View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9795A_low_178 (Length: 270)
Name: NF9795A_low_178
Description: NF9795A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9795A_low_178 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 14 - 264
Target Start/End: Original strand, 36109747 - 36109997
Alignment:
| Q |
14 |
agaccattctcccccttttttgtagtttagaatttaagacctcaccttccatactttctggagataattatatcaatttgctaactaatccaagggcctg |
113 |
Q |
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| T |
36109747 |
agaccattctcccccttttttgtagtttagaatttaagacctcaccttccatactttctggaaataattatatcaatctggtaactagtccaagggcctg |
36109846 |
T |
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| Q |
114 |
gcttgtaaaatttcaaaggattacttacagctggtacaagtttttcttttatgtaccttggtggcattcattagcaatttagcatatactttacatcatc |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36109847 |
gcttgtaaaatttcaaaggattacttacagctggtacaagtttttcttttatctaccttggtggcattcattagcaatttagcatatactttacatcatc |
36109946 |
T |
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| Q |
214 |
ataagcatcattggactcttgtgatgagcttcatcttgtaactgaggtatc |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
36109947 |
ataagcatcattggactcttgtgatgagcttcatcttgcaactgaggtatc |
36109997 |
T |
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