||||| || || |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  5761555 attagagaaagttagtcccacccttaccttaggttagatgatcgcaaggttctaccgttttctcttctctg 5761625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 22345153 - 22345227
Alignment:
Q  147 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  22345153 gttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttagattagatgat 22345227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 22356813 - 22356887
Alignment:
Q  147 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  22356813 gttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttagattagatgat 22356887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 21676585 - 21676499
Alignment:
Q  123 atcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    |||||||||| |||||||||||| |||||||||| ||||| ||||||| ||||||||||||||| |||||| || ||||||||||||||    
T  21676585 atcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattagag-aagctagtcccacccttaccttag 21676499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 17978490 - 17978376
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    |||||||||||||||||| |||||||||| |||| | | |  || |||| ||||   || || |||||||||||||| ||||||||||||||||| ||||    
T  17978490 aacaactacaaggttaaatcctttttcaggattacata-cttatgattatagaagtttagtcccacccttaccttagtttagatgatcgcaaggttctac 17978392  T
Q  235 cgctttctcttctctg 250  Q
    ||||||||||||||||    
T  17978391 cgctttctcttctctg 17978376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 18023632 - 18023573
Alignment:
Q  134 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 193  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  18023632 caacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagcta 18023573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18815960 - 18815905
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaa 56  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  18815960 caagccctcaactttagatgagtatgcatgaactcagcaaccaacaactttaacaa 18815905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36733615 - 36733560
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  36733615 caagccctcaacttta-atgagtatgcatggactcagcaaccaacaactttaacaac 36733560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 18819876 - 18819825
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaa 56  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  18819876 ccctcaactttagatgagtatgcatggactcaggaaccaacaactttaacaa 18819825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 36305988 - 36306062
Alignment:
Q  148 ttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    ||||| ||||||||||||| ||||||||  |||||||||||||||| || |||||||||||||| |||||||||||    
T  36305988 ttaaaacctttttcagaatcatacaaccg-ttattagagaaagctagtctcacccttaccttagattagatgatcg 36306062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 38184984 - 38184929
Alignment:
Q  138 aactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 193  Q
    |||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  38184984 aactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagcta 38184929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 22610365 - 22610266
Alignment:
Q  110 taattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctt 209  Q
    ||||| ||||||||||||||||||||| |  ||  | ||||||||| |||| ||||| ||||||| ||||||||||||||| || || ||||||||||||    
T  22610365 taatttctataacatcaaaactaacaaaa--taacatgttaaacccctttttagaatcatacaactcattattagagaaagttagtcccacccttacctt 22610268  T

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Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 36406009 - 36405948
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaacatcgac 63  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| |||||    
T  36406009 caagcccccaacttta-attagtatgcatggactcagcaaccaacaactttaacaacttcgac 36405948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4381770 - 4381714
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||| ||||||| || |||||| ||||||||||||||||||||||||||||||    
T  4381770 caagcccttaactttaaatgagtatggatggactcagcaaccaacaactttaacaac 4381714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21513363 - 21513418
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  21513363 caagccctcaacttta-atgagtatgcaaggactcagcaaccaacaactttaacaac 21513418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22318917 - 22318862
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||||||| ||||||||||||||||||||    
T  22318917 caagccctcaacttta-atgagtatgcatggactcatcaaccaacaactttaacaac 22318862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 22474734 - 22474845
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    ||||||||||||||||||||||||||||| |||| |  ||  || |||| |||| | || || |||||||||||||| ||   |||||||||||| ||||    
T  22474734 aacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccacccttaccttagattgattgatcgcaaggttctac 22474832  T
Q  235 cgctttctcttct 247  Q
    |||||||||||||    
T  22474833 cgctttctcttct 22474845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 23884120 - 23884231
Alignment:
Q  108 cctaattcctataacatcaaaactaacaaca--actacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| |  || ||| | |||||||| |||| ||||| ||||||||||||  |||||||||||| || | ||||||    
T  23884120 cctaatttctataacatcaaaactaacaaaagaacaacatg-ttaaacccctttttagaatcatacaacccatt--tagagaaagctagtcccgccctta 23884216  T
Q  206 ccttaggttagatga 220  Q
    |||||| ||||||||    
T  23884217 ccttagattagatga 23884231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 22483912 - 22483970
Alignment:
Q  132 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaag 190  Q
    ||||||||| || | |||||||||||||| ||||||||||||| |||||||||||||||    
T  22483912 aacaacaacaaccatgttaaaccctttttaagaattatacaactcattattagagaaag 22483970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 6574017 - 6573965
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||| | || |||||||||||||||||||||||||||||| ||||||    
T  6574017 ccctcaacttaatatgagtatgcatggactcagcaaccaacaacttaaacaac 6573965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17979491 - 17979436
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||| ||||||| ||||||||||||||||||||    
T  17979491 caagccctcaacttta-atgagtatgcaaggactcatcaaccaacaactttaacaac 17979436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 22473608 - 22473659
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||| || |||||||||||||||| ||||||||||||||||||||    
T  22473608 ccctcaacttta-atgagtatgcatggactcatcaaccaacaactttaacaac 22473659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 38988415 - 38988478
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaacatcgacgacaac 69  Q
    |||||||||||| || |||||||||||||||| | ||||||||||||||| |||||||| |||||    
T  38988415 ccctcaacttta-atgagtatgcatggactcaactaccaacaactttaacgacatcgacaacaac 38988478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 39019512 - 39019575
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaacatcgacgacaac 69  Q
    |||||||||||| || |||||||||||||||| | ||||||||||||||| |||||||| |||||    
T  39019512 ccctcaacttta-atgagtatgcatggactcaactaccaacaactttaacgacatcgacaacaac 39019575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 45471460 - 45471405
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||| | || |||||||||||||||||||||||||||||| ||||||    
T  45471460 caagccctcaacttaa-atgagtatgcatggactcagcaaccaacaacttaaacaac 45471405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23947259 - 23947308
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || |||||||||||||||||||||  |||||||    
T  23947259 caagccctcaactttaaatgagtatgcatggactcagcaacttacaactt 23947308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 31723787 - 31723743
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||| || ||||||||||||||||||||||||||||||    
T  31723787 ccctcaacttta-atgagtatgcatggactcagcaaccaacaactt 31723743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 20022093 - 20021994
Alignment:
Q  157 ttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgcttctc 256  Q
    ||||||||||||||| ||  |  ||||||||||| || || |||||||||||||| ||||||||||| ||| | |||| |  |||||||||||| |||||    
T  20022093 ttttcagaattataccacttagaattagagaaagttagtcccacccttaccttagattagatgatcggaagattctacag-gttctcttctctggttctc 20021995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 20025280 - 20025229
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||| || ||||||||||||||||||||| |||||||| ||||||    
T  20025280 ccctcaacttta-atgagtatgcatggactcagcaacaaacaacttaaacaac 20025229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 21579280 - 21579193
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    ||||||||||||||||||||||||||||| |||| |  ||  || |||| |||| | || ||||||||||||||||  |||||||||||    
T  21579280 aacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcacacccttaccttaaattagatgatcg 21579193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 22207292 - 22207344
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||| | || |||||||||||||||| ||||||||||||| ||||||    
T  22207292 ccctcaacttaatatgagtatgcatggactcaacaaccaacaacttaaacaac 22207344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 39694329 - 39694271
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttag 216  Q
    ||||||||| |||||||  || |||||||||||||| |||| ||||||| |||||||||    
T  39694329 tttcagaatcatacaacttataattagagaaagctagtcacgcccttacattaggttag 39694271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 12037238 - 12037205
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaatta 168  Q
    ||||||||||||||||||||||||||||| ||||    
T  12037238 aacaactacaaggttaaaccctttttcaggatta 12037205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20084621 - 20084572
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || | |||||||||||||||||||  |||||||    
T  20084621 caagccctcaactttaaatgaatatgcatggactcagcaacttacaactt 20084572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 22966754 - 22966815
Alignment:
Q  102 tataaacctaattcctataacatcaaaac-taacaacaactacaaggttaaaccctttttca 162  Q
    ||||| ||||||  || |||||||||||| ||  ||||||||||||||||||||||||||||    
T  22966754 tataaccctaatcgctttaacatcaaaacctattaacaactacaaggttaaaccctttttca 22966815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23888785 - 23888833
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || |||||||||||||||||||||  |||||||    
T  23888785 caagccctcaacttta-atgagtatgcatggactcagcaacttacaactt 23888833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 23889799 - 23889856
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 215  Q
    |||||||||||||||||| |  ||||||||||| || || |||||||| |||||||||    
T  23889799 tttcagaattatacaacctagaattagagaaagttaatctcacccttagcttaggtta 23889856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 29762942 - 29762909
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaatta 168  Q
    ||||||||||||||||||||||||||||| ||||    
T  29762942 aacaactacaaggttaaaccctttttcaggatta 29762909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 36728312 - 36728268
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||| || ||||||||| ||||||||||||||||||||    
T  36728312 ccctcaacttta-atgagtatgcatcgactcagcaaccaacaactt 36728268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 22317923 - 22317871
Alignment:
Q  198 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    |||||||||||||| ||   |||||||||||| |||||||||||||| |||||    
T  22317923 cacccttaccttagattgattgatcgcaaggttctaccgctttctctcctctg 22317871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 250
Target Start/End: Complemental strand, 22532184 - 22532092
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    ||||||||| |||||||  |  ||||||||||| || || |||||||||||||| ||   ||||||| |||| ||| || |||||||||||||    
T  22532184 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgattgatcgcgaggttctatcgttttctcttctctg 22532092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 250
Target Start/End: Complemental strand, 22536869 - 22536777
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    ||||||||| |||||||  |  ||||||||||| || || |||||||||||||| ||   ||||||| |||| ||| || |||||||||||||    
T  22536869 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgattgatcgcgaggttctatcgttttctcttctctg 22536777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 39695522 - 39695466
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||| | || |||||||||||||||| ||||  ||||||| ||||||    
T  39695522 caagccctcaacttcaaatgagtatgcatggactcaacaacgtacaacttaaacaac 39695466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 39695607 - 39695551
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||| | || |||||||||||||||| ||||  ||||||| ||||||    
T  39695607 caagccctcaacttcaaatgagtatgcatggactcaacaacgtacaacttaaacaac 39695551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 108 - 250
Target Start/End: Original strand, 18225 - 18367
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18225 cctaatttctataaaatcaaaaccaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcacacccttacc 18324  T
Q  208 ttaggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  18325 ttaggttagatgatcgcaaggttctaccgctttctcttctctg 18367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 66081 - 66129
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||||    
T  66081 caagccctcaacttaa-atgagtatgcatggactcagcaaccaacaactt 66129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 109 - 250
Target Start/End: Original strand, 43745607 - 43745748
Alignment:
Q  109 ctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacct 208  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || |||||||||||    
T  43745607 ctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtcccacccttacct 43745706  T
Q  209 taggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  43745707 taggttagatgatcgcaaggttctaccgctttctcttctctg 43745748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 19195532 - 19195676
Alignment:
Q  79 catgttaaaccc-tattccataattataaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaaccca 177  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  19195532 catgttaaacccctattccagaattataaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccc-ttttcagaattatacaactca 19195630  T
Q  178 ttattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||| || |||||||||||||| |||||||||||    
T  19195631 ttattagagaaagctagtcccacccttaccttagattagatgatcg 19195676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 108 - 250
Target Start/End: Complemental strand, 48212831 - 48212687
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccc--tttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| |||||||||||||||||||||||| ||||| |||||||||  ||||| ||||| |||||||| |||||| |||||||||| |||||||||||    
T  48212831 cctaatttctataacatcaaaactaacaacaattacaatgttaaacccctttttttagaatcatacaacctattattggagaaagctagtcacaccctta 48212732  T
Q  206 ccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  48212731 ccttaggttagatgatcgcaaggttctaccactttctcttctctg 48212687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 104 - 211
Target Start/End: Complemental strand, 708535 - 708428
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 203  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||     
T  708535 taaacctaattcctataacatcaaaactaacagcaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccc 708436  T
Q  204 taccttag 211  Q
    ||||||||    
T  708435 taccttag 708428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 108 - 250
Target Start/End: Complemental strand, 4690765 - 4690623
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||  |  ||||||||||| || || |||| |||||    
T  4690765 cctaatttctataacatcaaaagtaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacctttacc 4690666  T
Q  208 ttaggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    |||||||||||||||||||||| ||| ||||||||||||||||    
T  4690665 ttaggttagatgatcgcaaggttctatcgctttctcttctctg 4690623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 15575751 - 15575648
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||    
T  15575751 cctaatttctataacatcaaaactaacaacaagtacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccctacc 15575652  T
Q  208 ttag 211  Q
    ||||    
T  15575651 ttag 15575648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 47095402 - 47095505
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  47095402 cctaatttctataacatcaaacctaacaacaactacaaggttaaaccatttttcagaattattcaacccattattagagaaagctagtcccacccttacc 47095501  T
Q  208 ttag 211  Q
    ||||    
T  47095502 ttag 47095505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 20252284 - 20252181
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||  |||||||||    
T  20252284 cctaatttctataacattaaaactaataacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcctacccttacc 20252185  T
Q  208 ttag 211  Q
    ||||    
T  20252184 ttag 20252181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 8513828 - 8513748
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 215  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  8513828 aacaactacaaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttaggtta 8513748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 18874766 - 18874664
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccc--tttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||| ||||   |||||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||    
T  18874766 cctaatttctataacatcaaaactaccaac---tacaaggttaaaccccttttttcagaattatacaacccattattagagaaagctagtctcaccctta 18874670  T
Q  206 ccttag 211  Q
    ||||||    
T  18874669 ccttag 18874664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 38299738 - 38299811
Alignment:
Q  148 ttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  38299738 ttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattagatgat 38299811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 8488169 - 8488089
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 215  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  8488169 aacaactataaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttaggtta 8488089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 58513 - 58400
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| || |||||||||||||||||| ||| ||| | |||||||| |||| ||||| |||||||||||||||||||||||||| || ||||||||||    
T  58513 cctaatttctttaacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacc 58416  T
Q  208 ttaggttagatgatcg 223  Q
    |||| |||||||||||    
T  58415 ttagattagatgatcg 58400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15576959 - 15576883
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaacatcgacgacaacaacggcaac 78  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  15576959 caagccctcaacttta-atgagtatgcatggactcagcaaccaacaactttaacaacattgacgacaacagcggcaac 15576883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 43276818 - 43276731
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| || || |||||||||||||  |||||||||||    
T  43276818 aacaactacaaggttaaaccatttt-cagaattatacaacccattattagagaaagttagtcccacccttaccttaaattagatgatcg 43276731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 221
Target Start/End: Complemental strand, 15700836 - 15700724
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| ||||||||| ||||||||||||||||||| | |||||||| |||| ||||  |||||||||||||||||||||||||| |  || |||||||    
T  15700836 cctaatttctataacattaaaactaacaacaactacatg-ttaaacccctttttagaaccatacaacccattattagagaaagctagtatcatccttacc 15700738  T
Q  208 ttaggttagatgat 221  Q
    |||| ||| |||||    
T  15700737 ttagattatatgat 15700724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 221
Target Start/End: Complemental strand, 8930868 - 8930754
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| ||||||||||||||||||||||  || || ||||||||    
T  8930868 cctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaatgtagtcccaccctta 8930770  T
Q  206 ccttaggttagatgat 221  Q
    |||||| |||||||||    
T  8930769 ccttagattagatgat 8930754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9744127 - 9744071
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9744127 caagccctcaactttagatgagtatgcatggactcagcaaccaacaactttaacaac 9744071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 221
Target Start/End: Original strand, 25943217 - 25943330
Alignment:
Q  108 cctaattcctataacatcaaaacta-acaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 206  Q
    ||||||| ||||||||||||||||| | |||||| | || ||||||||| |||||| ||  |||||||||||||||||||||||||| || |||||||||    
T  25943217 cctaatttctataacatcaaaactacaaaacaacga-aatgttaaaccccttttcaaaaacatacaacccattattagagaaagctagtcccacccttac 25943315  T
Q  207 cttaggttagatgat 221  Q
    ||||  |||||||||    
T  25943316 cttatattagatgat 25943330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 221
Target Start/End: Complemental strand, 13744610 - 13744499
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| ||||||||| |||| |||||| ||| ||| | |||||||| |||| ||||| ||| |||||||||||||||||||||| || ||||||||||    
T  13744610 cctaatttctataacattaaaaataacaa-aacaacatg-ttaaacccctttttagaatcataaaacccattattagagaaagctagtcccacccttacc 13744513  T
Q  208 ttaggttagatgat 221  Q
    |||| |||||||||    
T  13744512 ttagattagatgat 13744499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22001231 - 22001175
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  22001231 caagccctcaactttagatgagtatgcatggactcaggaaccaacaactttaacaac 22001175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 36300741 - 36300640
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||||||||| ||||||||||||||| |  ||  | ||||||||| |||| ||||| |||||||||||||||||||||||||| || |||| |||||    
T  36300741 cctaattcctatatcatcaaaactaacaaaa--taacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtctcacctttacc 36300644  T
Q  208 ttag 211  Q
    ||||    
T  36300643 ttag 36300640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 13315145 - 13315074
Alignment:
Q  147 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagat 218  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||    
T  13315145 gttaaaccccttttcagaatcatacaacccattattagagaaagatagtctcacccttaccttagattagat 13315074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 19283051 - 19283121
Alignment:
Q  153 ccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    ||||||||||||||||||||||||||| |||||||||| || || |||||||||||||  |||||||||||    
T  19283051 ccctttttcagaattatacaacccattcttagagaaagttagtctcacccttaccttaaattagatgatcg 19283121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 16186863 - 16186928
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaa 173  Q
    ||||||| |||||||||||||||||  |||||| | ||||||||||||||||||||||||||||||    
T  16186863 cctaatttctataacatcaaaactactaacaaccataaggttaaaccctttttcagaattatacaa 16186928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 16250285 - 16250221
Alignment:
Q  147 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| || || ||||||||||||||    
T  16250285 gttaaaccctttttcaaaattatacaactcattattagagaaagttagtcccacccttaccttag 16250221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 48213919 - 48213864
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  48213919 caagccctcaacttta-atgagtatgcatggactcagcaaccaacaactttaacaac 48213864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 15720730 - 15720831
Alignment:
Q  110 taattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||| ||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||| ||||||||||| || |||| |||||    
T  15720730 taatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattatgagagaaagctagtcccacctttacc 15720828  T
Q  208 tta 210  Q
    |||    
T  15720829 tta 15720831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 3287743 - 3287797
Alignment:
Q  157 ttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||    
T  3287743 ttttcagaattatacaacctattattagagaaagctagtctcacccttaccttag 3287797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 18570604 - 18570700
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    ||||||||||||||||||||| ||| ||||   ||||||||| |||  |||||  ||||||||||||||||||||||||| || ||||||||||||||    
T  18570604 ctataacatcaaaactaacaa-aacaacaatatgttaaacccctttctagaatcttacaacccattattagagaaagctagtctcacccttaccttag 18570700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 33556207 - 33556104
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||| ||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || ||||||||    
T  33556207 cctaatttctataacatcaaa-ctaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctta 33556110  T
Q  206 ccttag 211  Q
     |||||    
T  33556109 tcttag 33556104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 42565938 - 42565872
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    ||||||||| | |||||||| ||||| || ||||||||||||| |||||||||||||||||||||||    
T  42565938 taaacctaacttctataacaacaaaattatcaacaactacaagattaaaccctttttcagaattata 42565872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4691799 - 4691744
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  4691799 caagccctcaacttta-ataattatgcatggactcagcaaccaacaaatttaacaac 4691744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14153919 - 14153864
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || | |||||||||||||||||||||||||||||||||||    
T  14153919 caagccctcaacttta-atgattatgcatggactcagcaaccaacaactttaacaac 14153864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 34958321 - 34958380
Alignment:
Q  134 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 193  Q
    |||||||||||| |||||| ||||||||||||||||||||| |||  |||||||||||||    
T  34958321 caacaactacaatgttaaatcctttttcagaattatacaactcatctttagagaaagcta 34958380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19558300 - 19558245
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||||||| ||||||||||||| ||||||    
T  19558300 caagccctcaacttta-atgagtatgcatggactcaacaaccaacaacttaaacaac 19558245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 47094143 - 47094198
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||||||| ||||||||||||| ||||||    
T  47094143 caagccctcaacttta-atgagtatgcatggactcaacaaccaacaacttaaacaac 47094198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 831926 - 831871
Alignment:
Q  134 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaa 189  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||  |||||||||    
T  831926 caacaactacaatgttaaacccttttttagaattgtacaacccatctttagagaaa 831871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 1197106 - 1197051
Alignment:
Q  134 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaa 189  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||  |||||||||    
T  1197106 caacaactacaatgttaaacccttttttagaattgtacaacccatctttagagaaa 1197051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15120268 - 15120213
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaa 56  Q
    |||||||||||||| | || |||||||||||||| ||||||||||||||| |||||    
T  15120268 caagccctcaacttaatatgagtatgcatggacttagcaaccaacaacttaaacaa 15120213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 15139175 - 15139210
Alignment:
Q  21 agtatgcatggactcagcaaccaacaactttaacaa 56  Q
    ||||||||||||||||||||||||||||||||||||    
T  15139175 agtatgcatggactcagcaaccaacaactttaacaa 15139210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8136079 - 8136031
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  8136079 caagccctcaacttta-atgagtatgcatagactcagcaaccaacaactt 8136031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 12127215 - 12127150
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| |||||||||||    
T  12127215 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcg 12127150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14220040 - 14219991
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || |||||||||||||||||||||  |||||||    
T  14220040 caagccctcaactttaaatgagtatgcatggactcagcaacttacaactt 14219991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 44374843 - 44374908
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| |||||||||||    
T  44374843 tttcagaattatacaacttagaattagagaaagttactctcacccttaccttagattagatgatcg 44374908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 44383708 - 44383773
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| |||||||||||    
T  44383708 tttcagaattatacaacttagaattagagaaagttactctcacccttaccttagattagatgatcg 44383773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 15700951 - 15700887
Alignment:
Q  142 acaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 206  Q
    |||| ||||||||| |||| ||||| ||||||| |||||||||||||||||| || | |||||||    
T  15700951 acaatgttaaacccctttttagaatcatacaactcattattagagaaagctagtctcccccttac 15700887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 48809523 - 48809468
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||| | || ||||||| |||||||||||||||||||||| ||||||    
T  48809523 caagccctcaacttaa-atgagtatgcgtggactcagcaaccaacaacttaaacaac 48809468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 33001020 - 33001059
Alignment:
Q  2 aagccctcaactttagataagtatgcatggactcagcaac 41  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  33001020 aagccctcaactttatatgagtatgcatggactcagcaac 33001059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 8851211 - 8851146
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  8851211 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 8851146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 9743153 - 9743120
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaatta 168  Q
    ||||||||||||||||||||||||||||| ||||    
T  9743153 aacaactacaaggttaaaccctttttcaggatta 9743120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 11067468 - 11067533
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  11067468 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcg 11067533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 12372274 - 12372339
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  12372274 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 12372339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 12465312 - 12465247
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  12465312 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 12465247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 50
Target Start/End: Complemental strand, 13133511 - 13133482
Alignment:
Q  21 agtatgcatggactcagcaaccaacaactt 50  Q
    ||||||||||||||||||||||||||||||    
T  13133511 agtatgcatggactcagcaaccaacaactt 13133482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 250
Target Start/End: Complemental strand, 24269999 - 24269906
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac-cgctttctcttctctg 250  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| || | ||||  |||||| ||||  |||||||||||||||    
T  24269999 tttcagaattatacaacttaaaattagagaaagttaatcccacccttaccttagattggttgattacaaggttctacaagctttctcttctctg 24269906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 32433641 - 32433576
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  32433641 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcg 32433576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13746004 - 13745965
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaac 41  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  13746004 caagccctcaacttta-ataattatgcatggactcagcaac 13745965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 16077445 - 16077481
Alignment:
Q  21 agtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  16077445 agtatgcatggactcaacaaccaacaacttaaacaac 16077481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20253603 - 20253547
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    ||||| |||||||||  || ||||| |||||||||| ||||||||||||| ||||||    
T  20253603 caagctctcaacttttaatgagtattcatggactcaacaaccaacaacttaaacaac 20253547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 3e-57; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 110 - 250
Target Start/End: Complemental strand, 24719610 - 24719471
Alignment:
Q  110 taattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctt 209  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |    
T  24719610 taatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtc-cacccttaccat 24719512  T
Q  210 aggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  24719511 aggttagatgatcgcaaggttctaccgctttctcttctctg 24719471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 28476836 - 28476724
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| || ||||||||||    
T  28476836 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaactcattattagagaaatctagtcccacccttacc 28476737  T
Q  208 ttaggttagatga 220  Q
    |||| ||||||||    
T  28476736 ttagattagatga 28476724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 104 - 211
Target Start/End: Complemental strand, 38056778 - 38056671
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 203  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  38056778 taaacctaattcccaaaacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattactagagaaagctagtcccaccct 38056679  T
Q  204 taccttag 211  Q
    ||||||||    
T  38056678 taccttag 38056671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 110 - 221
Target Start/End: Original strand, 12710819 - 12710930
Alignment:
Q  110 taattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctt 209  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| || || | |||||||    
T  12710819 taatttctataacatcaaaactaacaacaactacaagattaaaccctttttcagaattatacaacccaatattagagaaagctagtcccatctttacctt 12710918  T
Q  210 aggttagatgat 221  Q
    || |||||||||    
T  12710919 agattagatgat 12710930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 8276095 - 8275987
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 203  Q
    ||||||||||||| | |||||||||| || |||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||| |||||||||    
T  8276095 taaacctaattcccaaaacatcaaaaatatcaacaactacaaggttaaaccctttttcagaattataccactcattattagataaagctagtcacaccct 8275996  T
Q  204 taccttagg 212  Q
    |||||||||    
T  8275995 taccttagg 8275987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 50544841 - 50544925
Alignment:
Q  127 aaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  50544841 aaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 50544925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 22145752 - 22145666
Alignment:
Q  124 tcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctta 210  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || || |||||||||||||    
T  22145752 tcaaacctaacaacaactacaaggttaaaccctttttcagaattaaacaacccattattagagaaagttagtcccacccttacctta 22145666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 24007319 - 24007212
Alignment:
Q  116 ctataacatcaaaactaacaacaactac-aaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtt 214  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||| ||||||||||| || ||||||||||||||  |    
T  24007319 ctataacatcaaaactaacaacaactacaaaggttaaaccttttttcagaattatacaa-tcattatcagagaaagctagtcccacccttaccttagtat 24007221  T
Q  215 agatgatcg 223  Q
    |||||||||    
T  24007220 agatgatcg 24007212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 8306555 - 8306671
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||   ||||||||| |||| |||||||||||||||||||||||||||||||| || ||| ||||    
T  8306555 cctaatttctataacatcaaaactaacaa-aacgacaacatgttaaacccctttttagaattatacaacccattattagagaaagctagtcccactctta 8306653  T
Q  206 ccttaggttagatgatcg 223  Q
    |||||| |||||||||||    
T  8306654 ccttagattagatgatcg 8306671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 14792637 - 14792523
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    ||||||||||||||||||||||||||||| |||| | | |  || |||| |||| | || || |||||||||||||||||||||||||||||||| ||||    
T  14792637 aacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccacccttaccttaggttagatgatcgcaaggttctac 14792539  T
Q  235 cgctttctcttctctg 250  Q
    ||||||||||||||||    
T  14792538 cgctttctcttctctg 14792523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 17901857 - 17901783
Alignment:
Q  147 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||  ||||||||    
T  17901857 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttagaatagatgat 17901783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 34392717 - 34392821
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  34392717 cctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcacaccctta 34392815  T
Q  206 ccttag 211  Q
    ||||||    
T  34392816 ccttag 34392821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 249
Target Start/End: Original strand, 18121581 - 18121694
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    |||||||||||||||||| |||||||||| |||| | | |  || |||| |||| | || || |||||||||||||||||||||||||||||||| ||||    
T  18121581 aacaactacaaggttaaatcctttttcaggattacata-cttatgattaaagaaggttaatcccacccttaccttaggttagatgatcgcaaggttctac 18121679  T
Q  235 cgctttctcttctct 249  Q
    |||||||||||||||    
T  18121680 cgctttctcttctct 18121694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 6834150 - 6834239
Alignment:
Q  132 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    ||||||||| || | |||||||||||||||||||||||||||| |||||||||||||||||| |  ||||||| ||||||  ||||||||    
T  6834150 aacaacaacaaccatgttaaaccctttttcagaattatacaactcattattagagaaagctagtatcacccttgccttagaatagatgat 6834239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 39061279 - 39061333
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  39061279 ctataacatcaaaactatcaacaactacaaggttaaaccttttttcagaattata 39061333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 635064 - 635003
Alignment:
Q  150 aaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| || ||||||||||||||    
T  635064 aaacccttttttagaattatacaacctattattagagaaagctagtctcacccttaccttag 635003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17904053 - 17904004
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17904053 caagccctcaactttagatgagtatgcatggactcagcaaccaacaactt 17904004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 20588585 - 20588703
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttc--agaattatacaacccattattagagaaagctattcacaccct 203  Q
    ||||||| ||||||||||||||||||||| ||| | ||   ||||||||||||||   ||||| |||||||||||||||||||||||||| || ||||||    
T  20588585 cctaatttctataacatcaaaactaacaa-aacaaaaacatgttaaacccttttttttagaatcatacaacccattattagagaaagctaatcccaccct 20588683  T
Q  204 taccttaggttagatgatcg 223  Q
    |||||||  || ||||||||    
T  20588684 taccttaaattggatgatcg 20588703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 20593123 - 20593241
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttc--agaattatacaacccattattagagaaagctattcacaccct 203  Q
    ||||||| ||||||||||||||||||||| ||| | ||   ||||||||||||||   ||||| |||||||||||||||||||||||||| || ||||||    
T  20593123 cctaatttctataacatcaaaactaacaa-aacaaaaacatgttaaacccttttttttagaatcatacaacccattattagagaaagctaatcccaccct 20593221  T
Q  204 taccttaggttagatgatcg 223  Q
    |||||||  || ||||||||    
T  20593222 taccttaaattggatgatcg 20593241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 44892427 - 44892539
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    |||||||||||||||||| |||||||||  |||| | | |  || |||| |||| | || || |||||||| ||||||||||||||||||||||| ||||    
T  44892427 aacaactacaaggttaaatcctttttcaagattacata-cttatgattaaagaaggttagtcccacccttaacttaggttagatgatcgcaaggttctac 44892525  T
Q  235 cgctttctcttctc 248  Q
    ||||||||||||||    
T  44892526 cgctttctcttctc 44892539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 221
Target Start/End: Original strand, 45499491 - 45499605
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||| | ||||||||||| ||| ||||   ||||||||| |||  ||||| |||||||||||||||||||||||||| || ||||||||    
T  45499491 cctaatttctataacgttaaaactaacaa-aacaacaacatgttaaacccctttatagaatcatacaacccattattagagaaagctagtctcaccctta 45499589  T
Q  206 ccttaggttagatgat 221  Q
    |||||| ||| |||||    
T  45499590 ccttagattatatgat 45499605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14793426 - 14793365
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaacatcgac 63  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||||||||| ||||||||    
T  14793426 caagcccccaacttta-atgagtatgcatggactcagcaaccaacaactttaacgacatcgac 14793365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 35895088 - 35895162
Alignment:
Q  147 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    |||||| ||||||||||||| |||||||||||||||||| ||||||| ||  |||| |||||||| |||||||||    
T  35895088 gttaaaacctttttcagaatcatacaacccattattagataaagctagtcctacccataccttagattagatgat 35895162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 38887161 - 38887049
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    |||||||||||| |||||||||||||||| |||| | | |  || |||| |||| | || |  ||||||||||||||||||||||||| |||| | ||||    
T  38887161 aacaactacaagattaaaccctttttcaggattacata-cttatgattaaagaaggttagtttcacccttaccttaggttagatgatcacaagtttctac 38887063  T
Q  235 cgctttctcttctc 248  Q
    ||||||||||||||    
T  38887062 cgctttctcttctc 38887049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18120618 - 18120673
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  18120618 caagccctcaacttta-atgagtatgcaaggactcagcaaccaacaactttaacaac 18120673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 24720793 - 24720742
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  24720793 ccctcaacttta-atgagtatgcatggactcagcaaccaacaactttaacaac 24720742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 51323376 - 51323431
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||| ||||||||||||||||||||||||    
T  51323376 caagccctcaacttta-atgagtatgcatggattcagcaaccaacaactttaacaac 51323431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 24723403 - 24723312
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctct 249  Q
    ||||||||| |||||||  |  ||||||||||| || || |||||||||||||| ||   |||||||||||| |||||||||||||||||||    
T  24723403 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgattgatcgcaaggttctaccgctttctcttctct 24723312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 255
Target Start/End: Original strand, 51324504 - 51324601
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgcttct 255  Q
    ||||||||| |||||||  |  ||||| ||||| || || |||||||||||||| ||   |||||||||||| |||||||||||||||||||| ||||    
T  51324504 tttcagaatcatacaacttagaattagggaaagttagtctcacccttaccttagattgattgatcgcaaggttctaccgctttctcttctctggttct 51324601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 21188139 - 21188073
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    ||||||||| | ||||||||||||||||| ||||||||||||  ||||| ||||| ||| |||||||    
T  21188139 taaacctaacttctataacatcaaaactatcaacaactacaaaattaaatcctttctcaaaattata 21188073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 7321930 - 7321879
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||| || ||||||||| ||||||||||| |||||||||||||||    
T  7321930 ccctcaacttta-atgagtatgcatcgactcagcaacaaacaactttaacaac 7321879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21240225 - 21240170
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||||||| |||||||||| || ||||||    
T  21240225 caagccctcaacttta-atgagtatgcatggactcaacaaccaacaaattaaacaac 21240170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 28477710 - 28477659
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||| || |||||||| ||||||| ||||||||||||||||||||    
T  28477710 ccctcaacttta-atgagtatgcaaggactcaacaaccaacaactttaacaac 28477659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 44891646 - 44891697
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||| || |||||||||||||||| ||||||| ||||||||||||    
T  44891646 ccctcaacttta-atgagtatgcatggactcaacaaccaaaaactttaacaac 44891697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 16401902 - 16401963
Alignment:
Q  147 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctta 210  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||| || || |||||||||||||    
T  16401902 gttaaaccctatttcagaattata-aacccattattagag-aagttagtcccacccttacctta 16401963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 16058366 - 16058301
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||  || || |||||||||||||| |||||||||||    
T  16058366 tttcagaattatacaacttagaattagagaaatttagtcccacccttaccttagattagatgatcg 16058301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 19676711 - 19676776
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  19676711 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 19676776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 21046101 - 21046036
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  21046101 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 21046036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 21243832 - 21243799
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaatta 168  Q
    ||||||||||||||||||||||||||||| ||||    
T  21243832 aacaactacaaggttaaaccctttttcaggatta 21243799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 40390094 - 40390155
Alignment:
Q  102 tataaacctaattcctataacatcaaaac-taacaacaactacaaggttaaaccctttttca 162  Q
    ||||| ||||||  || |||||||||||| ||  ||||||||||||||||||||||||||||    
T  40390094 tataaccctaatatctttaacatcaaaacctattaacaactacaaggttaaaccctttttca 40390155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 20708160 - 20708049
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| || |||||||| || || |||||||  ||| ||||| |||||||||||||||||| ||| || | ||| |||| | || || ||||||||||    
T  20708160 cctaatttctttaacatcacaattatcaacaacatcaaagttaacccctttttcagaattatagaactca-tgttaaagaaggttagtcccacccttacc 20708062  T
Q  208 ttaggttagatga 220  Q
    |||| || |||||    
T  20708061 ttagattggatga 20708049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 4e-56; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 116 - 250
Target Start/End: Complemental strand, 21683168 - 21683035
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 215  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  21683168 ctataacatcaaaacta-caacaactacaaggttaaaccctttttctgaattatacaacccattattagagaaagctagtcccacccttaccttaggtta 21683070  T
Q  216 gatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    ||||||||||||||||||| |||||||||||||||    
T  21683069 gatgatcgcaaggtcctacagctttctcttctctg 21683035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 75 - 221
Target Start/End: Complemental strand, 34140589 - 34140445
Alignment:
Q  75 caaccatgttaaaccctattccataattataaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaac 174  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||   ||||| ||||||| |||    
T  34140589 caaccatgttaaaccctattccagaattataaacttaattcctataacatcaaaactaacaacaactacaagattaaaccagatttcaaaattata-aac 34140491  T
Q  175 ccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    |||||||||||| |||||| || |||||||||||||| |||||||||    
T  34140490 ccattattagag-aagctagtcccacccttaccttagattagatgat 34140445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 75 - 221
Target Start/End: Complemental strand, 34153205 - 34153061
Alignment:
Q  75 caaccatgttaaaccctattccataattataaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaac 174  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |   ||||| ||||||| |||    
T  34153205 caaccatgttaaaccctattccagaattataaacttaattcctataacatcaaaactaacaacaactacaagattaaaacagatttcaaaattata-aac 34153107  T
Q  175 ccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    |||||||||||| |||||| || |||||||||||||| |||||||||    
T  34153106 ccattattagag-aagctagtcccacccttaccttagattagatgat 34153061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 19825576 - 19825473
Alignment:
Q  120 aacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatg 219  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||| |||||||    
T  19825576 aacatcaaaactaacaacaactacaaggttaaaacctttttcagaattatgcaacccattattagagaaagctagtctcacccttaccttagattagatg 19825477  T
Q  220 atcg 223  Q
    ||||    
T  19825476 atcg 19825473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 20410600 - 20410497
Alignment:
Q  122 catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||  |||||||||    
T  20410600 catcaaaactaataacaactacaaggttaaatcctttttcagaattatacaacccattattagagaaagctatttccacccttaccttaaattagatgat 20410501  T
Q  222 cgca 225  Q
    ||||    
T  20410500 cgca 20410497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 108 - 212
Target Start/End: Original strand, 15998839 - 15998943
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |  ||||||||||| || || ||||||||||    
T  15998839 cctaatttctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacttagaattagagaaagttagtctcacccttacc 15998938  T
Q  208 ttagg 212  Q
    |||||    
T  15998939 ttagg 15998943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 211
Target Start/End: Original strand, 18982511 - 18982625
Alignment:
Q  98 taattataaacctaattcctataa-catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattc 196  Q
    ||||| ||| ||||||| || ||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||    
T  18982511 taattctaaccctaatttctctaatcatcaaacctagcaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatc 18982610  T
Q  197 acacccttaccttag 211  Q
     |||| |||||||||    
T  18982611 ccaccgttaccttag 18982625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 23658066 - 23658142
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||||    
T  23658066 aacaactacaaggttaaaccctttttcagaattatacaacctattattagggaaagctagtcccacccttaccttag 23658142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 221
Target Start/End: Original strand, 10446166 - 10446280
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| |||||||||| |||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || ||||||||    
T  10446166 cctaatttctataacatcgaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctta 10446264  T
Q  206 ccttaggttagatgat 221  Q
    |||||| |||||||||    
T  10446265 ccttagattagatgat 10446280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 7217333 - 7217204
Alignment:
Q  120 aacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatg 219  Q
    ||||||||| |||  ||||||||||||||||||||||||||||| |||| | | |  || |||| |||| | || || ||||||||||||||| ||||||    
T  7217333 aacatcaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtctcacccttaccttaggctagatg 7217235  T
Q  220 atcgcaaggtcctaccgctttctcttctctg 250  Q
    |||||||||| ||||||||||||||| ||||    
T  7217234 atcgcaaggttctaccgctttctcttttctg 7217204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 29045260 - 29045334
Alignment:
Q  147 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||  ||||||||    
T  29045260 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtctcacccttaccttagaatagatgat 29045334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 18455147 - 18455034
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    |||||||||||||||||| |||||||||| |||| | | |  || |||| |||| | || || ||||||||||||||||||||||||| |||||| ||||    
T  18455147 aacaactacaaggttaaaacctttttcaggattacata-cttatgattaaagaaggttactcccacccttaccttaggttagatgatcacaaggttctac 18455049  T
Q  235 cgctttctcttctct 249  Q
    |||||||||||||||    
T  18455048 cgctttctcttctct 18455034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 22557226 - 22557339
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    ||||||||||||||||||||||||||||| |||| | | |  || || | |||| | || || |||||||||||||||||||||||||||||||| ||||    
T  22557226 aacaactacaaggttaaaccctttttcaggattacata-cttatgataa-agaaggttactcccacccttaccttaggttagatgatcgcaaggttctac 22557323  T
Q  235 cgctttctcttctctg 250  Q
     |||||||||||||||    
T  22557324 tgctttctcttctctg 22557339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 24506221 - 24506155
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    ||||||||| | ||||||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  24506221 taaacctaacttctataacatcaaaactatcaacaactacaaaattaaaccctttttcagaattata 24506155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 1818903 - 1819005
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||| ||||  || ||| |||| |||| | || || ||||||||||    
T  1818903 cctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttacc 1819001  T
Q  208 ttag 211  Q
    ||||    
T  1819002 ttag 1819005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18458144 - 18458089
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    ||||||||||||| || || |||||||||||||||||||||||||||||||||||||    
T  18458144 caagccctcaactata-atgagtatgcatggactcagcaaccaacaactttaacaac 18458089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23500707 - 23500771
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaacatcgacgac 66  Q
    |||||||||||||||| || |||||||||||||||| ||||||||||||| |||||| | ||||||    
T  23500707 caagccctcaacttta-atgagtatgcatggactcaacaaccaacaacttaaacaacttagacgac 23500771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21680839 - 21680784
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    ||||||||||| |||| || |||||||| ||||||||||||||||||||||||||||    
T  21680839 caagccctcaaattta-atgagtatgcaaggactcagcaaccaacaactttaacaac 21680784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 22556254 - 22556305
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||| || |||||||||||||| ||||||||||||||||||||||    
T  22556254 ccctcaacttta-atgagtatgcatggacttagcaaccaacaactttaacaac 22556305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6083749 - 6083693
Alignment:
Q  1 caagccctcaactttagataagt-atgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || | | ||||||||||||||||||||||||||||||||||    
T  6083749 caagccctcaacttta-atgattaatgcatggactcagcaaccaacaactttaacaac 6083693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23492293 - 23492245
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || |||||||||| |||||||||||||||||||    
T  23492293 caagccctcaacttta-atgagtatgcatgaactcagcaaccaacaactt 23492245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23497891 - 23497843
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || |||||||||| |||||||||||||||||||    
T  23497891 caagccctcaacttta-atgagtatgcatgaactcagcaaccaacaactt 23497843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 25601429 - 25601371
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaatta 168  Q
    ||||||| ||||||||| |||||||||||| || |  ||||||||||||||||||||||||    
T  25601429 cctaatttctataacatgaaaactaacaactacaa--aggttaaaccctttttcagaatta 25601371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 19957932 - 19957896
Alignment:
Q  21 agtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||||||||||||||||| ||||||    
T  19957932 agtatgcatggactcagcaaccaacaacttaaacaac 19957896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 28947528 - 28947564
Alignment:
Q  21 agtatgcatggactcagcaaccaacaactttaacaac 57  Q
    ||||||||||||||||||||||| |||||||||||||    
T  28947528 agtatgcatggactcagcaaccatcaactttaacaac 28947564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 250
Target Start/End: Original strand, 28948575 - 28948667
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    ||||||||| |||||||  |  ||||||||||| || || |||||||||||||| ||   |||||||||||| ||| |||||||| |||||||    
T  28948575 tttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttagattgattgatcgcaaggttctatcgctttcttttctctg 28948667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 18982379 - 18982422
Alignment:
Q  122 catcaaaactaacaacaactacaaggttaaaccctttttcagaa 165  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||    
T  18982379 catcaaaactatcaacaactacaaaattaaaccctttttcagaa 18982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15895845 - 15895906
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaacatcgac 63  Q
    |||||||||||||| | || |||||||||||||||||||||  |||||||  |||||||||||    
T  15895845 caagccctcaacttga-atgagtatgcatggactcagcaacttacaacttggacaacatcgac 15895906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 7827972 - 7828037
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  7827972 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 7828037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 13285724 - 13285809
Alignment:
Q  134 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatg 219  Q
    ||||||| |||| | ||||||| |||||||||||||  ||| ||| |||| |||| | || || |||||||||||||| |||||||    
T  13285724 caacaacaacaatggtaaaccccttttcagaattatgaaactcatgattatagaaggttagtcccacccttaccttagattagatg 13285809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 250
Target Start/End: Original strand, 19235123 - 19235216
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac-cgctttctcttctctg 250  Q
    |||||||||||||||||| |  ||||||||||| || || |||||||| ||||| || | ||||  |||||| ||||  |||||||||||||||    
T  19235123 tttcagaattatacaacctaaaattagagaaagttaatcccacccttaacttagattggttgattacaaggttctacaagctttctcttctctg 19235216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 19655283 - 19655218
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  19655283 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcg 19655218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 23150339 - 23150274
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  23150339 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 23150274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 27330033 - 27329980
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    |||||||||||||||||| |  ||||||||||| || |||||| ||||||||||    
T  27330033 tttcagaattatacaacctagaattagagaaagttagtcacactcttaccttag 27329980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 27390773 - 27390720
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    |||||||||||||||||| |  ||||||||||| || |||||| ||||||||||    
T  27390773 tttcagaattatacaacctagaattagagaaagttagtcacactcttaccttag 27390720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 168
Target Start/End: Original strand, 31734685 - 31734718
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaatta 168  Q
    ||||||| ||||||||||||||||||||||||||    
T  31734685 aacaactgcaaggttaaaccctttttcagaatta 31734718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 108 - 250
Target Start/End: Original strand, 26446157 - 26446299
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||  ||||||||     
T  26446157 cctaatttctataacatcaaaactaacaacaactacaagattaaaccatttttcagaattatacaacccattattagagaaagctagtcctacccttact 26446256  T
Q  208 ttaggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  26446257 ttaggttagatgatcgcaaggttctaccgctctctcttctctg 26446299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 75 - 204
Target Start/End: Original strand, 35660873 - 35661002
Alignment:
Q  75 caaccatgttaaaccctattccataattataaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaac 174  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  35660873 caaccatgttaaaccctattccagaattataaacctaattcatataacatcaaaactaacaacaactacaaggttaaaccatttttcataattatacaac 35660972  T
Q  175 ccattattagagaaagctattcacaccctt 204  Q
    ||||||||||||||||||| || |||||||    
T  35660973 ccattattagagaaagctagtcccaccctt 35661002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 14631085 - 14631188
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  14631085 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttacc 14631184  T
Q  208 ttag 211  Q
    ||||    
T  14631185 ttag 14631188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 108 - 250
Target Start/End: Complemental strand, 2424489 - 2424347
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||  |  ||||||||||| || || ||||||||||    
T  2424489 cctaatttctataacatcaaaactaataacaactacaagattaaaccctttttcaaaattatacaacttagaattagagaaagttagtctcacccttacc 2424390  T
Q  208 ttaggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    |||||||||||||||||||||| ||| ||||||||||||||||    
T  2424389 ttaggttagatgatcgcaaggttctaacgctttctcttctctg 2424347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 25513801 - 25513915
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| || |||| |||||    
T  25513801 cctaatttctataacatcaaaactaacaacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcccaccattacc 25513900  T
Q  208 ttaggttagatgatc 222  Q
    |||| ||||||||||    
T  25513901 ttagattagatgatc 25513915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 99 - 211
Target Start/End: Original strand, 16296879 - 16296991
Alignment:
Q  99 aattataaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcac 198  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| || |    
T  16296879 aattaaaaacataattcatataacatcaaaactaacaacaactaccaggttaaaccctttttcagaattatacaactcattattagagaaagctagtccc 16296978  T
Q  199 acccttaccttag 211  Q
    |||||||||||||    
T  16296979 acccttaccttag 16296991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 104 - 223
Target Start/End: Original strand, 9638956 - 9639075
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 203  Q
    ||||||||||||| | |||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| || ||||||    
T  9638956 taaacctaattcccaaaacatcaaaattatcaacaactacaaggttaaaccctttttcagaattacacaactcattattagagaaagctagtcccaccct 9639055  T
Q  204 taccttaggttagatgatcg 223  Q
    |||||||| |||||| ||||    
T  9639056 taccttagattagattatcg 9639075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 33186880 - 33186968
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||  |||||||||||    
T  33186880 aacaaccacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccctaccttaaattagatgatcg 33186968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 12424367 - 12424277
Alignment:
Q  135 aacaactacaaggttaaacccttttt--cagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  12424367 aacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgatcg 12424277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 15239911 - 15239815
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaa-ggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    ||||||| ||||||| ||| ||||||| || ||||||||||||||||||| ||||||||  |||||||||||||||||| || ||||||||||||||    
T  15239911 ctataacctcaaaaccaacgacaactataaaggttaaaccctttttcagatttatacaattcattattagagaaagctagtctcacccttaccttag 15239815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 250
Target Start/End: Complemental strand, 26921603 - 26921469
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaag-gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtt 214  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||||||||| | | |  || ||||  ||| | || ||  ||||||||||||||||    
T  26921603 ctatgacatcaaaactaacaacaactacaaatgttaaaccctttttcagaattacata-cttatgattaatgaaggttagtcctacccttaccttaggtt 26921505  T
Q  215 agatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    |||||||| ||||||  |||||||||||||||||||    
T  26921504 agatgatcacaaggttataccgctttctcttctctg 26921469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 46741177 - 46741291
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    ||||||||||||||||||||||||||||| |||| | |    || |||| |||| | || || ||| |||||||||||||||||||||||||||| ||||    
T  46741177 aacaactacaaggttaaaccctttttcaggattacatattt-atgattaaagaaggttagtcccacacttaccttaggttagatgatcgcaaggttctac 46741275  T
Q  235 cgctttctcttctctg 250  Q
    ||||||||||||||||    
T  46741276 cgctttctcttctctg 46741291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 9622438 - 9622542
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| | |||||||||||||||||||||||| || ||||||||    
T  9622438 cctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcagacaacccattattagagaaagctagtcccaccctta 9622536  T
Q  206 ccttag 211  Q
    ||||||    
T  9622537 ccttag 9622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 55583145 - 55583249
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||   ||||||||| |||| | ||| |||||||||||||||||||||||||| || ||||||||    
T  55583145 cctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttataatcatacaacccattattagagaaagctagtcccaccctta 55583243  T
Q  206 ccttag 211  Q
    ||||||    
T  55583244 ccttag 55583249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 13847193 - 13847258
Alignment:
Q  150 aaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 215  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  13847193 aaaccattttttagaattatacaacccattattagagaaagctagtctcacccttaccttaggtta 13847258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35659740 - 35659796
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35659740 caagcccccaactttagatgagtatgcatggactcagcaaccaacaactttaacaac 35659796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 249
Target Start/End: Original strand, 12623294 - 12623407
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    ||||||||||||||||||||||||||||| |||| | | || || |||| |||| | || || |||||||||||||| ||   |||||||||||| ||||    
T  12623294 aacaactacaaggttaaaccctttttcaggattacata-cctatgattaaagaaggttagtcccacccttaccttagattgattgatcgcaaggttctac 12623392  T
Q  235 cgctttctcttctct 249  Q
    |||||||||||||||    
T  12623393 cgctttctcttctct 12623407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12622450 - 12622505
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  12622450 caagccctcaacttta-atgagtatgcatggactcagcaaccaacaactttaacaac 12622505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 10273372 - 10273442
Alignment:
Q  147 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttaga 217  Q
    |||| |||| |||| ||||| |||||||||||||||||||||||||| || |||||||||||||| |||||    
T  10273372 gttatacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattaga 10273442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 17142998 - 17143060
Alignment:
Q  134 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattc 196  Q
    |||||||||||| ||||||||| |||||||||||||||||| |||  ||||||||||||||||    
T  17142998 caacaactacaatgttaaaccccttttcagaattatacaactcatctttagagaaagctattc 17143060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 45314177 - 45314124
Alignment:
Q  116 ctataacatcaaaactaacaacaactac-aaggttaaaccctttttcagaatta 168  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  45314177 ctataacatcaaaactaacaacaactacaaatgttaaaccctttttcagaatta 45314124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 15747849 - 15747793
Alignment:
Q  134 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaag 190  Q
    |||||||||||| |||||||||||||||||||||||||||| |||  ||||||||||    
T  15747849 caacaactacaatgttaaaccctttttcagaattatacaactcatctttagagaaag 15747793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19566984 - 19566929
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  19566984 caagccctcaacttta-atgagtatgcaaggactcagcaaccaacaactttaacaac 19566929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 14477590 - 14477644
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    ||||||||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  14477590 ctataacatcaaaactatcaacgactacaagatcaaaccctttttcagaattata 14477644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 19565992 - 19565879
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    ||||||||||||||||||||||||||||| |||| | | |  || |||| |||| | || |  |||||||||||||| ||   |||||||||||| ||||    
T  19565992 aacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtaccacccttaccttagattgattgatcgcaaggttctac 19565894  T
Q  235 cgctttctcttctct 249  Q
    |||||||||||||||    
T  19565893 cgctttctcttctct 19565879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 18462983 - 18463036
Alignment:
Q  117 tataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    ||||||||||||||||  |||||||||||  |||||||||||||||||||||||    
T  18462983 tataacatcaaaactattaacaactacaaaattaaaccctttttcagaattata 18463036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16027075 - 16027020
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||||||| |||||||||| |||||||||    
T  16027075 caagccctcaacttta-atgagtatgcatggactcaacaaccaacaagtttaacaac 16027020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 26922710 - 26922659
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||| || |||||||| |||||||||||||||||| |||||||||    
T  26922710 ccctcaacttta-atgagtatgcaaggactcagcaaccaacaaatttaacaac 26922659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 46225574 - 46225542
Alignment:
Q  21 agtatgcatggactcagcaaccaacaactttaa 53  Q
    |||||||||||||||||||||||||||||||||    
T  46225574 agtatgcatggactcagcaaccaacaactttaa 46225542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26444888 - 26444935
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||    
T  26444888 caagccctcaacttaa--tgagtatgcatggactcagcaaccaacaactt 26444935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9637877 - 9637926
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || |||||||||||||||| ||||  |||||||    
T  9637877 caagccctcaactttaaatgagtatgcatggactcaacaactgacaactt 9637926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 19610324 - 19610389
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  19610324 tttcagaattatacaacttaaaattagagaaagttagtctcacccttaccttaaattagatgatcg 19610389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 25091653 - 25091718
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  25091653 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 25091718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 37019670 - 37019723
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    |||||||||||||||||  |  ||||||||||| || |||||||||||||||||    
T  37019670 tttcagaattatacaacttaaaattagagaaagttagtcacacccttaccttag 37019723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14507631 - 14507686
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || ||||||||  ||||||||||||||| |||||| ||||    
T  14507631 caagccctcaacttta-atgagtatgcaaagactcagcaaccaactactttatcaac 14507686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 44024478 - 44024427
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||| || |||||||||| ||| |||||||||||||| |||||||    
T  44024478 ccctcaacttta-atgagtatgcatgaacttagcaaccaacaactctaacaac 44024427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 53630526 - 53630462
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 222  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  ||||||||||    
T  53630526 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatc 53630462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 2822 - 2945
Alignment:
Q  99 aattataaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcac 198  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  2822 aattataaacctaattcctataacatcgaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtccc 2921  T
Q  199 acccttaccttaggttagatgatc 222  Q
    ||||||||||||| ||| ||||||    
T  2922 acccttaccttagattaaatgatc 2945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 1e-50; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 108 - 249
Target Start/End: Original strand, 23610576 - 23610717
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||| || ||||||||||    
T  23610576 cctaatttctataacatcaaaacaaacaacaactagaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccacccttacc 23610675  T
Q  208 ttaggttagatgatcgcaaggtcctaccgctttctcttctct 249  Q
    |||||||||||| ||||||||| |||||| ||||||||||||    
T  23610676 ttaggttagatgttcgcaaggttctaccgttttctcttctct 23610717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 21315576 - 21315475
Alignment:
Q  110 taattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctt 209  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  21315576 taatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacctt 21315477  T
Q  210 ag 211  Q
    ||    
T  21315476 ag 21315475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 21335366 - 21335265
Alignment:
Q  110 taattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctt 209  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  21335366 taatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacctt 21335267  T
Q  210 ag 211  Q
    ||    
T  21335266 ag 21335265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 21369243 - 21369358
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  || ||||||||||    
T  21369243 cctaatttctataacatcaaaactaatataaactacaaggttaaaccctttttcagaattatacaacccattgttagagaaagcttgtcccacccttacc 21369342  T
Q  208 ttaggttagatgatcg 223  Q
    |||| |||||||||||    
T  21369343 ttagattagatgatcg 21369358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 250
Target Start/End: Complemental strand, 19201252 - 19201160
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  19201252 tttcagaattatacaacttagaattagagaaagttagtctcacccttaacttaggttagatgatcgcaaggttctaccgctttctcttctctg 19201160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 149607 - 149488
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccc---tttttcagaattatacaacccattattagagaaagctattcacaccc 202  Q
    ||||||| ||||||||||||||||||||| ||| ||||   |||||||||   ||||| ||||||||||||| |||||||||||||||||| |  |||||    
T  149607 cctaatttctataacatcaaaactaacaa-aacgacaacatgttaaaccccttttttttagaattatacaactcattattagagaaagctagttccaccc 149509  T
Q  203 ttaccttaggttagatgatcg 223  Q
    ||||||||| |||||||||||    
T  149508 ttaccttagattagatgatcg 149488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 23801485 - 23801559
Alignment:
Q  147 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    ||||||||| |||| ||||| |||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  23801485 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattagatgat 23801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 28345088 - 28344987
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||||||| |||||||||| ||| ||| | |||||||| |||| ||||| ||||| |||||||||||||||||||| ||||||||||| |    
T  28345088 cctaatttctataacatcgaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacagcccattattagagaaagctagtcacacccttatc 28344991  T
Q  208 ttag 211  Q
    ||||    
T  28344990 ttag 28344987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 28652654 - 28652593
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactac-aaggttaaaccctttttcagaatta 168  Q
    ||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  28652654 cctaatttctataacatcaaaactaacaacaactacaaaggctaaaccctttttcagaatta 28652593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21336697 - 21336642
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  21336697 caagccctcaacttta-atgagtatgcatggactcagcaaccaacaactttaacaac 21336642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 25584356 - 25584302
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    ||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  25584356 ctataacatcaaaactatcatcaacgacaaggttaaaccctttttcagaattata 25584302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21316795 - 21316740
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||||||| ||||||||||||||||||||    
T  21316795 caagccctcaacttta-atgagtatgcatggactcaacaaccaacaactttaacaac 21316740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 20006075 - 20005970
Alignment:
Q  105 aaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 204  Q
    |||||||| | |||||||||||||| ||  |||||| ||||  |||||||||||||||||||||||  || ||| |||| |||| |||| || |||||||    
T  20006075 aaacctaacttctataacatcaaaattattaacaacaacaaaattaaaccctttttcagaattata-gactcatgattaaagaaggctagtcccaccctt 20005977  T
Q  205 accttag 211  Q
    |||||||    
T  20005976 accttag 20005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 34491337 - 34491239
Alignment:
Q  117 tataacatcaaaacta----acaacaactacaaggttaaaccctttttcagaattatacaacccatta-ttagagaaagctattcacacccttaccttag 211  Q
    ||||||||||||||||    |||||||| || | |||||||||||||||||||||||||||| | ||| |||||| |||||| || ||||||||||||||    
T  34491337 tataacatcaaaactacaaaacaacaacaaccatgttaaaccctttttcagaattatacaactcgttatttagag-aagctagtcccacccttaccttag 34491239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 1384750 - 1384714
Alignment:
Q  21 agtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||||||||||||||||||||||||    
T  1384750 agtatgcatggactcagcaaccaacaactttaacaac 1384714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25085523 - 25085579
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||| ||||||| | || |||||||||||||||||||||||||||||| ||||||    
T  25085523 caagccatcaacttaatatgagtatgcatggactcagcaaccaacaacttaaacaac 25085579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 19647199 - 19647246
Alignment:
Q  123 atcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||||    
T  19647199 atcaaaactattaacaactacaagattaaaccctttttcagaattata 19647246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 45535872 - 45535938
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    ||||||||| | |||||||| || || || ||||||| ||||| |||||||||||||||||||||||    
T  45535872 taaacctaacttctataacaacagaattatcaacaacaacaagattaaaccctttttcagaattata 45535938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5985150 - 5985199
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    ||||||||||||||||||| |||||||||||||| ||||||  |||||||    
T  5985150 caagccctcaactttagatgagtatgcatggacttagcaacttacaactt 5985199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 17307486 - 17307551
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| |||||||||||    
T  17307486 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcg 17307551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18391302 - 18391254
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||||    
T  18391302 caagccctcaacttaa-atgagtatgcatggactcagcaaccaacaactt 18391254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 18388202 - 18388151
Alignment:
Q  198 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctct 249  Q
    |||||||||||||| ||   |||||||||||| |||||||||||||||||||    
T  18388202 cacccttaccttagattgattgatcgcaaggttctaccgctttctcttctct 18388151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 36734527 - 36734450
Alignment:
Q  132 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    ||||||||| || | |||||||||| ||| ||||||||| ||||||||||||||| ||| || || ||||||||||||||    
T  36734527 aacaacaacaaccatgttaaaccctattttagaattata-aacccattattagag-aagttaatcccacccttaccttag 36734450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3538825 - 3538873
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || |||||||||||||||| |||| ||||||||    
T  3538825 caagccctcaacttta-atgagtatgcatggactcaacaacaaacaactt 3538873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 24780892 - 24780827
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  24780892 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 24780827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25140957 - 25141005
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || |||||| ||||||||| |||||||||||||    
T  25140957 caagccctcaacttta-atgagtatggatggactcaacaaccaacaactt 25141005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 50
Target Start/End: Original strand, 27851658 - 27851687
Alignment:
Q  21 agtatgcatggactcagcaaccaacaactt 50  Q
    ||||||||||||||||||||||||||||||    
T  27851658 agtatgcatggactcagcaaccaacaactt 27851687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 44071556 - 44071600
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||| || |||||||||||||||| |||||||||||||    
T  44071556 ccctcaacttta-atgagtatgcatggactcatcaaccaacaactt 44071600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 27860354 - 27860409
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||| | || ||||||| |||||||| ||||||||||||| ||||||    
T  27860354 caagccctcaacttaa-atgagtatgcttggactcatcaaccaacaacttcaacaac 27860409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 116 - 248
Target Start/End: Complemental strand, 5399 - 5267
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  |  ||||||||||| || || ||||||||||||||||||    
T  5399 ctataacatcaaaacgaacaacaactacaaggttaaaccctttttaagaattatacaacttaaaattagagaaagttagtcccacccttaccttaggtta 5300  T
Q  216 gatgatcgcaaggtcctaccgctttctcttctc 248  Q
    |||||||||||||| ||||||||||||||||||    
T  5299 gatgatcgcaaggttctaccgctttctcttctc 5267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 5220 - 5170
Alignment:
Q  198 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctc 248  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5220 cacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctc 5170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 1970 - 2073
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  1970 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttacc 2069  T
Q  208 ttag 211  Q
    ||||    
T  2070 ttag 2073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 3530 - 3411
Alignment:
Q  102 tataaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 201  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||||    
T  3530 tataaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaatcatacaacgcattattagagaaagctagtcccacc 3431  T
Q  202 cttaccttaggttagatgat 221  Q
    |||||||||| |||||||||    
T  3430 cttaccttagattagatgat 3411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 186298 - 186195
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  186298 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttacc 186199  T
Q  208 ttag 211  Q
    ||||    
T  186198 ttag 186195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 9e-45; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 104 - 223
Target Start/End: Complemental strand, 14641654 - 14641535
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 203  Q
    ||||||||||||| | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||    
T  14641654 taaacctaattcccaaaacatcaatactaacaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaagctaatcccaccct 14641555  T
Q  204 taccttaggttagatgatcg 223  Q
    |||||||| |||||||||||    
T  14641554 taccttagattagatgatcg 14641535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 17208474 - 17208577
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| || ||||||||||    
T  17208474 cctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaactcattattagagaaagctagtcccacccttacc 17208573  T
Q  208 ttag 211  Q
    ||||    
T  17208574 ttag 17208577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 14520396 - 14520499
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| || ||||||||||    
T  14520396 cctaatttttataacatcaaaactaacaacaactacaaggttaaacctttttttagaattatacaacccattattaaagaaagctagtcccacccttacc 14520495  T
Q  208 ttag 211  Q
    ||||    
T  14520496 ttag 14520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 29907603 - 29907702
Alignment:
Q  122 catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || |||||||||||||| |||||||||    
T  29907603 catcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttagattagatgat 29907702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 29948769 - 29948868
Alignment:
Q  122 catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || |||||||||||||| |||||||||    
T  29948769 catcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttagattagatgat 29948868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 29997923 - 29998022
Alignment:
Q  122 catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || |||||||||||||| |||||||||    
T  29997923 catcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttagattagatgat 29998022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 13520365 - 13520449
Alignment:
Q  65 acaacaacggcaaccatgttaaaccctattccataattataaacctaattcctataacatcaaaactaacaacaactacaaggtt 149  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13520365 acaacaacaacaaccatgttaaaccctattccagaattataaacctaattcctataacatcaaaactaacaacaactacaaggtt 13520449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 248
Target Start/End: Original strand, 24547150 - 24547290
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||| ||||||| ||| ||||   ||||||| | |||| ||||| ||||||||||||||||||||||| || || || |||||    
T  24547150 cctaatttctataacatcaaa-ctaacaa-aacaacaacatgttaaactcctttttagaatcatacaacccattattagagaaagatagtctcatcctta 24547247  T
Q  206 ccttaggttagatgatcgcaaggtcctaccgctttctcttctc 248  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  24547248 ccttaggttagatgatcgcaaggttctaccgctttctcttctc 24547290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 24549016 - 24548914
Alignment:
Q  148 ttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttct 247  Q
    |||||||| |||| ||||| |||||||||||||||||| |||| || || ||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  24549016 ttaaacccctttttagaatcatacaacccattattagataaagttagtctcacccttactttaggttagatgatcgcaaggttctaccgctttctcttct 24548917  T
Q  248 ctg 250  Q
    |||    
T  24548916 ctg 24548914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 14152474 - 14152394
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 215  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||||||||||||||    
T  14152474 aacaactacaaggttaaaccctttttcagaatgatacaactcattattagagaaagctagtcccacccttaccttaggtta 14152394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 6159354 - 6159470
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||| | || ||||||||    
T  6159354 cctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagcgagtctcaccctta 6159452  T
Q  206 ccttaggttagatgatcg 223  Q
    |||||| |||||||||||    
T  6159453 ccttagattagatgatcg 6159470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 22841386 - 22841278
Alignment:
Q  108 cctaattcctataacatcaaaactaacaa--caactacaag---gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccc 202  Q
    ||||||| ||||||| |||||||||||||  |||| ||||    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  22841386 cctaatttctataacctcaaaactaacaaaacaacaacaatcatgttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccc 22841287  T
Q  203 ttaccttag 211  Q
    |||| ||||    
T  22841286 ttacattag 22841278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 2841608 - 2841505
Alignment:
Q  109 ctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 206  Q
    |||||| ||||||||||||||||||||| ||| ||||   ||||||||  |||| ||||| |||||||||||||||||||||||||| ||||||||||||    
T  2841608 ctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacctctttttagaatcatacaacccattattagagaaagctagtcacacccttac 2841510  T
Q  207 cttag 211  Q
    |||||    
T  2841509 cttag 2841505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 54875577 - 54875474
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || ||||||||    
T  54875577 cctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctta 54875479  T
Q  206 cctta 210  Q
    |||||    
T  54875478 cctta 54875474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 5215627 - 5215699
Alignment:
Q  138 aactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctta 210  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |  |||||||||||||    
T  5215627 aactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtgccacccttacctta 5215699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 3527257 - 3527156
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| ||||||||||||||||||||| ||| ||| | |||||||| |||| | ||| |||||||||||||||||||||||||| || ||||||||||    
T  3527257 cctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttaaaatcatacaacccattattagagaaagctagtcccacccttacc 3527160  T
Q  208 ttag 211  Q
    ||||    
T  3527159 ttag 3527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 45803409 - 45803338
Alignment:
Q  132 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 203  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  45803409 aacaacaacaacgatgttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 45803338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 6156660 - 6156763
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || ||||||||    
T  6156660 cctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttt-agaatcatacaacccattattagagaaagctagtcccaccctta 6156757  T
Q  206 ccttag 211  Q
    ||||||    
T  6156758 ccttag 6156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 17684938 - 17684835
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| |||||  ||||||||| |||| ||||| |||||||||||||||| ||||| ||| || ||||||||    
T  17684938 cctaatttctataacatcaaaactaacaa-aacaacaagatgttaaacccctttttagaatcatacaacccattattacagaaaactagtcccaccctta 17684840  T
Q  206 cctta 210  Q
    |||||    
T  17684839 cctta 17684835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 257
Target Start/End: Original strand, 14442124 - 14442273
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||   ||||||||  |||| ||||| |||||||||||||||| ||||||||| || ||||||||    
T  14442124 cctaatttctataacatcaaaactaacaa-aacaacaacatgttaaaccgctttttagaatcatacaacccattattacagaaagctagtcccaccctta 14442222  T
Q  206 ccttaggttagatgatcgcaaggtcctaccgctttctcttctctgcttctcc 257  Q
    |||||| ||   |||||| ||||| |||| |  |||||||||||| ||||||    
T  14442223 ccttagattgattgatcgaaaggttctacag-gttctcttctctggttctcc 14442273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 15566721 - 15566809
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    ||||||||||||||||||||||||||||||||||||||||  |  ||||||||||| || || ||||||||| |||| ||| |||||||    
T  15566721 aacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttactttagattacatgatcg 15566809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17207199 - 17207255
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  17207199 caagccctcaactttagatgagtatgcatggactcaacaaccaacaactttaacaac 17207255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 54331409 - 54331353
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  54331409 caagccctcaagtttagatgagtatgcatggactcagcaaccaacaactttaacaac 54331353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 2247942 - 2247883
Alignment:
Q  134 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 193  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  2247942 caacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagcta 2247883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 17669801 - 17669698
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || || | |||    
T  17669801 cctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccatcatta 17669703  T
Q  206 cctta 210  Q
    |||||    
T  17669702 cctta 17669698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 21845756 - 21845691
Alignment:
Q  105 aaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    |||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||| ||||    
T  21845756 aaacctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata 21845691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24545694 - 24545749
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  24545694 caagccctcaacttta-atgagtatgcatggactcagcaaccaacaactttaacaac 24545749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 211
Target Start/End: Complemental strand, 3160732 - 3160626
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 203  Q
    ||||||||||| |||||| |||||||||| |||||||||||| ||||||||| |||| |||||||||  || ||| |||| |||| | || || ||||||    
T  3160732 taaacctaatttctataatatcaaaactatcaacaactacaaagttaaacccatttttagaattata-tactcatgattaaagaaggttagtctcaccct 3160634  T
Q  204 taccttag 211  Q
    ||||||||    
T  3160633 taccttag 3160626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 12917384 - 12917305
Alignment:
Q  132 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    ||||||||| || | |||||||||||||| ||||| ||||||||||||||||||||||| || || |||||||| |||||    
T  12917384 aacaacaacaaccatgttaaacccttttttagaatcatacaacccattattagagaaagttagtcccacccttatcttag 12917305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 50350912 - 50350803
Alignment:
Q  116 ctataacatcaaaactaacaacaactac-aaggttaaaccc--tttttcagaattatacaacccattattagagaaagctattcacacccttaccttagg 212  Q
    ||||||||||||||||||||| |||||| ||||||||||||  |||||||||||||||  || ||| |||| |||| | || || ||||||||||||||     
T  50350912 ctataacatcaaaactaacaaaaactacaaaggttaaaccccttttttcagaattata-tactcatgattaaagaaggttagtcccacccttaccttaga 50350814  T
Q  213 ttagatgatcg 223  Q
    |||||||||||    
T  50350813 ttagatgatcg 50350803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 48631290 - 48631344
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    |||||||||||||||||  |||||||||||| |||||||||||||||||| ||||    
T  48631290 ctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata 48631344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6155703 - 6155751
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||    
T  6155703 caagccctcaacttta-atgagtatgcatggactcagcaaccaacaactt 6155751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 50755357 - 50755274
Alignment:
Q  108 cctaattcctataacatcaaaactaacaa--caactacaaggttaaaccctttttcagaattatacaacccattattagagaaag 190  Q
    ||||||| |||||||||||||||||||||  |||| ||| | |||||||| |||| ||||| |||||| ||||||||||||||||    
T  50755357 cctaatttctataacatcaaaactaacaaagcaacaacatg-ttaaacccctttttagaatcatacaatccattattagagaaag 50755274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 9512046 - 9511995
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||| || |||||||||||||||||||||||| ||||||||||||    
T  9512046 ccctcaacttta-atgagtatgcatggactcagcaaccaataactttaacaac 9511995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 9520021 - 9519970
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||| || |||||||||||||||||||||||| ||||||||||||    
T  9520021 ccctcaacttta-atgagtatgcatggactcagcaaccaataactttaacaac 9519970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17044109 - 17044164
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||| | || |||||||||||||||||||||||||||||| ||||||    
T  17044109 caagccctcaacttaa-atgagtatgcatggactcagcaaccaacaacttaaacaac 17044164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 53646899 - 53646843
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||| | || |||||||||||||||| ||||||||||||| ||||||    
T  53646899 caagccctcaacttaatatgagtatgcatggactcaccaaccaacaacttaaacaac 53646843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11192016 - 11192064
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || ||||||||||||||||| ||||||||||||    
T  11192016 caagccctcaacttta-atgagtatgcatggactcagaaaccaacaactt 11192064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14519420 - 14519475
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||||||  |||||| |||||||||||||    
T  14519420 caagccctcaacttta-atgagtatgcatggactcgacaaccatcaactttaacaac 14519475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17259227 - 17259172
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    ||||||||||| |||| || |||||||||||||||| ||||||||||||| ||||||    
T  17259227 caagccctcaa-tttaaatgagtatgcatggactcaacaaccaacaacttaaacaac 17259172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 211
Target Start/End: Original strand, 25202081 - 25202187
Alignment:
Q  105 aaacctaattcctataa-catcaaaa-ctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccc 202  Q
    |||||||||| || ||| |||||||| | ||||||||| || | |||||||||| ||||||| ||||| ||||||||||||| ||| |||| || |||||    
T  25202081 aaacctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaaccctatttcagatttata-aacccattattagcgaa-gctagtcccaccc 25202178  T
Q  203 ttaccttag 211  Q
    |||||||||    
T  25202179 ttaccttag 25202187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 11563724 - 11563821
Alignment:
Q  157 ttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgcttct 255  Q
    ||||||||||||||| ||  |  ||||||||| | || || |||||||||||||| ||||||||||| ||||| |||| |  |||||||||||| ||||    
T  11563724 ttttcagaattataccacttagaattagagaaggttagtcccacccttaccttagattagatgatcggaaggttctacag-gttctcttctctggttct 11563821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 17044966 - 17045031
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  17044966 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 17045031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 17047126 - 17047191
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  17047126 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 17047191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 17518925 - 17518860
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || ||||||| |||||| |||||||||||    
T  17518925 tttcagaattatacaacttagaattagagaaagttagtcccacccttgccttagattagatgatcg 17518860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 17533787 - 17533722
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || ||||||| |||||| |||||||||||    
T  17533787 tttcagaattatacaacttagaattagagaaagttagtcccacccttgccttagattagatgatcg 17533722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 22306635 - 22306570
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  22306635 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 22306570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 49900730 - 49900795
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||  || || |||||||||||||| |||||||||||    
T  49900730 tttcagaattatacaacttagaattagagaaaattagtcccacccttaccttagattagatgatcg 49900795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 53646133 - 53646100
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaatta 168  Q
    ||||||||||||||||||||||||||||| ||||    
T  53646133 aacaactacaaggttaaaccctttttcaggatta 53646100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 54330381 - 54330348
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaatta 168  Q
    ||||||||||||||||||||||||||||| ||||    
T  54330381 aacaactacaaggttaaaccctttttcaggatta 54330348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 6003136 - 6003247
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| || |||||||| || || |||||||  ||| ||||  |||||||||||||||||| ||| || ||||| |||| | || || ||||||||||    
T  6003136 cctaatttctttaacatcacaattatcaacaacatcaaagttagcccctttttcagaattatagaactca-tattaaagaaggttagtcccacccttacc 6003234  T
Q  208 ttaggttagatga 220  Q
    |||| || |||||    
T  6003235 ttagattggatga 6003247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 16050916 - 16050984
Alignment:
Q  147 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 215  Q
    |||||||||  ||||||||| |||||||  |  ||||||||||| || || ||||||||||||||||||    
T  16050916 gttaaacccaatttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttaggtta 16050984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 17541434 - 17541498
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 222  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  ||||||||||    
T  17541434 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatc 17541498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 48043539 - 48043477
Alignment:
Q  147 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    |||||||||| ||||| ||||||| || |||||||||||||| |||| | |||||||||||||||    
T  48043539 gttaaaccctatttcaaaattata-aatccattattagagaa-gctagttacacccttaccttag 48043477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 123 - 248
Target Start/End: Complemental strand, 2287 - 2162
Alignment:
Q  123 atcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |  ||||||||||  || || |||||||||||||||||||||||||    
T  2287 atcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaaattagtcccacccttaccttaggttagatgatc 2188  T
Q  223 gcaaggtcctaccgctttctcttctc 248  Q
    ||||||| ||||||||||||||||||    
T  2187 gcaaggttctaccgctttctcttctc 2162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 379 - 324
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    ||||||||||| |||| || |||||||||||||||||||||||||||||||||||||    
T  379 caagccctcaatttta-atgagtatgcatggactcagcaaccaacaactttaacaac 324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 104 - 211
Target Start/End: Original strand, 13895 - 14002
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 203  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  13895 taaacctaattcccaaaacatcaaaactaacaacaacttcaaggttaaaccctttttcagaattttacaacccattattagagaaagctagtcccaccct 13994  T
Q  204 taccttag 211  Q
    ||||||||    
T  13995 taccttag 14002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 105 - 221
Target Start/End: Complemental strand, 14692 - 14575
Alignment:
Q  105 aaacctaattcctataa-catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 203  Q
    |||||||||| || ||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  14692 aaacctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcaccct 14593  T
Q  204 taccttaggttagatgat 221  Q
    |||||||| |||||||||    
T  14592 taccttagattagatgat 14575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 105 - 221
Target Start/End: Complemental strand, 23750 - 23633
Alignment:
Q  105 aaacctaattcctataa-catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 203  Q
    |||||||||| || ||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  23750 aaacctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcaccct 23651  T
Q  204 taccttaggttagatgat 221  Q
    |||||||| |||||||||    
T  23650 taccttagattagatgat 23633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 104 - 223
Target Start/End: Complemental strand, 18747 - 18627
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaatta-tacaacccattattagagaaagctattcacaccc 202  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||| || |||||    
T  18747 taaacctaattcccaaaacatcaaaactaacaacaactacaaggttaaaccttttttcaaaattattacaactcattattagagaaagctagtcccaccc 18648  T
Q  203 ttaccttaggttagatgatcg 223  Q
    ||||||||| |||||||||||    
T  18647 ttaccttagattagatgatcg 18627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 17629 - 17520
Alignment:
Q  102 tataaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 201  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||  |||    
T  17629 tataaccctaatttctataacagcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaatccattattagaaaaagctagtccgacc 17530  T
Q  202 cttaccttag 211  Q
    ||||||||||    
T  17529 cttaccttag 17520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 116 - 249
Target Start/End: Original strand, 26685 - 26818
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 215  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||| || || |||||||||| ||| ||     
T  26685 ctataacatcaaagctaacaacaactacaaagttaaaccctttttcagaattatacaacctaaaattagagaaagttaatcccacccttaccgtagattg 26784  T
Q  216 gatgatcgcaaggtcctaccgctttctcttctct 249  Q
      |||||||||||| |||||||||||||||||||    
T  26785 attgatcgcaaggttctaccgctttctcttctct 26818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 25665 - 25719
Alignment:
Q  2 aagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    ||||||||||||||| || ||||||||||||||||||||||| |||||||||||||    
T  25665 aagccctcaacttta-atgagtatgcatggactcagcaaccatcaactttaacaac 25719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 23561 - 23626
Alignment:
Q  105 aaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    |||||||| | |||||||||||||||||  |||||||||||  ||||||||||||| |||||||||    
T  23561 aaacctaacttctataacatcaaaactattaacaactacaaaattaaacccttttttagaattata 23626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 1028 - 1128
Alignment:
Q  110 taattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctt 209  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||    
T  1028 taatttctaaaacatcaaaactaacaacatctacaaggttaaaccctttttcagaattatacaatccattattagagaaagctagtctcacccttacctt 1127  T
Q  210 a 210  Q
    |    
T  1128 a 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 18042 - 17927
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |  ||||||||||| || || ||||||||||    
T  18042 cctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaacttagaattagagaaagttagtcccacccttacc 17943  T
Q  208 ttaggttagatgatcg 223  Q
    |||| |||||||||||    
T  17942 ttagattagatgatcg 17927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19142 - 19074
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaacatcgacgacaaca 70  Q
    |||||||||||||| | || |||||||||||||||| ||||  ||||||||||| |||| ||||||||||    
T  19142 caagccctcaacttaa-atgagtatgcatggactcaacaacttacaactttaacgacattgacgacaaca 19074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 108 - 221
Target Start/End: Complemental strand, 15717 - 15605
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 207  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| ||| || || ||||||||||    
T  15717 cctaatttctataacatcaaaactaacaacaactacaaggttaaacccttttttagaatcatacaaaccattattagag-aagttagtcccacccttacc 15619  T
Q  208 ttaggttagatgat 221  Q
    |||| |||||||||    
T  15618 ttagattagatgat 15605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 72; Significance: 8e-33; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 16507 - 16380
Alignment:
Q  122 catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || || |||||||||||||| ||   ||||    
T  16507 catcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatctcacccttaccttagattgattgat 16408  T
Q  222 cgcaaggtcctac-cgctttctcttctc 248  Q
    | |||||| ||||  |||||||||||||    
T  16407 cacaaggttctacaagctttctcttctc 16380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 250
Target Start/End: Complemental strand, 18781 - 18660
Alignment:
Q  130 ctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggt 229  Q
    |||||||||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||| || || |||||| ||||||| || | ||||  ||||||    
T  18781 ctaacaacaactacaaggctaaaccgtttttaagaattatacaactcattattagagaaagttaatcccaccctcaccttagattggttgattacaaggt 18682  T
Q  230 cctac-cgctttctcttctctg 250  Q
     ||||  |||||||||||||||    
T  18681 tctacaagctttctcttctctg 18660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 18951 - 18902
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaa 165  Q
    ||||| ||||||||||| ||||||||||||  ||||||| ||||||||||    
T  18951 ctatagcatcaaaactatcaacaactacaaaattaaaccttttttcagaa 18902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 158834 - 158782
Alignment:
Q  198 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    |||||||||||||| ||   ||||||||||||  |||||||||||||||||||    
T  158834 cacccttaccttagattgattgatcgcaaggttttaccgctttctcttctctg 158782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 108 - 219
Target Start/End: Complemental strand, 2558 - 2445
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaacccttttt--cagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||| || ||||||||    
T  2558 cctaatttctataacatcaaaactaataacgactacaaggttaaaccatttttttcagaattatacaacccattattagagaaagctagtcccaccctta 2459  T
Q  206 ccttaggttagatg 219  Q
    |||||  |||||||    
T  2458 ccttaaattagatg 2445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 4894 - 4999
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaa-ggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtt 214  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||||  ||    
T  4894 ctataacatcaaaactaacaacaactacaaaggttaaacccttttacagaattatacaacc-attattagagaaagctagtcccacccttaccttatatt 4992  T
Q  215 agatgat 221  Q
    |||||||    
T  4993 agatgat 4999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1727 - 1782
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||| ||||||||||| || |||||||||||||||||||| ||||||||||||||||    
T  1727 caagtcctcaacttta-atgagtatgcatggactcagcaatcaacaactttaacaac 1782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 3742 - 3799
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaacatcgac 63  Q
    |||||||||||| || |||||||||||||||| |||||||||| ||||||||| |||||    
T  3742 ccctcaacttta-atgagtatgcatggactcaacaaccaacaaatttaacaacttcgac 3799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 6395 - 6510
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    |||||||||||| |||| |||||||||||||||| ||||| |||||||||||||||||| ||  ||||||||||||| ||   |||||||||||| ||||    
T  6395 aacaactacaagattaatccctttttcagaattacacaactcattattagagaaagctagtcttacccttaccttagattgattgatcgcaaggttctac 6494  T
Q  235 cgctttctcttctctg 250  Q
    ||||||||||||||||    
T  6495 cgctttctcttctctg 6510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7910 - 7855
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||| ||||||    
T  7910 caagccctcaacttta-atgagtatgcatggactcagcaaccaacaacttaaacaac 7855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 257
Target Start/End: Complemental strand, 8849 - 8700
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaa--ggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||  |||| ||||| |||| ||||| ||||||||||||||||||| |||||| || ||||||||    
T  8849 cctaatttctataacatcaaaactaacaa-aacaacaataggttcaacccctttttagaatcatacaacccattattagagtaagctagtctcaccctta 8751  T
Q  206 ccttaggttagatgatcgcaaggtcctaccgctttctcttctctgcttctcc 257  Q
    |||||| ||||||||||| ||||| |||| |  |||||||||||| ||||||    
T  8750 ccttagattagatgatcggaaggttctacag-gttctcttctctggttctcc 8700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 250
Target Start/End: Complemental strand, 6513 - 6380
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaa-ggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtt 214  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | | |  || ||||  ||| | || || |||||||||||||||||    
T  6513 ctataacatcaaaactaacaacaactacaaaggttaaacccttttt-agaattacata-cttatgattaatgaaggttagtcccacccttaccttaggtt 6416  T
Q  215 agatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    ||||||||||||||| ||||||||||||||||||||    
T  6415 agatgatcgcaaggttctaccgctttctcttctctg 6380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7473 - 7418
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  7473 caagccctcaacttta-atgagtatgcaaggactcagcaaccaacaactttaacaac 7418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 64; Significance: 5e-28; HSPs: 3)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 19165 - 19272
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 215  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |  ||||||||||| || || ||||||||| |||| |||    
T  19165 ctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttacgttagatta 19264  T
Q  216 gatgatcg 223  Q
    ||| ||||    
T  19265 gatcatcg 19272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18141 - 18202
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaacatcgac 63  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| |||||    
T  18141 caagccctcaagttta-atgagtatgcatggactcagcaaccaacaactttaacaacttcgac 18202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 19119 - 19160
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaaggttaaaccctt 157  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  19119 ctataacatcaaaactatcaacaactacaaggttaaaccctt 19160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 61940 - 61835
Alignment:
Q  117 tataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttag 216  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||  |  ||||||||||| || || |||||||||||||| ||||    
T  61940 tataacatcaaaactaacaacaactacaaggttaaatcc-ttttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattag 61842  T
Q  217 atgatcg 223  Q
    |||||||    
T  61841 atgatcg 61835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 5608 - 5698
Alignment:
Q  135 aacaactacaaggttaaaccctttt--tcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  5608 aacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgatcg 5698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 2221 - 2300
Alignment:
Q  132 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  2221 aacaacaacaactatgttaaaccctttttcagaattatacaacccattattatagaaagctagtcccacccttaccttag 2300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 8799 - 8913
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    |||| |||||||||||||||||||||||| |||| | | |  || |||| |||| | || || |||||||||||||||||||||||||||||||| ||||    
T  8799 aacatctacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccacccttaccttaggttagatgatcgcaaggttctac 8897  T
Q  235 cgctttctcttctctg 250  Q
    ||||||||||||||||    
T  8898 cgctttctcttctctg 8913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 19805 - 19921
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||| ||| ||  |||||||    
T  19805 cctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaatctagtcctaccctta 19903  T
Q  206 ccttaggttagatgatcg 223  Q
    |||||| |||||||||||    
T  19904 ccttagattagatgatcg 19921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 5445 - 5517
Alignment:
Q  149 taaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    |||||||||||||||||||||||||| ||||||||||||||| || || |||||||||||||| |||||||||    
T  5445 taaaccctttttcagaattatacaactcattattagagaaaggtagtcccacccttaccttagattagatgat 5517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 11590 - 11681
Alignment:
Q  132 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||| |||||||||  || || |||||||| ||||  |||||||||||    
T  11590 aacaacaacaacgatgttaaaccctttttcagaattatacaacccatttttagagaaatttagtcccacccttatcttacattagatgatcg 11681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 248
Target Start/End: Complemental strand, 9999 - 9890
Alignment:
Q  138 aactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgc 237  Q
    |||||||||| |||||||||||||||||||| | | |  || |||| |||| | || || |||||||||||||||||||||||||||||||| |||||||    
T  9999 aactacaaggctaaaccctttttcagaattacata-cttatgattaaagaaggttagtcccacccttaccttaggttagatgatcgcaaggttctaccgc 9901  T
Q  238 tttctcttctc 248  Q
    |||||||||||    
T  9900 tttctcttctc 9890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 10897 - 11011
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||   |||||||||||||| ||||| |||||||||||||||||||||||||| |  ||||||||    
T  10897 cctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccttttt-agaatcatacaacccattattagagaaagctagttccaccctta 10994  T
Q  206 ccttaggttagatgatc 222  Q
    |||||  ||||||||||    
T  10995 ccttatattagatgatc 11011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 54; Significance: 4e-22; HSPs: 7)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 66150 - 66061
Alignment:
Q  132 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||| ||| || ||||||||||||||  ||||||||    
T  66150 aacaacaacaaccatgttaaaccctttttcagaattatacaacccattattaaagaaatctagtcccacccttaccttagaatagatgat 66061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 328318 - 328249
Alignment:
Q  180 attagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctct 249  Q
    ||||||||||| || || |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  328318 attagagaaagttagtcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctct 328249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 219
Target Start/End: Original strand, 75886 - 75998
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    |||||||| ||||||||||||||||| || ||| ||||   ||||||||| |||| ||||| ||||||||||||||| |||||||||| || ||||||||    
T  75886 cctaattcttataacatcaaaactaataa-aacaacaacatgttaaacccctttttagaatcatacaacccattattggagaaagctagtcccaccctta 75984  T
Q  206 ccttaggttagatg 219  Q
    |||||| |||||||    
T  75985 ccttagattagatg 75998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 111344 - 111413
Alignment:
Q  142 acaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    |||| ||||||||| |||| ||||| ||||||||||||||||||||||||||  | ||||||||||||||    
T  111344 acaatgttaaacccctttttagaatcatacaacccattattagagaaagctagccccacccttaccttag 111413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 219
Target Start/End: Original strand, 73036 - 73148
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    |||||||| |||||||| |||||||| || ||| ||||   ||||||||| |||| ||||| ||||||| ||||||||||||||| || || ||||||||    
T  73036 cctaattcttataacataaaaactaataa-aacaacaacatgttaaacccctttttagaatcatacaactcattattagagaaagttagtcccaccctta 73134  T
Q  206 ccttaggttagatg 219  Q
    |||||  |||||||    
T  73135 ccttacattagatg 73148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 109232 - 109289
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaacat 59  Q
    |||||||||||||| | || ||||||||||||||| |||||||||||||| ||| ||||    
T  109232 caagccctcaacttaa-atgagtatgcatggactccgcaaccaacaacttaaacgacat 109289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 67080 - 67040
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaac 41  Q
    |||||||||||||||| || | |||||||||||||||||||    
T  67080 caagccctcaactttaaatgattatgcatggactcagcaac 67040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4550 - 4494
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4550 caagtcctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 4494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9110 - 9054
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9110 caagtcctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 9054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 23503 - 23587
Alignment:
Q  127 aaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    ||||||||||||||| ||||||| ||||| |||| ||| |||||||||||||||||||||||||||| ||  |||||||||||||    
T  23503 aaactaacaacaactgcaaggtttaacccctttttagatttatacaacccattattagagaaagctagtcctacccttaccttag 23587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 40257 - 40204
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattat 169  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  40257 ctataacatcaaaactatcaacaactacatggttaaacccttttttagaattat 40204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 59763 - 59695
Alignment:
Q  102 tataaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    ||||||||||||| |||||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  59763 tataaacctaatttctataatatcaaaactatcaacaactacaaagttaaaccctttttcagaattata 59695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 127438 - 127332
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggt 213  Q
    ||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||| ||||||||||||||||||| || |||||||||||||| |    
T  127438 ctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaatccattattagagaaagctagtcccacccttaccttagat 127340  T
Q  214 tagatgat 221  Q
    ||||||||    
T  127339 tagatgat 127332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 323 - 437
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    ||||||||||||||||||||||||||||| |||| | | |  || |||| ||||   || || |||||||||||||||||||||||||||||||| ||||    
T  323 aacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaagattaatctcacccttaccttaggttagatgatcgcaaggttctac 421  T
Q  235 cgctttctcttctctg 250  Q
    ||||||||||| ||||    
T  422 cgctttctcttttctg 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 4399 - 4510
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    |||||||||||||||||||| |||||| | |||||| | |  || |||| |||| | || || ||||||||||||||||||||||||||||||||  |||    
T  4399 aacaactacaaggttaaaccttttttcgggattatata-cttatgattaaagaaggttagtcccacccttaccttaggttagatgatcgcaaggttgtac 4497  T
Q  235 cgctttctcttct 247  Q
    |||||||||||||    
T  4498 cgctttctcttct 4510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3517 - 3566
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaacttt 51  Q
    ||||||||||| |||| || | |||||||||||||||||||||||||||||    
T  3517 caagccctcaaattta-atgactatgcatggactcagcaaccaacaacttt 3566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 39955 - 40011
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  39955 caagccctcaactttagatgaatatgcatggactcagcaaccaacaactttaacaac 40011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 33432 - 33546
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 234  Q
    |||||||||| | |||||||||||||||| |||| | | |  || |||| |||| | || || |||||||||||||| ||   |||||||||||| ||||    
T  33432 aacaactacacgtttaaaccctttttcaggattaaata-cttatgattaaagaaggttagtcccacccttaccttagattgattgatcgcaaggttctac 33530  T
Q  235 cgctttctcttctctg 250  Q
    ||||||||||||||||    
T  33531 cgctttctcttctctg 33546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 361 - 420
Alignment:
Q  134 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 193  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  361 caacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagcta 420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 35264 - 35185
Alignment:
Q  132 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    ||||||||| || | |||||||||||||| ||||||||||||||||||||||| |||||||| |  ||||||||||||||    
T  35264 aacaacaacaaccatgttaaacccttttttagaattatacaacccattattagggaaagctagtaccacccttaccttag 35185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 206
Target Start/End: Complemental strand, 35591 - 35490
Alignment:
Q  105 aaacctaattcctataac-atcaaaa-ctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccc 202  Q
    |||||||||| || |||| ||||||| | ||||||||| || | |||||||||| ||||||||||||| ||||||| ||||||| |||||| || |||||    
T  35591 aaacctaatttctctaaccatcaaaatcaaacaacaacaaccatgttaaaccctatttcagaattata-aacccatcattagag-aagctaatcccaccc 35494  T
Q  203 ttac 206  Q
    ||||    
T  35493 ttac 35490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 35413 - 35341
Alignment:
Q  132 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 206  Q
    ||||||||| || | |||||||||| ||||||||||||| ||||||| ||||||| |||||| || |||||||||    
T  35413 aacaacaacaaccatgttaaaccctatttcagaattata-aacccatcattagag-aagctaatcccacccttac 35341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 40056 - 40160
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| ||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| ||||||||||||||||||||||| || || || |||||    
T  40056 cctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagttagtcgcatcctta 40154  T
Q  206 ccttag 211  Q
    ||||||    
T  40155 ccttag 40160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 39174 - 39233
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaacatc 60  Q
    |||||||||||||||| || |||||||||||||||| ||||  |||||||  ||||||||    
T  39174 caagccctcaactttaaatgagtatgcatggactcaacaacttacaacttggacaacatc 39233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 38546 - 38441
Alignment:
Q  105 aaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 204  Q
    |||||||| | |||||||||||||||||  |||||||||||  |||||||||||||||||||||||  || ||| |||| |||| | || ||||||||||    
T  38546 aaacctaacttctataacatcaaaactattaacaactacaaaattaaaccctttttcagaattata-tactcatgattaaagaaggttagtcacaccctt 38448  T
Q  205 accttag 211  Q
    |||||||    
T  38447 accttag 38441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3800 - 3855
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  3800 caagccctcaacttta-atgagtatgcatggactcagcaaccaacaactttaacaac 3855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 23984 - 23932
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaacccttttt 160  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  23984 cctaatttctataacatcaaaactaataacaactacaaggttaaacccttttt 23932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 211
Target Start/End: Original strand, 3151 - 3257
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 203  Q
    ||||||||| | ||||||||||||||||| ||||||||||||  ||||||||||||||| |||||||  || ||| |||| |||| | || || ||||||    
T  3151 taaacctaacttctataacatcaaaactatcaacaactacaaaattaaaccctttttcataattata-tactcatgattaaagaaggttagtcccaccct 3249  T
Q  204 taccttag 211  Q
    ||||||||    
T  3250 taccttag 3257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 28509 - 28564
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaa-ggttaaaccctttttcagaattata 170  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  28509 ctataacataaaaactaacaacaactacaaaggttaaaccctttttcagaattata 28564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 6568 - 6494
Alignment:
Q  147 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| || || | || ||||||||| |||||||||    
T  6568 gttaaaccccttttcagaatcatacaacccattattagagaaaggtagtcccgcctttaccttagattagatgat 6494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 11263 - 11147
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggt--taaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    |||||||  |||||||||||||||||||| ||| ||||  |  ||||||| |||| ||||| |||||||||||||||||||||||||| || || |||||    
T  11263 cctaatttatataacatcaaaactaacaa-aacaacaacatgataaacccctttttagaatcatacaacccattattagagaaagctagtcccatcctta 11165  T
Q  206 ccttaggttagatgatcg 223  Q
    |||||  |||| ||||||    
T  11164 ccttaaattaggtgatcg 11147  T

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Target: scaffold0371 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11286 - 11230
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||| | || |||||||||||||||||||||||||||||| ||||||    
T  11286 caagccctcaacttaatatgagtatgcatggactcagcaaccaacaacttaaacaac 11230  T

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Target: scaffold0371; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16665 - 16713
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||||    
T  16665 caagccctcaactt-atatgagtatgcatggactcagcaaccaacaactt 16713  T

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Target: scaffold0123 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15989 - 16044
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || | |||||||||||||||||||||||||||||||||||    
T  15989 caagccctcaacttta-atgattatgcatggactcagcaaccaacaactttaacaac 16044  T

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Target: scaffold0063 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 61806 - 61861
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  61806 caagcccccaactttag-tgagtatgcatggactcagcaaccaacaactttaacaac 61861  T

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Target: scaffold0054 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 65977 - 65922
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| |||||||||    
T  65977 caagccctcaacttta-atgagtatgcatggactcagcaaccaacaaatttaacaac 65922  T

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Target: scaffold0035 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 43892 - 43786
Alignment:
Q  105 aaacctaattcctataa-catcaaaa-ctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccc 202  Q
    |||||||||| || ||| |||||||| |||| |||||| || | |||||||||| ||||||||||||| ||||||||||||||| |||||| || |||||    
T  43892 aaacctaatttctctaatcatcaaaatctaataacaacaaccatgttaaaccctatttcagaattata-aacccattattagag-aagctagtcccaccc 43795  T
Q  203 ttaccttag 211  Q
    |||||||||    
T  43794 ttaccttag 43786  T

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Target: scaffold0180 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 10572 - 10630
Alignment:
Q  134 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 193  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||||    
T  10572 caacaactacaatgttaaaccctttttcagaattatacaa-ccatctttagagaaagcta 10630  T

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Target: scaffold0394 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 7618 - 7513
Alignment:
Q  105 aaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 204  Q
    |||||||| | ||||||||||||||||| ||||||||| ||  ||||||||||||||||||| |||  || ||| |||| |||| | || || |||||||    
T  7618 aaacctaacttctataacatcaaaactatcaacaactataaaattaaaccctttttcagaatcata-tactcataattaaagaaggttagtcccaccctt 7520  T
Q  205 accttag 211  Q
    |||||||    
T  7519 accttag 7513  T

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Target: scaffold0217 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 28664 - 28726
Alignment:
Q  108 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    ||||||||||||||||  |||||||  |||||||||||| |||||| ||||||||||||||||    
T  28664 cctaattcctataacaataaaactattaacaactacaagattaaacgctttttcagaattata 28726  T

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Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 17053 - 17118
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    ||||||||||| |||||| |||||| ||| |||||||||||| |||||||||||||| |||||||||    
T  17053 taaacctaatttctataatatcaaa-ctatcaacaactacaaagttaaaccctttttaagaattata 17118  T

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Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 26584 - 26649
Alignment:
Q  104 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 170  Q
    ||||||||||| |||||| |||||| ||| |||||||||||| |||||||||||||| |||||||||    
T  26584 taaacctaatttctataatatcaaa-ctatcaacaactacaaagttaaaccctttttaagaattata 26649  T

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Target: scaffold0251 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21012 - 20964
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||    
T  21012 caagccctcaacttta-atgagtatgcatggactcagcaaccaacaactt 20964  T

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Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11700 - 11651
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    ||||||||||||||||||| |||||||||||||||||||||  |||||||    
T  11700 caagccctcaactttagatgagtatgcatggactcagcaacttacaactt 11651  T

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Target: scaffold0083; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 929 - 880
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    ||||||||||||||||||| |||||||||||||| ||||||  |||||||    
T  929 caagccctcaactttagatgagtatgcatggacttagcaacttacaactt 880  T

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Target: scaffold0083; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6233 - 6184
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    ||||||||||||||||||| |||||||||||||| ||||||  |||||||    
T  6233 caagccctcaactttagatgagtatgcatggacttagcaacttacaactt 6184  T

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Target: scaffold0205 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 5721 - 5615
Alignment:
Q  105 aaacctaattcctataa-catcaaaa-ctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccc 202  Q
    |||||||||| || ||| |||||||| | ||||||||| || | |||||| ||| ||||||||||||| ||||||||||||||| |||||| || |||||    
T  5721 aaacctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaatcctatttcagaattata-aacccattattagag-aagctagtcccaccc 5624  T
Q  203 ttaccttag 211  Q
    |||||||||    
T  5623 ttaccttag 5615  T

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Target: scaffold0148 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 8843 - 8907
Alignment:
Q  157 ttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 221  Q
    |||||||||| |||||| ||||||||||| ||||||| || |||||||| ||||| |||||||||    
T  8843 ttttcagaatcatacaatccattattagataaagctagtcccacccttaacttagattagatgat 8907  T

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Target: scaffold0048 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 56110 - 56165
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| || | ||||||||||||||||||||||| |||||||||||    
T  56110 caagccctcaacttta-atgattatgcatggactcagcaaccaacgactttaacaac 56165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 57013 - 57065
Alignment:
Q  198 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 250  Q
    |||||||||||||||||| |||||||| |||| ||||| ||||||||||||||    
T  57013 cacccttaccttaggttatatgatcgccaggttctaccactttctcttctctg 57065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 68789 - 68725
Alignment:
Q  147 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    ||||||||| |||| ||||| ||| ||||||||||||||||||| || || ||||||||||||||    
T  68789 gttaaacccgtttttagaatcatataacccattattagagaaaggtagtcccacccttaccttag 68725  T

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Target: scaffold1223 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 170 - 126
Alignment:
Q  5 ccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||| || ||||||||||||||||||||||||||||||    
T  170 ccctcaacttta-atgagtatgcatggactcagcaaccaacaactt 126  T

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Target: scaffold0462 (Bit Score: 34; Significance: 0.0000000004; HSPs: 4)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 437 - 482
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaaca 46  Q
    ||||||| |||||| | |||||||||||||||||||||||||||||    
T  437 caagcccacaacttaatataagtatgcatggactcagcaaccaaca 482  T

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Target: scaffold0462; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5943 - 5988
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaaca 46  Q
    ||||||| |||||| | |||||||||||||||||||||||||||||    
T  5943 caagcccacaacttaatataagtatgcatggactcagcaaccaaca 5988  T

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Target: scaffold0462; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 1275 - 1313
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaaggttaaacc 154  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  1275 ctataacatcaaaactatcaacaactataaggttaaacc 1313  T

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Target: scaffold0462; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 6781 - 6819
Alignment:
Q  116 ctataacatcaaaactaacaacaactacaaggttaaacc 154  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  6781 ctataacatcaaaactatcaacaactataaggttaaacc 6819  T

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Target: scaffold0241 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1464 - 1513
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || |||||||||||||||||||||  |||||||    
T  1464 caagccctcaactttaaatgagtatgcatggactcagcaacttacaactt 1513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 12585 - 12520
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||| | |||||||||||    
T  12585 tttcagaattatacaacttagaattagagaaagttattcccacccttaccttggattagatgatcg 12520  T

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Target: scaffold0059 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 250
Target Start/End: Original strand, 49678 - 49822
Alignment:
Q  106 aacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 205  Q
    ||||||| | ||||||||||||||||| ||||||  | ||  ||||||||||||||||||||||   || ||| |||| |||| | || || ||||||||    
T  49678 aacctaacttctataacatcaaaactatcaacaaaaataaaattaaaccctttttcagaattat-ggactcatgattaaagaaggttagtcccaccctta 49776  T
Q  206 ccttaggttagatgatcgcaaggtcctac-cgctttctcttctctg 250  Q
    |||||| || | ||||  |||||| ||||  |||||||||||||||    
T  49777 ccttagattggttgattacaaggttctacaagctttctcttctctg 49822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4015 - 3963
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaac 54  Q
    |||||||||| ||||| ||  |||||||||||||||||||||||||||||||||    
T  4015 caagccctcatcttta-atgggtatgcatggactcagcaaccaacaactttaac 3963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 31994 - 32059
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || ||||||||||||||||  |||||||||||    
T  31994 tttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaattagatgatcg 32059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 37301 - 37366
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || ||||||||||||||||  |||||||||||    
T  37301 tttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaattagatgatcg 37366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 77687 - 77751
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 222  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| ||||||||||    
T  77687 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattagatgatc 77751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 19220 - 19252
Alignment:
Q  21 agtatgcatggactcagcaaccaacaactttaa 53  Q
    |||||||||||||||||||||||||||||||||    
T  19220 agtatgcatggactcagcaaccaacaactttaa 19252  T

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Target: scaffold0051 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 64989 - 64933
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||| | || ||||||||| |||||| ||||||||||||| ||||||    
T  64989 caagccctcaacttaatatgagtatgcattgactcaacaaccaacaacttaaacaac 64933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 69 - 135
Alignment:
Q  99 aattataaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaa 165  Q
    |||| ||| ||||| | |||||||||||||||||  |||||||||||  | ||||||||||||||||    
T  69 aattttaaccctaacttctataacatcaaaactattaacaactacaaattaaaaccctttttcagaa 135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 211
Target Start/End: Original strand, 555 - 660
Alignment:
Q  105 aaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 204  Q
    |||||||| | |||||||||||||| || ||||||| ||||  ||||||| ||||| |||||||||  || ||| |||| |||| | || || |||||||    
T  555 aaacctaacttctataacatcaaaattatcaacaacaacaaaattaaaccatttttaagaattata-gactcatgattaaagaaggttagtcccaccctt 653  T
Q  205 accttag 211  Q
    |||||||    
T  654 accttag 660  T

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Target: scaffold0112 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 78
Target Start/End: Original strand, 2013 - 2047
Alignment:
Q  44 acaactttaacaacatcgacgacaacaacggcaac 78  Q
    |||||||||||||||| ||||||||||||||||||    
T  2013 acaactttaacaacattgacgacaacaacggcaac 2047  T

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Target: scaffold0112; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 2889 - 2942
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 211  Q
    |||||||||||||||||| |  ||||||||||| || || ||||||||||||||    
T  2889 tttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttag 2942  T

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Target: scaffold1633 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 1205 - 1270
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  1205 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 1270  T

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Target: scaffold0956 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 2555 - 2620
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||| ||| |||||||||||    
T  2555 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccgtagattagatgatcg 2620  T

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Target: scaffold0529 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7410 - 7459
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || ||||||||||||||||| |||  |||||||    
T  7410 caagccctcaactttaaatgagtatgcatggactcagaaacttacaactt 7459  T

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Target: scaffold0165 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 31877 - 31938
Alignment:
Q  105 aaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaat 166  Q
    |||||||| | ||| |||||||||||||  |||||||| ||  |||||||||||||||||||    
T  31877 aaacctaacttctacaacatcaaaactattaacaactataaaattaaaccctttttcagaat 31938  T

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Target: scaffold0065 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 54929 - 54978
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaaccaacaactt 50  Q
    |||||||||||||||| || |||||||||||||||| ||||  |||||||    
T  54929 caagccctcaactttaaatgagtatgcatggactcaacaacttacaactt 54978  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 79049 - 79114
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  79049 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcg 79114  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 78237 - 78172
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  78237 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 78172  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 168
Target Start/End: Original strand, 174199 - 174232
Alignment:
Q  135 aacaactacaaggttaaaccctttttcagaatta 168  Q
    ||||||||||||||||||||||||||||| ||||    
T  174199 aacaactacaaggttaaaccctttttcaggatta 174232  T

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Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 143611 - 143663
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttacctta 210  Q
    |||||||||||||||||  |  ||||||||||| || ||||||||||||||||    
T  143611 tttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 143663  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 24183 - 24118
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 223  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  24183 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 24118  T

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Target: scaffold1695 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 458 - 494
Alignment:
Q  21 agtatgcatggactcagcaaccaacaactttaacaac 57  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  458 agtatgcatggactcaacaaccaacaacttaaacaac 494  T

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Target: scaffold1283 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 520 - 456
Alignment:
Q  158 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 222  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  ||||||||||    
T  520 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatc 456  T

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Target: scaffold0145 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 8085 - 8129
Alignment:
Q  119 taacatcaaaac-taacaacaactacaaggttaaaccctttttca 162  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||    
T  8085 taacatcaaaacctattaacaactacaaggttaaaccctttttca 8129  T

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Target: scaffold0120 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 29272 - 29316
Alignment:
Q  119 taacatcaaaac-taacaacaactacaaggttaaaccctttttca 162  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||    
T  29272 taacatcaaaacctattaacaactacaaggttaaaccctttttca 29316  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28338 - 28378
Alignment:
Q  1 caagccctcaactttagataagtatgcatggactcagcaac 41  Q
    |||||||||||||||| || |||||||||||||||| ||||    
T  28338 caagccctcaactttaaatgagtatgcatggactcaacaac 28378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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