View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9795A_low_125 (Length: 302)
Name: NF9795A_low_125
Description: NF9795A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9795A_low_125 |
 | |
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| [»] chr8 (3 HSPs) |
| |
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| [»] scaffold0009 (1 HSPs) |
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| [»] chr3 (1 HSPs) |
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| [»] chr1 (4 HSPs) |
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| [»] scaffold0911 (1 HSPs) |
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| [»] scaffold0437 (1 HSPs) |
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| [»] scaffold0068 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 275; Significance: 1e-154; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 16290528 - 16290238
Alignment:
| Q |
12 |
agatggacatcaaagaagggttggaaaaaatcaacaaagcactagatgagtcactttccaaccaaagattgcgccatccacgagaggacgcatgttccat |
111 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
16290528 |
agatgggcaccaaagaagggttggaaaaaatcaacaaagcactagatgagtcactttccaaccaaagattgcgccatccacgagaggacgcatgttccat |
16290429 |
T |
|
| Q |
112 |
ggataaaataatagcaagaacttcataatgatagaccgatgcctccccaacattacaacagaaagcaccaagaaaagagcccctagagtcacgaaagagg |
211 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16290428 |
ggataaaataatagcaagaactttagaatgatagaccgatgcctccccaacattacaacagaaagcaccaagaaaagagcccctagagtcacgaaagagg |
16290329 |
T |
|
| Q |
212 |
ccaccacaagccgcctggccagcgataacagaaccatcagtattaactttcaaccaaggaggggatggagccttccacaacaccgggatga |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
16290328 |
ccaccacaagccgcctggccagcgataacagaaccatcagtattaactttcaaccaaggaggggatggagccttccacaacaccgggatga |
16290238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 46 - 302
Target Start/End: Complemental strand, 19750233 - 19749977
Alignment:
| Q |
46 |
caaagcactagatgagtcactttccaaccaaagattgcgccatccacgagaggacgcatgttccatggataaaataatagcaagaacttcataatgatag |
145 |
Q |
| |
|
|||||||||||||||||||||||||||||| | | ||||| ||| |||||||||| || ||||||| |||||||||||||||| ||| |||| || |
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|
| T |
19750233 |
caaagcactagatgagtcactttccaaccagatgtgccgccacccatgagaggacgcgtgctccatggctaaaataatagcaagacctttcgaatggtaa |
19750134 |
T |
|
| Q |
146 |
accgatgcctccccaacattacaacagaaagcaccaagaaaagagcccctagagtcacgaaagaggccaccacaagccgcctggccagcgataacagaac |
245 |
Q |
| |
|
||||| |||||||||| |||||| |||| |||||||| ||||||||| ||||||| |||||||| || ||||||||||| |||||| | || ||||||| |
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|
| T |
19750133 |
accgaggcctccccaatgttacaagagaacgcaccaaggaaagagcccgtagagtctcgaaagagaccgccacaagccgcgtggccatcaatgacagaac |
19750034 |
T |
|
| Q |
246 |
catcagtattaactttcaaccaaggaggggatggagccttccacaacaccgggatga |
302 |
Q |
| |
|
||||||| |||||||||| |||||||| || |||||||||||||||||||||||||| |
|
|
| T |
19750033 |
catcagtgttaactttcatccaaggagaggttggagccttccacaacaccgggatga |
19749977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 26867126 - 26867058
Alignment:
| Q |
23 |
aaagaagggttggaaaaaatcaacaaagcactagatgagtcactttccaaccaaagattgcgccatcca |
91 |
Q |
| |
|
|||||||| || |||||||| || | |||||| || ||||||||||||||||||| ||| ||||||||| |
|
|
| T |
26867126 |
aaagaaggattcgaaaaaattaaaatagcacttgaggagtcactttccaaccaaacatttcgccatcca |
26867058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 12 - 302
Target Start/End: Original strand, 1894 - 2184
Alignment:
| Q |
12 |
agatggacatcaaagaagggttggaaaaaatcaacaaagcactagatgagtcactttccaaccaaagattgcgccatccacgagaggacgcatgttccat |
111 |
Q |
| |
|
|||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |
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|
| T |
1894 |
agatgggcaccaaagaagggttggaaataatcaacaaagcactagatgagtcactttccaaccaaagatttcgccatccacgagaggacgcatactccat |
1993 |
T |
|
| Q |
112 |
ggataaaataatagcaagaacttcataatgatagaccgatgcctccccaacattacaacagaaagcaccaagaaaagagcccctagagtcacgaaagagg |
211 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1994 |
ggataaaataatagcaagaacttcagaatgataaaccgatgcctccccaacattacaacataaagcaccaagaaaagagcccctagagtcacgaaagagg |
2093 |
T |
|
| Q |
212 |
ccaccacaagccgcctggccagcgataacagaaccatcagtattaactttcaaccaaggaggggatggagccttccacaacaccgggatga |
302 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
2094 |
ccaccacaagccgcatggccagcgataacagaaccatctgtattaactttcaaccaaggaggggatggagccttccacagcaccgggatga |
2184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 25759697 - 25759407
Alignment:
| Q |
12 |
agatggacatcaaagaagggttggaaaaaatcaacaaagcactagatgagtcactttccaaccaaagattgcgccatccacgagaggacgcatgttccat |
111 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| | ||||| |
|
|
| T |
25759697 |
agatgggcaccaaagaagggttggaaaaaatcaacaaagcactagatgagtcactttccaaccaaagatttcgccatctacgagaggacgcacgctccat |
25759598 |
T |
|
| Q |
112 |
ggataaaataatagcaagaacttcataatgatagaccgatgcctccccaacattacaacagaaagcaccaagaaaagagcccctagagtcacgaaagagg |
211 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25759597 |
ggataaaataatagcaaggacttcagaatgataaaccgatgcctccccaacgttacaacagaaagcaccaagaaaagagcccctagagtcacgaaagagg |
25759498 |
T |
|
| Q |
212 |
ccaccacaagccgcctggccagcgataacagaaccatcagtattaactttcaaccaaggaggggatggagccttccacaacaccgggatga |
302 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
25759497 |
ccaccacaagccgcatggccagcgataacagaaccatcagtattaactttcaaccaaggagggaatggagccttccacaacaccggaatga |
25759407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 142; Significance: 2e-74; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 22 - 295
Target Start/End: Original strand, 24271216 - 24271489
Alignment:
| Q |
22 |
caaagaagggttggaaaaaatcaacaaagcactagatgagtcactttccaaccaaagattgcgccatccacgagaggacgcatgttccatggataaaata |
121 |
Q |
| |
|
|||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||| ||||| ||| || |||||| || |||||||||||||| |
|
|
| T |
24271216 |
caaagaagagttggaaataatcagcaaagcactagatgagtcactttccaaccagatattacgccacccatgaaaggacgtgtgctccatggataaaatg |
24271315 |
T |
|
| Q |
122 |
atagcaagaacttcataatgatagaccgatgcctccccaacattacaacagaaagcaccaagaaaagagcccctagagtcacgaaagaggccaccacaag |
221 |
Q |
| |
|
||||||||||||||| |||| || || ||||||||||||| ||| |||| ||||||| ||| ||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
24271316 |
atagcaagaacttcagaatggtaaactgatgcctccccaatgttataacataaagcactaaggaaagagcccctagagtctcgaaagagaccaccacaag |
24271415 |
T |
|
| Q |
222 |
ccgcctggccagcgataacagaaccatcagtattaactttcaaccaaggaggggatggagccttccacaacacc |
295 |
Q |
| |
|
|||| || ||||| |||||||| |||||||| |||||||||| |||||||| ||||||||||| |||||||||| |
|
|
| T |
24271416 |
ccgcatgcccagcaataacagatccatcagtgttaactttcagccaaggagaggatggagcctcccacaacacc |
24271489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 24297020 - 24296852
Alignment:
| Q |
22 |
caaagaagggttggaaaaaatcaacaaagcactagatgagtcactttccaaccaaagattgcgccatccacgagaggacgcatgttccatggataaaata |
121 |
Q |
| |
|
|||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||| ||||||||| || |||||| || |||||||||||||| |
|
|
| T |
24297020 |
caaagaagagttggaaataatcagcaaagcactagatgagtcactttccaaccagatattacgccatccatgaaaggacgtgtgctccatggataaaatg |
24296921 |
T |
|
| Q |
122 |
atagcaagaacttcataatgatagaccgatgcctccccaacattacaacagaaagcaccaagaaaagag |
190 |
Q |
| |
|
||||||||||||||| |||| || |||||||||||||||| |||||||| ||||||| ||| |||||| |
|
|
| T |
24296920 |
atagcaagaacttcagaatggtaaaccgatgcctccccaatgttacaacataaagcactaaggaaagag |
24296852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 295
Target Start/End: Complemental strand, 24285695 - 24285630
Alignment:
| Q |
230 |
ccagcgataacagaaccatcagtattaactttcaaccaaggaggggatggagccttccacaacacc |
295 |
Q |
| |
|
||||| |||||| | | |||||| |||||||||| |||||||| | |||||||||||||||||||| |
|
|
| T |
24285695 |
ccagcaataacatatcaatcagtgttaactttcagccaaggagagaatggagccttccacaacacc |
24285630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 25971433 - 25971475
Alignment:
| Q |
35 |
gaaaaaatcaacaaagcactagatgagtcactttccaaccaaa |
77 |
Q |
| |
|
||||||||||| ||||||||||| ||||| ||||||||||||| |
|
|
| T |
25971433 |
gaaaaaatcaataaagcactagaggagtcgctttccaaccaaa |
25971475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 134; Significance: 9e-70; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 33 - 302
Target Start/End: Complemental strand, 14865164 - 14864895
Alignment:
| Q |
33 |
tggaaaaaatcaacaaagcactagatgagtcactttccaaccaaagattgcgccatccacgagaggacgcatgttccatggataaaataatagcaagaac |
132 |
Q |
| |
|
||||||| |||| | |||||||||||||||||||||||||||| | | ||||| ||| |||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
14865164 |
tggaaaatatcagctaagcactagatgagtcactttccaaccagatgtgtcgccacccatgagaggacgcgtgctccatggataaaataatagcaagaac |
14865065 |
T |
|
| Q |
133 |
ttcataatgatagaccgatgcctccccaacattacaacagaaagcaccaagaaaagagcccctagagtcacgaaagaggccaccacaagccgcctggcca |
232 |
Q |
| |
|
||| |||| || ||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||| |||||||| || ||||||||||| |||||| |
|
|
| T |
14865064 |
ttccgaatggtaaaccgaggcctccacaatgttacaacagaaagcaccaaggaaagagcccctagagtcgcgaaagagaccgccacaagccgcgtggcca |
14864965 |
T |
|
| Q |
233 |
gcgataacagaaccatcagtattaactttcaaccaaggaggggatggagccttccacaacaccgggatga |
302 |
Q |
| |
|
|| | ||| | |||||||| |||||||||| |||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
14864964 |
gcaaggacatagccatcagtgttaactttcatccaaggagaggatggagccttccaaaacaccgggatga |
14864895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 207
Target Start/End: Complemental strand, 19088531 - 19088359
Alignment:
| Q |
37 |
aaaaatcaacaaagcactagatgagtcactttccaaccaaagattgcgccatccacgagaggacgcatgttccatggataaaataatagcaagaacttca |
136 |
Q |
| |
|
|||||||| ||| ||||||| |||||||||||||||||| | ||| ||||| ||| |||| | ||||| |||||||| ||| || |||| ||||||| | |
|
|
| T |
19088531 |
aaaaatcatcaatgcactagttgagtcactttccaaccagatattccgccacccatgagaagccgcatattccatggctaagatgatagtgagaacttta |
19088432 |
T |
|
| Q |
137 |
taatgatagaccgatgcctccccaacattacaac--agaaagcaccaagaaaagagcccctagagtcacgaaa |
207 |
Q |
| |
|
|||| | || || || | |||| ||||||| |||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
19088431 |
gaatggaaaactgaagcaacaccaatgttacaacagagaaagcaccaagaaaagagccccgagagtcccgaaa |
19088359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 22523223 - 22523265
Alignment:
| Q |
35 |
gaaaaaatcaacaaagcactagatgagtcactttccaaccaaa |
77 |
Q |
| |
|
||||||||||| ||||||||||| ||||| ||||||||||||| |
|
|
| T |
22523223 |
gaaaaaatcaataaagcactagaggagtcgctttccaaccaaa |
22523265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 8273959 - 8273907
Alignment:
| Q |
243 |
aaccatcagtattaactttcaaccaaggaggggatggagccttccacaacacc |
295 |
Q |
| |
|
||||||||||||| |||||||| ||||||| ||| || || |||||||||||| |
|
|
| T |
8273959 |
aaccatcagtattcactttcaagcaaggagaggacggggctttccacaacacc |
8273907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0911 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0911
Description:
Target: scaffold0911; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 50 - 302
Target Start/End: Complemental strand, 347 - 95
Alignment:
| Q |
50 |
gcactagatgagtcactttccaaccaaagattgcgccatccacgagaggacgcatgttccatggataaaataatagcaagaacttcataatgatagaccg |
149 |
Q |
| |
|
|||||||||||||||||||||||||| | | ||||| ||| |||||||||| || ||||||||||||||||||||||||||||| |||| || |||| |
|
|
| T |
347 |
gcactagatgagtcactttccaaccagatgtgtcgccacccatgagaggacgcgtgctccatggataaaataatagcaagaacttccgaatggtaaaccg |
248 |
T |
|
| Q |
150 |
atgcctccccaacattacaacagaaagcaccaagaaaagagcccctagagtcacgaaagaggccaccacaagccgcctggccagcgataacagaaccatc |
249 |
Q |
| |
|
| |||||||||| |||||| |||||||| |||| ||||||||| ||||||| |||||||| || |||||||||| |||||| | || ||||| ||||| |
|
|
| T |
247 |
aggcctccccaatgttacaagagaaagcaacaaggaaagagcccgtagagtctcgaaagagaccgccacaagccgtgtggccaacaatgacagagccatc |
148 |
T |
|
| Q |
250 |
agtattaactttcaaccaaggaggggatggagccttccacaacaccgggatga |
302 |
Q |
| |
|
||| |||||||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
147 |
agtgttaactttcatccaaggagaggatggagccttccacaacaccgggatga |
95 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0437 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0437
Description:
Target: scaffold0437; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 10993 - 10798
Alignment:
| Q |
107 |
tccatggataaaataatagcaagaacttcataatgatagaccgatgcctccccaacattacaacagaaagcaccaagaaaagagcccctagagtcacgaa |
206 |
Q |
| |
|
||||||| ||||| || |||||||||||| |||| | ||||| ||||| |||| ||| ||||| ||||||||||||||| ||||| |||| | |||| |
|
|
| T |
10993 |
tccatggccaaaattatcgcaagaacttcagaatggaaaaccgaagcctcaccaatattgcaacaaaaagcaccaagaaaaacgccccgagagcctcgaa |
10894 |
T |
|
| Q |
207 |
agaggccaccacaagccgcctggccagcgataacagaaccatcagtattaactttcaaccaaggaggggatggagccttccacaacaccgggatga |
302 |
Q |
| |
|
| || || ||||||||||| ||| | || || |||||||| || |||||||||| |||||||| ||| || ||||||||||||||||| |||| |
|
|
| T |
10893 |
acagccccccacaagccgcaaaaccatcaatcacggaaccatccgtgttaactttcacccaaggagaggaaggtgccttccacaacaccggaatga |
10798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 107 - 294
Target Start/End: Complemental strand, 1873 - 1688
Alignment:
| Q |
107 |
tccatggataaaataatagcaagaacttcataatgatagaccgatgcctccccaacattacaacagaaagcaccaagaaaagagcccctagagtcacgaa |
206 |
Q |
| |
|
||||||| ||||| || |||||||||||| |||| | ||||| ||||| |||| ||| ||||| |||| |||||||||| ||||| |||| | |||| |
|
|
| T |
1873 |
tccatggccaaaattatcgcaagaacttcagaatggaaaaccgaagcctcaccaatattgcaacaaaaagtaccaagaaaaacgccccaagagcctcgaa |
1774 |
T |
|
| Q |
207 |
agaggccaccacaagccgcctggccagcgataacagaaccatcagtattaactttcaaccaaggaggggatggagccttccacaacac |
294 |
Q |
| |
|
| || || ||||||||||| | ||| | || || ||||||||||| ||||||| | |||||||| ||| || |||||||||||||| |
|
|
| T |
1773 |
acagccccccacaagccgcaagaccatcaatcacggaaccatcagtgttaactt--acccaaggagaggaaggggccttccacaacac |
1688 |
T |
|
Back To:
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Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 107 - 294
Target Start/End: Original strand, 21712037 - 21712222
Alignment:
| Q |
107 |
tccatggataaaataatagcaagaacttcataatgatagaccgatgcctccccaacattacaacagaaagcaccaagaaaagagcccctagagtcacgaa |
206 |
Q |
| |
|
||||||| ||||| || |||||||||||| |||| | ||||| ||||| |||| ||| ||||| |||| |||||||||| ||||| |||| | |||| |
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|
| T |
21712037 |
tccatggccaaaattatcgcaagaacttcagaatggaaaaccgaagcctcaccaatattgcaacaaaaagtaccaagaaaaacgccccaagagcctcgaa |
21712136 |
T |
|
| Q |
207 |
agaggccaccacaagccgcctggccagcgataacagaaccatcagtattaactttcaaccaaggaggggatggagccttccacaacac |
294 |
Q |
| |
|
| || || ||||||||||| | ||| | || || ||||||||||| ||||||| | |||||||| ||| || |||||||||||||| |
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|
| T |
21712137 |
acagccccccacaagccgcaagaccatcaatcacggaaccatcagtgttaactt--acccaaggagaggaaggggccttccacaacac |
21712222 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 4120168 - 4120116
Alignment:
| Q |
23 |
aaagaagggttggaaaaaatcaacaaagcactagatgagtcactttccaacca |
75 |
Q |
| |
|
|||||||| || |||||||||| ||| ||||||| |||||||||||||||||| |
|
|
| T |
4120168 |
aaagaaggattagaaaaaatcagcaatgcactagttgagtcactttccaacca |
4120116 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 295
Target Start/End: Original strand, 21878500 - 21878595
Alignment:
| Q |
200 |
tcacgaaagaggccaccacaagccgcctggccagcgataacagaaccatcagtattaactttcaaccaaggaggggatggagccttccacaacacc |
295 |
Q |
| |
|
|||||||| || || ||||| ||||| || ||| | |||||||||||||| ||||| || ||||||||||| | ||| ||||| ||||| |||||| |
|
|
| T |
21878500 |
tcacgaaacagccctccacaggccgcatgcccaccaataacagaaccatccgtatttaccttcaaccaaggcgaggaaggagctttccataacacc |
21878595 |
T |
|
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Target: chr7 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 20937234 - 20937276
Alignment:
| Q |
35 |
gaaaaaatcaacaaagcactagatgagtcactttccaaccaaa |
77 |
Q |
| |
|
||||||||||| ||||||||||| ||||| ||||||||||||| |
|
|
| T |
20937234 |
gaaaaaatcaataaagcactagaggagtcgctttccaaccaaa |
20937276 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 1538551 - 1538608
Alignment:
| Q |
245 |
ccatcagtattaactttcaaccaaggaggggatggagccttccacaacaccgggatga |
302 |
Q |
| |
|
|||||| |||| ||||||||||||||| ||| |||||||||||||| ||||| |||| |
|
|
| T |
1538551 |
ccatcaatattttctttcaaccaaggagaggagggagccttccacaataccggaatga |
1538608 |
T |
|
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