View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9795A_low_200 (Length: 255)
Name: NF9795A_low_200
Description: NF9795A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9795A_low_200 |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 7 - 253
Target Start/End: Complemental strand, 51251 - 51005
Alignment:
| Q |
7 |
tttggtgttctaaaatggcacatacacccctttgttaagtaaaacacattgaccttcccttgattcgtattctttccttacatactttttctgtttctac |
106 |
Q |
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| T |
51251 |
tttggtgttctaaaatggcacatacacccctttgttaagtaaaacacattgaccttcccttgattcgtattctttccttacatactttttctgtttctac |
51152 |
T |
|
| Q |
107 |
ctatctccgactactcactatattaacctcatctaaataataactaactcctcttatgtctcattttgttacatttgcggaggtgttagttatcctcttt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51151 |
ctatctccgactactcactatattaacctcatctaaataataactaactcctcttatgtctcattttgttacatttgcggaggtgttagttatcctcttt |
51052 |
T |
|
| Q |
207 |
tctttcctagtgtatacactcttaagtactggtttacaatcaatatg |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51051 |
tctttcctagtgtatacactcttaagtactggtttacaatcaatatg |
51005 |
T |
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