View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9795A_low_208 (Length: 251)
Name: NF9795A_low_208
Description: NF9795A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9795A_low_208 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 16 - 251
Target Start/End: Complemental strand, 1124266 - 1124031
Alignment:
| Q |
16 |
tggacatcaaatgcaatggcagctacattatatgtgaaaatctgaaatacttaatgactttcataattttcaaccaaatcatataagtaaattcctgata |
115 |
Q |
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| T |
1124266 |
tggacatcaaatgcaatggcagctacattatatgtgaaaatctgaaatacttaatgactttcataattttcaaccaaatcatataagtaaattcctgata |
1124167 |
T |
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| Q |
116 |
tacaaccctggtgtagtctagcgtagaaaaacctagccggtggtcataaggaaaggtaattaataattataaacgcattaggaaaacaaaagtcacatgc |
215 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1124166 |
tacaaccctggtgtagtctagtgtagaaaaacctagccggtggtcataaggaaaggtaattaataattataaacgcattaggaaaacaaaagtcacatgc |
1124067 |
T |
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| Q |
216 |
acctggattccaagtattttatcattatttgccagc |
251 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
1124066 |
acctggattccaagtattttatcattatttgccagc |
1124031 |
T |
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