View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9795A_low_346 (Length: 231)
Name: NF9795A_low_346
Description: NF9795A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9795A_low_346 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 34884544 - 34884322
Alignment:
| Q |
9 |
ggtgttcagatactcctgtgacgaaattggggtggaggaggattgttttggatgaggcgcatacgattaagaatgttaatgcgggacagagtcaggctgt |
108 |
Q |
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| T |
34884544 |
ggtgttcagatactcctgtgaagaaattggggtggaggaggattgttttggatgaggcgcatacaattaagaatgttaatgcgggacagagtcaggctgt |
34884445 |
T |
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| Q |
109 |
tattgccttgaatgctaagaggagatgggctgttacggggacgcctattcagaatggttcttatgatttgttttctcttatggcttttttgcattttgag |
208 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34884444 |
tattgctttgaatgctaagaggagatgggctgttacggggacgcctattcagaatggttcttatgatttgttttctcttatggcttttttgcattttgag |
34884345 |
T |
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| Q |
209 |
ccgttttctattaagagttattg |
231 |
Q |
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| T |
34884344 |
ccgttttctattaagagttattg |
34884322 |
T |
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