View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9794_low_48 (Length: 229)

Name: NF9794_low_48
Description: NF9794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9794_low_48
NF9794_low_48
[»] chr5 (57 HSPs)
chr5 (1-162)||(40276215-40276379)
chr5 (3-124)||(31080480-31080602)
chr5 (12-130)||(36798167-36798288)
chr5 (1-131)||(37897904-37898035)
chr5 (132-221)||(27481080-27481169)
chr5 (132-220)||(11855914-11856002)
chr5 (132-219)||(6091440-6091527)
chr5 (132-219)||(12970789-12970876)
chr5 (132-219)||(18411934-18412021)
chr5 (1-128)||(27904669-27904798)
chr5 (128-219)||(28429453-28429544)
chr5 (128-219)||(29543270-29543361)
chr5 (1-127)||(3333887-3334015)
chr5 (128-218)||(19065760-19065850)
chr5 (18-130)||(35166294-35166406)
chr5 (146-219)||(40276514-40276586)
chr5 (132-219)||(555965-556052)
chr5 (128-219)||(1664456-1664547)
chr5 (132-219)||(4765819-4765906)
chr5 (132-219)||(8406619-8406706)
chr5 (132-219)||(22936171-22936258)
chr5 (128-219)||(26637276-26637367)
chr5 (1-129)||(12406226-12406356)
chr5 (1-128)||(25910720-25910851)
chr5 (132-219)||(28602281-28602368)
chr5 (132-219)||(36703507-36703594)
chr5 (1-60)||(2974702-2974761)
chr5 (15-129)||(36798376-36798492)
chr5 (1-62)||(9852853-9852914)
chr5 (36-128)||(12406040-12406134)
chr5 (1-62)||(19131686-19131747)
chr5 (13-128)||(35166491-35166608)
chr5 (16-124)||(8284158-8284266)
chr5 (132-219)||(14207080-14207167)
chr5 (128-219)||(27480736-27480827)
chr5 (132-219)||(32535662-32535749)
chr5 (132-218)||(8646649-8646735)
chr5 (71-129)||(19340762-19340821)
chr5 (21-127)||(32391925-32392033)
chr5 (16-124)||(24405493-24405603)
chr5 (70-127)||(25363825-25363882)
chr5 (1-61)||(16132812-16132872)
chr5 (1-131)||(18402982-18403114)
chr5 (1-61)||(26702504-26702563)
chr5 (1-61)||(26972237-26972296)
chr5 (3-126)||(32391720-32391845)
chr5 (128-168)||(43347149-43347189)
chr5 (1-48)||(3999284-3999331)
chr5 (1-125)||(20629930-20630057)
chr5 (12-126)||(39574240-39574353)
chr5 (77-127)||(40132904-40132955)
chr5 (189-219)||(17251539-17251569)
chr5 (70-130)||(3999083-3999144)
chr5 (71-128)||(15204287-15204344)
chr5 (1-42)||(26563075-26563116)
chr5 (3-62)||(6130321-6130381)
chr5 (71-126)||(43098281-43098337)
[»] chr1 (58 HSPs)
chr1 (1-130)||(3377498-3377629)
chr1 (128-219)||(46960354-46960445)
chr1 (132-219)||(52630499-52630586)
chr1 (1-126)||(16874689-16874816)
chr1 (132-219)||(9115563-9115650)
chr1 (132-219)||(25789489-25789576)
chr1 (132-219)||(47031585-47031672)
chr1 (128-219)||(48916277-48916368)
chr1 (12-130)||(17760679-17760801)
chr1 (13-128)||(45738935-45739051)
chr1 (3-127)||(32295141-32295267)
chr1 (132-219)||(1597601-1597688)
chr1 (132-219)||(5806535-5806622)
chr1 (132-219)||(46666434-46666521)
chr1 (128-203)||(52699720-52699795)
chr1 (133-219)||(6911211-6911297)
chr1 (133-219)||(32824647-32824733)
chr1 (132-218)||(51445338-51445424)
chr1 (1-62)||(39642394-39642455)
chr1 (128-219)||(1228134-1228225)
chr1 (140-219)||(20260353-20260432)
chr1 (132-219)||(25473981-25474068)
chr1 (128-219)||(29091398-29091489)
chr1 (140-219)||(32202580-32202659)
chr1 (132-219)||(36361509-36361596)
chr1 (132-219)||(38964938-38965025)
chr1 (132-219)||(50191023-50191110)
chr1 (133-219)||(39930183-39930269)
chr1 (128-219)||(45771818-45771909)
chr1 (1-129)||(7579661-7579792)
chr1 (1-131)||(8301531-8301662)
chr1 (74-131)||(51250481-51250539)
chr1 (132-216)||(5518762-5518846)
chr1 (128-215)||(13653581-13653669)
chr1 (132-219)||(2430223-2430310)
chr1 (71-126)||(5287831-5287887)
chr1 (132-219)||(8331740-8331827)
chr1 (132-219)||(12190436-12190523)
chr1 (70-129)||(50226390-50226450)
chr1 (133-219)||(9832130-9832216)
chr1 (12-104)||(44672339-44672429)
chr1 (1-104)||(50401395-50401498)
chr1 (3-136)||(3377699-3377834)
chr1 (3-128)||(12960845-12960972)
chr1 (1-127)||(14978797-14978924)
chr1 (128-220)||(13932127-13932219)
chr1 (132-219)||(14788449-14788536)
chr1 (128-219)||(24116589-24116680)
chr1 (3-62)||(32295019-32295078)
chr1 (128-218)||(38519315-38519405)
chr1 (141-219)||(52186265-52186343)
chr1 (142-219)||(2632579-2632656)
chr1 (188-218)||(49627301-49627331)
chr1 (1-62)||(15659177-15659238)
chr1 (1-62)||(23220633-23220694)
chr1 (128-219)||(19923718-19923809)
chr1 (76-131)||(43600397-43600453)
chr1 (128-168)||(47677421-47677461)
[»] chr4 (82 HSPs)
chr4 (1-128)||(44356584-44356711)
chr4 (4-128)||(53312285-53312412)
chr4 (1-131)||(12719631-12719764)
chr4 (1-128)||(2836898-2837027)
chr4 (132-219)||(41744480-41744567)
chr4 (128-219)||(45748050-45748141)
chr4 (128-219)||(55968255-55968346)
chr4 (128-219)||(30790277-30790367)
chr4 (1-104)||(20112336-20112439)
chr4 (1-138)||(25909476-25909615)
chr4 (128-217)||(38413907-38413996)
chr4 (1-129)||(2016789-2016919)
chr4 (1-62)||(6207360-6207421)
chr4 (1-127)||(14449470-14449599)
chr4 (128-219)||(10401035-10401126)
chr4 (132-219)||(13230248-13230335)
chr4 (1-128)||(14060889-14061018)
chr4 (13-125)||(21871585-21871696)
chr4 (13-125)||(21927446-21927557)
chr4 (132-219)||(39730552-39730639)
chr4 (132-219)||(39835566-39835653)
chr4 (132-219)||(40435629-40435716)
chr4 (132-219)||(41859305-41859392)
chr4 (132-219)||(43722993-43723080)
chr4 (132-219)||(47670091-47670178)
chr4 (1-130)||(51362533-51362667)
chr4 (1-127)||(10059883-10060013)
chr4 (15-123)||(14060760-14060868)
chr4 (1-128)||(1420730-1420859)
chr4 (132-219)||(8321974-8322061)
chr4 (132-219)||(23686516-23686603)
chr4 (132-219)||(25932170-25932257)
chr4 (132-219)||(27555156-27555243)
chr4 (132-219)||(45595997-45596084)
chr4 (132-215)||(48519150-48519233)
chr4 (128-219)||(51968508-51968599)
chr4 (1-124)||(27978695-27978819)
chr4 (132-214)||(50673163-50673245)
chr4 (13-128)||(8965714-8965825)
chr4 (132-217)||(42773679-42773764)
chr4 (1-51)||(43074774-43074824)
chr4 (36-125)||(1420537-1420627)
chr4 (1-62)||(2654155-2654216)
chr4 (1-62)||(14016792-14016853)
chr4 (75-131)||(19909169-19909226)
chr4 (139-219)||(48873750-48873830)
chr4 (139-219)||(48879054-48879134)
chr4 (71-130)||(21957536-21957596)
chr4 (1-129)||(23759760-23759889)
chr4 (132-219)||(27763158-27763245)
chr4 (132-219)||(31938128-31938215)
chr4 (81-124)||(2180780-2180823)
chr4 (128-219)||(38394636-38394727)
chr4 (1-124)||(47999533-47999657)
chr4 (3-133)||(23759555-23759686)
chr4 (133-214)||(34238214-34238295)
chr4 (1-62)||(21597588-21597649)
chr4 (128-219)||(18405132-18405222)
chr4 (71-126)||(35615315-35615371)
chr4 (70-133)||(53312541-53312605)
chr4 (133-219)||(6280181-6280267)
chr4 (1-124)||(6637249-6637373)
chr4 (134-219)||(7258693-7258778)
chr4 (80-126)||(21957733-21957780)
chr4 (128-178)||(34049852-34049903)
chr4 (70-124)||(50769366-50769421)
chr4 (80-128)||(2017054-2017103)
chr4 (1-50)||(11824267-11824315)
chr4 (129-214)||(12276166-12276250)
chr4 (1-62)||(20118089-20118150)
chr4 (81-129)||(21451457-21451506)
chr4 (20-61)||(29697590-29697631)
chr4 (1-62)||(31553428-31553489)
chr4 (132-216)||(32953255-32953339)
chr4 (75-127)||(43074827-43074880)
chr4 (71-130)||(1186655-1186715)
chr4 (1-61)||(1186874-1186934)
chr4 (156-219)||(18405516-18405579)
chr4 (128-219)||(36860012-36860102)
chr4 (70-129)||(37832953-37833013)
chr4 (80-127)||(52463053-52463101)
chr4 (77-128)||(54855303-54855355)
[»] chr8 (61 HSPs)
chr8 (12-128)||(20853377-20853493)
chr8 (132-219)||(7930964-7931051)
chr8 (132-219)||(35818683-35818770)
chr8 (128-219)||(37982042-37982133)
chr8 (13-128)||(30539189-30539305)
chr8 (132-217)||(10896475-10896560)
chr8 (1-125)||(26823828-26823954)
chr8 (1-62)||(37813277-37813338)
chr8 (132-219)||(16313766-16313853)
chr8 (132-219)||(18297837-18297924)
chr8 (132-219)||(25837636-25837723)
chr8 (132-219)||(26061869-26061956)
chr8 (132-219)||(37392805-37392892)
chr8 (132-219)||(38132997-38133084)
chr8 (128-219)||(43872220-43872311)
chr8 (1-127)||(45177201-45177329)
chr8 (70-127)||(36688253-36688311)
chr8 (19-124)||(37939917-37940021)
chr8 (140-219)||(12710370-12710449)
chr8 (128-215)||(15226695-15226782)
chr8 (132-219)||(18726879-18726966)
chr8 (132-219)||(26602196-26602283)
chr8 (132-219)||(38363806-38363893)
chr8 (35-128)||(32071235-32071326)
chr8 (133-219)||(32661194-32661280)
chr8 (13-131)||(39889971-39890091)
chr8 (1-127)||(6807355-6807480)
chr8 (71-124)||(25896993-25897047)
chr8 (132-220)||(5020750-5020838)
chr8 (128-219)||(3049734-3049825)
chr8 (36-128)||(6807172-6807264)
chr8 (3-62)||(25144130-25144190)
chr8 (128-219)||(25899384-25899475)
chr8 (128-219)||(31117781-31117872)
chr8 (132-219)||(42755592-42755679)
chr8 (133-179)||(35394155-35394202)
chr8 (1-131)||(29044733-29044863)
chr8 (71-128)||(45515932-45515990)
chr8 (1-62)||(16982797-16982857)
chr8 (128-219)||(19160996-19161087)
chr8 (3-93)||(27545544-27545634)
chr8 (15-125)||(29657702-29657817)
chr8 (71-131)||(35213027-35213088)
chr8 (128-219)||(16219196-16219287)
chr8 (15-131)||(17070903-17071020)
chr8 (15-131)||(17577252-17577369)
chr8 (1-129)||(23702321-23702450)
chr8 (70-129)||(44269373-44269433)
chr8 (70-128)||(28349563-28349622)
chr8 (70-126)||(15181640-15181697)
chr8 (12-62)||(21486721-21486771)
chr8 (71-128)||(27545343-27545401)
chr8 (130-219)||(33533649-33533738)
chr8 (13-62)||(3676326-3676375)
chr8 (186-219)||(12649860-12649893)
chr8 (1-50)||(14880414-14880463)
chr8 (71-128)||(34608635-34608692)
chr8 (1-62)||(41487396-41487457)
chr8 (1-62)||(41602549-41602610)
chr8 (128-168)||(33444877-33444917)
chr8 (70-129)||(37263356-37263416)
[»] chr6 (30 HSPs)
chr6 (1-128)||(10727380-10727509)
chr6 (1-128)||(33399785-33399912)
chr6 (1-131)||(6036846-6036976)
chr6 (128-216)||(6706007-6706095)
chr6 (132-220)||(14170739-14170827)
chr6 (5-129)||(30349347-30349472)
chr6 (3-129)||(12766403-12766530)
chr6 (1-128)||(2853601-2853731)
chr6 (127-212)||(12328075-12328158)
chr6 (132-219)||(1316744-1316831)
chr6 (132-219)||(10246375-10246462)
chr6 (128-219)||(14781865-14781955)
chr6 (132-219)||(16968650-16968737)
chr6 (1-62)||(26311590-26311651)
chr6 (132-219)||(2657425-2657512)
chr6 (132-219)||(18897646-18897733)
chr6 (13-123)||(20474903-20475014)
chr6 (3-61)||(6036712-6036770)
chr6 (71-131)||(2203407-2203468)
chr6 (140-219)||(8029028-8029107)
chr6 (133-219)||(7053838-7053924)
chr6 (70-128)||(30349612-30349671)
chr6 (128-216)||(21008234-21008322)
chr6 (79-124)||(32143261-32143306)
chr6 (12-128)||(3579594-3579711)
chr6 (1-61)||(26601528-26601588)
chr6 (1-61)||(32143326-32143386)
chr6 (70-127)||(17248636-17248694)
chr6 (71-131)||(8223987-8224048)
chr6 (131-219)||(9762298-9762386)
[»] chr3 (63 HSPs)
chr3 (1-128)||(51315670-51315799)
chr3 (128-219)||(6832177-6832268)
chr3 (1-128)||(14340920-14341047)
chr3 (1-131)||(38957841-38957974)
chr3 (132-220)||(43719184-43719272)
chr3 (132-219)||(10822976-10823063)
chr3 (132-219)||(11239379-11239466)
chr3 (132-219)||(26848747-26848834)
chr3 (128-219)||(28770464-28770555)
chr3 (132-219)||(33218172-33218259)
chr3 (1-124)||(44585972-44586097)
chr3 (132-219)||(48340016-48340103)
chr3 (14-125)||(22494555-22494667)
chr3 (1-128)||(44433250-44433381)
chr3 (1-62)||(44436584-44436645)
chr3 (132-219)||(8476567-8476654)
chr3 (128-219)||(31436177-31436268)
chr3 (132-219)||(40907991-40908078)
chr3 (132-219)||(43132415-43132502)
chr3 (14-126)||(50802660-50802773)
chr3 (14-126)||(50873104-50873217)
chr3 (128-218)||(6927817-6927907)
chr3 (133-219)||(24574292-24574378)
chr3 (132-218)||(47115116-47115202)
chr3 (1-127)||(54719183-54719309)
chr3 (132-219)||(1098924-1099011)
chr3 (132-219)||(20414724-20414811)
chr3 (128-219)||(24783934-24784025)
chr3 (140-219)||(29512325-29512404)
chr3 (132-219)||(44952033-44952120)
chr3 (15-129)||(25902553-25902669)
chr3 (128-218)||(31611240-31611330)
chr3 (133-219)||(46359677-46359763)
chr3 (1-127)||(38177178-38177304)
chr3 (1-62)||(27178333-27178394)
chr3 (132-216)||(28124695-28124779)
chr3 (128-219)||(27822996-27823087)
chr3 (128-215)||(38140623-38140710)
chr3 (132-219)||(53165983-53166070)
chr3 (39-127)||(3192774-3192862)
chr3 (133-219)||(6231761-6231847)
chr3 (128-219)||(26849400-26849491)
chr3 (15-128)||(25154381-25154496)
chr3 (1-51)||(25843443-25843493)
chr3 (134-215)||(32070999-32071080)
chr3 (15-128)||(3192982-3193096)
chr3 (1-62)||(33329803-33329864)
chr3 (34-126)||(1814773-1814866)
chr3 (128-219)||(12228509-12228600)
chr3 (14-62)||(43747479-43747527)
chr3 (128-168)||(49216076-49216116)
chr3 (71-128)||(14349365-14349423)
chr3 (71-128)||(28204479-28204537)
chr3 (70-127)||(33329611-33329669)
chr3 (1-126)||(54464163-54464290)
chr3 (143-219)||(9320719-9320795)
chr3 (36-129)||(28712683-28712777)
chr3 (186-218)||(2566492-2566524)
chr3 (132-219)||(20297518-20297605)
chr3 (1-94)||(28712489-28712582)
chr3 (3-51)||(28944106-28944154)
chr3 (1-49)||(36677697-36677745)
chr3 (81-124)||(36677783-36677827)
[»] chr2 (78 HSPs)
chr2 (132-219)||(37192247-37192334)
chr2 (1-131)||(14943731-14943861)
chr2 (132-225)||(37233149-37233242)
chr2 (128-219)||(13760692-13760783)
chr2 (132-219)||(17965708-17965795)
chr2 (134-219)||(5003096-5003181)
chr2 (1-130)||(43028791-43028921)
chr2 (128-220)||(3902181-3902273)
chr2 (1-129)||(34679095-34679225)
chr2 (132-219)||(346604-346691)
chr2 (132-219)||(4559284-4559371)
chr2 (132-219)||(6171516-6171603)
chr2 (132-219)||(28311955-28312042)
chr2 (128-219)||(40569743-40569834)
chr2 (1-128)||(5470523-5470650)
chr2 (70-128)||(6592723-6592782)
chr2 (10-129)||(21361879-21361999)
chr2 (1-128)||(25333498-25333626)
chr2 (1-127)||(39918434-39918562)
chr2 (132-217)||(9734105-9734190)
chr2 (10-128)||(14489407-14489525)
chr2 (1-62)||(34760914-34760975)
chr2 (132-216)||(40951118-40951202)
chr2 (132-219)||(2050591-2050678)
chr2 (12-124)||(2609286-2609399)
chr2 (132-219)||(11071330-11071417)
chr2 (132-219)||(14777757-14777844)
chr2 (128-219)||(18713911-18714002)
chr2 (128-219)||(20426737-20426828)
chr2 (132-219)||(37533678-37533765)
chr2 (128-219)||(39819415-39819506)
chr2 (132-219)||(41729389-41729476)
chr2 (1-61)||(44617925-44617985)
chr2 (128-218)||(1623078-1623167)
chr2 (128-218)||(3254347-3254437)
chr2 (133-219)||(5770370-5770456)
chr2 (128-210)||(11763655-11763737)
chr2 (15-128)||(31827524-31827639)
chr2 (128-220)||(14832535-14832627)
chr2 (1-62)||(16043208-16043269)
chr2 (3-132)||(31827721-31827850)
chr2 (1-62)||(37431610-37431671)
chr2 (134-218)||(45693915-45693999)
chr2 (128-219)||(7007310-7007401)
chr2 (1-61)||(8857114-8857174)
chr2 (15-130)||(16043086-16043203)
chr2 (128-219)||(23943888-23943979)
chr2 (132-219)||(42674920-42675007)
chr2 (133-219)||(638319-638405)
chr2 (128-214)||(13539399-13539485)
chr2 (70-128)||(25375129-25375188)
chr2 (3-129)||(43028981-43029109)
chr2 (132-214)||(45408981-45409063)
chr2 (133-218)||(21737668-21737753)
chr2 (1-50)||(6592805-6592854)
chr2 (1-130)||(14489211-14489341)
chr2 (80-128)||(19399441-19399490)
chr2 (1-62)||(32969624-32969685)
chr2 (79-128)||(41196491-41196540)
chr2 (10-62)||(25452-25504)
chr2 (15-127)||(15023039-15023152)
chr2 (70-129)||(21358361-21358421)
chr2 (71-127)||(24498106-24498162)
chr2 (3-62)||(39918629-39918689)
chr2 (3-62)||(5470394-5470453)
chr2 (2-93)||(6510186-6510278)
chr2 (140-218)||(26309993-26310071)
chr2 (132-214)||(27358221-27358303)
chr2 (1-47)||(5008474-5008520)
chr2 (3-128)||(19206141-19206267)
chr2 (1-51)||(24472633-24472683)
chr2 (128-216)||(13790018-13790106)
chr2 (80-128)||(36715560-36715609)
chr2 (128-168)||(4875552-4875592)
chr2 (2-62)||(4925506-4925566)
chr2 (145-216)||(14253254-14253325)
chr2 (70-125)||(18969354-18969410)
chr2 (13-61)||(25411609-25411657)
[»] chr7 (63 HSPs)
chr7 (128-219)||(9947246-9947337)
chr7 (132-219)||(11329718-11329805)
chr7 (1-131)||(28472386-28472515)
chr7 (132-218)||(37534361-37534447)
chr7 (1-128)||(41243643-41243770)
chr7 (19-125)||(47909696-47909803)
chr7 (1-127)||(15029058-15029189)
chr7 (13-130)||(36580473-36580591)
chr7 (1-124)||(18504246-18504371)
chr7 (132-219)||(28904445-28904532)
chr7 (132-219)||(35488448-35488535)
chr7 (1-128)||(15107178-15107304)
chr7 (133-219)||(27214115-27214201)
chr7 (132-218)||(27248019-27248105)
chr7 (133-219)||(33378559-33378645)
chr7 (133-219)||(34930727-34930813)
chr7 (1-124)||(18186637-18186763)
chr7 (1-130)||(28350113-28350244)
chr7 (132-217)||(44819981-44820066)
chr7 (132-216)||(18823890-18823974)
chr7 (128-219)||(6656725-6656817)
chr7 (128-219)||(17276414-17276505)
chr7 (132-219)||(25924896-25924983)
chr7 (128-219)||(27419479-27419570)
chr7 (132-219)||(43948970-43949057)
chr7 (132-219)||(45265307-45265394)
chr7 (132-219)||(48313847-48313934)
chr7 (132-218)||(30686250-30686336)
chr7 (133-219)||(48160833-48160919)
chr7 (1-62)||(3381929-3381989)
chr7 (75-128)||(14247562-14247615)
chr7 (70-128)||(42256581-42256641)
chr7 (3-130)||(4049909-4050038)
chr7 (132-219)||(44565770-44565857)
chr7 (1-129)||(15347952-15348078)
chr7 (128-218)||(31598449-31598539)
chr7 (132-218)||(45045352-45045438)
chr7 (133-219)||(48341089-48341174)
chr7 (1-128)||(20184915-20185045)
chr7 (70-123)||(21505873-21505927)
chr7 (1-128)||(28785941-28786072)
chr7 (36-124)||(6792017-6792107)
chr7 (1-46)||(8073957-8074002)
chr7 (3-129)||(15348145-15348274)
chr7 (70-130)||(19644800-19644858)
chr7 (132-216)||(39553910-39553994)
chr7 (3-104)||(5172711-5172815)
chr7 (14-130)||(14247291-14247408)
chr7 (3-130)||(20185104-20185232)
chr7 (128-215)||(22156433-22156520)
chr7 (128-215)||(22212348-22212435)
chr7 (71-131)||(35250374-35250434)
chr7 (80-127)||(36903533-36903581)
chr7 (144-219)||(45448667-45448742)
chr7 (80-127)||(12905792-12905839)
chr7 (70-124)||(20505101-20505156)
chr7 (140-217)||(38543920-38543998)
chr7 (71-128)||(3318317-3318375)
chr7 (1-62)||(6726441-6726501)
chr7 (1-62)||(9500087-9500148)
chr7 (132-216)||(25097796-25097881)
chr7 (1-50)||(36903341-36903390)
chr7 (132-168)||(40212665-40212701)
[»] scaffold0248 (1 HSPs)
scaffold0248 (1-124)||(405-531)
[»] scaffold0006 (2 HSPs)
scaffold0006 (132-219)||(201651-201738)
scaffold0006 (128-215)||(143342-143430)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-124)||(9415-9539)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-104)||(145377-145481)
[»] scaffold0025 (2 HSPs)
scaffold0025 (2-62)||(19216-19276)
scaffold0025 (73-124)||(19600-19652)
[»] scaffold0515 (1 HSPs)
scaffold0515 (70-128)||(3638-3697)
[»] scaffold0306 (1 HSPs)
scaffold0306 (70-128)||(3638-3697)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-62)||(76929-76989)
[»] scaffold0702 (1 HSPs)
scaffold0702 (132-219)||(3824-3911)
[»] scaffold0662 (1 HSPs)
scaffold0662 (132-219)||(4191-4278)
[»] scaffold1458 (1 HSPs)
scaffold1458 (70-128)||(1470-1529)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-131)||(19910-20041)
[»] scaffold0578 (1 HSPs)
scaffold0578 (1-47)||(3157-3203)
[»] scaffold0372 (1 HSPs)
scaffold0372 (81-129)||(122-171)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-61)||(46261-46321)


Alignment Details
Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 40276215 - 40276379
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn--cttagggggtcaaaatcgcaactttgaaa 98  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||         |||||||||| |||||||||| ||||  |    
T  40276215 tcaaaattagccttgggggtcaaaattgccacatatgcaaaacttaggggacggttttgtagtttttttttcttagggggttaaaatcgcaaatttggga 40276314  T
Q  99 aagttatgggg-taaaactgctattaagccttttctaaataccttggaataaatttctcatcttt 162  Q
    |||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40276315 aagttagggggataaaactgctattaagccttttctaaataacttggaataaatttctcatcttt 40276379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 31080602 - 31080480
Alignment:
Q  3 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagt 102  Q
    |||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||        ||||| ||||||||||||||||||| ||||||    
T  31080602 aaaattggccttgggggccaaaactgccacagatgcaaaacttagggggtggttttgtagttttttttttaggaggtcaaaatcgcaactttggaaaagt 31080503  T
Q  103 ta-tggggtaaaactgctattaa 124  Q
    ||  ||| |||||||| ||||||    
T  31080502 tagagggctaaaactgatattaa 31080480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 36798288 - 36798167
Alignment:
Q  12 cttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggg- 108  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||         ||||||||| |||||| ||||||||| |||||||| |||     
T  36798288 cttgggggccaaaactgccacagatgcaaaacttagggggtggttttgtagtttttttttcttagggggccaaaattgcaactttggaaaagttaagggt 36798189  T
Q  109 gtaaaactgctattaagccttt 130  Q
     |||||||||||||||||||||    
T  36798188 ctaaaactgctattaagccttt 36798167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 37897904 - 37898035
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| | ||||| |||||||| ||||||| ||||||||||||||||  ||||||||||        ||||||||| ||||||||||||||||||||    
T  37897904 tcaaaattggtcttggaggccaaaactgccacatatgcaaaacttaggggc-ggttttgtagttttttttcttagggggccaaaatcgcaactttgaaaa 37898002  T
Q  100 agttatgggg-taaaactgctattaagcctttt 131  Q
    ||||| |||| |||||||||||||||| |||||    
T  37898003 agttagggggctaaaactgctattaaggctttt 37898035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 27481169 - 27481080
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacacag 221  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||||    
T  27481169 ctaaattccttggaataaaattctcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacacag 27481080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 11855914 - 11856002
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacaca 220  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| ||||||||||||||||    
T  11855914 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacaca 11856002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 6091527 - 6091440
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  6091527 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 6091440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 12970789 - 12970876
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | ||||||||||||| |||| |||||||||||||||    
T  12970789 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctagaaataaatttgataaacttgaaacaaacacac 12970876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 18412021 - 18411934
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  18412021 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 18411934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 27904669 - 27904798
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| | |||||||| ||||| |||||||  |||||||||||||||| ||||||||||        |||| |||| ||||||||||||||||||||    
T  27904669 tcaaaattggtcttgggggacaaaactgccacaagtgcaaaacttagggggcggttttgtagttttttttcttacggggccaaaatcgcaactttgaaaa 27904768  T
Q  100 agtta-tggggtaaaactgctattaagcct 128  Q
    |||||  ||| |||||||||||||||||||    
T  27904769 agttagagggctaaaactgctattaagcct 27904798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 28429544 - 28429453
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||| ||||||| |||||||||| ||| |||||||||||| ||||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  28429544 ttttttaaatactttggaataaaattcacatctttatatttcaaggaatgtt-atttctagaaataaatttggtaaacttgaaacaaacacac 28429453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 29543270 - 29543361
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  29543270 ttttctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 29543361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 3333887 - 3334015
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaa 99  Q
    ||||||||  ||||||||||||||| ||||||| |||||||||||| || | ||||||||||        ||||||||| |||||||||||||||| |||    
T  3333887 tcaaaattgaccttgggggccaaaactgccacatatgcaaaacttatggagcggttttgtagtttttcttcttagggggccaaaatcgcaactttggaaa 3333986  T
Q  100 agttatgggg-taaaactgctattaagcc 127  Q
    ||||| |||| ||||||| ||||||||||    
T  3333987 agttagggggctaaaactactattaagcc 3334015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 19065760 - 19065850
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    |||||||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| ||||||||||||||    
T  19065760 ttttctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacaca 19065850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 35166406 - 35166294
Alignment:
Q  18 ggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaactg 117  Q
    ||||||||  ||||||  |||||||||||||||| | ||||||||       ||||||||||||||||||||| |||| ||||||||  || ||||||||    
T  35166406 ggccaaaaccgccacatgtgcaaaacttagggggcgattttgtagtttttttcttagggggtcaaaatcgcaattttggaaaagttaaaggctaaaactg 35166307  T
Q  118 ctattaagccttt 130  Q
    |||||||||||||    
T  35166306 ctattaagccttt 35166294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 40276514 - 40276586
Alignment:
Q  146 ataaatttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||| |||||||||||||||||||||| |||||||||  ||||||||| ||||| |||||||||||||||    
T  40276514 ataaatttatcatctttatattcaaggaatg-ttattaccaagaataaatttagtaaacttgaaacaaacacac 40276586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 555965 - 556052
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  555965 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 556052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 1664547 - 1664456
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||||||||| |||||| |||||||||||||| |||||| |||  |||||  ||| ||||||||||||||| |||||||||||||||    
T  1664547 ttttctaaataccttgaaataaaattctcatctttatatttcaagaaat-attattctcaggaataaatttggtaaacttgaaacaaacacac 1664456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 4765819 - 4765906
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||| ||||||| ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  4765819 ctaaattccttagaataaaattctcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 4765906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 8406706 - 8406619
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | ||||||||||||| |||| |||||||||||||||    
T  8406706 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctagaaataaatttgataaacttgaaacaaacacac 8406619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 22936171 - 22936258
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  22936171 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 22936258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 26637276 - 26637367
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||| | | ||||||||||| |||| |||||| ||||||||    
T  26637276 ttttctaaataccttggaataaaattcccatctttatattccaaggaatg-ttattcctaaaaataaatttgataaacttgaaataaacacac 26637367  T

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Target: chr5; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 12406226 - 12406356
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaactttgaaa 98  Q
    |||||||| |||||||||||||||| ||||||| ||| ||||||||||||| |||||||| |         |||| |||| ||||||| |||||||||||    
T  12406226 tcaaaattggccttgggggccaaaactgccacagatgtaaaacttagggggcggttttgttgtttttttttctta-ggggccaaaatctcaactttgaaa 12406324  T
Q  99 aagttatgggg-taaaactgctattaagcctt 129  Q
    |||||| |||| ||||| ||||||||||||||    
T  12406325 aagttagggggctaaaattgctattaagcctt 12406356  T

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Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 25910851 - 25910720
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn----cttagggggtcaaaatcgcaactttga 96  Q
    ||||||||  ||||||||||||||| |||||||  ||||||| |||| ||||||||||||||           ||||||||| ||||||| ||||||| |    
T  25910851 tcaaaattgaccttgggggccaaaactgccacaggtgcaaaatttagagggtggttttgtagtttttgtttttcttagggggccaaaatcacaactttaa 25910752  T
Q  97 aaaagttatggggtaaaactgctattaagcct 128  Q
     ||||||| |||||||||||| ||||||||||    
T  25910751 gaaagttagggggtaaaactgttattaagcct 25910720  T

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Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 28602368 - 28602281
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||  |||||||||||| |||||||||| ||| | | |||||||||||||||| |||||||||||||||    
T  28602368 ctaaattccttggaataaaattcctatctttatattccaaggaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 28602281  T

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Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 36703594 - 36703507
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| ||||| |||||| |||||||||||| |||| |||||||||| ||| | |  |||||||||||||||||||||||||||||||    
T  36703594 ctaaattccttgaaataaaattctcatctttaaattccaaggaatgtt-attcctatgaataaatttggtaaatttgaaacaaacacac 36703507  T

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Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2974761 - 2974702
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgt 60  Q
    |||||||| || ||||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  2974761 tcaaaattggcattgggggccaaaactgccacagatgcaaaacttagggggcggttttgt 2974702  T

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Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 36798376 - 36798492
Alignment:
Q  15 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taa 112  Q
    ||||||||||| ||| |||  |||||||||||||||| ||||||| ||        ||||||||  ||||||||||||||||| ||||||| |||| |||    
T  36798376 gggggccaaaactgctacagttgcaaaacttagggggcggttttgcagttttttttcttaggggaccaaaatcgcaactttgagaaagttagggggctaa 36798475  T
Q  113 aactgctattaagcctt 129  Q
    |||||||||||||||||    
T  36798476 aactgctattaagcctt 36798492  T

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Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9852914 - 9852853
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| |||||||| ||||||| ||||||| ||||||||||||||||| | ||||||||    
T  9852914 tcaaaattggccttgggagccaaaactgccacagatgcaaaacttagggggcgattttgtag 9852853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 12406134 - 12406040
Alignment:
Q  36 tgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 128  Q
    |||||||||||||||| ||||||||||        ||||||||| ||||||||||||||||  ||||||| |||| |||||||||||||||||||    
T  12406134 tgcaaaacttagggggcggttttgtagttttctttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 12406040  T

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Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19131686 - 19131747
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| ||||| |||||||||| || |||| ||||||||||||||||| ||||||||||    
T  19131686 tcaaaattggccttcggggccaaaactgtcacagatgcaaaacttagggggcggttttgtag 19131747  T

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Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 35166491 - 35166608
Alignment:
Q  13 ttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg--t 110  Q
    ||||||||||||| ||| |||  |||||||||||||||||| ||||||||       ||||||||  |||||||||||||| |  ||||||| ||||       
T  35166491 ttgggggccaaaactgctacagctgcaaaacttagggggtgattttgtagtttttttcttaggggaccaaaatcgcaacttcgtgaaagttaggggggcg 35166590  T
Q  111 aaaactgctattaagcct 128  Q
    ||||||||||||||||||    
T  35166591 aaaactgctattaagcct 35166608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 8284266 - 8284158
Alignment:
Q  16 ggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaa 114  Q
    |||| ||||| ||||||| |||||||||||||| |||||| ||||||        ||||| || |||||||||||||||| ||||||||||||| |||||    
T  8284266 gggggcaaaactgccacagatgcaaaacttaggaggtggtattgtagttttttt-ttaggaggccaaaatcgcaactttggaaaagttatggggttaaaa 8284168  T
Q  115 ctgctattaa 124  Q
     |||||||||    
T  8284167 ttgctattaa 8284158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 14207080 - 14207167
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| ||||| |||||| |||||||||||||||| ||| ||||| ||||| | || ||||||||| ||||| |||||||||||||||    
T  14207080 ctaaattccttgaaataaaattctcatctttatattccaatgaatg-ttattcctaggaataaattttgtaaacttgaaacaaacacac 14207167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 27480827 - 27480736
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||||||||| |||||| |||||||||||||| |||||| |||  ||||| | | |||||||||||||||| || ||| ||||||||    
T  27480827 ttttctaaataccttgaaataaaattctcatctttatatttcaagaaat-attattcctaaaaataaatttggtaaacttaaaataaacacac 27480736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 32535749 - 32535662
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| ||||||| |||| ||| ||||||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  32535749 ctaaattccttggattaaaattcccatctttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 32535662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 8646649 - 8646735
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    |||||| |||||||||||| |||  |||||||||||| |||||||||| ||| | || ||||||||| ||||| ||||||||||||||    
T  8646649 ctaaattccttggaataaaattcctatctttatattccaaggaatgtt-attcctaggaataaatttagtaaacttgaaacaaacaca 8646735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 19340821 - 19340762
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctt 129  Q
    |||||||||||||||||||| |||| |||||||| |||| ||||||||||||||| ||||    
T  19340821 ttagggggtcaaaatcgcaattttggaaaagttagggggctaaaactgctattaaacctt 19340762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 32391925 - 32392033
Alignment:
Q  21 caaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatgg-ggtaaaactgc 118  Q
    ||||| || ||||||||||||||||| |||| ||||||||||        |||||||||  |||||||||||||||||||||||| || | |||||| ||    
T  32391925 caaaactgtcacacatgcaaaacttaaggggcggttttgtagttttttttcttagggggctaaaatcgcaactttgaaaaagttagggagttaaaacagc 32392024  T
Q  119 tattaagcc 127  Q
    |||||||||    
T  32392025 tattaagcc 32392033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 24405603 - 24405493
Alignment:
Q  16 ggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatggg-gtaaa 113  Q
    |||||||||| ||||| | |||||||||||||  || ||||||||||        || |||| ||||||||||||||||||||||||||| |||  ||||    
T  24405603 ggggccaaaactgccaaagatgcaaaacttagttggcggttttgtagttttttttctcagggagtcaaaatcgcaactttgaaaaagttaggggactaaa 24405504  T
Q  114 actgctattaa 124  Q
    |||||||||||    
T  24405503 actgctattaa 24405493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 25363882 - 25363825
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcc 127  Q
    |||||| || ||||||| ||||||| ||||||||| ||| ||||||||||||||||||    
T  25363882 cttaggaggccaaaatcacaactttaaaaaagttaggggctaaaactgctattaagcc 25363825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16132872 - 16132812
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 61  Q
    |||||||| ||||||||| |||||| ||||| |  |||||||||||||||| |||||||||    
T  16132872 tcaaaattggccttggggaccaaaactgccataggtgcaaaacttagggggcggttttgta 16132812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18403114 - 18402982
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaactttgaaa 98  Q
    |||||||| | |||||||| ||||| ||||| | ||||||||||||||| ||| ||||||||         ||||| ||| ||||||  |||||||||||    
T  18403114 tcaaaattggtcttgggggtcaaaactgccagagatgcaaaacttagggagtgattttgtagtttttttttcttagagggccaaaattacaactttgaaa 18403015  T
Q  99 aagttatggggtaaaactgctattaagcctttt 131  Q
    || ||| ||| ||||||| ||||||| ||||||    
T  18403014 aaattaggggttaaaactactattaaacctttt 18402982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26702563 - 26702504
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 61  Q
    |||||||| | |||||||||||||| ||||||| ||||||||||| ||||| |||||||||    
T  26702563 tcaaaattggtcttgggggccaaaactgccacaaatgcaaaactt-gggggcggttttgta 26702504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26972296 - 26972237
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 61  Q
    |||||||| | |||||||||||||| ||||||| ||||||||||| ||||| |||||||||    
T  26972296 tcaaaattggtcttgggggccaaaactgccacaaatgcaaaactt-gggggcggttttgta 26972237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 32391845 - 32391720
Alignment:
Q  3 aaaattagccttggggg-ccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaag 101  Q
    |||||| |||||||||| |||||| ||| |||  |||||||||||||||||| ||||||||       |||| |||| ||||||| |||||| |  ||||    
T  32391845 aaaattggccttggggggccaaaactgctacagttgcaaaacttagggggtgattttgtagtttttttcttaaggggccaaaatcacaacttcgtgaaag 32391746  T
Q  102 ttatgggg-taaaactgctattaagc 126  Q
    ||| ||||  ||||||||||||||||    
T  32391745 ttaaggggcgaaaactgctattaagc 32391720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 43347149 - 43347189
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc 168  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  43347149 ttttctaaataccttagaataaacttctcatctttatattc 43347189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3999284 - 3999331
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagg 48  Q
    |||||||| |||||||||||||||| ||||||| ||| ||||||||||    
T  3999284 tcaaaattggccttgggggccaaaactgccacatatgtaaaacttagg 3999331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 20629930 - 20630057
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| | | ||| |||||||| | ||||| ||||||||||||||||| ||||||||||        |||| |||| ||||||| |||||||| |||    
T  20629930 tcaaaattggtcctggaggccaaaacttccacaaatgcaaaacttagggggcggttttgtagttttttttcttaaggggccaaaatcacaactttggaaa 20630029  T
Q  100 agttatg--gggtaaaactgctattaag 125  Q
    ||||| |  || ||||||||||||||||    
T  20630030 agttagggaggctaaaactgctattaag 20630057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 39574353 - 39574240
Alignment:
Q  12 cttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagtta-tggggt 110  Q
    |||||||||||||| |||||||  |||||||||||||||||| |||| |||       ||||||| | |||||||||||||| |  |||||||  |||      
T  39574353 cttgggggccaaaactgccaca--tgcaaaacttagggggtgattttatagtttttttcttagggagccaaaatcgcaacttcgtgaaagttagagggcg 39574256  T
Q  111 aaaactgctattaagc 126  Q
    ||||||||||||||||    
T  39574255 aaaactgctattaagc 39574240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 40132955 - 40132904
Alignment:
Q  77 ggtcaaaatcgcaactttgaaaaagtta-tggggtaaaactgctattaagcc 127  Q
    ||||||||||||||||||||||||||||  ||  ||||||||||||||||||    
T  40132955 ggtcaaaatcgcaactttgaaaaagttagaggactaaaactgctattaagcc 40132904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 219
Target Start/End: Complemental strand, 17251569 - 17251539
Alignment:
Q  189 aataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||||||||||||||||||||||||    
T  17251569 aataaatttggtaaatttgaaacaaacacac 17251539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 3999144 - 3999083
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagccttt 130  Q
    |||||||||||||||||||||||| |  ||||||| ||||  |||||||||||||| |||||    
T  3999144 cttagggggtcaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 3999083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 15204287 - 15204344
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcct 128  Q
    |||||||||||||||||||||||| | ||||||| |||  |||| ||| |||||||||    
T  15204287 ttagggggtcaaaatcgcaacttttagaaagttaggggtcaaaagtgcaattaagcct 15204344  T

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Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 26563116 - 26563075
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaa 42  Q
    ||||||||  ||||||||||||||||||||||| ||||||||    
T  26563116 tcaaaattgaccttgggggccaaaattgccacagatgcaaaa 26563075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 6130381 - 6130321
Alignment:
Q  3 aaaattagccttggggg-ccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||| |||||||||| |||||| ||| |||  ||||||||||||||| |||||||||||    
T  6130381 aaaattggccttggggggccaaaactgctacagttgcaaaacttaggggatggttttgtag 6130321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 43098281 - 43098337
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatggg-gtaaaactgctattaagc 126  Q
    ||||||||  ||||||| |||||||||||||||| |||  |||||||||||||||||    
T  43098281 ttagggggcaaaaatcgtaactttgaaaaagttaggggactaaaactgctattaagc 43098337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 6e-30; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 3377629 - 3377498
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||        ||||||||| |||||||||||||||| |||    
T  3377629 tcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttggaaa 3377530  T
Q  100 agttatgggg-taaaactgctattaagccttt 130  Q
    ||||| |||| |||||||||||||||||||||    
T  3377529 agttagggggctaaaactgctattaagccttt 3377498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 46960445 - 46960354
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||| | || |||||||||| ||||||||||||||||||||    
T  46960445 ttttctaaatatcttggaataaatttctcatctttatattccaaagaatg-ttattcctaggaataaatttgataaatttgaaacaaacacac 46960354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 52630586 - 52630499
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  52630586 ctaaattccttggaataaaattctcatctttatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 52630499  T

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Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 16874689 - 16874816
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggt-caaaatcgcaactttgaaaa 99  Q
    |||||||| |||||||| ||||||| ||||||| |||||||||||| |||| ||||||||||       ||||| |||| |||||| |||||||||| ||    
T  16874689 tcaaaattggccttgggagccaaaactgccacagatgcaaaacttatggggcggttttgtagtttttttcttagagggtccaaaattgcaactttgagaa 16874788  T
Q  100 agttatgggg-taaaactgctattaagc 126  Q
    ||||| |||| |||||||||||||||||    
T  16874789 agttagggggttaaaactgctattaagc 16874816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 9115650 - 9115563
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  9115650 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 9115563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 25789576 - 25789489
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | ||||||||||||| |||| |||||||||||||||    
T  25789576 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctagaaataaatttgataaacttgaaacaaacacac 25789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 47031672 - 47031585
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  47031672 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 47031585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 48916277 - 48916368
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| | |  |||||||||| |||| |||||||||||||||    
T  48916277 ttttctaaataccttggaataaaattctcatctttatattctaaggaatg-ttattcctaagaataaatttgataaacttgaaacaaacacac 48916368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 17760801 - 17760679
Alignment:
Q  12 cttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag---nnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggg 108  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||||||||          ||||||||| |||||||||||||||||  |||||| |||    
T  17760801 cttggtggccaaaactgccacatatgcaaaacttagggggtggttttgtagttttttttttcttagggggccaaaatcgcaactttgaggaagttagggg 17760702  T
Q  109 g-taaaactgctattaagccttt 130  Q
    | |||| ||||||||||||||||    
T  17760701 gctaaagctgctattaagccttt 17760679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 45739051 - 45738935
Alignment:
Q  13 ttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgg-ggta 111  Q
    ||||||||||||| ||||| | |||||||||||| |||| ||||||||||       ||||||||||||||||| ||||||||| ||||||| || | ||    
T  45739051 ttgggggccaaaactgccatagatgcaaaacttaaggggcggttttgtagttttttccttagggggtcaaaatcacaactttgagaaagttagggagtta 45738952  T
Q  112 aaactgctattaagcct 128  Q
    ||| |||||||||||||    
T  45738951 aaattgctattaagcct 45738935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 32295141 - 32295267
Alignment:
Q  3 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaag 101  Q
    |||||| || ||||||||||||| || |||| ||| |||||||||| ||||||||||||         ||||||||||||||||||||||||||||||||    
T  32295141 aaaattggctttgggggccaaaactgtcacaaatgtaaaacttaggtggtggttttgtaattttttttcttagggggtcaaaatcgcaactttgaaaaag 32295240  T
Q  102 -ttatggggtaaaactgctattaagcc 127  Q
     ||| ||| ||||||| ||||||||||    
T  32295241 tttaggggctaaaactcctattaagcc 32295267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 1597601 - 1597688
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||||| ||| | | |||||||||||||||| |||||||||||||||    
T  1597601 ctaaattccttggaataaaattcccatctttatatttcaaggaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 1597688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 5806535 - 5806622
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  5806535 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 5806622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 46666521 - 46666434
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||| ||||||| ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  46666521 ctaaattccttagaataaaattctcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 46666434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 52699720 - 52699795
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaa 203  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| | || |||||||||||||||    
T  52699720 ttttctaaataccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaa 52699795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 6911297 - 6911211
Alignment:
Q  133 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  6911297 taaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 6911211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 32824733 - 32824647
Alignment:
Q  133 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||| |||||||||||||||||||||    
T  32824733 taaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttcgtaaatttgaaacaaacacac 32824647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 51445338 - 51445424
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    |||||| |||||||||||| ||||||||| ||||||| |||||||||| ||| | || ||||||||||||||| ||||||||||||||    
T  51445338 ctaaattccttggaataaaattctcatctatatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacaca 51445424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39642394 - 39642455
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| || ||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  39642394 tcaaaattggctttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtag 39642455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 1228134 - 1228225
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||| | |||||||||| |||||||||||||||| ||||||| | |||||   |||||||||||||||||| || ||||||||||||    
T  1228134 ttttctaaattctttggaataaaattctcatctttatattccaaggaa-ggttattcatagaaataaatttggtaaacttaaaacaaacacac 1228225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 20260353 - 20260432
Alignment:
Q  140 cttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  20260353 cttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 20260432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 25474068 - 25473981
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| | |||||||||| |||||||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  25474068 ctaaattctttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 25473981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 29091489 - 29091398
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||| |||||||||||||||||| ||| |||||||||| || |||||||| ||||| | |  ||||||||||||||| |||||||||||||||    
T  29091489 ttttataaataccttggaataaaattcccatctttatattttaaggaatg-ttattcctaagaataaatttggtaaacttgaaacaaacacac 29091398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 32202580 - 32202659
Alignment:
Q  140 cttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||| | | ||||||||||| |||| |||||||||||||||    
T  32202580 cttggaataaaattctcatctttatattccaaggaatg-ttattcctaaaaataaatttgataaacttgaaacaaacacac 32202659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 36361596 - 36361509
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||| ||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  36361596 ctaaattccttggaataaaattcccatttttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 36361509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 38964938 - 38965025
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| || ||||||||||||    
T  38964938 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttaaaacaaacacac 38965025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 50191023 - 50191110
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| ||| | |||||| ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  50191023 ctaaattcctcgaaataaaattctcatctttatattctaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 50191110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 39930269 - 39930183
Alignment:
Q  133 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| ||| ||||||||||||| || ||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  39930269 taaattccttggaataaaattcccatctttatattccaaagaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 39930183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 45771909 - 45771818
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||||||| |||||| |||||| ||| | ||| | |||||    | ||||||||||||||| |||||||||||||||    
T  45771909 ttttctaaataccttggaataaaattctcacctttatgttccaagaaaggttattcatgggaataaatttggtaaacttgaaacaaacacac 45771818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 7579792 - 7579661
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnnctta-gggggtcaaaatcgcaactttgaaa 98  Q
    ||||||||||| |||||||| ||||||||||||  |||||||||||| ||| ||||||||||        |||| ||||| |||||||||||||||   |    
T  7579792 tcaaaattagctttgggggcaaaaattgccacaagtgcaaaacttagcgggcggttttgtagttttttttcttaggggggccaaaatcgcaacttttgga 7579693  T
Q  99 aagttatgggg-taaaactgctattaagcctt 129  Q
    |||||| |||| ||||||||||||||| ||||    
T  7579692 aagttaaggggttaaaactgctattaaacctt 7579661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 8301531 - 8301662
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| | |||||||| ||||| ||||||| |||||||| |||||||  ||||||||||        ||||| |||||||||| | ||||||| |||    
T  8301531 tcaaaattggtcttgggggtcaaaactgccacagatgcaaaatttaggggacggttttgtagtttttattcttagagggtcaaaattgaaactttggaaa 8301630  T
Q  100 agttatggggtaaaactgctattaagcctttt 131  Q
    | ||| ||| ||||||||||||||| ||||||    
T  8301631 aattaggggctaaaactgctattaaacctttt 8301662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 51250539 - 51250481
Alignment:
Q  74 gggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctttt 131  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||| |||||||||||||    
T  51250539 gggggccaaaatcgcaactttgaaaaagttagggggctaaaactgttattaagcctttt 51250481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 5518762 - 5518846
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 216  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||| ||||| | |  ||||||||||||||| || |||||||||    
T  5518762 ctaaataccttggaataaaattcccatctttatattccaaggaatg-ttattccaatgaataaatttggtaaacttcaaacaaaca 5518846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 13653669 - 13653581
Alignment:
Q  128 ttttctaaataccttggaataaat-ttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 215  Q
    ||||| |||||||||| ||||||  ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||    
T  13653669 ttttccaaataccttgaaataaaaattctcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaac 13653581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 2430310 - 2430223
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||| | ||||| | || ||||||||| ||||| |||||||||||||||    
T  2430310 ctaaattccttggaataaaattcccatctttatattccaaggaacg-ttattcctaggaataaatttagtaaacttgaaacaaacacac 2430223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 5287831 - 5287887
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagc 126  Q
    |||||||| ||||||||||||||||| ||||||| |||| |||||||||||||||||    
T  5287831 ttagggggccaaaatcgcaactttgagaaagttaaggggttaaaactgctattaagc 5287887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 8331827 - 8331740
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| | |||||||||| ||| ||||||||||||| |||||||||| ||| | || |||||||||| |||| |||||||||||||||    
T  8331827 ctaaattctttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttgataaacttgaaacaaacacac 8331740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 12190436 - 12190523
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| |||||   || |||||||||| |||| |||||||||||||||    
T  12190436 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcttaggaataaatttgataaacttgaaacaaacacac 12190523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 50226450 - 50226390
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctt 129  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||  ||||||||||    
T  50226450 cttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgtaattaagcctt 50226390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 9832130 - 9832216
Alignment:
Q  133 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| ||| |||||||||||| | ||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  9832130 taaattccttggaataaaattcccatctttatattccgaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 9832216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 44672429 - 44672339
Alignment:
Q  12 cttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagtta 104  Q
    |||||| ||||||| ||||||| ||||||||||||||||| |||||||||         |||||||||||||||| ||||||||| |||||||    
T  44672429 cttgggcgccaaaactgccacatatgcaaaacttagggggcggttttgta--atttttgttagggggtcaaaatcacaactttgagaaagtta 44672339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 50401498 - 50401395
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| ||||||||| |||||| || |||| ||||||||||||||||| ||||||||||        ||||||||  ||||||||||| ||||||||    
T  50401498 tcaaaattggccttgggg-ccaaaactgtcacaaatgcaaaacttagggggcggttttgtagttatatttcttaggggaccaaaatcgcaattttgaaaa 50401400  T
Q  100 agtta 104  Q
    |||||    
T  50401399 agtta 50401395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 3377699 - 3377834
Alignment:
Q  3 aaaattagccttgg-gggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaag 101  Q
    |||||| ||||||| ||||||||| ||| | |  |||||||||||||||  ||||||||||       | ||||||| ||||||| ||||||||  ||||    
T  3377699 aaaattggccttggagggccaaaactgctaaagttgcaaaacttaggggacggttttgtagtttttttcctagggggccaaaatcacaactttgggaaag 3377798  T
Q  102 ttatgggg-taaaactgctattaagccttttctaaa 136  Q
    ||| |||| |||||||||||||||||| || |||||    
T  3377799 ttagggggctaaaactgctattaagccattcctaaa 3377834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 12960972 - 12960845
Alignment:
Q  3 aaaattagccttggggg-ccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaag 101  Q
    ||||||||||||||||| |||||| ||| | |  ||||||||||||| || ||||||||||        || || || ||||||||||||||||||||||    
T  12960972 aaaattagccttggggggccaaaactgctatagttgcaaaacttaggaggcggttttgtagttttttttttgggaggccaaaatcgcaactttgaaaaag 12960873  T
Q  102 tta-tggggtaaaactgctattaagcct 128  Q
    |||  ||| |||||||| ||||||||||    
T  12960872 ttagcgggctaaaactgttattaagcct 12960845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14978924 - 14978797
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| ||||| |||||||||| | |||||  ||||||||||||||||  |||||||||        | | ||   |||||||||||||||| ||||    
T  14978924 tcaaaattggcctttggggccaaaactaccacaggtgcaaaacttagggggcagttttgtagtttttttttgaaggacccaaaatcgcaactttggaaaa 14978825  T
Q  101 gttatgggg-taaaactgctattaagcc 127  Q
    |||| |||| ||||||||||||||||||    
T  14978824 gttagggggctaaaactgctattaagcc 14978797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 13932127 - 13932219
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacaca 220  Q
    |||||| ||||||||| |||||| ||  |||||||||||| ||| ||||||| ||| |  |||||||||||| |||| ||||||||||||||||    
T  13932127 ttttctgaataccttgaaataaagtttccatctttatatttcaatgaatgtt-attccttgaaataaatttgataaacttgaaacaaacacaca 13932219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 14788536 - 14788449
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| ||||| |||||| ||| ||||||||||||| |||||||||| ||| | |  ||||||||||||||| || ||||||||||||    
T  14788536 ctaaattccttgaaataaaattcccatctttatattccaaggaatgtt-attcctaagaataaatttggtaaacttaaaacaaacacac 14788449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 24116589 - 24116680
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||| |||||||| |||||| ||||||||||||||||| |||||||| |||||   |  |||||||||| |||| || ||||||||||||    
T  24116589 ttttctatataccttgaaataaaattctcatctttatattctaaggaatg-ttattcttaagaataaatttgttaaacttaaaacaaacacac 24116680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 32295078 - 32295019
Alignment:
Q  3 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||| |||||| ||||||||| ||| |||  ||||||||||||| |||||||||||||    
T  32295078 aaaattggccttgtgggccaaaactgctacaattgcaaaacttaggaggtggttttgtag 32295019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 38519315 - 38519405
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    |||||||||||| |||||||||| || |||| ||||| ||| ||  |||||| ||| | |  ||||||||||||||||||||||||||||||    
T  38519315 ttttctaaatacattggaataaaattttcatttttatgttccaaaaaatgtt-attcctacgaataaatttggtaaatttgaaacaaacaca 38519405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 52186265 - 52186343
Alignment:
Q  141 ttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||| |||||||||||||||| ||||||||| ||||| |   |||||||||||||||| || ||||||| ||||    
T  52186265 ttggaataaaattctcatctttatattccaaggaatg-ttattccttaaaataaatttggtaaacttaaaacaaatacac 52186343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 2632656 - 2632579
Alignment:
Q  142 tggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||| ||| ||| ||||||||| |||||||||| ||| | |||||||||||| ||||| |||||||||| ||||    
T  2632656 tggaataaaattcccatatttatattctaaggaatgtt-attcctagaaataaatttagtaaacttgaaacaaatacac 2632579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 49627331 - 49627301
Alignment:
Q  188 aaataaatttggtaaatttgaaacaaacaca 218  Q
    |||||||||||||||||||||||||||||||    
T  49627331 aaataaatttggtaaatttgaaacaaacaca 49627301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15659177 - 15659238
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| | |||| |||||||||| |||||| ||||||||||| ||||| | ||||||||    
T  15659177 tcaaaattggtcttgagggccaaaatcgccacatatgcaaaactttgggggcgattttgtag 15659238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23220694 - 23220633
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| | ||||||||||||||  ||||||  ||||||||||| |||| ||||||||||    
T  23220694 tcaaaattggtcttgggggccaaaaccgccacatgtgcaaaacttaaggggcggttttgtag 23220633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 19923718 - 19923809
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||| ||| ||||||| ||||||||||||| ||| ||| |||| ||||| | | ||||||||||| | || || ||||||||||||    
T  19923718 ttttctaaatatcttagaataaaattctcatctttatgttctaagaaatg-ttatttctaaaaataaatttgatgaacttaaaacaaacacac 19923809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 43600397 - 43600453
Alignment:
Q  76 gggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctttt 131  Q
    |||||||||||||||| || ||| ||||| || | ||||||||||||||||||||||    
T  43600397 gggtcaaaatcgcaaccttaaaatagttagggtgctaaaactgctattaagcctttt 43600453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 47677461 - 47677421
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc 168  Q
    |||| |||||| ||||||||||| |||||||||||||||||    
T  47677461 ttttttaaatatcttggaataaaattctcatctttatattc 47677421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 44356584 - 44356711
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| | |||||||||||||| ||||||| ||||||||||||||||| |||||||||        |||||| || ||||||||||||||||| |||    
T  44356584 tcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtaatttttttcttaggcggccaaaatcgcaactttgagaaa 44356683  T
Q  101 gttatggggtaaaactgctattaagcct 128  Q
    |||| ||| |||||||||||||||||||    
T  44356684 gttaggggctaaaactgctattaagcct 44356711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 53312412 - 53312285
Alignment:
Q  4 aaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn--cttagggggtcaaaatcgcaactttgaaaaag 101  Q
    ||||| |||||||||||||||| |||||||  ||||||| |||||||||||||||||||         ||||||||| ||||||||||||||||||||||    
T  53312412 aaattggccttgggggccaaaactgccacatgtgcaaaatttagggggtggttttgtagtttgtttttcttagggggccaaaatcgcaactttgaaaaag 53312313  T
Q  102 ttatgggg-taaaactgctattaagcct 128  Q
    ||| |||| ||||| |||||||||||||    
T  53312312 ttagggggctaaaaatgctattaagcct 53312285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 12719631 - 12719764
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaactttgaaa 98  Q
    |||||||| | ||||| |||||||| ||||||| ||||||||||||||||||||||||||||         ||||||||| ||||||  ||||||||  |    
T  12719631 tcaaaattggtcttggaggccaaaactgccacagatgcaaaacttagggggtggttttgtagtttttttttcttagggggccaaaatatcaactttggga 12719730  T
Q  99 aagttatgggg-taaaactgctattaagcctttt 131  Q
    |||||| |||| ||||||||||||||||||||||    
T  12719731 aagttagggggttaaaactgctattaagcctttt 12719764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 2837027 - 2836898
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| |||||||||||||||| |  |||||||||||||||||||||| ||||||||||        ||| ||||| |||||||||| ||||| |||    
T  2837027 tcaaaattggccttgggggccaaaactctcacacatgcaaaacttagggggcggttttgtagttttttttctttgggggccaaaatcgcagctttggaaa 2836928  T
Q  100 agttatgggg-taaaactgctattaagcct 128  Q
    ||||| |||| |||||||| ||||||||||    
T  2836927 agttagggggttaaaactgttattaagcct 2836898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 41744480 - 41744567
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||||||||||||||||| || ||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  41744480 ctaaattccttggaataaaattctcatctttatattccaatgaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 41744567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 45748050 - 45748141
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  45748050 ttttctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 45748141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 55968255 - 55968346
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  55968255 ttttctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 55968346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 30790367 - 30790277
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||| ||||||| |||||||||||||||||||||||||||| | ||||| ||| | | ||||||||||||| |||| |||||||||||||||    
T  30790367 ttttttaaatactttggaataaatttctcatctttatattccaagaatg-ttactcctagaaataaatttgctaaacttgaaacaaacacac 30790277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 20112336 - 20112439
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| || ||||||||||||| ||||||| ||||||||||| ||||| ||||||||||       ||| ||||| |||||||||||||||| ||||    
T  20112336 tcaaaattggctttgggggccaaaactgccacatatgcaaaactttgggggcggttttgtagtatttttctttgggggccaaaatcgcaactttggaaaa 20112435  T
Q  101 gtta 104  Q
    ||||    
T  20112436 gtta 20112439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 25909615 - 25909476
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| ||||||||||||||||   |||||  |||||||||||||||| |||||| |||        ||||||||| ||||||| |||||||| |||    
T  25909615 tcaaaattggccttgggggccaaaacctccacaagtgcaaaacttagggggcggttttatagttttttttcttagggggccaaaatcacaactttggaaa 25909516  T
Q  100 agttatggggt-aaaactgctattaagccttttctaaata 138  Q
    ||||| ||||| |||||||||||||||||| || ||||||    
T  25909515 agttagggggttaaaactgctattaagcctgttataaata 25909476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 38413996 - 38413907
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacac 217  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||||| ||||| | | || ||||||||||||| |||||||||||||    
T  38413996 ttttctaaataccttggaattaaattctcatctttatattccaaggaatg-ttatttctaaaattaaatttggtaaacttgaaacaaacac 38413907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 2016919 - 2016789
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| |||||||||||||||| |||||||  ||||||||||||||||  |||||||||        ||| | ||| |||||||||||||||| |||    
T  2016919 tcaaaattggccttgggggccaaaactgccacatgtgcaaaacttagggggcagttttgtagtcttttttctttgagggccaaaatcgcaactttggaaa 2016820  T
Q  100 agttatgggg-taaaactgctattaagcctt 129  Q
    ||||| |||| |||||||||||| |||||||    
T  2016819 agttagggggctaaaactgctatcaagcctt 2016789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6207360 - 6207421
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  6207360 tcaaaattgaccttgggggccaaaattgccacaaatgcaaaacttagggggcggttttgtag 6207421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 14449470 - 14449599
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaactttgaaa 98  Q
    |||||||| |||||||||||||||| ||||||| ||||||||||||||| | ||||||||||         |||| | || |||||||||||||||| ||    
T  14449470 tcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggagcggttttgtagttttttttccttaagaggccaaaatcgcaactttggaa 14449569  T
Q  99 aagttatgggg-taaaactgctattaagcc 127  Q
    |||||| |||| ||||||| ||||||||||    
T  14449570 aagttagggggctaaaactactattaagcc 14449599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 10401035 - 10401126
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||| ||| ||||||||||| ||||||| |||||| ||||| ||||||| ||| |||||||||||||||||||| || ||||||||||||    
T  10401035 ttttctatatatcttggaataaaattctcatttttatacttcaaagaatgtt-atttccagaaataaatttggtaaacttaaaacaaacacac 10401126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 13230248 - 13230335
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  13230248 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 13230335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 14060889 - 14061018
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||||||||   |||||||||        ||||||| | ||||||||||||||||||||    
T  14060889 tcaaaattagccttgggggccaaaactgccacagatgtaaaacttaggggacagttttgtagttttttttcttagggagccaaaatcgcaactttgaaaa 14060988  T
Q  100 agttatgg-ggtaaaactgctattaagcct 128  Q
    | ||| || | |||| ||||||||||||||    
T  14060989 aattagggagttaaagctgctattaagcct 14061018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 21871585 - 21871696
Alignment:
Q  13 ttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-ta 111  Q
    ||||||||||||| | ||| | |||||||||||||| || ||||||||||        |||||||||||||||||||||||||||||||||| |||| ||    
T  21871585 ttgggggccaaaactaccaaagatgcaaaacttaggaggcggttttgtagtttttt--ttagggggtcaaaatcgcaactttgaaaaagttagggggcta 21871682  T
Q  112 aaactgctattaag 125  Q
    ||| ||||||||||    
T  21871683 aaattgctattaag 21871696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 21927446 - 21927557
Alignment:
Q  13 ttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-ta 111  Q
    ||||||||||||| | ||| | |||||||||||||| || ||||||||||        |||||||||||||||||||||||||||||||||| |||| ||    
T  21927446 ttgggggccaaaactaccaaagatgcaaaacttaggaggcggttttgtagtttttt--ttagggggtcaaaatcgcaactttgaaaaagttagggggcta 21927543  T
Q  112 aaactgctattaag 125  Q
    ||| ||||||||||    
T  21927544 aaattgctattaag 21927557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 39730552 - 39730639
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  39730552 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 39730639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 39835566 - 39835653
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| |||   |||||||||||||||||| |||||||||||||||    
T  39835566 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcatagaaataaatttggtaaacttgaaacaaacacac 39835653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 40435716 - 40435629
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | | |||||||||||||||| |||||||||||||||    
T  40435716 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 40435629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 41859305 - 41859392
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| ||||| |||||| ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  41859305 ctaaattccttgaaataaaattctcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 41859392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 43723080 - 43722993
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| | |||||||||| ||| ||||||||||||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  43723080 ctaaattctttggaataaaattcccatctttatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 43722993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 47670178 - 47670091
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  47670178 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 47670091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 51362667 - 51362533
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag----nnnnnnncttagggggtcaaaatcgcaactttga 96  Q
    |||||||| | |||||||||||||| ||||||| ||||||||||||||||| ||||||||||           ||||||||| |||||||||||||||      
T  51362667 tcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtagttttttttcttcttagggggccaaaatcgcaactttag 51362568  T
Q  97 aaaagttatgggg-taaaactgctattaagccttt 130  Q
    |||||||| |||| ||||||| ||||||| |||||    
T  51362567 aaaagttagggggctaaaactactattaaaccttt 51362533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 10059883 - 10060013
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag---nnnnnnncttagggggtcaaaatcgcaactttgaa 97  Q
    |||||||| |||||| ||||||||| ||||||| ||||||||||||||||| ||||||||||          |||| ||||  |||||||||||||||||    
T  10059883 tcaaaattggccttgagggccaaaactgccacagatgcaaaacttagggggcggttttgtagttttttttttcttaaggggcaaaaatcgcaactttgaa 10059982  T
Q  98 aaagttatggg-gtaaaactgctattaagcc 127  Q
    ||| ||| |||  ||||||||||||||||||    
T  10059983 aaaattaggggtctaaaactgctattaagcc 10060013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 14060868 - 14060760
Alignment:
Q  15 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaa 113  Q
    ||||||||||| ||| | |  |||||| ||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||| |||| ||||    
T  14060868 gggggccaaaactgctatagttgcaaagcttagggggcggttttgtagtttttt-cttagggggtcaaaatcgcaactttgaaaaagttagggggttaaa 14060770  T
Q  114 actgctatta 123  Q
    ||||||||||    
T  14060769 actgctatta 14060760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 1420730 - 1420859
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| |||||||||| || || ||||||| |||||||||||| |||| ||||||||||        ||||||||  |||||||| |||||||  ||    
T  1420730 tcaaaattggccttgggggtcataactgccacaaatgcaaaacttatggggcggttttgtagttctttttcttaggggaccaaaatcgtaactttgggaa 1420829  T
Q  100 agttatgggg-taaaactgctattaagcct 128  Q
    ||||| |||| |||||||||||||||||||    
T  1420830 agttaaggggctaaaactgctattaagcct 1420859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 8322061 - 8321974
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| ||||| |||||| ||||||||||||||||| || ||||||| ||| | | |||||||||||||||| |||||||||||||||    
T  8322061 ctaaattccttgtaataaaattctcatctttatattccaaagaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 8321974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 23686603 - 23686516
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  23686603 ctaaattccttggaataaaattcccatctttatatttcaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 23686516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 25932257 - 25932170
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||| ||||||||||| ||||| | || ||||||||||| ||| |||||||||||||||    
T  25932257 ctaaattccttggaataaaattcccatctttatatttcaaggaatg-ttattcctaggaataaatttgggaaacttgaaacaaacacac 25932170  T

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Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 27555243 - 27555156
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||| ||||| |||||||||||||||    
T  27555243 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttagtaaacttgaaacaaacacac 27555156  T

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Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 45596084 - 45595997
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  45596084 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 45595997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 215
Target Start/End: Original strand, 48519150 - 48519233
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 215  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||    
T  48519150 ctaaattccttggaataaaattcacatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaac 48519233  T

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Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 51968599 - 51968508
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||| ||||||||||||||| ||||||||||||  | | |||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  51968599 ttttctatataccttggaataaaattctcatctttacgtacgaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 51968508  T

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Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 27978819 - 27978695
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| |||||||||| ||||| ||||||| ||||||||||||   ||  ||||||||        ||||||||||||||||||||||||||| |||    
T  27978819 tcaaaattggccttgggggtcaaaactgccacaaatgcaaaacttatatggcagttttgtaatttttttcttagggggtcaaaatcgcaactttgagaaa 27978720  T
Q  101 gtta-tggggtaaaactgctattaa 124  Q
    ||||  ||| | |||||||||||||    
T  27978719 gttagagggcttaaactgctattaa 27978695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 50673163 - 50673245
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaa 214  Q
    |||||| |||||||||||| |||||||||||||| ||||||||||| ||||| | || |||||||||| |||| ||||||||||    
T  50673163 ctaaattccttggaataaaattctcatctttatatttcaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaa 50673245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 8965714 - 8965825
Alignment:
Q  13 ttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggggtaa 112  Q
    |||||| |||||| ||||||| ||||||||||||||||| |||||| |||       |||||||   ||||||||||||||||||||| ||| ||| |||    
T  8965714 ttggggaccaaaactgccacagatgcaaaacttagggggcggttttatagttttt--cttagggc--caaaatcgcaactttgaaaaaattaggggttaa 8965809  T
Q  113 aactgctattaagcct 128  Q
    || |||||||||||||    
T  8965810 aattgctattaagcct 8965825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 42773764 - 42773679
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacac 217  Q
    |||||| |||||||||||| ||| |||||||||| || |||||||||| ||| | || ||||||||||||||| |||||||||||||    
T  42773764 ctaaattccttggaataaaattcccatctttatactccaaggaatgtt-atttctaggaataaatttggtaaacttgaaacaaacac 42773679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43074774 - 43074824
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttaggggg 51  Q
    |||||||| |||||||||||||||| ||||||| |||||||||||||||||    
T  43074774 tcaaaattggccttgggggccaaaactgccacagatgcaaaacttaggggg 43074824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 1420627 - 1420537
Alignment:
Q  36 tgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaag 125  Q
    |||||||||||||||| ||||||||||        ||||| || |||||||||||||||| |||||||| |||| ||||||||||||||||    
T  1420627 tgcaaaacttagggggcggttttgtagttttttttttaggaggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaag 1420537  T

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Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2654155 - 2654216
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| |||||||||| ||||| ||||||| |||||||||||||||||  |||||||||    
T  2654155 tcaaaattggccttgggggtcaaaactgccacatatgcaaaacttagggggcagttttgtag 2654216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14016853 - 14016792
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||||||||||| |||||||| ||||||| || ||||||||| |||| ||||||||||    
T  14016853 tcaaaattagccttggaggccaaaactgccacaaatacaaaacttaaggggcggttttgtag 14016792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 19909226 - 19909169
Alignment:
Q  75 ggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctttt 131  Q
    |||| ||||||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  19909226 ggggccaaaatcgcaactttgagaaagttagggggttaaaactgctattaagcctttt 19909169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 48873830 - 48873750
Alignment:
Q  139 ccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||||  ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  48873830 ccttggaataatattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 48873750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 48879134 - 48879054
Alignment:
Q  139 ccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||||  ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  48879134 ccttggaataatattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 48879054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 21957596 - 21957536
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatgg-ggtaaaactgctattaagccttt 130  Q
    |||||||||||||||||||||||||| ||||||| || | |||||||| ||||||||||||    
T  21957596 ttagggggtcaaaatcgcaactttgagaaagttagggagctaaaactgatattaagccttt 21957536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 23759760 - 23759889
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| ||||||| |||||||| || |||| || |||||||||||||  ||||||||||       ||||||||  |||||||||||||||   |||    
T  23759760 tcaaaattggccttggaggccaaaactgtcacagatacaaaacttaggggacggttttgtagtttttttcttaggggaccaaaatcgcaactttatgaaa 23759859  T
Q  101 gttatgggg-taaaactgctattaagcctt 129  Q
    |||| |||| ||||| || |||||||||||    
T  23759860 gttaaggggttaaaattgttattaagcctt 23759889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 27763158 - 27763245
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||  |||||||||||| |||||||||| ||| | || |||||||||| |||| |||||||||||||||    
T  27763158 ctaaattccttggaataaaattcctatctttatattccaaggaatgtt-attcctaggaataaatttgataaacttgaaacaaacacac 27763245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 31938128 - 31938215
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||| || ||||||||| ||| ||||||||| ||||| | |  |||||||||| |||| |||||||||||||||    
T  31938128 ctaaataccttggaataaaattttcatctttaaattccaaggaatg-ttattcctatgaataaatttgataaacttgaaacaaacacac 31938215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 124
Target Start/End: Complemental strand, 2180823 - 2180780
Alignment:
Q  81 aaaatcgcaactttgaaaaagttatggggtaaaactgctattaa 124  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  2180823 aaaatcgcaactttgaaaaagttaagggttaaaactgctattaa 2180780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 38394727 - 38394636
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||||||||| |||||| ||||||| ||||| ||| | |||   ||| |   |||||||||||||||||| |||||||||||||||    
T  38394727 ttttctaaataccttgaaataaaattctcatatttatgttctaagaaatattagtcttagaaataaatttggtaaacttgaaacaaacacac 38394636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 47999657 - 47999533
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| ||||| |||| ||||| ||||||| ||| |||||||| || | ||||||||||        |||||||||  |||||||||||||||||||    
T  47999657 tcaaaattggccttaggggtcaaaactgccacagatgtaaaacttatggagcggttttgtagttttttttcttagggggcaaaaatcgcaactttgaaaa 47999558  T
Q  100 agttatggggtaaaactgctattaa 124  Q
    | ||| | | |||||||||||||||    
T  47999557 aattaggagttaaaactgctattaa 47999533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 23759686 - 23759555
Alignment:
Q  3 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagt 102  Q
    |||||| |||||||||||||||| | | |||  ||||||| |||||||  ||||||||||       |||| |||| |||||||||||||||   |||||    
T  23759686 aaaattggccttgggggccaaaactactacagttgcaaaatttaggggacggttttgtagtttttttcttaaggggccaaaatcgcaactttatgaaagt 23759587  T
Q  103 tatgggg-taaaactgctattaagccttttct 133  Q
    || ||||  |||||| ||||||||||||||||    
T  23759586 tagggggcgaaaactactattaagccttttct 23759555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 214
Target Start/End: Original strand, 34238214 - 34238295
Alignment:
Q  133 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaa 214  Q
    ||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | |  |||||||||| |||| ||||||||||    
T  34238214 taaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctatgaataaatttgataaacttgaaacaaa 34238295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21597588 - 21597649
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    ||||||||||  ||||||||||||| ||||||| |||||||| |||||||  ||||||||||    
T  21597588 tcaaaattagttttgggggccaaaactgccacatatgcaaaatttaggggacggttttgtag 21597649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 18405222 - 18405132
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||||| | ||| |||||||||| ||||||||||| ||||| | |  ||||||||||| ||| || ||||||||||||    
T  18405222 ttttctaaataccttggaataca-ttcccatctttatatttcaaggaatg-ttattcctaagaataaatttggcaaacttaaaacaaacacac 18405132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 35615371 - 35615315
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagc 126  Q
    |||||||| |||||||||||||||  |||||||| |||| |||||||||||||||||    
T  35615371 ttagggggccaaaatcgcaactttagaaaagttagggggctaaaactgctattaagc 35615315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 53312541 - 53312605
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatggggt-aaaactgctattaagccttttct 133  Q
    ||||| |||||||||||||||||| |  ||||||| ||||| ||||||| |||||||||||||||    
T  53312541 cttagtgggtcaaaatcgcaacttcgtgaaagttagggggtgaaaactgttattaagccttttct 53312605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 6280181 - 6280267
Alignment:
Q  133 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| |||  || ||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  6280181 taaattccttggaataaaattcctatttttatattccaaggaatgtt-attcctatgaataaatttggtaaacttgaaacaaacacac 6280267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 6637249 - 6637373
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| || ||| ||||||||| ||||| | |||||||||||| |||| | ||||||||       |||||||||  ||||||| ||||||||||||    
T  6637249 tcaaaattggcattgtgggccaaaactgccagaaatgcaaaacttaaggggcgattttgtagtttttttcttagggggctaaaatcgaaactttgaaaaa 6637348  T
Q  101 gtt-atggggtaaaactgctattaa 124  Q
     || | ||| ||||| |||||||||    
T  6637349 attaaagggctaaaagtgctattaa 6637373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 7258778 - 7258693
Alignment:
Q  134 aaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccaga-aataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||| ||| ||| ||||||||| |||||||||| ||| || || |||||||||| |||| |||||||||||||||    
T  7258778 aaataccttggaataaaattcccatatttatattccaaggaatgtt-att-cctgagaataaatttgataaacttgaaacaaacacac 7258693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 21957733 - 21957780
Alignment:
Q  80 caaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagc 126  Q
    |||||||||||||||| |||||||| |||| |||||||||||||||||    
T  21957733 caaaatcgcaactttggaaaagttagggggctaaaactgctattaagc 21957780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 34049852 - 34049903
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtt 178  Q
    |||||||||| |||||||||||| ||| |||||||||||| |||||||||||    
T  34049852 ttttctaaattccttggaataaaattcccatctttatattccaaggaatgtt 34049903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 50769421 - 50769366
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaa 124  Q
    ||||||||| ||||||||||||||||  ||||||| |||| |||||||||||||||    
T  50769421 cttaggggggcaaaatcgcaactttgggaaagttagggggataaaactgctattaa 50769366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 2017054 - 2017103
Alignment:
Q  80 caaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 128  Q
    |||||||||||||||   |||||||||||| |||||||||||||||||||    
T  2017054 caaaatcgcaactttaggaaagttatggggctaaaactgctattaagcct 2017103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11824315 - 11824267
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggg 50  Q
    |||||||| ||||||||  |||||| ||||||||||||||||||||||||    
T  11824315 tcaaaattggccttggga-ccaaaactgccacacatgcaaaacttagggg 11824267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 12276166 - 12276250
Alignment:
Q  129 tttctaaataccttggaataaatttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaa 214  Q
    ||||||||||  ||| |||||| ||| |||||||||||||||  |||| ||||| | | |||||||||| ||||| ||||||||||    
T  12276166 tttctaaatattttgaaataaaattcacatctttatattcaaaaaatg-ttattcctataaataaatttagtaaacttgaaacaaa 12276250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20118089 - 20118150
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| | |||||||||||||| || |||| |||||||||||  ||||| |||||||||    
T  20118089 tcaaaattggtcttgggggccaaaactggcacatatgcaaaacttcaggggttgttttgtag 20118150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 21451506 - 21451457
Alignment:
Q  81 aaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctt 129  Q
    |||||||||||||||| ||||||| | || ||||||||||||||||||||    
T  21451506 aaaatcgcaactttgagaaagttaggaggctaaaactgctattaagcctt 21451457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 29697631 - 29697590
Alignment:
Q  20 ccaaaattgccacacatgcaaaacttagggggtggttttgta 61  Q
    |||||| ||||||| ||||||||||||||||| |||||||||    
T  29697631 ccaaaactgccacagatgcaaaacttagggggcggttttgta 29697590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31553428 - 31553489
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| |||||||||||||||| ||||| | ||| |||| |||||||| | ||||||||    
T  31553428 tcaaaattggccttgggggccaaaactgccatagatgtaaaatttagggggcgattttgtag 31553489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 32953339 - 32953255
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 216  Q
    |||||| |||||||||||| ||| |||||||||||| ||| ||||  ||||| | ||||||||||| | |||| ||||||||||||    
T  32953339 ctaaattccttggaataaaattcccatctttatattccaatgaat-attatttctagaaataaattagataaacttgaaacaaaca 32953255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 43074827 - 43074880
Alignment:
Q  75 ggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcc 127  Q
    |||||||||||||||||||||  ||||||| |||| ||||| ||||||||||||    
T  43074827 ggggtcaaaatcgcaactttgggaaagttagggggctaaaattgctattaagcc 43074880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 1186715 - 1186655
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagccttt 130  Q
    |||||||| ||||||||||||||| ||||||||| ||||  |||| ||| |||||||||||    
T  1186715 ttagggggccaaaatcgcaacttttaaaaagttagggggccaaaagtgcaattaagccttt 1186655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1186874 - 1186934
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 61  Q
    |||||| | |||||||||||||||||||||| | || ||| || |||||||| ||||||||    
T  1186874 tcaaaagtggccttgggggccaaaattgccaaagatccaatacatagggggttgttttgta 1186934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 18405516 - 18405579
Alignment:
Q  156 catctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  18405516 catctttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 18405579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 36860012 - 36860102
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||| |||||||| |  ||||||| ||| ||||| ||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  36860012 ttttctatataccttgaataaaatttc-catttttatgttccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 36860102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 37832953 - 37833013
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatg-gggtaaaactgctattaagcctt 129  Q
    |||||||| ||||||||||||||||   ||||||| | || ||||||||||||||||||||    
T  37832953 cttaggggttcaaaatcgcaactttaggaaagttaggaggctaaaactgctattaagcctt 37833013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 127
Target Start/End: Original strand, 52463053 - 52463101
Alignment:
Q  80 caaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcc 127  Q
    ||||||||||||||||||||| ||| |||| |||||||| |||||||||    
T  52463053 caaaatcgcaactttgaaaaaattagggggctaaaactgttattaagcc 52463101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 54855355 - 54855303
Alignment:
Q  77 ggtcaaaatcgcaactttgaaaaagttatg-gggtaaaactgctattaagcct 128  Q
    ||||||||||||| |||||| ||||||| | || |||||||||||||||||||    
T  54855355 ggtcaaaatcgcagctttgagaaagttaggtggttaaaactgctattaagcct 54855303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 20853493 - 20853377
Alignment:
Q  12 cttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-t 110  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||        |||||||||||||||||||||||  | ||||||| |||| |    
T  20853493 cttgggggccaaaactgccacatatgcaaaacttagggggtggttttgtagttttttt-ttagggggtcaaaatcgcaacttcaagaaagttagggggct 20853395  T
Q  111 aaaactgctattaagcct 128  Q
    ||||||||||||||||||    
T  20853394 aaaactgctattaagcct 20853377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 7931051 - 7930964
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||||||||||||||||| || ||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  7931051 ctaaattccttggaataaaattctcatctttatattccaaagaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 7930964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 35818683 - 35818770
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  35818683 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 35818770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 37982042 - 37982133
Alignment:
Q  128 ttttctaaataccttggaataaat-ttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||| ||||||||||||||||||  ||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||||||||||||    
T  37982042 ttttttaaataccttggaataaaaattctcatctttatgttcaaggaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 37982133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 30539189 - 30539305
Alignment:
Q  13 ttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatggggta 111  Q
    ||||||||||||| ||||||| ||||||||||||||||  ||||||||||        ||||||||  ||||||||||||||||  ||||||| ||| ||    
T  30539189 ttgggggccaaaactgccacagatgcaaaacttaggggacggttttgtagttttttttcttaggggaccaaaatcgcaactttgggaaagttaagggcta 30539288  T
Q  112 aaactgctattaagcct 128  Q
    |||||||||||||||||    
T  30539289 aaactgctattaagcct 30539305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 10896475 - 10896560
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacac 217  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||    
T  10896475 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacac 10896560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 26823954 - 26823828
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| || |||||| |||||| ||||||| ||||||||||||||||||| ||||||||        |||| ||||||||||||| |||||||| ||    
T  26823954 tcaaaattggcattggggcccaaaactgccacaaatgcaaaacttagggggtgattttgtagttttttttcttaaggggtcaaaatcgtaactttgagaa 26823855  T
Q  100 agtta-tggggtaaaactgctattaag 125  Q
    |||||  ||| ||||||||||||||||    
T  26823854 agttagagggttaaaactgctattaag 26823828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37813277 - 37813338
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  37813277 tcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtag 37813338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 16313766 - 16313853
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | | ||||||||||| |||| |||||||||||||||    
T  16313766 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaaaaataaatttgataaacttgaaacaaacacac 16313853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 18297924 - 18297837
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | ||||||||||||| |||| |||||||||||||||    
T  18297924 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctagaaataaatttgataaacttgaaacaaacacac 18297837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 25837723 - 25837636
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | | |||||||||||||||| |||||||||||||||    
T  25837723 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 25837636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 26061956 - 26061869
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| || ||||||||||||    
T  26061956 ctaaattccttggaataaaattctcatctttatattacaaggaatg-ttattcctaggaataaatttggtaaacttaaaacaaacacac 26061869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 37392805 - 37392892
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  37392805 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 37392892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 38132997 - 38133084
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | |  ||||||||||||||| |||||||||||||||    
T  38132997 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaagaataaatttggtaaacttgaaacaaacacac 38133084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 43872220 - 43872311
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||||||| ||  ||||| |||||| ||||||||||| ||| | |||||||||||||| ||| |||||||||||||||    
T  43872220 ttttctaaataccttggaataaaatttacatctatatatttcaaggaatgtt-attcctagaaataaatttggcaaacttgaaacaaacacac 43872311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 45177329 - 45177201
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    ||||||||||||||| ||||||||| || |||| ||||||||||||||||  | ||||||||        |||||||| |||||||||||||||||| ||    
T  45177329 tcaaaattagccttgagggccaaaactgtcacagatgcaaaacttaggggacgattttgtagttttttttcttaggggatcaaaatcgcaactttgagaa 45177230  T
Q  100 agttatg-gggtaaaactgctattaagcc 127  Q
    ||||| | || |||| |||||||||||||    
T  45177229 agttaggaggctaaatctgctattaagcc 45177201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 36688253 - 36688311
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcc 127  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  36688253 cttagggggtcaaaatcacaactttgaaaaagttagggggttaaaactgctattaagcc 36688311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 37940021 - 37939917
Alignment:
Q  19 gccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatg-gggtaaaactg 117  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||        ||| |||| ||||||||||||||||||||| ||| | || ||||||||    
T  37940021 gccaaaactgccacatatgcaaaacttagggggtggttttgtagtttttt--ttaaggggccaaaatcgcaactttgaaaaaattaagaggctaaaactg 37939924  T
Q  118 ctattaa 124  Q
    |||||||    
T  37939923 ctattaa 37939917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 12710449 - 12710370
Alignment:
Q  140 cttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  12710449 cttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 12710370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 15226782 - 15226695
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 215  Q
    |||||||||||||||| |||||| |||||||||||||||| ||||||| | ||||| | |  ||||||||||||||| |||||||||||    
T  15226782 ttttctaaataccttgaaataaaattctcatctttatattccaaggaaag-ttattcctaataataaatttggtaaaattgaaacaaac 15226695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 18726879 - 18726966
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| || |||||||||||||| ||  |||||| ||| | |||||||||||||||||| |||||||||||||||    
T  18726879 ctaaattccttggaataaaattttcatctttatattccaattaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 18726966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 26602196 - 26602283
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||| || ||||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  26602196 ctaaattccttggaataaaattcccatctttatgtttcaaggaatgtt-atttctagcaataaatttggtaaacttgaaacaaacacac 26602283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 38363893 - 38363806
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  38363893 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 38363806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 32071235 - 32071326
Alignment:
Q  35 atgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcct 128  Q
    ||||||||||||||||| ||||||||||       |||||||| ||||||||||||||||  |||||||| ||| |||||||||||||||||||    
T  32071235 atgcaaaacttagggggcggttttgtagtttttt-cttagggg-tcaaaatcgcaactttagaaaagttaggggctaaaactgctattaagcct 32071326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 32661194 - 32661280
Alignment:
Q  133 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||| ||||| |||||||||||||||    
T  32661194 taaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttagtaaacttgaaacaaacacac 32661280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 39889971 - 39890091
Alignment:
Q  13 ttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatgggg-t 110  Q
    |||| |||||||||||||||| ||||||||||||| ||| || |||||||        ||||| |||| |||||||||||||| |||| |||| || | |    
T  39889971 ttggaggccaaaattgccacagatgcaaaacttagagggcggatttgtagttttttttcttagagggtaaaaatcgcaactttaaaaaggttaaggagct 39890070  T
Q  111 aaaactgctattaagcctttt 131  Q
    |||||||||||||||||||||    
T  39890071 aaaactgctattaagcctttt 39890091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 6807355 - 6807480
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    ||||||||  ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||        |||| |||||||||| |||||||||  |||    
T  6807355 tcaaaattgaccttgagggacaaaactgccacaaatgcaaaacttagggggtggttttgtagtttttt--ttagagggtcaaaattgcaactttgggaaa 6807452  T
Q  101 gttatggg-gtaaaactgctattaagcc 127  Q
    |||| |||  ||||| ||||||||||||    
T  6807453 gttaggggactaaaattgctattaagcc 6807480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 25897047 - 25896993
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaa 124  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||    
T  25897047 ttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaa 25896993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 5020750 - 5020838
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacaca 220  Q
    ||||||||||| ||||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||| ||||||||||||||||    
T  5020750 ctaaataccttagaataaaattatcatctttatattccaaagaatg-ttattcctaaaaataaatttgataaacttgaaacaaacacaca 5020838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 3049825 - 3049734
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||| |||| ||||||| ||| |||||||||| ||||||||||| ||||| | |  |||||||||| |||| |||||||||||||||    
T  3049825 ttttctaaattccttcgaataaaattcccatctttatatttcaaggaatg-ttattcctatgaataaatttgataaacttgaaacaaacacac 3049734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 6807264 - 6807172
Alignment:
Q  36 tgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 128  Q
    |||||||||||||||||||||| ||||       ||||||||| |||||||||||||| || ||||||||||||  |||||| |||||||||||    
T  6807264 tgcaaaacttagggggtggttt-gtagtttttttcttagggggccaaaatcgcaacttcgagaaagttatggggcaaaaactactattaagcct 6807172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 25144130 - 25144190
Alignment:
Q  3 aaaattagccttgggg-gccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||| ||||||||| ||||||||||| |||  |||||||||||||||||||||||||||    
T  25144130 aaaattggccttggggggccaaaattgcaacaattgcaaaacttagggggtggttttgtag 25144190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 25899475 - 25899384
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||| ||||||| |||  ||||||||||| ||||||||| ||||| | | ||||||||||| || | |||||||||||||||    
T  25899475 ttttctaaataccttagaataaaattcctatctttatattccaaggaatg-ttattcctaaaaataaatttgttacacttgaaacaaacacac 25899384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 31117781 - 31117872
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||||| ||| |||||| |||||||||||||||| ||| ||||| ||||| | | | ||||||||| |||| |||||||||||||||    
T  31117781 ttttctaaatactttgaaataaaattctcatctttatattccaatgaatg-ttattcctaaatataaatttgataaacttgaaacaaacacac 31117872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 42755679 - 42755592
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||| |||||| |||||||||| ||| | || |||||||||| |||| |||||||||||||||    
T  42755679 ctaaattccttggaataaaattcccatcttcatattccaaggaatgtt-attcctaggaataaatttgataaacttgaaacaaacacac 42755592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 35394202 - 35394155
Alignment:
Q  133 taaataccttggaataaatttctcatctttata-ttcaaggaatgttt 179  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  35394202 taaataccttggaataaaattctcatctttatatttcaaggaatgttt 35394155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 29044733 - 29044863
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| |||||||||||||||| ||||||| |||||||||||| |||   |||||||||       |||| |||  |||||||| ||||||    ||    
T  29044733 tcaaaattggccttgggggccaaaactgccacaaatgcaaaacttatgggacagttttgtaggttttttctta-gggaccaaaatcgtaactttagggaa 29044831  T
Q  101 gttatgggg-taaaactgctattaagcctttt 131  Q
    |||| |||| ||||||||||||||||||||||    
T  29044832 gttagggggctaaaactgctattaagcctttt 29044863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 45515990 - 45515932
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 128  Q
    ||||||| |||||||||||||||||||||| ||| |||| ||||||||| |||||||||    
T  45515990 ttaggggttcaaaatcgcaactttgaaaaaattaaggggctaaaactgcaattaagcct 45515932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16982797 - 16982857
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| ||||||||||| |||| || |||| ||||||||||||||||| ||||||||||    
T  16982797 tcaaaattggccttgggggc-aaaactggcacagatgcaaaacttagggggcggttttgtag 16982857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 19160996 - 19161087
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccaga-aataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||| || ||||||||||||||||||||||| ||| ||||| ||||| |  || |||||||||| |||| |||||||||||||||    
T  19160996 ttttctaaataccctgaaataaatttctcatctttatattccaaagaatg-ttatt-cttgagaataaatttgataaacttgaaacaaacacac 19161087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 27545544 - 27545634
Alignment:
Q  3 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactt 93  Q
    |||||| |||||||||||||||| ||| |||  || |||||||||||| | |||||||||       ||||||||| ||||||||||||||    
T  27545544 aaaattggccttgggggccaaaactgctacaattgtaaaacttaggggatagttttgtagtttttttcttagggggccaaaatcgcaactt 27545634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 29657817 - 29657702
Alignment:
Q  15 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtag----nnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgg-gg 109  Q
    ||||||||||| ||||||| |||||||| |||||||| ||||||||||           ||||| ||| ||||||||||||||||| ||||||| || ||    
T  29657817 gggggccaaaactgccacatatgcaaaatttagggggcggttttgtagttttttttcttcttagagggccaaaatcgcaactttgataaagttagggagg 29657718  T
Q  110 taaaactgctattaag 125  Q
    ||||||| ||||||||    
T  29657717 taaaactcctattaag 29657702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 35213088 - 35213027
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagtta-tggggtaaaactgctattaagcctttt 131  Q
    |||||||||||||||||||||||||  ||||||| ||||  ||||| |||||||||||||||    
T  35213088 ttagggggtcaaaatcgcaactttgtcaaagttagtgggcgaaaaccgctattaagcctttt 35213027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 16219196 - 16219287
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||||||| ||||||||||||  || ||||||| | ||||| | || |||||||| | |||| || ||||||||||||    
T  16219196 ttttctaaataccttggaataaaattctcatctttaagttccaaggaacg-ttattcctaggaataaattggataaacttaaaacaaacacac 16219287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 17071020 - 17070903
Alignment:
Q  15 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggggt-aaa 113  Q
    ||||||||||| ||| |||  ||||||||||||||  ||||||||| |        |||||||| |||||||||||||| |  ||||||| ||||  |||    
T  17071020 gggggccaaaactgctacagttgcaaaacttagggaatggttttgttgttttttttttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaa 17070921  T
Q  114 actgctattaagcctttt 131  Q
    ||||||||||||||||||    
T  17070920 actgctattaagcctttt 17070903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 17577252 - 17577369
Alignment:
Q  15 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggggt-aaa 113  Q
    ||||||||||| ||| |||  ||||||||||||||  ||||||||| |        |||||||| |||||||||||||| |  ||||||| ||||  |||    
T  17577252 gggggccaaaactgctacagttgcaaaacttagggaatggttttgttgttttttttttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaa 17577351  T
Q  114 actgctattaagcctttt 131  Q
    ||||||||||||||||||    
T  17577352 actgctattaagcctttt 17577369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 23702321 - 23702450
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    ||||||||  |||||| |||||||| || |||| ||||||||||||||||    |||||||        |||||||||  ||||||||||||||   |||    
T  23702321 tcaaaattgaccttggaggccaaaactgtcacaaatgcaaaacttaggggacaattttgtaatttttttcttagggggctaaaatcgcaacttttggaaa 23702420  T
Q  101 gttatgggg-taaaactgctattaagcctt 129  Q
    |||| |||| ||||||||||||||||||||    
T  23702421 gttagggggctaaaactgctattaagcctt 23702450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 44269373 - 44269433
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctt 129  Q
    ||||||||||||||||||||||||||| ||| ||| |||| ||||| | ||||||||||||    
T  44269373 cttagggggtcaaaatcgcaactttgagaaaattagggggttaaaattactattaagcctt 44269433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 28349563 - 28349622
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 128  Q
    ||||||||| ||||||||||||||||  ||||||| |||| ||||||| |||||||||||    
T  28349563 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactactattaagcct 28349622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 15181697 - 15181640
Alignment:
Q  70 cttagggggtcaaaatcgcaactttga-aaaagttatgggg-taaaactgctattaagc 126  Q
    ||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  15181697 cttaggggg-caaaatcacaactttgagaaaagttatggggctaaaactgctattaagc 15181640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 21486771 - 21486721
Alignment:
Q  12 cttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    ||||| |||||||| |||||||  |||||||||||||||| ||||||||||    
T  21486771 cttggaggccaaaaatgccacaggtgcaaaacttagggggcggttttgtag 21486721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 27545401 - 27545343
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagtta-tggggtaaaactgctattaagcct 128  Q
    |||||||||| |||||||||||||| ||||||||   || |||||||||||||||||||    
T  27545401 ttagggggtcgaaatcgcaactttggaaaagttagacggctaaaactgctattaagcct 27545343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 33533649 - 33533738
Alignment:
Q  130 ttctaaataccttggaataaatttctcatctttatattcaa-ggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||| |||||||||| ||| ||||||||||||||| |||||  | ||| | || ||||||||||  ||| |||||||||||||||    
T  33533649 ttctaaatacattggaataaaattcacatctttatattcaaaggaataat-attcctaggaataaatttgacaaacttgaaacaaacacac 33533738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 3676326 - 3676375
Alignment:
Q  13 ttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||| |||||| ||||||| ||||||||||||| ||| ||||||||||    
T  3676326 ttggggaccaaaactgccacagatgcaaaacttagtgggcggttttgtag 3676375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 12649893 - 12649860
Alignment:
Q  186 agaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||||||||||| |||||||||||||||    
T  12649893 agaaataaatttggtaaacttgaaacaaacacac 12649860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14880463 - 14880414
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggg 50  Q
    |||||||  |||||||||||||||| ||||||| |||||||| |||||||    
T  14880463 tcaaaatcggccttgggggccaaaactgccacagatgcaaaatttagggg 14880414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 34608635 - 34608692
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcct 128  Q
    |||||||| ||||||||||||||| |||||| ||||||  |||| ||| |||||||||    
T  34608635 ttagggggccaaaatcgcaacttttaaaaagatatgggtcaaaagtgcaattaagcct 34608692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41487396 - 41487457
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| | ||||||||||||||  || |||  |||||||||||||||| ||||||||||    
T  41487396 tcaaaattggtcttgggggccaaaacagctacagttgcaaaacttagggggcggttttgtag 41487457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41602610 - 41602549
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| || | ||||||||||| |||||||   ||||||||||| ||||||||||||||    
T  41602610 tcaaaattggcttagggggccaaaactgccacatgggcaaaacttagcgggtggttttgtag 41602549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 33444877 - 33444917
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc 168  Q
    |||||||||||||||| |||||| || ||||||||||||||    
T  33444877 ttttctaaataccttgaaataaaattttcatctttatattc 33444917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 37263416 - 37263356
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctt 129  Q
    ||||||| |||||||||||||||| | |||||||| ||||  |||||||||||||| ||||    
T  37263416 cttagggagtcaaaatcgcaacttcgtaaaagttaaggggcgaaaactgctattaaacctt 37263356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 10727380 - 10727509
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||        ||||||||| ||||||| |||||||| |||    
T  10727380 tcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcacaactttggaaa 10727479  T
Q  100 agttatgggg-taaaactgctattaagcct 128  Q
    ||||| |||| |||||||||||||| ||||    
T  10727480 agttagggggctaaaactgctattatgcct 10727509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 33399912 - 33399785
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    ||||||||  |||| |||||||||| ||||||| ||| |||||||||||   ||||||||||       ||||| ||| |||||||||||||||| ||||    
T  33399912 tcaaaattgaccttaggggccaaaactgccacaaatgtaaaacttagggtccggttttgtagtttttttcttagagggccaaaatcgcaactttggaaaa 33399813  T
Q  101 gttatggggtaaaactgctattaagcct 128  Q
    |||| ||| |||||||||||||||||||    
T  33399812 gttaggggctaaaactgctattaagcct 33399785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 6036846 - 6036976
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| || ||||||| ||||| ||||||| ||||||||||||||||   |||||||||       |||||| || |||||||||||||||  ||||    
T  6036846 tcaaaattggctttgggggtcaaaactgccacatatgcaaaacttaggggacagttttgtagttttcttcttaggaggccaaaatcgcaactttagaaaa 6036945  T
Q  101 gttatggggtaaaactgctattaagcctttt 131  Q
    |||| ||| ||||||||||||||||| ||||    
T  6036946 gttaggggctaaaactgctattaagcttttt 6036976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 6706007 - 6706095
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 216  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||||||||| ||||| | ||||||||| |||||||| ||||||||||||    
T  6706007 ttttctaaataccttagaataaaattctcatctttatatttcaaggaatg-ttattcctagaaataaaattggtaaacttgaaacaaaca 6706095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 14170827 - 14170739
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacaca 220  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | |||||||||||||||||| ||||||||||||||||    
T  14170827 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacaca 14170739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 30349472 - 30349347
Alignment:
Q  5 aattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagtta 104  Q
    |||| |||||||||| ||||| | ||||| |||||||||||| |||| ||||||||||       |||||||| |||||||||||||||||  |||||||    
T  30349472 aattggccttgggggtcaaaactaccacagatgcaaaacttaaggggcggttttgtagtttttttcttaggggctcaaaatcgcaactttgggaaagtta 30349373  T
Q  105 -tggggtaaaactgctattaagcctt 129  Q
      ||| ||||||||||||||||||||    
T  30349372 gagggctaaaactgctattaagcctt 30349347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 12766403 - 12766530
Alignment:
Q  3 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagt 102  Q
    |||||| |||||||||||||||| ||| |||  ||||||||||| |||| ||||||||||        |||||||| |||||||||||||| |  |||||    
T  12766403 aaaattggccttgggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagttttttttttagggggccaaaatcgcaacttcgtgaaagt 12766502  T
Q  103 tatggggt-aaaactgctattaagcctt 129  Q
    || ||||| |||||||||||||||||||    
T  12766503 tagggggtgaaaactgctattaagcctt 12766530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 2853601 - 2853731
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnnctta-gggggtcaaaatcgcaactttgaaa 98  Q
    |||||||| |||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||        |||| ||||| |||||| |||||||||| |    
T  2853601 tcaaaattggccttgggggccaaaactgccacatatgaaaaacttagggggcggttttgtagttttttttcttaggggggccaaaattgcaactttgaga 2853700  T
Q  99 aagttatg-gggtaaaactgctattaagcct 128  Q
    |||||| | || |||||||||||||||||||    
T  2853701 aagttaggaggttaaaactgctattaagcct 2853731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 12328158 - 12328075
Alignment:
Q  127 cttttctaaataccttggaataaatttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaaca 212  Q
    ||||||||||||| ||| ||| || ||| ||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  12328158 cttttctaaatacattg-aatgaaattcacatctttatattcaaagaatgtt-attactagaaataaatttggtaaatttgaaaca 12328075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 1316831 - 1316744
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||| ||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  1316831 ctaaattccttggaataaaattctcatctttatattccaaagaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 1316744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 10246375 - 10246462
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  10246375 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 10246462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 14781865 - 14781955
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||||||| ||||||||||||| || ||| ||||| ||||| |||| |||||||||||||||  ||||||||||||||    
T  14781865 ttttctaaataccttggaataaaattctcatctttatgttccaatgaatg-ttattcccaggaataaatttggtaaa-atgaaacaaacacac 14781955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 16968737 - 16968650
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||| ||||| ||||| | ||||||||||||| |||| |||||||||||||||    
T  16968737 ctaaattccttggaataaaattctcatctttatattccaaagaatg-ttattcctagaaataaatttgataaacttgaaacaaacacac 16968650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26311590 - 26311651
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    ||||||||  ||||||||||||||| ||||||| |||||||||||| |||||||||||||||    
T  26311590 tcaaaattgaccttgggggccaaaactgccacatatgcaaaacttaaggggtggttttgtag 26311651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 2657512 - 2657425
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  2657512 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 2657425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 18897733 - 18897646
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  18897733 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 18897646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 20474903 - 20475014
Alignment:
Q  13 ttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-t 110  Q
    ||||||||||||| ||||||| |||||||||||||||||  |||||||||        |||| ||| |||||||||||||||||||||||||| |||| |    
T  20474903 ttgggggccaaaactgccacagatgcaaaacttaggggg-cgttttgtagttttttttcttaagggatcaaaatcgcaactttgaaaaagttagggggct 20475001  T
Q  111 aaaactgctatta 123  Q
    |||| ||||||||    
T  20475002 aaaattgctatta 20475014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 6036770 - 6036712
Alignment:
Q  3 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 61  Q
    |||||| |||||||||||||||| ||||||| |||||||||||||||| | ||||||||    
T  6036770 aaaattggccttgggggccaaaactgccacatatgcaaaacttaggggatagttttgta 6036712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 2203407 - 2203468
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatgg-ggtaaaactgctattaagcctttt 131  Q
    |||||| |||||| |||||||||||||||||||| || | ||||||||||||||||||||||    
T  2203407 ttagggcgtcaaagtcgcaactttgaaaaagttaaggagttaaaactgctattaagcctttt 2203468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 8029107 - 8029028
Alignment:
Q  140 cttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||| ||  ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  8029107 cttggaataaaatttccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 8029028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 7053838 - 7053924
Alignment:
Q  133 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| ||| ||| ||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  7053838 taaattccttggaataaaattcccatatttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 7053924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 30349612 - 30349671
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatggg-gtaaaactgctattaagcct 128  Q
    ||||||||| ||||||||||||||||||||||||| |||   ||||||||||||||||||    
T  30349612 cttagggggccaaaatcgcaactttgaaaaagttaggggacaaaaactgctattaagcct 30349671  T

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Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 21008234 - 21008322
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 216  Q
    |||||||||| |||||||||||| ||||||||||||||||| ||| |||||| |||   | ||||||||||  |||| ||||||||||||    
T  21008234 ttttctaaatgccttggaataaaattctcatctttatattccaagaaatgtt-attcataaaaataaatttaataaacttgaaacaaaca 21008322  T

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Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 32143306 - 32143261
Alignment:
Q  79 tcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaa 124  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||||    
T  32143306 tcaaaatcgcaactttgaaaaagttaggggctaaatctgctattaa 32143261  T

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Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 3579711 - 3579594
Alignment:
Q  12 cttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggg-gt 110  Q
    |||||||||||||| ||| |||  |||||||||||||||| ||||||||||        ||| |||| |||||||||||||| |  ||||||| |||       
T  3579711 cttgggggccaaaagtgctacagttgcaaaacttagggggcggttttgtagttttttttttacggggccaaaatcgcaacttcgtgaaagttaagggacg 3579612  T
Q  111 aaaactgctattaagcct 128  Q
    ||||||||||||||||||    
T  3579611 aaaactgctattaagcct 3579594  T

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Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26601588 - 26601528
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 61  Q
    |||||||| | ||||||| |||||  || |||| |||||||||||||||||||||||||||    
T  26601588 tcaaaattggtcttggggaccaaagctgtcacagatgcaaaacttagggggtggttttgta 26601528  T

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Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32143386 - 32143326
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 61  Q
    |||||||| | |||||||||||||| |||||||  ||||||||||| |||| |||||||||    
T  32143386 tcaaaattggtcttgggggccaaaactgccacaggtgcaaaacttaaggggcggttttgta 32143326  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 17248694 - 17248636
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatg-gggtaaaactgctattaagcc 127  Q
    ||||| || |||||||||||||||| ||||||||| | || ||||||||||||||||||    
T  17248694 cttagaggatcaaaatcgcaactttaaaaaagttaggaggctaaaactgctattaagcc 17248636  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 8223987 - 8224048
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagtt-atggggtaaaactgctattaagcctttt 131  Q
    ||||||| ||||||||||||||||  ||||||| || ||  |||||||||||||||||||||    
T  8223987 ttaggggatcaaaatcgcaactttagaaaagttaataggtcaaaactgctattaagcctttt 8224048  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 9762298 - 9762386
Alignment:
Q  131 tctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||||| ||||||| ||| ||| |||||| || |||||||||| ||| | |  |||||| |||||||| |||||||||||||||    
T  9762298 tctaaatacctttgaataaaattcacatatttataatccaaggaatgtt-attcctaataataaacttggtaaacttgaaacaaacacac 9762386  T

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Target: chr3 (Bit Score: 57; Significance: 6e-24; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 51315670 - 51315799
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| |||||||||||||||| |||||||  |||||||||||||||| ||||||||||        ||||||||| ||||||||||||||||  ||    
T  51315670 tcaaaattggccttgggggccaaaactgccacaggtgcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgggaa 51315769  T
Q  100 agttatgggg-taaaactgctattaagcct 128  Q
    ||||| |||| |||||||||||||||||||    
T  51315770 agttagggggctaaaactgctattaagcct 51315799  T

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Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 6832177 - 6832268
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||||||| |||||||||||||||| |||| |||| |||||   || |||||||||||||||||||||||||||||||    
T  6832177 ttttctaaataccttggaataaaattctcatctttatattccaagtaatg-ttattcttaggaataaatttggtaaatttgaaacaaacacac 6832268  T

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Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 14340920 - 14341047
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||||||||||    ||||||||        ||||  ||||||||||||||||||||||||    
T  14340920 tcaaaattagcgttgggggccaaaactgccacaaatgcaaaacttaggggactattttgtagttttttttttagatggtcaaaatcgcaactttgaaaaa 14341019  T
Q  101 gttatggggtaaaactgctattaagcct 128  Q
    ||||   ||||||||| |||||||||||    
T  14341020 gttagaaggtaaaactactattaagcct 14341047  T

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Target: chr3; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 38957974 - 38957841
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaactttgaaa 98  Q
    |||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||         ||||  ||| ||||||||||||||| |||    
T  38957974 tcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagtttttttttcttaaagggccaaaatcgcaactttaaaa 38957875  T
Q  99 aagttatg-gggtaaaactgctattaagcctttt 131  Q
    || ||| | || ||||||||||||||||||||||    
T  38957874 aaattaggaggctaaaactgctattaagcctttt 38957841  T

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Target: chr3; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 43719184 - 43719272
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacaca 220  Q
    |||||| |||||||||||| |||||| |||||||||| |||||||||| ||| | |||||||||||||||||| ||||||||||||||||    
T  43719184 ctaaattccttggaataaaattctcaactttatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacaca 43719272  T

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Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 10822976 - 10823063
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||| ||||| | ||||||||||||| |||| |||||||||||||||    
T  10822976 ctaaataccttggaataaaattctcatctttatattgtaaggaatg-ttattcctagaaataaatttgctaaacttgaaacaaacacac 10823063  T

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Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 11239379 - 11239466
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  11239379 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 11239466  T

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Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 26848834 - 26848747
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  26848834 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 26848747  T

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Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 28770464 - 28770555
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||| ||||||||||||||| |||||||| |||| ||| |||||||||| ||| | || |||||||||||||||||||||||||||||||    
T  28770464 ttttctatataccttggaataaaattctcatcattatgttccaaggaatgtt-attcctaggaataaatttggtaaatttgaaacaaacacac 28770555  T

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Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 33218172 - 33218259
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  33218172 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 33218259  T

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Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 44585972 - 44586097
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| ||| |||||||||||| ||||||| | ||||||||||||||| ||||||||||        ||||||||| ||||||||||||||||  ||    
T  44585972 tcaaaattggccgtgggggccaaaactgccacagaagcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgggaa 44586071  T
Q  100 agttatgggg-taaaactgctattaa 124  Q
    ||||| |||| |||||||||||||||    
T  44586072 agttagggggctaaaactgctattaa 44586097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 48340016 - 48340103
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  48340016 ctaaattccttggaataaaattctcatctttatattctaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 48340103  T

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Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 22494667 - 22494555
Alignment:
Q  14 tgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-taa 112  Q
    |||||||||||||||||||| |||||||| |||| ||| ||||||||||       |||||||||||||||||| ||||||| |||| ||| |||| |||    
T  22494667 tgggggccaaaattgccacaaatgcaaaatttagagggcggttttgtagtttttttcttagggggtcaaaatcgtaactttggaaaatttagggggttaa 22494568  T
Q  113 aactgctattaag 125  Q
    || ||||||||||    
T  22494567 aattgctattaag 22494555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 44433250 - 44433381
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttaggg-ggtcaaaatcgcaactttgaa 97  Q
    |||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||         ||||||| || | ||||||||||| || |    
T  44433250 tcaaaattggccttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtagtttttttttcttagggaggccgaaatcgcaactgtgga 44433349  T
Q  98 aaagttatgggg-taaaactgctattaagcct 128  Q
    ||||||| |||| |||||||||||||||||||    
T  44433350 aaagttagggggctaaaactgctattaagcct 44433381  T

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Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44436584 - 44436645
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  44436584 tcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtag 44436645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 8476567 - 8476654
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||  ||||||||||||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  8476567 ctaaattccttggaataaaatttccatctttatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 8476654  T

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Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 31436177 - 31436268
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||| ||||||||||||||| |||  |||||||||||| || ||||||| ||| |||| ||||||||||||||| |||||||||||||||    
T  31436177 ttttctatataccttggaataaaattcctatctttatattctaaagaatgtt-atttccaggaataaatttggtaaacttgaaacaaacacac 31436268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 40908078 - 40907991
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  40908078 ctaaattccttggaataaaattcccatctttatatttcaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 40907991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 43132415 - 43132502
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||| ||||| | |  ||||||||| ||||| |||||||||||||||    
T  43132415 ctaaataccttggaataaaattctcatctttatattccaaggaatg-ttattcctaagaataaatttagtaaacttgaaacaaacacac 43132502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 50802773 - 50802660
Alignment:
Q  14 tgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatg-gggtaa 112  Q
    |||||| ||||| |||||||  ||||||||||||||||| |||||||||       ||||||||| ||||||| |||||||| |||||||| | || |||    
T  50802773 tgggggtcaaaactgccacatgtgcaaaacttagggggtagttttgtagtttttttcttagggggccaaaatcacaactttggaaaagttaagaggttaa 50802674  T
Q  113 aactgctattaagc 126  Q
    ||||||||||||||    
T  50802673 aactgctattaagc 50802660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 50873104 - 50873217
Alignment:
Q  14 tgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatg-gggtaa 112  Q
    |||||| ||||| |||||||  ||||||||||||||||| |||||||||       ||||||||| ||||||| |||||||| |||||||| | || |||    
T  50873104 tgggggtcaaaactgccacatgtgcaaaacttagggggtagttttgtagtttttttcttagggggccaaaatcacaactttggaaaagttaagaggttaa 50873203  T
Q  113 aactgctattaagc 126  Q
    ||||||||||||||    
T  50873204 aactgctattaagc 50873217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 6927907 - 6927817
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    ||||||||||||||| ||||||| |||||||||||||||| ||||||||| ||||| | || |||||||||| |||| || |||||||||||    
T  6927907 ttttctaaataccttagaataaaattctcatctttatattccaaggaatg-ttattcctagtaataaatttgataaacttaaaacaaacaca 6927817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 24574378 - 24574292
Alignment:
Q  133 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| |||||||||||||||| ||||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  24574378 taaattccttggaataaaattctcatctttatatttcaaggaatgtt-attcctatgaataaatttggtaaacttgaaacaaacacac 24574292  T

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Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 47115116 - 47115202
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| ||||||||||||||    
T  47115116 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacaca 47115202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 54719183 - 54719309
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| || ||||||||||||  ||  ||| ||||||||||||||||| ||||||||||       |||||| || |||||||||||||||||| ||    
T  54719183 tcaaaattggcattgggggccaaacctggtacatatgcaaaacttagggggcggttttgtagtttttt-cttaggaggccaaaatcgcaactttgaataa 54719281  T
Q  101 gttatgggg-taaaactgctattaagcc 127  Q
    |||| |||| ||||||||| ||||||||    
T  54719282 gttagggggttaaaactgccattaagcc 54719309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 1099011 - 1098924
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  1099011 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 1098924  T

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Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 20414724 - 20414811
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| | |||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  20414724 ctaaattctttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 20414811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 24784025 - 24783934
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||| |||||||||| ||||||| |||||||||||||||| ||||||||| |||||   |  ||||||||||||||| |||||||||||||||    
T  24784025 ttttttaaataccttagaataaaattctcatctttatattccaaggaatg-ttattcttatgaataaatttggtaaacttgaaacaaacacac 24783934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 29512404 - 29512325
Alignment:
Q  140 cttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||| |||||| ||| ||||||||||||| |||||||||| ||| | || |||||||||||||||||||||||||||||||    
T  29512404 cttgaaataaaattcccatctttatattctaaggaatgtt-attcctaggaataaatttggtaaatttgaaacaaacacac 29512325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 44952120 - 44952033
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  44952120 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 44952033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 25902553 - 25902669
Alignment:
Q  15 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taa 112  Q
    ||||||||||| ||||||| |||||||||||| | || ||||||||||        ||||||| | ||||||||||||||||| ||||||| |||| |||    
T  25902553 gggggccaaaactgccacaaatgcaaaacttatgaggcggttttgtagttttttttcttagggagccaaaatcgcaactttgagaaagttagggggctaa 25902652  T
Q  113 aactgctattaagcctt 129  Q
    ||||| |||||||||||    
T  25902653 aactgatattaagcctt 25902669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 31611240 - 31611330
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    |||||||||| |||||||||||| ||| |||||||||||| ||||||||| |||||   |  ||||||||||||||| ||||||||||||||    
T  31611240 ttttctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcataagaataaatttggtaaacttgaaacaaacaca 31611330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 46359763 - 46359677
Alignment:
Q  133 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  46359763 taaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 46359677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 38177304 - 38177178
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| |||||||||||||||| || |||| ||||||||||||   ||||||||||||        ||||||||| ||||||||||||||||  |||    
T  38177304 tcaaaattggccttgggggccaaaaatgtcacatatgcaaaacttaaaaggtggttttgta-attttttcttagggggccaaaatcgcaactttgggaaa 38177206  T
Q  101 gttatgggg-taaaactgctattaagcc 127  Q
    |||| |||| ||||| ||| ||||||||    
T  38177205 gttaaggggctaaaattgccattaagcc 38177178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27178333 - 27178394
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| || ||||||| ||||| | ||||| ||||||||||||||||||||||||||||    
T  27178333 tcaaaattggcattgggggtcaaaactaccacagatgcaaaacttagggggtggttttgtag 27178394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 28124695 - 28124779
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 216  Q
    |||||| |||||||||||| ||||||| |||||||| ||||||||| ||| | | | |||||||||||||||| ||||||||||||    
T  28124695 ctaaattccttggaataaaattctcatatttatattccaaggaatg-ttaatcctaaaaataaatttggtaaacttgaaacaaaca 28124779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 27823087 - 27822996
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||||||||  |||||| ||||||| ||||| ||| || ||||||| ||| | | |||||||||||||||| |||||||||||||||    
T  27823087 ttttctaaataccttaaaataaaattctcatatttatgttcgaaagaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 27822996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 38140623 - 38140710
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 215  Q
    ||||||| ||||||||||||||| ||| || ||||||||| ||||||||| ||||| | ||||||||||||  |||| |||||||||||    
T  38140623 ttttctatataccttggaataaaattcacacctttatattccaaggaatg-ttattcctagaaataaattttataaaattgaaacaaac 38140710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 53165983 - 53166070
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||| | | |||||||||| ||||||||||| |||||   ||||||||||| | |||| |||||||||||||||    
T  53165983 ctaaataccttggaataaaatacccatctttatatttcaaggaatg-ttattcttagaaataaattggataaacttgaaacaaacacac 53166070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 3192862 - 3192774
Alignment:
Q  39 aaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcc 127  Q
    ||||||||||||  ||||||||||       |||||||| | |||| ||||||||||||||||||| ||| ||||||| ||||||||||    
T  3192862 aaaacttaggggtcggttttgtagttttttccttaggggatgaaaagcgcaactttgaaaaagttaggggctaaaacttctattaagcc 3192774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 6231761 - 6231847
Alignment:
Q  133 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| |||  ||||||||||| ||||||||||| ||| | || |||||||||| |||| |||||||||||||||    
T  6231761 taaattccttggaataaaattcctatctttatatttcaaggaatgtt-attcctaggaataaatttgataaacttgaaacaaacacac 6231847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 26849400 - 26849491
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||||||||| |||||| ||  ||||||||||||| | |||   ||||| | | |||||||||||||||| || ||||||||||||    
T  26849400 ttttctaaataccttgaaataaaatttccatctttatattccaagaaatattattcctaaaaataaatttggtaaacttaaaacaaacacac 26849491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 25154381 - 25154496
Alignment:
Q  15 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatggggt-aa 112  Q
    ||||||||||| ||| |||  ||||||||||| |||| ||||||||||        |||||| |||||||||| ||||||||  ||||||| ||||| ||    
T  25154381 gggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagttttttttcttaggaggtcaaaatcacaactttggtaaagttagggggttaa 25154480  T
Q  113 aactgctattaagcct 128  Q
    ||||||||||||||||    
T  25154481 aactgctattaagcct 25154496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25843493 - 25843443
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttaggggg 51  Q
    |||||||| ||||||||| |||||| ||||||| |||||||||||||||||    
T  25843493 tcaaaattggccttggggaccaaaactgccacagatgcaaaacttaggggg 25843443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 32071080 - 32070999
Alignment:
Q  134 aaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 215  Q
    ||||||||||||||||| |||||||||||||||| |||| |||| |||||   || |||||||||| ||||||| ||||||||    
T  32071080 aaataccttggaataaaattctcatctttatattccaagaaatg-ttattcataggaataaatttgataaatttaaaacaaac 32070999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 3192982 - 3193096
Alignment:
Q  15 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggggt-aaa 113  Q
    ||||||||||| ||  |||  |||||||||||||||  ||||||| ||       ||||||||||||||||||||||||    ||||||| ||||| |||    
T  3192982 gggggccaaaactgttacagttgcaaaacttaggggtcggttttgaagtttttttcttagggggtcaaaatcgcaacttcttgaaagttagggggtgaaa 3193081  T
Q  114 actgctattaagcct 128  Q
    |||||||||||||||    
T  3193082 actgctattaagcct 3193096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33329803 - 33329864
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| | |||||||||||||| ||||||| |||||| |||||||||  ||||||||||    
T  33329803 tcaaaattggtcttgggggccaaaactgccacaaatgcaatacttaggggacggttttgtag 33329864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 1814773 - 1814866
Alignment:
Q  34 catgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatg-gggtaaaactgctattaagc 126  Q
    |||||||||||||||||  ||||||||||       ||||||||  |||||||| ||||||| |||||||| | || |||||||||||||||||    
T  1814773 catgcaaaacttaggggacggttttgtagtttttttcttaggggtccaaaatcgaaactttggaaaagttaggaggctaaaactgctattaagc 1814866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 12228509 - 12228600
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||| |||||||||| ||||||| |||||||||||||| |||||  |||| ||||| |||  |||||||||| |||| ||| |||||||||||    
T  12228509 ttttttaaataccttagaataaaattctcatctttatatttcaaataatg-ttattcccaagaataaatttgataaacttgtaacaaacacac 12228600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 43747479 - 43747527
Alignment:
Q  14 tgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||||||| ||||| | ||||||||||||||||| ||||||||||    
T  43747479 tgggggccaaaactgccataaatgcaaaacttagggggcggttttgtag 43747527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 49216116 - 49216076
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc 168  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  49216116 ttttctaaataccttggaataaaattcccatctttatattc 49216076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 14349365 - 14349423
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 128  Q
    ||||||||| ||||||||||||| | |||||||| ||||  ||||||||||||||||||    
T  14349365 ttagggggttaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 14349423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 28204537 - 28204479
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 128  Q
    ||||||||||||||||||||||| |  ||||||| ||||  ||||||||||||||||||    
T  28204537 ttagggggtcaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagcct 28204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 33329669 - 33329611
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagtta-tggggtaaaactgctattaagcc 127  Q
    |||||||||||||||||||||||| | ||||||||  |||  |||||||||||||||||    
T  33329669 cttagggggtcaaaatcgcaacttcgtaaaagttagagggcgaaaactgctattaagcc 33329611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 54464290 - 54464163
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    ||||||||  ||||||||| ||||| ||||||| ||||||||||||||||   |||||||||        |||| ||| ||||||||| ||||||  |||    
T  54464290 tcaaaattgaccttgggggtcaaaactgccacatatgcaaaacttaggggacagttttgtagttctttttcttaagggatcaaaatcgtaactttagaaa 54464191  T
Q  100 agttatggg-gtaaaactgctattaagc 126  Q
    ||||| |||  |||||||||||||||||    
T  54464190 agttaggggactaaaactgctattaagc 54464163  T

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Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 9320719 - 9320795
Alignment:
Q  143 ggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||| |||||||||||||||| ||||||||| ||||| | |  |||||||||  |||| |||||||||||||||    
T  9320719 ggaataaaattctcatctttatattccaaggaatg-ttattcctatgaataaatttcataaacttgaaacaaacacac 9320795  T

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Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 28712683 - 28712777
Alignment:
Q  36 tgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctt 129  Q
    |||||||||||||||| | ||||||||       ||||||||| ||||||| ||||||   |||||||| ||||  |||||||||||||||||||    
T  28712683 tgcaaaacttagggggcgattttgtagtttttttcttagggggccaaaatcacaacttcataaaagttagggggcgaaaactgctattaagcctt 28712777  T

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Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 2566492 - 2566524
Alignment:
Q  186 agaaataaatttggtaaatttgaaacaaacaca 218  Q
    |||||||||||||||||| ||||||||||||||    
T  2566492 agaaataaatttggtaaacttgaaacaaacaca 2566524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 20297605 - 20297518
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| ||||| |||||| ||| ||||||||||||| || ||||||| ||| | |  ||||||||||||||| || ||||||||||||    
T  20297605 ctaaattccttgaaataaaattcccatctttatattccaaagaatgtt-attcctaagaataaatttggtaaacttaaaacaaacacac 20297518  T

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Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 28712582 - 28712489
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaacttt 94  Q
    ||||| || |||||||| || |||| ||| ||| ||||||||||||||||| | ||||||||       ||||||||| ||||||| |||||||    
T  28712582 tcaaagttggccttgggtgctaaaactgctacagatgcaaaacttagggggcgattttgtagtttttttcttagggggccaaaatcacaacttt 28712489  T

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Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 28944154 - 28944106
Alignment:
Q  3 aaaattagccttgggggccaaaattgccacacatgcaaaacttaggggg 51  Q
    |||||| |||||||||||||||| ||| |||  ||||||||||||||||    
T  28944154 aaaattggccttgggggccaaaactgctacatgtgcaaaacttaggggg 28944106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36677697 - 36677745
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttaggg 49  Q
    ||||||||  |||||| |||||||||||||||| ||||||| |||||||    
T  36677697 tcaaaattgaccttggaggccaaaattgccacaaatgcaaatcttaggg 36677745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 124
Target Start/End: Original strand, 36677783 - 36677827
Alignment:
Q  81 aaaatcgcaactttg-aaaaagttatggggtaaaactgctattaa 124  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||    
T  36677783 aaaatcgcaactttggaaaaatttagggggtaaaactgctattaa 36677827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 78)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 37192334 - 37192247
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  37192334 ctaaattccttggaataaaattctcatctttatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 37192247  T

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Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 14943731 - 14943861
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    ||||||||||||||||||||||||| |||||||  |||||||||||| ||| ||||||||||       |||| | |  ||||||| |||||||| ||||    
T  14943731 tcaaaattagccttgggggccaaaaatgccacaggtgcaaaacttagagggcggttttgtagtttttttctta-gagaccaaaatcacaactttggaaaa 14943829  T
Q  101 gttatgggg-taaaactgctattaagcctttt 131  Q
    |||| |||| ||||||||||||||||||||||    
T  14943830 gttaaggggctaaaactgctattaagcctttt 14943861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 37233242 - 37233149
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacacagtgat 225  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| ||||||||||||||| |||||    
T  37233242 ctaaataccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacacggtgat 37233149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 13760783 - 13760692
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | |||||||||||||| ||| |||||||||||||||    
T  13760783 ttttctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctagaaataaatttggcaaacttgaaacaaacacac 13760692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 17965795 - 17965708
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  17965795 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 17965708  T

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Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 5003096 - 5003181
Alignment:
Q  134 aaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||| ||| | | ||||||||||||||||||| ||||||||||||    
T  5003096 aaataccttggaataaaattcgcatctttatattccaaggaatgtt-attcctataaataaatttggtaaattttaaacaaacacac 5003181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 43028921 - 43028791
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| ||| | | |||||||| ||||||| ||||||||||||||||| ||||||||||        ||||||||| |||||||||||||||| | |    
T  43028921 tcaaaattggccctagaggccaaaactgccacagatgcaaaacttaggggg-ggttttgtagttttttttcttagggggccaaaatcgcaactttggaga 43028823  T
Q  100 agttatgggg-taaaactgctattaagccttt 130  Q
    ||||| |||| |||||||||||||||||||||    
T  43028822 agttagggggctaaaactgctattaagccttt 43028791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 3902273 - 3902181
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacaca 220  Q
    ||||||||||| ||||||||||| ||| |||||||||| ||||||||||| ||||| | | |||||||| ||||||| ||||||||||||||||    
T  3902273 ttttctaaatatcttggaataaaattcccatctttatatttcaaggaatg-ttattcctaaaaataaatatggtaaacttgaaacaaacacaca 3902181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 34679225 - 34679095
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggt-ggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| | ||||| |||||||| |||||||  ||||||||||||||||  |||||||||        |||||| || |||||||||||||||| |||    
T  34679225 tcaaaatttgtcttggaggccaaaactgccacatgtgcaaaacttaggggggcggttttgtaatttttttcttaggtggccaaaatcgcaactttggaaa 34679126  T
Q  100 agttatgggg-taaaactgctattaagcctt 129  Q
    ||||| |||| ||||||||||||||||||||    
T  34679125 agttagggggctaaaactgctattaagcctt 34679095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 346604 - 346691
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  346604 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 346691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 4559371 - 4559284
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| |||   |||||||||||||||||| |||||||||||||||    
T  4559371 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcttagaaataaatttggtaaacttgaaacaaacacac 4559284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 6171603 - 6171516
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  6171603 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 6171516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 28311955 - 28312042
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||| ||||| | |  ||||||||||||||| |||||||||||||||    
T  28311955 ctaaataccttggaataaaattcccatctttatattccaaggaatg-ttattcctatgaataaatttggtaaacttgaaacaaacacac 28312042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 40569834 - 40569743
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||||||| ||  ||| | ||||||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  40569834 ttttctaaataccttggaataaaatttacatatatatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 40569743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 5470523 - 5470650
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| |||||||||||||||| ||||||| ||| |||||||| |||| ||||||||||        |||||||| |||||||||||||||   |||    
T  5470523 tcaaaattggccttgggggccaaaactgccacagatgtaaaacttaaggggcggttttgtagttttttt-ttagggggccaaaatcgcaactttaggaaa 5470621  T
Q  101 gttatgggg-taaaactgctattaagcct 128  Q
    |||| |||| |||||||||||| ||||||    
T  5470622 gttagggggctaaaactgctataaagcct 5470650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 6592782 - 6592723
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 128  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||    
T  6592782 cttagggggtcaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcct 6592723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 129
Target Start/End: Complemental strand, 21361999 - 21361879
Alignment:
Q  10 gccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggg 108  Q
    |||||||| ||||||| |||||||  |||||||||||||||||| ||||||||        |||| |||| ||||||||||||||||| ||||||| |||    
T  21361999 gccttgggagccaaaactgccacatgtgcaaaacttagggggtgtttttgtagttttttttcttaaggggccaaaatcgcaactttgataaagttagggg 21361900  T
Q  109 gtaaaactgctattaagcctt 129  Q
      |||| ||||||||||||||    
T  21361899 caaaaattgctattaagcctt 21361879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 25333626 - 25333498
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| ||||||| | |||||| |||||||  ||||||||||||||||||||||| |||       |||| |||  |||||||||||||||| ||||    
T  25333626 tcaaaattggccttggagaccaaaactgccacaggtgcaaaacttagggggtggttttatagtttttttcttaagggaccaaaatcgcaactttggaaaa 25333527  T
Q  101 gttatgggg-taaaactgctattaagcct 128  Q
    |||| |||| ||||| || ||||||||||    
T  25333526 gttaaggggttaaaattgttattaagcct 25333498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 39918562 - 39918434
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| ||||||||||||||||  |||||| ||||||||||||| ||| | ||||| ||        ||||||||| ||||||||||||||||| ||    
T  39918562 tcaaaattggccttgggggccaaaacagccacatatgcaaaacttagcgggcgattttgcagttttttttcttagggggccaaaatcgcaactttgagaa 39918463  T
Q  100 agttatgggg-taaaactgctattaagcc 127  Q
    ||||| |||| ||||||| ||||||||||    
T  39918462 agttagggggctaaaactactattaagcc 39918434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 9734105 - 9734190
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacac 217  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | |||||||||||||||||| || ||||||||||    
T  9734105 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctagaaataaatttggtaaacttaaaacaaacac 9734190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 128
Target Start/End: Original strand, 14489407 - 14489525
Alignment:
Q  10 gccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg 109  Q
    |||||||||||||||| |||||||  |||||||||||||||||| ||||||||       |||| |||| |||||||||||||| |  ||||||| ||||    
T  14489407 gccttgggggccaaaactgccacagttgcaaaacttagggggtgattttgtagtttttttctta-ggggccaaaatcgcaacttcgtgaaagttaggggg 14489505  T
Q  110 -taaaactgctattaagcct 128  Q
      ||||||||||||||||||    
T  14489506 cgaaaactgctattaagcct 14489525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34760975 - 34760914
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| | |||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  34760975 tcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtag 34760914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 40951118 - 40951202
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 216  Q
    |||||| | |||||||||| || |||||||||||||| |||||||||| ||| | || ||||||||||||||||||||||||||||    
T  40951118 ctaaattctttggaataaaattttcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaatttgaaacaaaca 40951202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 2050678 - 2050591
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | | ||||||||||| |||| |||||||||||||||    
T  2050678 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaaaaataaatttgataaacttgaaacaaacacac 2050591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 2609286 - 2609399
Alignment:
Q  12 cttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagtta-tggggt 110  Q
    |||||||| ||||| ||||||| ||| |||||||| |||| | ||||||||       ||||||||  ||||||||||||||||||||||||| || | |    
T  2609286 cttgggggtcaaaactgccacatatgtaaaacttatggggcgattttgtagtttttttcttaggggaccaaaatcgcaactttgaaaaagttattgagtt 2609385  T
Q  111 aaaactgctattaa 124  Q
    ||||||||||||||    
T  2609386 aaaactgctattaa 2609399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 11071417 - 11071330
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  11071417 ctaaattccttggaataaaattcccatctttatatttcaaggaatgtt-attcctatgaataaatttggtaaacttgaaacaaacacac 11071330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 14777757 - 14777844
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  14777757 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 14777844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 18713911 - 18714002
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||| ||||||||||  |||||||||||||||| ||||||||| ||||| | | |||||||||||||||  ||||| |||||||||    
T  18713911 ttttctaaatatcttggaataatattctcatctttatattccaaggaatg-ttattcctataaataaatttggtaagcttgaatcaaacacac 18714002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 20426737 - 20426828
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||||| ||| |||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| || ||||||||||||    
T  20426737 ttttctaaatacattgaaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaactttaaacaaacacac 20426828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 37533765 - 37533678
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||| ||||| |||||||||| ||| | |||||||||||| ||||| |||||||||||||||    
T  37533765 ctaaattccttggaataaaattcccatctttttattccaaggaatgtt-attcctagaaataaatttagtaaacttgaaacaaacacac 37533678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 39819506 - 39819415
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||||||| |||||||| ||  ||||||||||||| || ||||||| ||| | |  |||||||||||||||||||||||||||||||    
T  39819506 ttttctaaatacctgggaataaaatttccatctttatattccaaagaatgtt-attcctatgaataaatttggtaaatttgaaacaaacacac 39819415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 41729389 - 41729476
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  41729389 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 41729476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44617925 - 44617985
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 61  Q
    |||||||| | |||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  44617925 tcaaaattggtcttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgta 44617985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 1623167 - 1623078
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    |||||||||||| ||| |||||| ||||||||||||||||| ||| |||||| ||||| || ||||||||| ||||| ||||||||||||||    
T  1623167 ttttctaaatac-ttgaaataaaattctcatctttatattccaagaaatgtt-attactaggaataaatttagtaaaattgaaacaaacaca 1623078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 3254347 - 3254437
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    ||||||||||||||| ||||||| ||||||| |||||||| ||| ||||| ||||| | | |||||||||||||||| || |||||||||||    
T  3254347 ttttctaaataccttagaataaaattctcatttttatattccaaagaatg-ttattcctaaaaataaatttggtaaacttaaaacaaacaca 3254437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 5770370 - 5770456
Alignment:
Q  133 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| |||  |||||||||||| |||||||||| ||| | ||||||||||||| |||| |||||||||||||||    
T  5770370 taaattccttggaataaaattcctatctttatattccaaggaatgtt-attcctagaaataaatttgataaacttgaaacaaacacac 5770456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 11763655 - 11763737
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaa 210  Q
    ||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||| | |  ||||||||||||||| ||||||    
T  11763655 ttttctagataccttggaataaaattctcatctttatattccaaggaatg-ttattcctaagaataaatttggtaaacttgaaa 11763737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 31827639 - 31827524
Alignment:
Q  15 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatggggt-aa 112  Q
    ||||||||||| || |||| ||||||| ||||||||||| ||||||||        ||||||||| ||||||| |||||||| |||||||| || || ||    
T  31827639 gggggccaaaactggcacagatgcaaagcttagggggtgattttgtagtcttttttcttaggggggcaaaatcacaactttggaaaagttagggagttaa 31827540  T
Q  113 aactgctattaagcct 128  Q
    ||||||||||||||||    
T  31827539 aactgctattaagcct 31827524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 14832627 - 14832535
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacaca 220  Q
    ||||||||||| || |||||||| || |||||||||||||  |||||||||| |||    ||||||||||||||||| ||||||||||||||||    
T  14832627 ttttctaaatatctaggaataaaattatcatctttatattttaaggaatgtt-attcttggaaataaatttggtaaacttgaaacaaacacaca 14832535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16043208 - 16043269
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| |||||||||||||||| ||||||| ||||||||| ||||||| |||| |||||    
T  16043208 tcaaaattggccttgggggccaaaactgccacagatgcaaaacatagggggcggttctgtag 16043269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 31827721 - 31827850
Alignment:
Q  3 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagt 102  Q
    |||||| |||||||||||||||| ||| |||  |||||||||||||||||| |||||||        |||||| ||||| ||||||||||| | ||||||    
T  31827721 aaaattggccttgggggccaaaactgctacagttgcaaaacttagggggtgattttgta-tttttttcttaggaggtcataatcgcaacttcgtaaaagt 31827819  T
Q  103 tatgggg-taaaactgctattaagccttttc 132  Q
    || ||||  |||| |||||||||||| ||||    
T  31827820 tagggggcgaaaattgctattaagccatttc 31827850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37431671 - 37431610
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| |||||||||||||||| ||||||| ||||||||||||| ||| | ||||||||    
T  37431671 tcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagtgggcgattttgtag 37431610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 45693999 - 45693915
Alignment:
Q  134 aaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    |||| |||||||||||| ||||||||||||| ||| |||||||||| ||| | |  ||||||||||||||| ||||||||||||||    
T  45693999 aaatgccttggaataaaattctcatctttatgttccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacaca 45693915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 7007401 - 7007310
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||||| || ||||||| |||||||||||||| |||||| |||| ||||| | |  ||||||||||||||| || ||||||||||||    
T  7007401 ttttctaaatactttagaataaaattctcatctttatatttcaagaaatg-ttattcctaataataaatttggtaaacttaaaacaaacacac 7007310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8857174 - 8857114
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 61  Q
    |||||||| || ||||||||||||| ||||||| |||||||||||||| || |||||||||    
T  8857174 tcaaaattggcattgggggccaaaactgccacaaatgcaaaacttaggaggcggttttgta 8857114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 16043203 - 16043086
Alignment:
Q  15 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttg-aaaaagttatggggtaa 112  Q
    |||||||||||||| |||| ||||||||  ||||||  ||||||||||        ||||||||| ||||| |||||||||| ||||||||| ||| |||    
T  16043203 gggggccaaaattgtcacaaatgcaaaagataggggacggttttgtagttttttttcttagggggccaaaaccgcaactttggaaaaagttaggggataa 16043104  T
Q  113 aactgctattaagccttt 130  Q
    ||||| ||||||||||||    
T  16043103 aactgttattaagccttt 16043086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 23943979 - 23943888
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||| | ||  |||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  23943979 ttttctaaattctttacaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 23943888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 42674920 - 42675007
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||  |||||||||||| ||| |||||| ||| | || ||||||||||||||| |||||||||||||||    
T  42674920 ctaaattccttggaataaaattcctatctttatattccaagaaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 42675007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 638405 - 638319
Alignment:
Q  133 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| || || |||||||||    
T  638405 taaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttaaatcaaacacac 638319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 214
Target Start/End: Complemental strand, 13539485 - 13539399
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaa 214  Q
    |||||||||||  || ||||||| ||||||||||||| ||| ||| |||||| || |||| |||||||||||||||| ||||||||||    
T  13539485 ttttctaaatattttagaataaaattctcatctttatgttccaagaaatgtt-atcaccaaaaataaatttggtaaacttgaaacaaa 13539399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 25375129 - 25375188
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 128  Q
    ||||||||| |||||||||||| |||||||| ||| |||| |||||||||||||||||||    
T  25375129 cttagggggccaaaatcgcaacattgaaaaaattagggggctaaaactgctattaagcct 25375188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 43028981 - 43029109
Alignment:
Q  3 aaaattagccttg-ggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||| |||||| |||||||||| ||| |||  || ||||||||||||| ||||||||||        ||||||||| ||||||||||||||||  |||    
T  43028981 aaaattggccttgtggggccaaaactgctacaattgtaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgtgaaa 43029080  T
Q  101 gttatggggtaaaactgctattaagcctt 129  Q
    |||| |||  |||||||||||||| ||||    
T  43029081 gttaagggcaaaaactgctattaaacctt 43029109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 45409063 - 45408981
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaa 214  Q
    ||||||||||||||||||| |||||||||||||||| |||  |||| ||||| | || ||||||||||||||| || |||||||    
T  45409063 ctaaataccttggaataaaattctcatctttatattccaataaatg-ttattcctaggaataaatttggtaaacttaaaacaaa 45408981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 21737668 - 21737753
Alignment:
Q  133 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    ||||| |||||||||||| ||| ||| ||||||||| |||||||||| ||| | |  ||||||||||||||| ||||||||||||||    
T  21737668 taaattccttggaataaaattcccatatttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacaca 21737753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6592854 - 6592805
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggg 50  Q
    ||||||||||| ||| ||||||||| ||||||| ||||||||||||||||    
T  6592854 tcaaaattagcattgagggccaaaactgccacatatgcaaaacttagggg 6592805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 14489341 - 14489211
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| | ||||| || ||||| |||||||  |||||||||||||||| |||||||||        |||| |||| ||||||| |||||||   |||    
T  14489341 tcaaaattggtcttggaggtcaaaactgccacaggtgcaaaacttagggggcggttttgtaatttttttcttaaggggccaaaatcacaacttttggaaa 14489242  T
Q  101 gtta-tggggtaaaactgctattaagccttt 130  Q
    ||||  ||| |||||||||||||||||||||    
T  14489241 gttagagggctaaaactgctattaagccttt 14489211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 19399441 - 19399490
Alignment:
Q  80 caaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 128  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  19399441 caaaatcacaactttgaaaaagttagggggctaaaactgctattaagcct 19399490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32969685 - 32969624
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| |||||||| ||||||| ||||||| ||| ||||||||||||| | ||||||||    
T  32969685 tcaaaattggccttgggagccaaaactgccacaaatgaaaaacttagggggcgattttgtag 32969624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 41196491 - 41196540
Alignment:
Q  79 tcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcct 128  Q
    |||||||| ||||||||||||||||| ||| |||||||||||| ||||||    
T  41196491 tcaaaatcacaactttgaaaaagttaagggttaaaactgctataaagcct 41196540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 25504 - 25452
Alignment:
Q  10 gccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||||| ||||| |||||||  |||||||||||||||| ||||||||||    
T  25504 gccttgggggtcaaaactgccacaggtgcaaaacttagggggcggttttgtag 25452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 15023039 - 15023152
Alignment:
Q  15 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaa 113  Q
    ||||||||||||||| |||  | |||||||||||||  ||||||||||       ||||||||||||||||| ||||||    ||||||| ||||  |||    
T  15023039 gggggccaaaattgctacagttacaaaacttaggggacggttttgtagtttttttcttagggggtcaaaatcacaacttcttgaaagttagggggccaaa 15023138  T
Q  114 actgctattaagcc 127  Q
    ||||||||||||||    
T  15023139 actgctattaagcc 15023152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 21358361 - 21358421
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaa-ctgctattaagcctt 129  Q
    ||||||||| ||||||| ||||||||| ||||||| |||| |||| |||||||||||||||    
T  21358361 cttagggggccaaaatcacaactttgagaaagttagggggcaaaaactgctattaagcctt 21358421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 24498162 - 24498106
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcc 127  Q
    ||||||||  |||||| ||||||||||||| ||| ||| ||||||||||||||||||    
T  24498162 ttagggggctaaaatcacaactttgaaaaaattaggggctaaaactgctattaagcc 24498106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 39918629 - 39918689
Alignment:
Q  3 aaaattagccttgggg-gccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||| ||||||||| ||||||||||| |||  |||||||||||||||| ||||||||||    
T  39918629 aaaattggccttggggggccaaaattgctacagttgcaaaacttagggggcggttttgtag 39918689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 5470453 - 5470394
Alignment:
Q  3 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||| |||||||||||||||| ||| |||  ||||||||||||||||  |||||||||    
T  5470453 aaaattggccttgggggccaaaactgctacaattgcaaaacttagggggcagttttgtag 5470394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 6510186 - 6510278
Alignment:
Q  2 caaaattagccttgggg-gccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactt 93  Q
    ||||||||| ||||||| ||||||| ||| |||  |||||||||||||||| ||||||||||       ||||||| | ||||||||||||||    
T  6510186 caaaattagtcttggggggccaaaactgctacagttgcaaaacttagggggcggttttgtagcttttttcttagggtgccaaaatcgcaactt 6510278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 26310071 - 26309993
Alignment:
Q  140 cttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    |||| |||||| ||| ||||||||||||| |||||||| | ||| | || ||||||||||||||| ||||||||||||||    
T  26310071 cttgtaataaaattcccatctttatattccaaggaatgct-attcctaggaataaatttggtaaacttgaaacaaacaca 26309993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 27358221 - 27358303
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaa 214  Q
    |||||||||||| |||||| |||||||||||||||| |||  |||| ||||| | || ||||||||||||||| || |||||||    
T  27358221 ctaaataccttgaaataaaattctcatctttatattccaataaatg-ttattcctaggaataaatttggtaaacttaaaacaaa 27358303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5008474 - 5008520
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttag 47  Q
    ||||||||  ||||| ||||||||||||||||| |||||||||||||    
T  5008474 tcaaaattgaccttgagggccaaaattgccacaaatgcaaaacttag 5008520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 19206267 - 19206141
Alignment:
Q  3 aaaattagccttggggg-ccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaag 101  Q
    |||||| |||||||||| |||||| ||| |||  || ||||||||||||||||||||||||        |||||||| ||||||||||||||||  |||     
T  19206267 aaaattggccttggggggccaaaactgctacagttgtaaaacttagggggtggttttgtagttttttt-ttagggggccaaaatcgcaactttgtgaaaa 19206169  T
Q  102 ttatgggg-taaaactgctattaagcct 128  Q
    ||| ||||  |||| |||||||||||||    
T  19206168 ttagggggcgaaaattgctattaagcct 19206141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24472633 - 24472683
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttaggggg 51  Q
    |||||||| || |||| |||||||| ||||||| |||||||||||||||||    
T  24472633 tcaaaattggcattggcggccaaaactgccacagatgcaaaacttaggggg 24472683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 13790106 - 13790018
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 216  Q
    |||| |||||||||| ||||||| ||  ||||| |||||| ||||||||||| ||| | | ||||||||||| |||| ||||||||||||    
T  13790106 ttttttaaataccttagaataaaatttacatctatatatttcaaggaatgtt-attcctacaaataaatttgataaacttgaaacaaaca 13790018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 36715560 - 36715609
Alignment:
Q  80 caaaatcgcaactttgaaaaagttatgg-ggtaaaactgctattaagcct 128  Q
    ||||||||||||||| ||||||||| || | |||||||||||||||||||    
T  36715560 caaaatcgcaactttaaaaaagttagggagctaaaactgctattaagcct 36715609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 4875592 - 4875552
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc 168  Q
    |||||||||||| |||||||||| ||| |||||||||||||    
T  4875592 ttttctaaatacattggaataaaattcacatctttatattc 4875552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 4925566 - 4925506
Alignment:
Q  2 caaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    ||||||| | ||| |||| ||||| ||||||| ||||||||||||||||  ||||||||||    
T  4925566 caaaattggtcttaggggtcaaaactgccacatatgcaaaacttaggggacggttttgtag 4925506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 14253325 - 14253254
Alignment:
Q  145 aataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 216  Q
    |||||| |||||||| |||||||| || ||||||| ||| | | ||||||||||||||||||| |||||||||    
T  14253325 aataaaattctcatccttatattccaaagaatgtt-attcctaaaaataaatttggtaaatttaaaacaaaca 14253254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 18969354 - 18969410
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatg-gggtaaaactgctattaag 125  Q
    ||||| ||||||||||||||||||||| ||||||| |  ||||||||| ||||||||    
T  18969354 cttagagggtcaaaatcgcaactttgagaaagttaagaaggtaaaactactattaag 18969410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 25411657 - 25411609
Alignment:
Q  13 ttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 61  Q
    |||||||  |||| ||||||| ||||||||||||||||| |||||||||    
T  25411657 ttgggggtgaaaactgccacagatgcaaaacttagggggcggttttgta 25411609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 9947246 - 9947337
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||| || |||||||||||| ||| |||||||||||| ||||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  9947246 ttttctacattccttggaataaaattcccatctttatattacaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 9947337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 11329805 - 11329718
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  11329805 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 11329718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 28472515 - 28472386
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| | ||||||||| |||| ||||||| | ||||||||||  ||| | ||||||||       |||||||||||||||||||||||||| ||||    
T  28472515 tcaaaattggtcttgggggcgaaaactgccacataagcaaaacttatagggcgattttgtagtttttt-cttagggggtcaaaatcgcaactttggaaaa 28472417  T
Q  101 gttatggggtaaaactgctattaagcctttt 131  Q
    |||| ||| ||||||||||||||||| ||||    
T  28472416 gttaggggctaaaactgctattaagcttttt 28472386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 37534361 - 37534447
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    |||||||||||| |||||| |||||||||||||||| ||||||||| ||||| | ||||||||||||| |||| ||||||||||||||    
T  37534361 ctaaataccttgaaataaaattctcatctttatattccaaggaatg-ttatttctagaaataaatttgataaacttgaaacaaacaca 37534447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 41243770 - 41243643
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| ||||||||| | |||| ||||||| |||||||||||| |||| ||||||||||       |||||||||  ||||| ||||||||| ||||    
T  41243770 tcaaaattggccttggggacaaaaactgccacaaatgcaaaactta-ggggcggttttgtagtttttttcttagggggctaaaattgcaactttggaaaa 41243672  T
Q  101 gttatgggg-taaaactgctattaagcct 128  Q
    |||| |||| |||||||||||||||||||    
T  41243671 gttagggggctaaaactgctattaagcct 41243643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 47909803 - 47909696
Alignment:
Q  19 gccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactg 117  Q
    ||||||||||||||| ||||||||||||||||| | ||||||||       |||||||||  |||||||||||||||  ||||||| |||| ||||||||    
T  47909803 gccaaaattgccacagatgcaaaacttagggggcgattttgtagtttttttcttagggggctaaaatcgcaactttgggaaagttagggggctaaaactg 47909704  T
Q  118 ctattaag 125  Q
    ||||||||    
T  47909703 ctattaag 47909696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15029189 - 15029058
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    ||||||||  ||||||||||||||| |||||||  |||||||||||||||| ||||||||||         ||||||||||||||||||||||||| |||    
T  15029189 tcaaaattgaccttgggggccaaaactgccacatgtgcaaaacttagggggcggttttgtagttttttttattagggggtcaaaatcgcaactttggaaa 15029090  T
Q  100 agtta----tggggtaaaactgctattaagcc 127  Q
    |||||    | || ||||||||||||||||||    
T  15029089 agttaggggttggttaaaactgctattaagcc 15029058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 36580473 - 36580591
Alignment:
Q  13 ttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagtt-atggggta 111  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||       |||   || ||||||||||||||||||||||||| | ||| ||    
T  36580473 ttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagcttttttcttgaaggatcaaaatcgcaactttgaaaaagttaaagggtta 36580572  T
Q  112 aaactgctattaagccttt 130  Q
    ||||| ||||||| |||||    
T  36580573 aaactactattaaaccttt 36580591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 18504371 - 18504246
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnnctta-gggggtcaaaatcgcaactttgaaa 98  Q
    |||||||| ||||| | |||||||| ||||||| ||||||||||||||||| ||||||||||        |||| ||||| ||||||| ||||||| |||    
T  18504371 tcaaaattggccttagaggccaaaactgccacatatgcaaaacttagggggcggttttgtagtattttttcttaggggggccaaaatcacaactttaaaa 18504272  T
Q  99 aagttatggggtaaaactgctattaa 124  Q
    |||||| ||| |||||||||||||||    
T  18504271 aagttaggggttaaaactgctattaa 18504246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 28904445 - 28904532
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||| ||||||| ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  28904445 ctaaattccttagaataaaattctcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 28904532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 35488448 - 35488535
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  35488448 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 35488535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 15107178 - 15107304
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| || |||| |||||||| ||||||| ||||||||||||||| | ||||||||||        |||||||| |||||||| ||||||| ||||    
T  15107178 tcaaaattggcattggaggccaaaactgccacaaatgcaaaacttagggagcggttttgtagtttttt--ttagggggccaaaatcgtaactttggaaaa 15107275  T
Q  101 gtta-tggggtaaaactgctattaagcct 128  Q
     |||  |||||||||||||||||||||||    
T  15107276 attaggggggtaaaactgctattaagcct 15107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 27214115 - 27214201
Alignment:
Q  133 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  27214115 taaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 27214201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 27248105 - 27248019
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| ||||||||||||||    
T  27248105 ctaaattccttggaataaaattcccatctttatattctaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacaca 27248019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 33378645 - 33378559
Alignment:
Q  133 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  33378645 taaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 33378559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 34930727 - 34930813
Alignment:
Q  133 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  34930727 taaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 34930813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 18186637 - 18186763
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn--cttagggggtcaaaatcgcaactttgaaa 98  Q
    |||||||| ||||||||| |||||| ||||||| |||||||||||| |||  |||||| |||         |||||||||||||||||| ||||||| ||    
T  18186637 tcaaaattggccttggggaccaaaactgccacagatgcaaaacttaagggacggttttatagtttttttttcttagggggtcaaaatcgtaactttggaa 18186736  T
Q  99 aagttatgggg-taaaactgctattaa 124  Q
    |||||| |||| |||||||||||||||    
T  18186737 aagttagggggctaaaactgctattaa 18186763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 28350244 - 28350113
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| | |||||||||||||| |||||||   ||||||||||||||| ||||||||||        ||||||||| |||||||| ||||| |  ||    
T  28350244 tcaaaattggtcttgggggccaaaactgccacaggggcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgtaacttcgtgaa 28350145  T
Q  100 agttatgggg-taaaactgctattaagccttt 130  Q
    ||||| |||| |||||||||||||||||||||    
T  28350144 agttagggggctaaaactgctattaagccttt 28350113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 44820066 - 44819981
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacac 217  Q
    |||||| |||||||||||| |||||||||||||| || |||||||| ||||| | | |||||||||||||||| |||||||||||||    
T  44820066 ctaaattccttggaataaaattctcatctttatattttaaggaatg-ttattcctaaaaataaatttggtaaacttgaaacaaacac 44819981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 18823974 - 18823890
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 216  Q
    ||||||||||| ||||||| |||||||||||||||| ||| ||||| ||||| | || ||||||||||||||| ||||||||||||    
T  18823974 ctaaataccttagaataaaattctcatctttatattccaaagaatg-ttattcctaggaataaatttggtaaacttgaaacaaaca 18823890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 6656725 - 6656817
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| ||||||||||||||||| ||||||| ||| |||| ||||||||||||||| | |  ||||||||| ||||| |||||| ||||||||    
T  6656725 ttttccaaataccttggaataaaattctcatatttctattccaaggaatgtttattcctaagaataaatttagtaaacttgaaagaaacacac 6656817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 17276414 - 17276505
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||| ||||||||||| ||  ||||| ||||||| |||||||||| ||| | |||||||||||| ||||| |||||||||||||||    
T  17276414 ttttctaaatatcttggaataaaatttacatctatatattccaaggaatgtt-attcctagaaataaattttgtaaaattgaaacaaacacac 17276505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 25924896 - 25924983
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| |||||   || |||||||||||||||  ||||||||||||||    
T  25924896 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcttaggaataaatttggtaaacatgaaacaaacacac 25924983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 27419479 - 27419570
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||||||| | |||||||||| ||| ||||||||||||| ||| |||||| ||| | | |||||||||||||||| |||||||||||||||    
T  27419479 ttttctaaattctttggaataaaattcccatctttatattccaagaaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 27419570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 43949057 - 43948970
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||| ||||    
T  43949057 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaatacac 43948970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 45265307 - 45265394
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  45265307 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 45265394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 48313934 - 48313847
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||| ||||||| ||||||||||||||||| ||| |||||| ||| | ||||||||||||| |||| |||||||||||||||    
T  48313934 ctaaattccttagaataaaattctcatctttatattccaagaaatgtt-attcctagaaataaatttgataaacttgaaacaaacacac 48313847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 30686250 - 30686336
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    |||||||||||| |||||| || ||||||||||||| ||||||||| ||||| | ||||||||||||| |||| || |||||||||||    
T  30686250 ctaaataccttgcaataaaattttcatctttatattccaaggaatg-ttattcctagaaataaatttgataaacttaaaacaaacaca 30686336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 48160833 - 48160919
Alignment:
Q  133 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||| ||||| |||||||||||||||    
T  48160833 taaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttagtaaacttgaaacaaacacac 48160919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3381989 - 3381929
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    ||||||||| |||||||| |||||| ||||||| ||||||||||||||||| ||||||||||    
T  3381989 tcaaaattaaccttgggg-ccaaaactgccacatatgcaaaacttagggggcggttttgtag 3381929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 14247562 - 14247615
Alignment:
Q  75 ggggtcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcct 128  Q
    |||||| |||||||||||||| |||||||| ||| |||||||||||||||||||    
T  14247562 ggggtcgaaatcgcaactttggaaaagttaggggataaaactgctattaagcct 14247615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 42256641 - 42256581
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatgggg--taaaactgctattaagcct 128  Q
    |||||||||  |||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  42256641 cttagggggctaaaatcgcaactttgaaaaagttaggggggttaaaactgctattaagcct 42256581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 4049909 - 4050038
Alignment:
Q  3 aaaattagccttgggg-gccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaag 101  Q
    |||||| ||||||||| ||||||| ||| |||  |||||| ||||||||| ||||||||||       ||||||||| ||||||| |||||| |  ||||    
T  4049909 aaaattggccttggggggccaaaactgctacagttgcaaaccttagggggcggttttgtagtttttttcttagggggccaaaatcacaacttcgtgaaag 4050008  T
Q  102 ttatgggg-taaaactgctattaagccttt 130  Q
    ||| ||||  ||||||||||||||||||||    
T  4050009 ttaaggggcgaaaactgctattaagccttt 4050038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 44565857 - 44565770
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||||||||||| ||  ||||||||||||| |||||||||| ||| | || |||||||||| |||| |||||||||||||||    
T  44565857 ctaaattccttggaataaaatttccatctttatattccaaggaatgtt-attcctaggaataaatttgataaacttgaaacaaacacac 44565770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 15348078 - 15347952
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    ||||||||  |||||||||||| || | ||||| |||||||||||| |||||||||||||||       |||| ||||||||||||||||||||   |||    
T  15348078 tcaaaattgaccttgggggccataacttccacagatgcaaaactta-ggggtggttttgtag-ttttttctta-ggggtcaaaatcgcaactttaggaaa 15347982  T
Q  101 gttatgggg-taaaactgctattaagcctt 129  Q
    |||| |||| |||||| |||||||||||||    
T  15347981 gttagggggctaaaacggctattaagcctt 15347952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 31598539 - 31598449
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    |||| ||||||||||| |||||| |||  |||||||||||| ||| |||||| ||| ||| |||||||||||||||| || |||||||||||    
T  31598539 ttttttaaataccttgaaataaaattcctatctttatattccaagaaatgtt-attcccaaaaataaatttggtaaacttaaaacaaacaca 31598449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 45045438 - 45045352
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 218  Q
    |||||| |||||||||||| ||| ||||||||||||| ||||||| || ||| | |  ||||||||||||||| ||||||||||||||    
T  45045438 ctaaattccttggaataaaattcccatctttatattccaaggaatatt-attcctaagaataaatttggtaaacttgaaacaaacaca 45045352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 48341174 - 48341089
Alignment:
Q  133 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||| |||||||||||| ||| | ||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  48341174 taaattccttggaataaaattccc-tctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 48341089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 20185045 - 20184915
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaactttgaaa 98  Q
    ||||||||  ||||||||||||||| || |||| |||||||||||| | || ||||||||||         |||||||||  ||||||||||||||| ||    
T  20185045 tcaaaattgaccttgggggccaaaactggcacatatgcaaaacttaagaggcggttttgtagtttttttttcttagggggctaaaatcgcaactttggaa 20184946  T
Q  99 aagttatgg-ggtaaaactgctattaagcct 128  Q
    |||||| || | |||||||| ||||||||||    
T  20184945 aagttagggagctaaaactgttattaagcct 20184915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 21505873 - 21505927
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatggg-gtaaaactgctatta 123  Q
    ||||||||| ||||||||||||||||||||||||| |||  ||||||||||||||    
T  21505873 cttagggggccaaaatcgcaactttgaaaaagttaggggactaaaactgctatta 21505927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 28785941 - 28786072
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag----nnnnnnncttagggggtcaaaatcgcaactttga 96  Q
    ||||||||||||||||||| ||||| ||||| | |||||||||||| ||||  |||||||||           ||||  ||| ||||||| ||||||||     
T  28785941 tcaaaattagccttgggggtcaaaactgccataaatgcaaaacttatggggcagttttgtagttttttttcttctta-agggccaaaatcacaactttgg 28786039  T
Q  97 aaaagttatgggg-taaaactgctattaagcct 128  Q
    ||||||||||||| |||||||||||||||||||    
T  28786040 aaaagttatggggttaaaactgctattaagcct 28786072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 6792017 - 6792107
Alignment:
Q  36 tgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaa 124  Q
    |||||||||||||||| ||||||||||        ||||||||  |||||||||||||||| |||||||| |||| |||||||||||||||    
T  6792017 tgcaaaacttagggggcggttttgtagttttttttcttaggggaccaaaatcgcaactttggaaaagttagggggctaaaactgctattaa 6792107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8074002 - 8073957
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaactta 46  Q
    |||||||| |||||||||||||||| ||||||| ||||||||||||    
T  8074002 tcaaaattggccttgggggccaaaactgccacatatgcaaaactta 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 15348145 - 15348274
Alignment:
Q  3 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||| |||||||||||||||| ||| ||   |||||||||||||||| ||||||||||         ||||| || ||||||||||||||| |  |||    
T  15348145 aaaattggccttgggggccaaaactgctacggttgcaaaacttagggggcggttttgtagtttttttttcttagaggatcaaaatcgcaacttcgtgaaa 15348244  T
Q  101 gttatggggt-aaaactgctattaagcctt 129  Q
    |||| ||||| || ||||||||||||||||    
T  15348245 gttagggggtgaatactgctattaagcctt 15348274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 19644858 - 19644800
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagccttt 130  Q
    ||||||||||||||||||||||||||||||  | |  || |||||||||||||||||||||    
T  19644858 cttagggggtcaaaatcgcaactttgaaaagttga--ggctaaaactgctattaagccttt 19644800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 39553994 - 39553910
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 216  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||||| |  |||||||||| |||| || |||||||||    
T  39553994 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattactaagaataaatttgataaacttcaaacaaaca 39553910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 5172711 - 5172815
Alignment:
Q  3 aaaattagccttggggg-ccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||| |||||||||| |||||| ||| |||  |||||||||||||||| ||||||||||         |||||||||||||||||||||||| | |||    
T  5172711 aaaattggccttgggggaccaaaactgctacagttgcaaaacttagggggcggttttgtagttttttttccttagggggtcaaaatcgcaacttcgtaaa 5172810  T
Q  100 agtta 104  Q
    |||||    
T  5172811 agtta 5172815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 14247408 - 14247291
Alignment:
Q  14 tgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatg-gggtaa 112  Q
    |||||||||||| |||||||  ||||||||||| |||| ||||||||||       |||||| || ||||||| |||||| |  ||||||| | ||  ||    
T  14247408 tgggggccaaaactgccacaattgcaaaacttatggggcggttttgtagtttttttcttaggcggccaaaatcacaacttcgtgaaagttaggtggcgaa 14247309  T
Q  113 aactgctattaagccttt 130  Q
    ||||||||||||||||||    
T  14247308 aactgctattaagccttt 14247291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 20185104 - 20185232
Alignment:
Q  3 aaaattagccttgggg-gccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaag 101  Q
    |||||||||||||||| ||||||| ||| |||  ||||||||||||| || ||||||||||        ||||||||||||||||||||||| |  ||||    
T  20185104 aaaattagccttggggggccaaaactgctacagttgcaaaacttaggaggcggttttgtagttttttt-ttagggggtcaaaatcgcaacttcgtgaaag 20185202  T
Q  102 ttatgggg-taaaactgctattaagccttt 130  Q
    ||| ||||  |||||| ||||||| |||||    
T  20185203 ttagggggcgaaaactactattaatccttt 20185232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 22156433 - 22156520
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 215  Q
    ||||||| ||||||| ||||||| |||| |||||||||||| ||  |||||| ||| | | ||||||||||| ||||||||||||||||    
T  22156433 ttttctatataccttagaataaaattcttatctttatattccaaaaaatgtt-attcctaaaaataaatttgataaatttgaaacaaac 22156520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 22212348 - 22212435
Alignment:
Q  128 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 215  Q
    ||||||| ||||||| ||||||| |||| |||||||||||| ||  |||||| ||| | | ||||||||||| ||||||||||||||||    
T  22212348 ttttctatataccttagaataaaattcttatctttatattccaaaaaatgtt-attcctaaaaataaatttgataaatttgaaacaaac 22212435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 35250374 - 35250434
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcctttt 131  Q
    |||||||||||||||||||||||||  ||||||| |||  ||||| |||||||| ||||||    
T  35250374 ttagggggtcaaaatcgcaactttgtcaaagttaggggcaaaaaccgctattaaacctttt 35250434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 127
Target Start/End: Original strand, 36903533 - 36903581
Alignment:
Q  80 caaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcc 127  Q
    |||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  36903533 caaaatcgcaacattgaaaaagttagggggttaaaactgctattaagcc 36903581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 45448742 - 45448667
Alignment:
Q  144 gaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||| ||| ||||||||||||| |||||||||| |||   || ||||||||||||||| |||||||||||||||    
T  45448742 gaataaaattcccatctttatattccaaggaatgtt-attcataggaataaatttggtaaacttgaaacaaacacac 45448667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 127
Target Start/End: Original strand, 12905792 - 12905839
Alignment:
Q  80 caaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcc 127  Q
    ||||||||||||||||||||||||| |||  |||||| ||||||||||    
T  12905792 caaaatcgcaactttgaaaaagttaggggccaaaactactattaagcc 12905839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 20505156 - 20505101
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaa 124  Q
    ||||||||| |||| |||||||||||| ||||||| |||| |||||||||||||||    
T  20505156 cttagggggccaaagtcgcaactttgagaaagttagggggctaaaactgctattaa 20505101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 38543998 - 38543920
Alignment:
Q  140 cttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaa-tttgaaacaaacac 217  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||| | |  ||||||||| ||||| ||||||||||||||    
T  38543998 cttggaataaaattctcatctttatattccaaggaatg-ttattcctaagaataaatttagtaaactttgaaacaaacac 38543920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 3318375 - 3318317
Alignment:
Q  71 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 128  Q
    |||||||  |||||||||||||||| |||||||| |||| ||||||| |||||||||||    
T  3318375 ttaggggaccaaaatcgcaactttggaaaagttaaggggctaaaactcctattaagcct 3318317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6726441 - 6726501
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    ||||||||  |||||||||| |||| |||||||  |||||||||||||||||| ||||||||    
T  6726441 tcaaaattgtccttgggggc-aaaactgccacatgtgcaaaacttagggggtgattttgtag 6726501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9500087 - 9500148
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| |||||||||||||||| | |||||    |||||||||||||| ||||||||||    
T  9500087 tcaaaattggccttgggggccaaaactaccacaaggtcaaaacttagggggcggttttgtag 9500148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 25097881 - 25097796
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 216  Q
    |||||| |||||||||||| |||||||||||||||| |||  ||   ||||| | || ||||||||||||||| || |||||||||    
T  25097881 ctaaattccttggaataaaattctcatctttatattccaaaaaaatattattcctaggaataaatttggtaaacttaaaacaaaca 25097796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36903390 - 36903341
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggg 50  Q
    |||||||| |||||| ||||||||| ||||||| ||| ||||||||||||    
T  36903390 tcaaaattggccttgagggccaaaactgccacagatggaaaacttagggg 36903341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 40212701 - 40212665
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc 168  Q
    |||||| |||||||||||| |||||||||||||||||    
T  40212701 ctaaattccttggaataaaattctcatctttatattc 40212665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 531 - 405
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaactttgaaa 98  Q
    |||||||| | |||||||||||||| ||||||| ||| ||||||||||||||||||||||||         ||||||||| |||||||||||||||||      
T  531 tcaaaattggtcttgggggccaaaactgccacatatgtaaaacttagggggtggttttgtagtttttttttcttagggggccaaaatcgcaactttgagg 432  T
Q  99 aagttatgggg-taaaactgctattaa 124  Q
    |||||| |||| |||| ||||||||||    
T  431 aagttagggggctaaagctgctattaa 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 201738 - 201651
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    |||||| |||| ||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  201738 ctaaattccttagaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 201651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 143430 - 143342
Alignment:
Q  128 ttttctaaataccttggaataaat-ttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 215  Q
    ||||| |||||||||| ||||||  ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||    
T  143430 ttttccaaataccttgaaataaaaattctcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaac 143342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 9539 - 9415
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 100  Q
    |||||||| ||||||||||| |||| ||||||| ||||||||||||||||  ||||||||||       ||||| |||  |||||| ||||||||  |||    
T  9539 tcaaaattggccttgggggctaaaactgccacatatgcaaaacttaggggacggttttgtagtttttttcttagagggcaaaaatcacaactttgggaaa 9440  T
Q  101 gttatgggg-taaaactgctattaa 124  Q
     ||| |||| |||||||||||||||    
T  9439 attagggggctaaaactgctattaa 9415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 145481 - 145377
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| |||||||||||||||| ||||||| |||||||| ||| |||| || |||||||        ||||||||| ||||||||||||||||| ||    
T  145481 tcaaaattggccttgggggccaaaactgccacagatgcaaaatttaaggggcggctttgtagttttttttcttaggggggcaaaatcgcaactttgagaa 145382  T
Q  100 agtta 104  Q
    |||||    
T  145381 agtta 145377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 19216 - 19276
Alignment:
Q  2 caaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    ||||||| |||||||||||||||| | |||||  |||||||||||||||| ||||||||||    
T  19216 caaaattggccttgggggccaaaactaccacatgtgcaaaacttagggggcggttttgtag 19276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 19600 - 19652
Alignment:
Q  73 agggggtcaaaatcgcaactttgaaaaagttatggg-gtaaaactgctattaa 124  Q
    |||||| ||||||||||||||||||||||||| |||  |||||||||||||||    
T  19600 agggggccaaaatcgcaactttgaaaaagttaggggactaaaactgctattaa 19652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 3697 - 3638
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 128  Q
    ||||||||| ||||||||||||||||  ||||||| |||| |||||||||||||||||||    
T  3697 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 3638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 3697 - 3638
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 128  Q
    ||||||||| ||||||||||||||||  ||||||| |||| |||||||||||||||||||    
T  3697 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 3638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 76989 - 76929
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 62  Q
    |||||||| ||||||||||| |||| ||||||| ||||||||||||||||| || |||||||    
T  76989 tcaaaattggccttgggggc-aaaactgccacaaatgcaaaacttagggggcggctttgtag 76929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 3824 - 3911
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||| |||  ||||||||||| ||||||||| |||||   || ||||||||||||  | |||||||||||||||    
T  3824 ctaaataccttggaataaaattcctatctttatattccaaggaatg-ttattcataggaataaatttggtgcacttgaaacaaacacac 3911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 4278 - 4191
Alignment:
Q  132 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 219  Q
    ||||||||||||||||||| |||  ||||||||||| ||||||||| |||||   || ||||||||||||  | |||||||||||||||    
T  4278 ctaaataccttggaataaaattcctatctttatattccaaggaatg-ttattcataggaataaatttggtgcacttgaaacaaacacac 4191  T

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Target: scaffold1458 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 1529 - 1470
Alignment:
Q  70 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 128  Q
    ||||||||| ||||||| ||||||||  ||||||| |||| |||||||||||||||||||    
T  1529 cttagggggccaaaatctcaactttgtgaaagttagggggctaaaactgctattaagcct 1470  T

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Target: scaffold0137 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20041 - 19910
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 99  Q
    |||||||| || ||||||||||||| ||||||| ||||||||||||| ||  | ||||||||        |||| |||| ||||||| ||||||| ||||    
T  20041 tcaaaattggctttgggggccaaaactgccacagatgcaaaacttagtggacgattttgtagttttttttctta-ggggccaaaatcacaactttaaaaa 19943  T
Q  100 agttatgggg-taaaactgctattaagcctttt 131  Q
    | ||| |||| ||||||||||||||||| ||||    
T  19942 atttagggggttaaaactgctattaagcttttt 19910  T

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Target: scaffold0578 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3203 - 3157
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttag 47  Q
    ||||||||  ||||| ||||||||||||||||| |||||||||||||    
T  3203 tcaaaattgaccttgagggccaaaattgccacaaatgcaaaacttag 3157  T

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Target: scaffold0372 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 171 - 122
Alignment:
Q  81 aaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctt 129  Q
    |||||||||||||||| ||||||| | || ||||||||||||||||||||    
T  171 aaaatcgcaactttgagaaagttaggaggctaaaactgctattaagcctt 122  T

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Target: scaffold0062 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 46261 - 46321
Alignment:
Q  1 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 61  Q
    ||||||||  ||||||||||||||| || |||| ||||||||||||| |||  ||||||||    
T  46261 tcaaaattgaccttgggggccaaaactgtcacagatgcaaaacttagagggcagttttgta 46321  T

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