View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9795A_low_435 (Length: 218)

Name: NF9795A_low_435
Description: NF9795A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9795A_low_435
NF9795A_low_435
[»] chr8 (68 HSPs)
chr8 (1-218)||(7677009-7677229)
chr8 (1-148)||(23230786-23230933)
chr8 (1-148)||(7883040-7883187)
chr8 (1-147)||(16928557-16928703)
chr8 (5-148)||(17693412-17693556)
chr8 (1-148)||(9637208-9637355)
chr8 (5-148)||(31013407-31013550)
chr8 (1-147)||(25190865-25191011)
chr8 (1-144)||(30568124-30568267)
chr8 (5-148)||(33214470-33214613)
chr8 (1-148)||(45445610-45445757)
chr8 (1-148)||(37971426-37971577)
chr8 (6-148)||(40211099-40211243)
chr8 (1-148)||(28086611-28086758)
chr8 (1-85)||(18890561-18890645)
chr8 (9-96)||(15344459-15344546)
chr8 (9-96)||(15433524-15433611)
chr8 (9-96)||(15524828-15524915)
chr8 (1-102)||(29617119-29617220)
chr8 (1-101)||(41896660-41896760)
chr8 (9-144)||(1236501-1236635)
chr8 (1-148)||(14915988-14916134)
chr8 (1-96)||(43833847-43833942)
chr8 (112-154)||(13570429-13570471)
chr8 (77-147)||(41684592-41684662)
chr8 (105-154)||(24842736-24842785)
chr8 (112-165)||(37613061-37613114)
chr8 (1-53)||(20553135-20553187)
chr8 (112-156)||(38545476-38545520)
chr8 (1-96)||(7198046-7198141)
chr8 (1-48)||(8867948-8867995)
chr8 (5-64)||(10377836-10377895)
chr8 (1-96)||(14585820-14585915)
chr8 (1-143)||(29939443-29939586)
chr8 (1-96)||(41060114-41060209)
chr8 (7-53)||(5046902-5046948)
chr8 (6-140)||(24186468-24186602)
chr8 (112-154)||(39067352-39067394)
chr8 (111-165)||(41362157-41362211)
chr8 (1-50)||(5333572-5333621)
chr8 (75-148)||(8412321-8412394)
chr8 (116-153)||(11967996-11968033)
chr8 (1-82)||(471029-471112)
chr8 (116-156)||(13575869-13575909)
chr8 (1-53)||(20559638-20559690)
chr8 (1-53)||(20571200-20571252)
chr8 (6-49)||(428989-429032)
chr8 (29-148)||(21237959-21238077)
chr8 (116-154)||(2234132-2234170)
chr8 (116-154)||(2968944-2968982)
chr8 (116-158)||(4757577-4757619)
chr8 (112-154)||(7281977-7282019)
chr8 (116-154)||(15286694-15286732)
chr8 (116-154)||(15467063-15467101)
chr8 (116-154)||(24790832-24790870)
chr8 (1-143)||(27498170-27498312)
chr8 (116-154)||(31202877-31202915)
chr8 (1-87)||(34493145-34493231)
chr8 (116-153)||(1809901-1809938)
chr8 (115-148)||(10377931-10377964)
chr8 (113-154)||(30026544-30026585)
chr8 (7-96)||(33347372-33347461)
chr8 (6-50)||(6394250-6394294)
chr8 (111-155)||(9799678-9799722)
chr8 (6-50)||(10254351-10254395)
chr8 (6-50)||(20227175-20227219)
chr8 (112-152)||(26673446-26673486)
chr8 (1-53)||(27110359-27110411)
[»] chr7 (63 HSPs)
chr7 (5-148)||(40993304-40993447)
chr7 (1-148)||(9977011-9977158)
chr7 (1-148)||(8001347-8001494)
chr7 (1-154)||(37837253-37837406)
chr7 (1-154)||(45349594-45349747)
chr7 (1-148)||(28044557-28044704)
chr7 (1-148)||(48061565-48061712)
chr7 (1-142)||(39171397-39171538)
chr7 (1-148)||(48316620-48316760)
chr7 (1-148)||(12141108-12141256)
chr7 (5-144)||(34899412-34899551)
chr7 (6-148)||(28407719-28407861)
chr7 (1-138)||(47590454-47590591)
chr7 (1-137)||(42978753-42978889)
chr7 (1-148)||(39328595-39328738)
chr7 (5-53)||(13796825-13796873)
chr7 (1-148)||(19404560-19404705)
chr7 (116-156)||(24319875-24319915)
chr7 (1-88)||(9449998-9450085)
chr7 (5-88)||(19297017-19297100)
chr7 (1-96)||(41553288-41553382)
chr7 (6-52)||(46244149-46244195)
chr7 (27-96)||(3222957-3223026)
chr7 (116-165)||(11833447-11833496)
chr7 (111-156)||(15670462-15670507)
chr7 (9-54)||(17773420-17773465)
chr7 (1-54)||(24069289-24069342)
chr7 (1-156)||(25286980-25287134)
chr7 (113-153)||(10094866-10094906)
chr7 (1-101)||(28476369-28476469)
chr7 (6-138)||(13592304-13592433)
chr7 (1-96)||(35133090-35133185)
chr7 (1-96)||(35664988-35665083)
chr7 (116-154)||(2623021-2623059)
chr7 (116-154)||(4621034-4621072)
chr7 (126-156)||(10624221-10624251)
chr7 (116-154)||(21991091-21991129)
chr7 (112-154)||(23808751-23808793)
chr7 (116-154)||(27535856-27535894)
chr7 (112-154)||(32741168-32741210)
chr7 (121-171)||(33095773-33095823)
chr7 (112-154)||(35362776-35362818)
chr7 (116-154)||(37375710-37375748)
chr7 (116-154)||(38277226-38277264)
chr7 (112-154)||(43847398-43847440)
chr7 (116-154)||(44482532-44482570)
chr7 (116-154)||(48643480-48643518)
chr7 (116-153)||(8180230-8180267)
chr7 (111-156)||(15123669-15123714)
chr7 (113-154)||(21552123-21552164)
chr7 (116-165)||(30992481-30992530)
chr7 (117-154)||(39707698-39707735)
chr7 (1-53)||(3398333-3398385)
chr7 (118-154)||(6667826-6667862)
chr7 (1-53)||(24770389-24770441)
chr7 (1-53)||(29617595-29617647)
chr7 (112-156)||(37400002-37400046)
chr7 (126-154)||(37714903-37714931)
chr7 (1-129)||(38798924-38799052)
chr7 (6-50)||(44311688-44311732)
chr7 (108-148)||(46821542-46821582)
chr7 (1-53)||(46822639-46822690)
chr7 (6-54)||(49148010-49148058)
[»] chr5 (51 HSPs)
chr5 (5-148)||(26825574-26825717)
chr5 (1-148)||(24229585-24229732)
chr5 (5-148)||(13007373-13007516)
chr5 (1-148)||(14726262-14726409)
chr5 (5-148)||(34945537-34945680)
chr5 (5-148)||(9113526-9113669)
chr5 (5-148)||(25980301-25980444)
chr5 (1-148)||(38597937-38598084)
chr5 (1-148)||(8096300-8096446)
chr5 (1-148)||(14082197-14082344)
chr5 (1-148)||(38007498-38007644)
chr5 (5-148)||(6011939-6012082)
chr5 (1-148)||(10722901-10723048)
chr5 (1-148)||(26877910-26878056)
chr5 (1-144)||(11976740-11976883)
chr5 (1-144)||(35850939-35851080)
chr5 (7-54)||(11192525-11192572)
chr5 (6-54)||(8514547-8514595)
chr5 (1-96)||(14211367-14211462)
chr5 (1-96)||(39567410-39567505)
chr5 (1-148)||(1409638-1409787)
chr5 (116-154)||(7151225-7151263)
chr5 (6-144)||(13422078-13422215)
chr5 (1-79)||(41630642-41630720)
chr5 (1-42)||(7930317-7930358)
chr5 (1-50)||(11867789-11867838)
chr5 (112-156)||(6281469-6281513)
chr5 (16-96)||(24874684-24874764)
chr5 (1-53)||(31391649-31391701)
chr5 (112-156)||(42396162-42396206)
chr5 (1-96)||(2979159-2979254)
chr5 (6-148)||(6217043-6217185)
chr5 (1-96)||(28540759-28540854)
chr5 (111-154)||(42505067-42505110)
chr5 (105-147)||(8514445-8514487)
chr5 (116-154)||(9196685-9196723)
chr5 (116-154)||(17331757-17331795)
chr5 (116-154)||(23881770-23881808)
chr5 (116-154)||(26294039-26294077)
chr5 (112-154)||(26294728-26294770)
chr5 (116-154)||(34431493-34431531)
chr5 (7-53)||(38961573-38961619)
chr5 (116-154)||(39531062-39531100)
chr5 (116-153)||(3740761-3740798)
chr5 (116-153)||(6886847-6886884)
chr5 (1-94)||(19121052-19121145)
chr5 (116-168)||(4726657-4726709)
chr5 (114-154)||(6639408-6639448)
chr5 (131-167)||(13677529-13677565)
chr5 (110-154)||(22978702-22978746)
chr5 (6-50)||(35920895-35920939)
[»] chr3 (87 HSPs)
chr3 (5-148)||(10229620-10229763)
chr3 (5-148)||(9998611-9998754)
chr3 (5-148)||(10108380-10108523)
chr3 (5-148)||(10233214-10233357)
chr3 (1-148)||(45568246-45568393)
chr3 (5-148)||(9797335-9797478)
chr3 (1-148)||(21313176-21313323)
chr3 (1-144)||(21533614-21533757)
chr3 (1-148)||(40487465-40487612)
chr3 (1-148)||(43017028-43017175)
chr3 (5-144)||(48650539-48650678)
chr3 (5-148)||(52922918-52923061)
chr3 (5-148)||(6954497-6954640)
chr3 (1-146)||(33580020-33580165)
chr3 (6-154)||(54149136-54149284)
chr3 (1-148)||(12050449-12050596)
chr3 (1-148)||(46304322-46304468)
chr3 (5-148)||(21431757-21431902)
chr3 (5-142)||(44959780-44959917)
chr3 (1-93)||(42460889-42460981)
chr3 (1-148)||(38545939-38546086)
chr3 (5-148)||(40556846-40556989)
chr3 (1-148)||(47896292-47896438)
chr3 (5-153)||(7448710-7448858)
chr3 (5-153)||(7456852-7457000)
chr3 (5-148)||(4711626-4711769)
chr3 (1-148)||(43488392-43488538)
chr3 (1-144)||(47041853-47041996)
chr3 (1-148)||(36461238-36461379)
chr3 (6-96)||(41818360-41818450)
chr3 (1-96)||(21289667-21289762)
chr3 (1-148)||(37040909-37041055)
chr3 (10-148)||(35175553-35175690)
chr3 (116-165)||(3457351-3457400)
chr3 (34-166)||(31271614-31271747)
chr3 (75-148)||(36910567-36910640)
chr3 (1-53)||(19339315-19339367)
chr3 (1-53)||(23799806-23799858)
chr3 (1-53)||(26739253-26739305)
chr3 (5-129)||(32701635-32701759)
chr3 (8-96)||(38142672-38142760)
chr3 (1-53)||(38860008-38860060)
chr3 (1-96)||(27706079-27706174)
chr3 (9-96)||(53807711-53807798)
chr3 (6-136)||(26275632-26275762)
chr3 (116-154)||(53155092-53155130)
chr3 (116-165)||(2192507-2192556)
chr3 (1-86)||(7546755-7546840)
chr3 (113-154)||(44984527-44984568)
chr3 (116-165)||(45664629-45664678)
chr3 (117-154)||(46732414-46732451)
chr3 (116-165)||(55090350-55090399)
chr3 (1-53)||(9173888-9173940)
chr3 (1-53)||(20987651-20987703)
chr3 (116-156)||(36691459-36691499)
chr3 (121-165)||(37452121-37452165)
chr3 (116-156)||(51060084-51060124)
chr3 (9-53)||(52115917-52115961)
chr3 (1-53)||(53099930-53099981)
chr3 (9-96)||(628776-628863)
chr3 (1-96)||(8914852-8914947)
chr3 (111-154)||(14585886-14585929)
chr3 (1-52)||(19619853-19619904)
chr3 (111-154)||(19645614-19645657)
chr3 (6-144)||(20464770-20464913)
chr3 (112-167)||(45047922-45047977)
chr3 (111-154)||(50981128-50981171)
chr3 (111-154)||(51084262-51084305)
chr3 (1-96)||(51303496-51303591)
chr3 (116-154)||(11819513-11819551)
chr3 (116-154)||(13701664-13701702)
chr3 (116-154)||(24483358-24483396)
chr3 (119-165)||(34960580-34960626)
chr3 (112-154)||(40012934-40012976)
chr3 (126-172)||(42106562-42106608)
chr3 (116-154)||(48401521-48401559)
chr3 (116-154)||(49627766-49627804)
chr3 (116-154)||(54706394-54706432)
chr3 (116-154)||(55455291-55455329)
chr3 (116-153)||(1074557-1074594)
chr3 (6-42)||(26716014-26716050)
chr3 (1-53)||(29922197-29922249)
chr3 (1-53)||(29971350-29971402)
chr3 (126-154)||(31550349-31550377)
chr3 (116-172)||(33637823-33637879)
chr3 (1-53)||(44805169-44805221)
chr3 (1-53)||(51923867-51923919)
[»] chr4 (72 HSPs)
chr4 (1-148)||(17949124-17949272)
chr4 (1-148)||(17952976-17953124)
chr4 (1-148)||(56040447-56040594)
chr4 (1-148)||(21686043-21686190)
chr4 (5-148)||(43510361-43510504)
chr4 (5-148)||(19853313-19853456)
chr4 (5-148)||(32766679-32766822)
chr4 (5-154)||(48257427-48257576)
chr4 (1-148)||(2520940-2521087)
chr4 (1-147)||(24098871-24099015)
chr4 (1-148)||(10496496-10496644)
chr4 (1-144)||(13634276-13634419)
chr4 (57-148)||(4142565-4142656)
chr4 (1-141)||(10258709-10258844)
chr4 (5-148)||(22611348-22611498)
chr4 (8-88)||(22806704-22806784)
chr4 (1-148)||(26633472-26633619)
chr4 (1-96)||(43853604-43853699)
chr4 (5-148)||(53811193-53811326)
chr4 (1-148)||(35348468-35348617)
chr4 (1-141)||(29960757-29960897)
chr4 (1-148)||(21662598-21662745)
chr4 (1-148)||(21671362-21671509)
chr4 (1-96)||(36161872-36161967)
chr4 (4-88)||(9178517-9178601)
chr4 (1-53)||(37465643-37465695)
chr4 (1-96)||(9714071-9714166)
chr4 (1-143)||(53444279-53444422)
chr4 (9-143)||(47320219-47320352)
chr4 (1-52)||(29120276-29120327)
chr4 (1-96)||(52933802-52933897)
chr4 (116-154)||(477675-477713)
chr4 (5-95)||(11299864-11299954)
chr4 (116-154)||(18502496-18502534)
chr4 (112-154)||(19745815-19745857)
chr4 (112-154)||(19793949-19793991)
chr4 (116-154)||(20887411-20887449)
chr4 (113-151)||(39797380-39797418)
chr4 (1-51)||(45418673-45418723)
chr4 (116-165)||(7060743-7060792)
chr4 (9-53)||(6155119-6155163)
chr4 (1-53)||(22305517-22305569)
chr4 (111-165)||(43095904-43095959)
chr4 (1-148)||(52978905-52979052)
chr4 (116-154)||(7084371-7084409)
chr4 (116-154)||(8517113-8517151)
chr4 (6-88)||(12493459-12493541)
chr4 (116-154)||(13965972-13966010)
chr4 (116-154)||(14346839-14346877)
chr4 (116-154)||(24826068-24826106)
chr4 (6-124)||(26090735-26090853)
chr4 (116-154)||(30416295-30416333)
chr4 (112-154)||(37431581-37431623)
chr4 (116-154)||(38435006-38435044)
chr4 (111-153)||(39838018-39838060)
chr4 (116-154)||(42197982-42198020)
chr4 (116-154)||(43244035-43244073)
chr4 (6-148)||(44596826-44596967)
chr4 (116-154)||(45350724-45350762)
chr4 (116-154)||(45360203-45360241)
chr4 (116-154)||(46268094-46268132)
chr4 (110-155)||(46990908-46990953)
chr4 (1-141)||(54022021-54022165)
chr4 (117-154)||(55600200-55600237)
chr4 (6-86)||(7008852-7008932)
chr4 (6-94)||(9048830-9048918)
chr4 (111-171)||(11209950-11210010)
chr4 (1-85)||(18935943-18936027)
chr4 (116-152)||(31522375-31522411)
chr4 (1-53)||(33921215-33921267)
chr4 (117-169)||(36123996-36124048)
chr4 (1-53)||(36194869-36194921)
[»] chr2 (79 HSPs)
chr2 (5-148)||(38445321-38445464)
chr2 (1-148)||(5427671-5427818)
chr2 (5-148)||(4778908-4779051)
chr2 (1-148)||(31788607-31788754)
chr2 (1-148)||(4903947-4904094)
chr2 (1-148)||(18763619-18763766)
chr2 (1-148)||(36692025-36692172)
chr2 (1-154)||(11985029-11985182)
chr2 (1-154)||(1421827-1421979)
chr2 (1-144)||(4041400-4041543)
chr2 (5-148)||(7646633-7646776)
chr2 (1-148)||(25508870-25509017)
chr2 (5-148)||(33585537-33585680)
chr2 (1-148)||(33923856-33924003)
chr2 (14-144)||(29173523-29173653)
chr2 (1-148)||(7677675-7677822)
chr2 (17-148)||(35220495-35220626)
chr2 (1-95)||(12554036-12554130)
chr2 (6-148)||(37876408-37876550)
chr2 (5-148)||(4100491-4100628)
chr2 (18-148)||(19062150-19062279)
chr2 (6-148)||(36942924-36943065)
chr2 (8-148)||(9169059-9169200)
chr2 (1-144)||(1415708-1415851)
chr2 (1-96)||(6358735-6358830)
chr2 (6-154)||(29279361-29279514)
chr2 (1-96)||(10237070-10237165)
chr2 (1-148)||(12677253-12677399)
chr2 (77-148)||(31193138-31193209)
chr2 (8-96)||(33760047-33760135)
chr2 (116-171)||(13878646-13878701)
chr2 (116-171)||(14018771-14018826)
chr2 (1-96)||(14955680-14955775)
chr2 (1-144)||(30399835-30399978)
chr2 (9-96)||(32448470-32448557)
chr2 (112-171)||(36868433-36868492)
chr2 (1-148)||(37994435-37994581)
chr2 (1-96)||(43396973-43397067)
chr2 (110-148)||(459060-459098)
chr2 (10-96)||(3309105-3309191)
chr2 (6-96)||(28533808-28533898)
chr2 (111-172)||(11550316-11550377)
chr2 (1-54)||(41694772-41694825)
chr2 (9-156)||(17248941-17249088)
chr2 (116-168)||(17767210-17767262)
chr2 (7-103)||(28871635-28871731)
chr2 (111-167)||(43696292-43696348)
chr2 (6-53)||(10548343-10548390)
chr2 (6-53)||(10929821-10929868)
chr2 (116-151)||(11798195-11798230)
chr2 (6-101)||(16376095-16376190)
chr2 (5-96)||(27097261-27097352)
chr2 (6-53)||(32190820-32190867)
chr2 (116-154)||(3527415-3527453)
chr2 (112-154)||(4603970-4604012)
chr2 (116-154)||(7639997-7640035)
chr2 (107-153)||(8064457-8064503)
chr2 (116-154)||(9689639-9689677)
chr2 (112-154)||(9978332-9978374)
chr2 (116-154)||(11942797-11942835)
chr2 (116-154)||(13548573-13548611)
chr2 (116-154)||(16136507-16136545)
chr2 (7-53)||(17151581-17151627)
chr2 (10-96)||(18107604-18107690)
chr2 (116-154)||(20560787-20560825)
chr2 (116-154)||(25068270-25068308)
chr2 (116-154)||(29543222-29543260)
chr2 (111-153)||(31908472-31908514)
chr2 (114-156)||(32711879-32711921)
chr2 (116-154)||(33012477-33012515)
chr2 (10-48)||(33140587-33140625)
chr2 (116-154)||(35333934-35333972)
chr2 (110-144)||(43711790-43711824)
chr2 (8-53)||(18056358-18056403)
chr2 (116-153)||(44942715-44942752)
chr2 (116-156)||(12705115-12705155)
chr2 (1-101)||(19028763-19028863)
chr2 (1-33)||(31210524-31210556)
chr2 (116-156)||(34962647-34962687)
[»] chr1 (65 HSPs)
chr1 (1-156)||(31984305-31984459)
chr1 (4-148)||(35484192-35484336)
chr1 (5-148)||(11462283-11462426)
chr1 (1-148)||(4413258-4413405)
chr1 (5-148)||(21947419-21947562)
chr1 (4-147)||(7337465-7337608)
chr1 (1-144)||(14872783-14872926)
chr1 (1-148)||(34878079-34878226)
chr1 (4-148)||(49504396-49504540)
chr1 (1-144)||(10776266-10776409)
chr1 (1-148)||(16989515-16989662)
chr1 (6-148)||(51373659-51373801)
chr1 (1-154)||(29738459-29738612)
chr1 (1-148)||(21687522-21687669)
chr1 (5-148)||(32395146-32395288)
chr1 (1-148)||(45415702-45415849)
chr1 (1-157)||(13144605-13144760)
chr1 (9-144)||(24583102-24583236)
chr1 (9-144)||(24583298-24583432)
chr1 (1-144)||(44915783-44915926)
chr1 (35-148)||(26535514-26535627)
chr1 (1-53)||(14489416-14489468)
chr1 (5-88)||(5983984-5984067)
chr1 (1-88)||(7836657-7836744)
chr1 (1-96)||(34412945-34413040)
chr1 (1-143)||(27579934-27580076)
chr1 (4-148)||(31919136-31919285)
chr1 (1-53)||(3228413-3228465)
chr1 (9-53)||(46399122-46399166)
chr1 (6-121)||(15431494-15431609)
chr1 (9-96)||(44543424-44543511)
chr1 (1-95)||(16161972-16162066)
chr1 (1-94)||(9341870-9341963)
chr1 (79-148)||(23289193-23289262)
chr1 (76-148)||(940457-940529)
chr1 (112-156)||(12147714-12147758)
chr1 (116-156)||(25032755-25032795)
chr1 (116-168)||(34659295-34659347)
chr1 (6-50)||(49648774-49648818)
chr1 (119-154)||(1141110-1141145)
chr1 (116-155)||(33703177-33703216)
chr1 (1-96)||(36775563-36775658)
chr1 (105-148)||(36894209-36894252)
chr1 (1-148)||(39888326-39888473)
chr1 (1-96)||(48750329-48750424)
chr1 (116-154)||(4882031-4882069)
chr1 (116-154)||(12872035-12872073)
chr1 (116-154)||(13152856-13152894)
chr1 (116-154)||(17348004-17348042)
chr1 (116-154)||(29205697-29205735)
chr1 (11-53)||(30712197-30712239)
chr1 (116-154)||(44517577-44517615)
chr1 (116-154)||(51418413-51418451)
chr1 (119-156)||(3233203-3233240)
chr1 (111-148)||(5984070-5984107)
chr1 (116-153)||(8758070-8758107)
chr1 (4-53)||(19596356-19596405)
chr1 (6-43)||(28053623-28053660)
chr1 (7-96)||(31317886-31317975)
chr1 (113-149)||(171531-171567)
chr1 (46-142)||(1742476-1742572)
chr1 (60-148)||(8211108-8211196)
chr1 (9-53)||(19061061-19061105)
chr1 (116-144)||(45659422-45659450)
chr1 (116-156)||(49652243-49652283)
[»] chr6 (52 HSPs)
chr6 (5-148)||(67802-67945)
chr6 (1-148)||(12170610-12170757)
chr6 (5-148)||(9341452-9341595)
chr6 (5-144)||(606350-606489)
chr6 (1-148)||(3913375-3913522)
chr6 (5-148)||(33052969-33053112)
chr6 (5-143)||(23128764-23128902)
chr6 (1-148)||(32327021-32327165)
chr6 (13-146)||(21426489-21426622)
chr6 (1-165)||(30894741-30894905)
chr6 (1-145)||(29255250-29255394)
chr6 (5-148)||(14174872-14175015)
chr6 (5-148)||(14179408-14179551)
chr6 (5-148)||(34018706-34018849)
chr6 (1-148)||(7515004-7515150)
chr6 (1-144)||(34185499-34185641)
chr6 (1-96)||(28981319-28981414)
chr6 (5-144)||(29319682-29319822)
chr6 (6-153)||(30608311-30608458)
chr6 (1-103)||(679251-679352)
chr6 (1-103)||(9380165-9380267)
chr6 (6-148)||(30493679-30493821)
chr6 (6-154)||(7975983-7976130)
chr6 (1-53)||(14846117-14846169)
chr6 (1-96)||(546173-546268)
chr6 (1-96)||(8102868-8102963)
chr6 (1-96)||(30776805-30776900)
chr6 (7-53)||(20225999-20226045)
chr6 (7-53)||(22119983-22120029)
chr6 (116-154)||(31705594-31705632)
chr6 (116-152)||(4921564-4921600)
chr6 (111-170)||(31984394-31984453)
chr6 (13-148)||(32060030-32060165)
chr6 (116-154)||(2304492-2304530)
chr6 (116-154)||(4085105-4085143)
chr6 (116-154)||(4660857-4660895)
chr6 (116-154)||(5146355-5146393)
chr6 (116-154)||(12653972-12654010)
chr6 (116-154)||(15589779-15589817)
chr6 (116-154)||(19402506-19402544)
chr6 (116-154)||(23654678-23654716)
chr6 (116-154)||(30813486-30813524)
chr6 (6-148)||(31296967-31297108)
chr6 (116-154)||(31804622-31804660)
chr6 (9-43)||(35086247-35086281)
chr6 (1-148)||(127811-127954)
chr6 (1-50)||(528249-528298)
chr6 (7-96)||(13546554-13546643)
chr6 (1-82)||(14801969-14802050)
chr6 (1-53)||(1523550-1523602)
chr6 (6-50)||(31852092-31852136)
chr6 (6-94)||(32802693-32802781)
[»] scaffold0884 (1 HSPs)
scaffold0884 (1-144)||(1778-1921)
[»] scaffold0050 (1 HSPs)
scaffold0050 (5-148)||(65843-65986)
[»] scaffold0136 (2 HSPs)
scaffold0136 (4-148)||(9843-9987)
scaffold0136 (6-43)||(34668-34705)
[»] scaffold0026 (1 HSPs)
scaffold0026 (5-144)||(71675-71814)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-148)||(15633-15780)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-134)||(32562-32695)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-148)||(31075-31222)
[»] scaffold0088 (1 HSPs)
scaffold0088 (5-96)||(50921-51012)
[»] scaffold0219 (1 HSPs)
scaffold0219 (7-141)||(14679-14813)
[»] scaffold0445 (1 HSPs)
scaffold0445 (1-129)||(1485-1613)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-144)||(71105-71248)
[»] scaffold0042 (1 HSPs)
scaffold0042 (6-88)||(92357-92439)
[»] scaffold0039 (1 HSPs)
scaffold0039 (6-94)||(93253-93341)
[»] scaffold0603 (1 HSPs)
scaffold0603 (7-154)||(7862-8021)
[»] scaffold0064 (1 HSPs)
scaffold0064 (6-94)||(18938-19025)
[»] scaffold0056 (1 HSPs)
scaffold0056 (116-168)||(74593-74645)
[»] scaffold0536 (1 HSPs)
scaffold0536 (116-154)||(3324-3362)
[»] scaffold0157 (1 HSPs)
scaffold0157 (6-88)||(26936-27018)
[»] scaffold0155 (1 HSPs)
scaffold0155 (116-154)||(35504-35542)
[»] scaffold0090 (1 HSPs)
scaffold0090 (112-154)||(11222-11264)
[»] scaffold0888 (1 HSPs)
scaffold0888 (1-94)||(1533-1626)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-53)||(36966-37018)
[»] scaffold0007 (1 HSPs)
scaffold0007 (111-155)||(201730-201774)


Alignment Details
Target: chr8 (Bit Score: 106; Significance: 3e-53; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 7677229 - 7677009
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||| |||| |||||||| |||||| |||||| | |    
T  7677229 ttaggttttatcatattatttgtaagcattttgccgttgtatgttattaacttgggtgctgtgactttgttcacagattcactctttacgtttttagcga 7677130  T
Q  101 tgtatg--tatatgatatactctatcgatttaaatgaatgaatatcg-tttatttttatgagaaaaaatatatatttcgaacgcatttagtgtcgtgact 197  Q
    ||| ||  |||||||| |||| ||||||||||||||||||||||| | ||||||||| ||| |||||||| || |||   |||||| |||| ||||||||    
T  7677129 tgtttgtatatatgatgtactatatcgatttaaatgaatgaatatggttttatttttgtgaaaaaaaataaatctttgtgacgcatatagtatcgtgact 7677030  T
Q  198 ccgtcaaaaacaaccacgtga 218  Q
    |||| ||||||||||||||||    
T  7677029 ccgtgaaaaacaaccacgtga 7677009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 23230786 - 23230933
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| |||  ||||||||| |||||| ||||| | |    
T  23230786 ttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccatttacacttttagcga 23230885  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  23230886 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 23230933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 7883187 - 7883040
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  |||||||  |||||||||  ||||||||| ||| |||  ||||||||||||||| |||||| | |    
T  7883187 ttaggttttatcatattatttgtaggcattttgccgttgtatcctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcga 7883088  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||| ||||| ||||||||||||||||||    
T  7883087 tgtttgtatctgatgtactctattgatttgaatgaatgaatatcgttt 7883040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 16928703 - 16928557
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||   ||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | |    
T  16928703 ttaggttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcga 16928604  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgtt 147  Q
    ||| ||||| |||| |||||||||||||| |||||||||||||||||    
T  16928603 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtt 16928557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 17693556 - 17693412
Alignment:
Q  5 gttttatcatattatttgtaagcatttt-gttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 103  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||   || ||||| |||  || ||||||||| ||||||||||||| | ||||    
T  17693556 gttttatcatattatttgtaggcatttttgttgttgtatgttattaacttggatgttgtgagtttggtcgtagattcactctttacatttttagcgatgt 17693457  T
Q  104 atgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
     ||||| |||| ||||||||| |||| | ||||||||||||||||    
T  17693456 ttgtatttgatgtactctatcaatttgagtgaatgaatatcgttt 17693412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 9637355 - 9637208
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||||||||||||||||||| || ||||||||| |||||||| |||||||||  ||| | ||| ||| ||| ||| |||||| ||||| ||||||   |    
T  9637355 ttaggttttatcatattatttttaggcattttgtcgttgtatgctattaacttgggtgttatgagtttgttcgtagtttcaccatttacgtttttagtga 9637256  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| ||||||||| |||||||||||||||||||||||    
T  9637255 tgtttgtatctgatgtactctatcaatttaaatgaatgaatatcgttt 9637208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 31013550 - 31013407
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| ||||||     
T  31013550 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcaatgtt 31013451  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||| ||||||| | ||||||||| ||||||||    
T  31013450 tgtatctgatgtactttatcgatatgaatgaatgactatcgttt 31013407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 25191011 - 25190865
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| |||||||  | || |||| |||||||||  ||||||||| ||| |||  ||||||||| |||||  ||||| |||    
T  25191011 ttaggttttatcatattatttgtaggcatttttctattttatgctattaacttgggtgctgtgagtttgttcgcagattcaccttttacgattttagcaa 25190912  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgtt 147  Q
    ||| ||||| |||| || ||||||||||| |||||||||||||||||    
T  25190911 tgtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgtt 25190865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 30568267 - 30568124
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||| ||||||||| ||||||||  ||| |||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | |    
T  30568267 ttaggttttatcatgttatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcga 30568168  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||| |||||||||| || |||||| |||| ||||||||||||||    
T  30568167 tgtttgtatatgatgtaatctatcaatttgaatgaatgaatatc 30568124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 33214613 - 33214470
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    ||||||||||||||||| ||  |||||||  ||| |||| |||||||||| ||||||| | ||| ||| |||||||||||||||| |||||| | | ||     
T  33214613 gttttatcatattatttttagacattttgccgttttatgctattaactttggtgctgttagtttgttcgtagattcaccctttacgtttttagcgacgtt 33214514  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    | ||| | || |||||||||||||| ||||||||||||||||||    
T  33214513 tatatctaatgtactctatcgatttgaatgaatgaatatcgttt 33214470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 45445757 - 45445610
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| ||||||||||||| |||| |||||||||   || ||||| ||| |||  | ||||||| ||||| |||||| | |    
T  45445757 ttagattttatcatattatttgtaggcattttgttgttttatgctattaacttggatgttgtgagtttgttcgcatattcaccttttacgtttttaacga 45445658  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| || || |||||||| ||||||||||||||||||    
T  45445657 tgtttgtatctgatgtaatccatcgatttgaatgaatgaatatcgttt 45445610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 37971426 - 37971577
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttat--- 97  Q
    ||||||||||||| |||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||||||||||        
T  37971426 ttaggttttatcacattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacatttttaatta 37971525  T
Q  98 -caatgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
     | |||| ||||| |||| |||||||| ||||| | ||||||||||||||||    
T  37971526 gcgatgtttgtatctgatgtactctattgatttgagtgaatgaatatcgttt 37971577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 40211243 - 40211099
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta--catttttatcaatgt 103  Q
    ||||||||||||||||||||||||| ||  |||||||| ||||||  |  ||| ||||| ||| ||| |||||||||||||||  | |||||| | ||||    
T  40211243 ttttatcatattatttgtaagcattatgccgttgtatgctattaatctgggtgatgtgagtttgttcgtagattcaccctttacgcgtttttagcgatgt 40211144  T
Q  104 atgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
     | ||| |||| |||||||||||||| ||||||||||||||||||    
T  40211143 ttatatctgatgtactctatcgatttgaatgaatgaatatcgttt 40211099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 28086758 - 28086611
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| ||||||||| |||||||| |||||||||  || || ||| ||| |||| | ||||| | | ||| |||||| | |    
T  28086758 ttagattttatcatattatttgtaggcattttgtcgttgtatgctattaacttaagtactatgagtttgttcacatattcatcatctacgtttttagcga 28086659  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||| |||| |||| ||| ||||||||||||||    
T  28086658 tgtttgtatctgatgtactatatcaatttgaataaatgaatatcgttt 28086611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18890645 - 18890561
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccct 85  Q
    |||| ||||||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||| ||| |||  |||||||||||    
T  18890645 ttagattttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccct 18890561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 15344459 - 15344546
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||| ||| |||  ||||||| ||||||| ||||||    
T  15344459 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgttttta 15344546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 15433524 - 15433611
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||| ||| |||  ||||||| ||||||| ||||||    
T  15433524 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgttttta 15433611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 15524828 - 15524915
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||| ||| |||  ||||||| ||||||| ||||||    
T  15524828 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgttttta 15524915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 29617220 - 29617119
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |||||||||   || ||||| ||| |||  |||||| |||||||  |||||| |||    
T  29617220 ttagattttatcatattatttgtaggcattttgttgttgtatgctattaacttaaatgttgtgagtttgttcgcagattcgccctttatgtttttaacaa 29617121  T
Q  101 tg 102  Q
    ||    
T  29617120 tg 29617119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41896660 - 41896760
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||| ||||||||||||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||| ||| |||||| |||    
T  41896660 ttagatttcatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacgtttttagcaa 41896759  T
Q  101 t 101  Q
    |    
T  41896760 t 41896760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 1236635 - 1236501
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgta 108  Q
    ||||||| ||||| || ||||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||| ||||||| |||||| |||| | ||      
T  1236635 tatcatactatttttaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttagcaatct-tgat 1236537  T
Q  109 tatgatatactctatcgatttaaatgaatgaatatc 144  Q
    | |||| || ||||||||||| ||||||||||||||    
T  1236536 tctgatgtattctatcgatttgaatgaatgaatatc 1236501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 14916134 - 14915988
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||||||||| |||||| ||||||||  |||||||| |||||||||  ||||  ||| |||||||  ||||||||| ||||| |||||| |||    
T  14916134 ttagattttatcatattgtttgtaggcattttgcagttgtatgctattaacttgagtgcattgagttttttcgcagattcaccatttacgtttttaacaa 14916035  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||  |||||  |  |||||| |||||||| ||| ||||||||||    
T  14916034 tgt-tgattatgaagtgttctatcaatttaaataaattaatatcgttt 14915988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 43833942 - 43833847
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||   ||||||||| ||||| ||||||    
T  43833942 ttagtttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccatttactttttta 43833847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 13570471 - 13570429
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  13570471 gatatactctatcaatttaaatgaatgaatatcgtttattttt 13570429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 41684592 - 41684662
Alignment:
Q  77 attcaccctttacatttttatcaatgtatgtatatgatatactctatcgatttaaatgaatgaatatcgtt 147  Q
    ||||||||||||| |||||| | |||| | ||| |||| ||||||||| ||||||||||||||||||||||    
T  41684592 attcaccctttacgtttttagcgatgtttatatctgatgtactctatcaatttaaatgaatgaatatcgtt 41684662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 24842785 - 24842736
Alignment:
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  24842785 tgtatttgatatactctatcgattttaatgaatgaatatcatttattttt 24842736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 37613061 - 37613114
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 165  Q
    ||||||||||||| |||| |||||||||||||||||||||||| | ||||||||    
T  37613061 gatatactctatcaatttgaatgaatgaatatcgtttatttttgtaagaaaaaa 37613114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20553187 - 20553135
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||||||||||||| ||||||||  |||||||| |||||||||    
T  20553187 ttaggttttatcatattatttgtaggcattttgccgttgtatgctattaactt 20553135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 38545520 - 38545476
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||    
T  38545520 gatatactctatcaatttgaatgaatgaatatcgtttatttttat 38545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7198141 - 7198046
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||||||||||||||||| | | ||||||| |||||||| |||||| ||  ||| ||||| ||| |||  ||||||||||||||| ||||||    
T  7198141 ttagattttatcatattatttgcaggaattttgtcgttgtatgctattaatttgggtgttgtgagtttattcgcagattcaccctttacgttttta 7198046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8867948 - 8867995
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttatt 48  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  8867948 ttagattttatcatattatttgtaggcattttgtcgttgtatgttatt 8867995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 10377836 - 10377895
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtga 64  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  |||||||||    
T  10377836 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtga 10377895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14585820 - 14585915
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||| ||||||||||||||| || |||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||||||| ||| ||||||    
T  14585820 ttagatttcatcatattatttgtaggcgttttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacgttttta 14585915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 29939443 - 29939586
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta-catttttatca 99  Q
    ||||||||||||||||||||||||  |||||||  |||||||| |||||||||   || ||||||||  ||| |||||||| | ||||   |||||| |     
T  29939443 ttaggttttatcatattatttgtagtcattttgccgttgtatgatattaacttagatgttgtgacttcgttcgtagattcatcttttatgttttttaacg 29939542  T
Q  100 atgtatgtatatgatatactctatcgatttaaatgaatgaatat 143  Q
    |||  ||||| |||| |||| ||||||||| ||| |||||||||    
T  29939543 atgattgtatctgatgtactatatcgatttgaataaatgaatat 29939586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 41060209 - 41060114
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| |||||||||||||||||||  ||||||||||||||||| ||| || ||  ||| ||||| ||| |||  ||||||| ||||||| ||||||    
T  41060209 ttagattttatcatattatttgtagccattttgttgttgtatgctatcaatttgggtgatgtgagtttgttcgcagattcatcctttacgttttta 41060114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 5046902 - 5046948
Alignment:
Q  7 tttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||||    
T  5046902 tttatcatattatttgtaggcattttatcgttgtatgttattaactt 5046948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 24186602 - 24186468
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    |||||||||||||||| || ||||||||  || ||||  |||||||||  ||| | ||| ||| ||   ||||||| | ||||| |||||||| |||| |    
T  24186602 ttttatcatattatttataggcattttgccgtcgtatactattaacttaggtgttatgagtttgttagcagattcatcttttacgtttttatcgatgttt 24186503  T
Q  106 gtatatgatatactctatcgatttaaatgaatgaa 140  Q
    ||||||||| ||||||||| |||| ||| ||||||    
T  24186502 gtatatgatgtactctatctatttgaataaatgaa 24186468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 39067394 - 39067352
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||||||| ||||||| |||||||||||||||||||||    
T  39067394 gatatactctatcaatttaaaagaatgaatatcgtttattttt 39067352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 41362157 - 41362211
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 165  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||| | ||||||    
T  41362157 tgatgtactctatcaatttgaatgaatgaatatcgtttatttttatcaaaaaaaa 41362211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5333572 - 5333621
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaa 50  Q
    |||| |||| |||||||||||||| |||||||||||||||||| ||||||    
T  5333572 ttagattttgtcatattatttgtatgcattttgttgttgtatgctattaa 5333621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 8412394 - 8412321
Alignment:
Q  75 agattcaccctttacatttttatcaatgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||||||||||||  |||||| | |||| ||||| |||| || ||||| ||||| ||||||||||||||||||    
T  8412394 agattcaccctttatgtttttagcgatgtttgtatctgatttaatctattgatttgaatgaatgaatatcgttt 8412321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 11968033 - 11967996
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttt 153  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  11968033 tactctatcaatttaaatgaatgaatatcgtttatttt 11967996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 471112 - 471029
Alignment:
Q  1 ttaggttttatcatattatttgtaagca--ttttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcac 82  Q
    |||| ||||||||||||||||||| |||  |||||| | ||||||||||||||||  ||| ||||| ||| ||| |||||||||    
T  471112 ttagattttatcatattatttgtaggcattttttgtcgatgtatgttattaacttgggtgatgtgattttgttcgtagattcac 471029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 13575909 - 13575869
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  13575909 tactctatcaatttaaatgaatgaatatcgtctatttttat 13575869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20559690 - 20559638
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||||||||||||  ||||||||  |||||||| |||||||||    
T  20559690 ttaggttttatcatattatttgtgggcattttgccgttgtatgctattaactt 20559638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20571252 - 20571200
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||||||||||||  ||||||||  |||||||| |||||||||    
T  20571252 ttaggttttatcatattatttgtgggcattttgccgttgtatgctattaactt 20571200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 429032 - 428989
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttatta 49  Q
    |||||||||||||||| |||||||||| | ||||||||||||||    
T  429032 ttttatcatattatttataagcattttttcgttgtatgttatta 428989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 21237959 - 21238077
Alignment:
Q  29 ttttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgtatatgatatactctatcgatt 128  Q
    |||||| |||||||  ||||||| |  ||| ||||| ||| |||| ||||||||||||||| |||||| | |||| ||  |||||| || |||||| |||    
T  21237959 ttttgtcgttgtatcctattaacatgggtgttgtgagtttgttcacagattcaccctttacgtttttagcgatgt-tgattatgatgtattctatcaatt 21238057  T
Q  129 taaatgaatgaatatcgttt 148  Q
    | ||||||||||||| ||||    
T  21238058 tgaatgaatgaatattgttt 21238077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 2234170 - 2234132
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  2234170 tactctatcaatttgaatgaatgaatatcgtttattttt 2234132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 2968944 - 2968982
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  2968944 tactctatcaatttgaatgaatgaatatcgtttattttt 2968982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 4757577 - 4757619
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttatga 158  Q
    ||||||||| |||| ||||||||||||||||||| ||||||||    
T  4757577 tactctatcaatttgaatgaatgaatatcgtttagttttatga 4757619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 7281977 - 7282019
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||||||  ||| |||||||||||||||||||||||||    
T  7281977 gatatactctataaattaaaatgaatgaatatcgtttattttt 7282019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 15286732 - 15286694
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  15286732 tactctatcaatttaaatgaatgaatatcatttattttt 15286694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 15467101 - 15467063
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  15467101 tactctatcaatttaaatgaatgaatatcatttattttt 15467063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 24790870 - 24790832
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  24790870 tactctatcaatttgaatgaatgaatatcgtttattttt 24790832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 27498312 - 27498170
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||||||||||||| ||  ||||||||  || |||||||| |||||  ||| | |||  || ||   |||||||||||||||  |||||   |    
T  27498312 ttagattttatcatattatttatagacattttgtctttatatgttatgaacttgggtgttatgagcttgtttgcagattcaccctttacgattttaatga 27498213  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatat 143  Q
    ||| ||||| |||| ||||||||| |||| |||||||||||||    
T  27498212 tgtttgtatctgatgtactctatcaatttgaatgaatgaatat 27498170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 31202877 - 31202915
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  31202877 tactctatcaatttgaatgaatgaatatcgtttattttt 31202915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34493145 - 34493231
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttt 87  Q
    |||| |||||| ||||||| | || ||||||||| |||| |||||||||||||  ||  ||||| ||| ||| ||||||||||||||    
T  34493145 ttagattttatgatattatatataggcattttgtcgttgcatgttattaacttgagttttgtgagtttgttcgtagattcacccttt 34493231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 1809938 - 1809901
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttt 153  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  1809938 tactctatcaatttgaatgaatgaatatcgtttatttt 1809901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 148
Target Start/End: Original strand, 10377931 - 10377964
Alignment:
Q  115 atactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||||||||||||| ||||||||||||||||||    
T  10377931 atactctatcgatttgaatgaatgaatatcgttt 10377964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 30026585 - 30026544
Alignment:
Q  113 atatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||||||||||| |||| ||||||| ||||||||||||||||    
T  30026585 atatactctatcaatttgaatgaataaatatcgtttattttt 30026544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 33347461 - 33347372
Alignment:
Q  7 tttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||||||||||||||||| |||||||||  ||||||| |||||| ||  ||| | ||| ||| |||  ||||||||| ||||| ||||||    
T  33347461 tttatcatattatttgtaggcattttgtcattgtatgctattaaattaggtgttatgagtttgttcgcagattcaccttttaccttttta 33347372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 6394294 - 6394250
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 50  Q
    ||||||||||||||||||| | |||||| |||| |||||||||||    
T  6394294 ttttatcatattatttgtatgtattttgatgttttatgttattaa 6394250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 9799722 - 9799678
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttattttta 155  Q
    |||| ||||||||| |||| |||||||||||||| ||||||||||    
T  9799722 tgatgtactctatcaatttgaatgaatgaatatcatttattttta 9799678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 10254351 - 10254395
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 50  Q
    |||| |||||||||||||| ||||||||||||  |||||||||||    
T  10254351 ttttgtcatattatttgtacgcattttgttgtcttatgttattaa 10254395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 20227219 - 20227175
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 50  Q
    |||||||||||||||||||  ||||| ||||||||||| ||||||    
T  20227219 ttttatcatattatttgtagacatttcgttgttgtatgctattaa 20227175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 152
Target Start/End: Complemental strand, 26673486 - 26673446
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattt 152  Q
    ||||||||||||| ||||||||||||| ||||| |||||||    
T  26673486 gatatactctatcaatttaaatgaatggatatcatttattt 26673446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 27110411 - 27110359
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| |||||||||||||||||||  |||||| | |||||||| |||||||||    
T  27110411 ttagattttatcatattatttgtagacattttatcgttgtatgctattaactt 27110359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 4e-40; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 40993304 - 40993447
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | ||||     
T  40993304 gttttatcatattatttgtaggcattttgtcgttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 40993403  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||||||||||||||||||||||    
T  40993404 tgtatctgatgtactctatcgatttaaatgaatgaatatcgttt 40993447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 9977158 - 9977011
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||||||||||||| ||  |||||||| |||||||| |||||||||   || ||||| |||||||| ||||||||||||||| |||||| |||    
T  9977158 ttagattttatcatattatttttagacattttgtcgttgtatgctattaacttggatgttgtgaattttttcacagattcaccctttacgtttttagcaa 9977059  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| ||||||||| |||||||||||||||||||||||    
T  9977058 tgtttgtatctgatgtactctatcaatttaaatgaatgaatatcgttt 9977011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 8001494 - 8001347
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||||||||||||||||||| || ||||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||||||||||| |||||| | |    
T  8001494 ttaggttttatcatattatttataggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcga 8001395  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| ||||  ||||||||||||| ||||||||||||||||||    
T  8001394 tgtttgtatctgatgcactctatcgatttgaatgaatgaatatcgttt 8001347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 37837406 - 37837253
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||| ||||| ||||||||  ||| |||| |||||||||  ||||||||| ||| |||  | ||||||||||||| |||||| | |    
T  37837406 ttaggttttatcatattacttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttagcga 37837307  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||| ||||| |||| |||||||||||||| |||||||||||||||||| |||||    
T  37837306 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtttgttttt 37837253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 45349747 - 45349594
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||| ||||| ||| |||  || |||||||||||| |||||| | |    
T  45349747 ttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcaggttcaccctttacgtttttagcga 45349648  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    | | ||||| |||| |||||||||||||||||| |||||||||||||| |||||    
T  45349647 tatttgtatctgatgtactctatcgatttaaattaatgaatatcgttttttttt 45349594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 28044704 - 28044557
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||||||||||||||||||| ||  |||||||  |||||||| |||||||||   || | ||| ||| ||| |||||||||||||||| |||||| | |    
T  28044704 ttaggttttatcatattatttttagacattttgccgttgtatgctattaacttggatgttatgagtttgttcgtagattcaccctttacgtttttagcga 28044605  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  28044604 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 28044557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 48061565 - 48061712
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| | ||| ||| |||  ||||||||||||||| ||||||   |    
T  48061565 ttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttatgagtttgttcgcagattcaccctttacgtttttagaga 48061664  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||  |||| |||||||||||||| ||||||||||||||||||    
T  48061665 tgtttgtacctgatgtactctatcgatttgaatgaatgaatatcgttt 48061712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 39171538 - 39171397
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||| ||| ||| ||   ||||||||||||||| |||||| | |    
T  39171538 ttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctatgagtttgtttgcagattcaccctttacgtttttagcga 39171439  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaata 142  Q
    ||| ||||| |||| |||||||||||||| ||||||| ||||    
T  39171438 tgtttgtatctgatgtactctatcgatttgaatgaataaata 39171397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 48316760 - 48316620
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||| ||| |||  ||||||||||||||  |||||| | |    
T  48316760 ttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttaggtttttagcga 48316661  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||       |||||||||||||||| ||||||||||||||||||    
T  48316660 tgtttg-------tatactctatcgatttgaatgaatgaatatcgttt 48316620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 12141256 - 12141108
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgt-gctgtgacttttttcatagattcaccctttacatttttatca 99  Q
    |||| ||||||||||||||||||| ||||||||  |||||||| |||||||||  || | ||||| ||| |||  | ||||||| ||||| |||||| |     
T  12141256 ttagattttatcatattatttgtatgcattttgccgttgtatgctattaacttgggttgttgtgagtttgttcgcatattcaccttttacgtttttagcg 12141157  T
Q  100 atgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  12141156 atgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 12141108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 34899551 - 34899412
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||   || ||||| ||| |||  ||||||||||||||| |||||| | ||||     
T  34899551 gttttatcatattatttgtatgcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 34899452  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||||| |||| ||||||||| |||| ||||||| ||||||    
T  34899451 tgtatttgatgtactctatcaatttgaatgaataaatatc 34899412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 28407861 - 28407719
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    |||||||||||||||||||  |||||||  |||||||| |||||||||   |||||||| ||| |||  ||||| ||||||||  |||||| | |||| |    
T  28407861 ttttatcatattatttgtagacattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagatttaccctttatgtttttagcgatgttt 28407762  T
Q  106 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||| |||| ||||||||| |||| ||||||||||||||||||    
T  28407761 gtatttgatgtactctatcaatttgaatgaatgaatatcgttt 28407719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 47590454 - 47590591
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  |||||| | |||||||||  ||| ||||| ||| ||   ||||| ||||||||| |||| | | |    
T  47590454 ttaggttttatcatattatttgtaggcattttgccgttgtaagctattaacttgggtgttgtgagtttgtttgcagatttaccctttacgttttcagcga 47590553  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatg 138  Q
    ||| | ||| ||||||||||||||||||| ||||||||    
T  47590554 tgtttatatctgatatactctatcgatttgaatgaatg 47590591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 42978753 - 42978889
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||||||||||||||||| |||| ||||||||  |||||||| |||||||||  ||| ||||| ||  |||  ||||||||||||||| |||||| | |    
T  42978753 ttaggttttatcatattatatgtaggcattttgccgttgtatgctattaacttgggtgttgtgagttcgttcgcagattcaccctttacgtttttagcga 42978852  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaat 137  Q
    ||| ||||| ||||  |||||||| |||| |||||||    
T  42978853 tgtttgtatctgatggactctatcaatttgaatgaat 42978889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 39328738 - 39328595
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||   |||| ||||||||  ||| |||| |||||||||  ||||||||| ||| |||  ||||| ||| ||||| |||| | | |    
T  39328738 ttaggttttatcatatt---tgtaggcattttgccgttttatgctattaacttgggtgctgtgaatttgttcgcagatttaccttttacgtttt-agcga 39328643  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| || || |||||||| ||||||||||||||||||    
T  39328642 tgtttgtatttgatgtaatccatcgatttgaatgaatgaatatcgttt 39328595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 13796873 - 13796825
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||||||    
T  13796873 gttttatcatattatttgtaggcattttgtcgttgtatgctattaactt 13796825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 19404705 - 19404560
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| || |||||  |||| | | |||||||||   |||||||| ||| |||  ||||||| |||||||||||||| | |    
T  19404705 ttagattttatcatattatttgtaggctttttgccgttgcacgctattaacttggatgctgtgagtttgttcgcagattcatcctttacatttttagcga 19404606  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||  |||| |||| ||||||||| |  | |||||||| |||||||||    
T  19404605 tgttcgtatctgatgtactctatcaa--tgaatgaatggatatcgttt 19404560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 24319915 - 24319875
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  24319915 tactctatcaatttaaatgaatgaatatcgtttatttttat 24319875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 9450085 - 9449998
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 88  Q
    |||||||||||||||||||||||| ||||||||  |||||||| |||||| ||  ||| ||||| ||| |||  | ||||||||||||    
T  9450085 ttaggttttatcatattatttgtaggcattttgccgttgtatgctattaatttaggtgttgtgagtttgttcgcatattcacccttta 9449998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 19297017 - 19297100
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 88  Q
    |||||||||||||||||||| |||||||| |||| |||| |||||| ||  ||| ||||| ||| |||  ||||||||||||||    
T  19297017 gttttatcatattatttgtaggcattttgctgttatatgctattaatttgggtgttgtgagtttgttcgcagattcacccttta 19297100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 41553382 - 41553288
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||||||||||| |||| || | ||||||  |||||||| |||||||||  ||||||||| ||| ||| |||||||||||||||| ||||||    
T  41553382 ttagattttatcatatcatttatacgtattttgccgttgtatgctattaacttg-gtgctgtgagtttgttcctagattcaccctttacgttttta 41553288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 46244195 - 46244149
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaact 52  Q
    ||||||||||||||||||| |||||||||  ||||||||||||||||    
T  46244195 ttttatcatattatttgtaggcattttgtcattgtatgttattaact 46244149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 3223026 - 3222957
Alignment:
Q  27 cattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||||||  |||||||||||||||||| |||| ||||| ||| |||||||||| | ||||||| ||||||    
T  3223026 cattttgccgttgtatgttattaacttgtgtgttgtgagtttgttcatagatttatcctttacgttttta 3222957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 11833447 - 11833496
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 165  Q
    ||||||||| |||| |||||||||||||||||||||||||| | ||||||    
T  11833447 tactctatcaatttgaatgaatgaatatcgtttatttttatcaaaaaaaa 11833496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 15670507 - 15670462
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||    
T  15670507 tgatatactcaatcaatttgaatgaatgaatatcgtttatttttat 15670462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 17773465 - 17773420
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaacttt 54  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||    
T  17773465 tatcatattatttgtaagcattttactgttgtatgctattaacttt 17773420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24069342 - 24069289
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttt 54  Q
    |||| ||||||||||||||||||| ||||||| | |||||||| ||||||||||    
T  24069342 ttagattttatcatattatttgtaggcattttatcgttgtatgctattaacttt 24069289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 25287134 - 25286980
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||||||||||||||||  ||||||| ||||||||| ||||||||    || ||||| | ||| |  |||||||   |||||||||||| | |    
T  25287134 ttagattttatcatattatttgtagccattttgctgttgtatgctattaactcggatgttgtgagtatttgc--agattcattttttacatttttaacga 25287037  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcg-tttatttttat 156  Q
    | | | ||| |||| ||||||||| |||| ||||||| ||||||| |||||||||||    
T  25287036 tctttatatctgatgtactctatcaatttgaatgaataaatatcgttttatttttat 25286980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 10094866 - 10094906
Alignment:
Q  113 atatactctatcgatttaaatgaatgaatatcgtttatttt 153  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  10094866 atatactctatcaatttgaatgaatgaatatcgtttatttt 10094906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28476369 - 28476469
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| ||||||||  ||   |||||||||||||  ||||||||| ||| ||   ||||||||| ||||| |||||| |||    
T  28476369 ttagattttatcatattatttgtaggcattttgccgtgcaatgttattaacttgagtgctgtgagtttgtttgcagattcaccatttacgtttttagcaa 28476468  T
Q  101 t 101  Q
    |    
T  28476469 t 28476469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 13592433 - 13592304
Alignment:
Q  6 ttttatcatat-tatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    ||||||||||| | |||||| ||||| ||| ||| |||| |||||||||   |||||||| ||| |||  ||||||| |||||||||||||| || |||     
T  13592433 ttttatcatatatttttgtaggcattatgtcgttatatgctattaacttcgatgctgtgagtttgttcgcagattcatcctttacatttttagcagtgt- 13592335  T
Q  105 tgtatatgatatactctatcgatttaaatgaatg 138  Q
    || |||||   |||||||||||||| ||||||||    
T  13592334 tgaatatg---tactctatcgattttaatgaatg 13592304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 35133090 - 35133185
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||| |||||||||||| || ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||| ||| ||||||    
T  35133090 ttagatttcatcatattatttctaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcagattcaccctatacgttttta 35133185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 35665083 - 35664988
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| |||||||||||||||| |  ||||||||| |||||||| |||||||||  || |||||| ||| |||| |||||   ||||||| ||||||    
T  35665083 ttagattttatcatattattttttggcattttgtcgttgtatgctattaacttgggtactgtgagtttgttcacagatttctcctttacgttttta 35664988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 2623021 - 2623059
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  2623021 tactctatcaatttgaatgaatgaatatcgtttattttt 2623059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 4621072 - 4621034
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  4621072 tactctatcaatttgaatgaatgaatatcgtttattttt 4621034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 156
Target Start/End: Original strand, 10624221 - 10624251
Alignment:
Q  126 atttaaatgaatgaatatcgtttatttttat 156  Q
    |||||||||||||||||||||||||||||||    
T  10624221 atttaaatgaatgaatatcgtttatttttat 10624251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 21991091 - 21991129
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  21991091 tactctatcaatttgaatgaatgaatatcgtttattttt 21991129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 23808751 - 23808793
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||||||||| || |||| ||||||||||||||||||||||||    
T  23808751 gatatactctctcaatttgaatgaatgaatatcgtttattttt 23808793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 27535856 - 27535894
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  27535856 tactctatcaatttaaatgaataaatatcgtttattttt 27535894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 32741168 - 32741210
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||    
T  32741168 gatatactctatcaatttgaataaatgaatatcgtttattttt 32741210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 33095823 - 33095773
Alignment:
Q  121 tatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatata 171  Q
    ||||||||| |||||||||||||||||||||||| | | |||| |||||||    
T  33095823 tatcgatttgaatgaatgaatatcgtttatttttgtaaaaaaatatatata 33095773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 35362818 - 35362776
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||||||| ||||||||||||||||||| || ||||||    
T  35362818 gatatactctatcaatttaaatgaatgaatatctttaattttt 35362776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 37375748 - 37375710
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  37375748 tactctatcaatttgaatgaatgaatatcgtttattttt 37375710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 38277226 - 38277264
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  38277226 tactctatcaatttgaatgaatgaatatcgtttattttt 38277264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 43847398 - 43847440
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||||||| |||| |||||||||||||| |||||||||    
T  43847398 gatatactctatcaatttgaatgaatgaatatcatttattttt 43847440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 44482570 - 44482532
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  44482570 tactctatcaatttgaatgaatgaatatcgtttattttt 44482532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 48643518 - 48643480
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  48643518 tactctatcaatttgaatgaatgaatatcgtttattttt 48643480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 8180230 - 8180267
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttt 153  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  8180230 tactctatcaatttgaatgaatgaatatcgtttatttt 8180267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 15123714 - 15123669
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    |||| ||||||||| |||| |||||||||||||| |||||||||||    
T  15123714 tgatctactctatcaatttgaatgaatgaatatcatttatttttat 15123669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 21552164 - 21552123
Alignment:
Q  113 atatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||||||||||| |||||||||||||||| |||||| |||||    
T  21552164 atatactctatcaatttaaatgaatgaatgtcgtttgttttt 21552123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 30992530 - 30992481
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 165  Q
    ||||||||| |||| |||||||||||||| ||||||||||| | ||||||    
T  30992530 tactctatcaatttgaatgaatgaatatcatttatttttataaaaaaaaa 30992481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 39707698 - 39707735
Alignment:
Q  117 actctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  39707698 actctatcaatttgaatgaatgaatatcgtttattttt 39707735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3398333 - 3398385
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| |||||||||||||||| || |||||||   ||||||||||||||||||    
T  3398333 ttagattttatcatattatttttaggcattttaccgttgtatgttattaactt 3398385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 6667826 - 6667862
Alignment:
Q  118 ctctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  6667826 ctctatcaatttgaatgaatgaatatcgtttattttt 6667862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24770389 - 24770441
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||||||||| |||  |||||||  ||| ||||||||||||||    
T  24770389 ttaggttttatcatattattggtagacattttgccgttttatgttattaactt 24770441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29617647 - 29617595
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| |||||||||||||||||||  |||||||||||||  || |||||||||    
T  29617647 ttagattttatcatattatttgtagacattttgttgttgagtgctattaactt 29617595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 37400002 - 37400046
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    ||||||||||||| |||| |||||||||||||  |||||||||||    
T  37400002 gatatactctatcaatttgaatgaatgaatataatttatttttat 37400046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 154
Target Start/End: Original strand, 37714903 - 37714931
Alignment:
Q  126 atttaaatgaatgaatatcgtttattttt 154  Q
    |||||||||||||||||||||||||||||    
T  37714903 atttaaatgaatgaatatcgtttattttt 37714931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 38798924 - 38799052
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| ||||||||  ||  |||| |||||||||   || ||||| ||| |||  ||||||||| | ||| |||||| | |    
T  38798924 ttagattttatcatattatttgtaggcattttgccgtcttatgctattaacttggatgttgtgagtttgttcgcagattcaccttgtacgtttttaacga 38799023  T
Q  101 tgtatgtatatgatatactctatcgattt 129  Q
    ||| |||| ||||  || |||||||||||    
T  38799024 tgtttgtacatgacgtaatctatcgattt 38799052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 44311732 - 44311688
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 50  Q
    |||||||||||||||||||  ||||| ||||||||||| ||||||    
T  44311732 ttttatcatattatttgtagacatttcgttgttgtatgctattaa 44311688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 46821582 - 46821542
Alignment:
Q  108 atatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||||||||| |||||  |||||||||||||||||||||||    
T  46821582 atatgatatattctattaatttaaatgaatgaatatcgttt 46821542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 46822690 - 46822639
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| |||||||||||||||||| ||||||||||  ||||||| |||||||||    
T  46822690 ttagattttatcatattatttgt-agcattttgtcattgtatgctattaactt 46822639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 49148058 - 49148010
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttt 54  Q
    ||||||||||||| ||||  ||||||||| |||||||| ||||||||||    
T  49148058 ttttatcatattaattgttggcattttgtcgttgtatgctattaacttt 49148010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 4e-40; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 26825574 - 26825717
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||| |||||||||||||||| |||||| | ||||     
T  26825574 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagctatgtt 26825673  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  26825674 tgtatttgatatactctatcgatttgaatgaatgaatatcgttt 26825717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 24229732 - 24229585
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| |||  |||||||| |||||| |||||| | |    
T  24229732 ttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcactctttacgtttttagcga 24229633  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| | ||| |||| |||||||||||||| ||||||||||||||||||    
T  24229632 tgtttatatctgatgtactctatcgatttgaatgaatgaatatcgttt 24229585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 13007373 - 13007516
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||   ||||||||||||||| |||||| | ||||     
T  13007373 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 13007472  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||    
T  13007473 tgtatttgatgtactctatcaatttgaatgaatgaatatcgttt 13007516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 14726409 - 14726262
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||| ||| |||  |||||||||   |||||||| ||| |||| ||||||||||||||| ||||||   |    
T  14726409 ttaggttttatcatattatttgtaggcattttgtcgttttataatattaacttggatgctgtgagtttgttcacagattcaccctttacgtttttagtga 14726310  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| || ||||||||||| ||||||||||||||||||    
T  14726309 tgtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttt 14726262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 34945537 - 34945680
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    ||||||||||||||||| || ||||||||| |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | ||||     
T  34945537 gttttatcatattatttataggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 34945636  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||| |||||| |||||||||||    
T  34945637 tgtatctgatgtactctatcgattttaatgaaagaatatcgttt 34945680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 9113669 - 9113526
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| |||||||   |||||||| |||||||||  ||| | ||| ||| |||  ||||||||||||||| |||||| | ||||     
T  9113669 gttttatcatattatttgtaggcatttttccgttgtatgctattaacttgggtgttctgagtttgttcgcagattcaccctttacgtttttagcgatgtt 9113570  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  9113569 tgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 9113526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 25980301 - 25980444
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||| ||||| ||| ||   ||||||||||||||| |||||| | ||||     
T  25980301 gttttatcatattatttgtaggcattttgccgttatatgctattaacttgggtgatgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 25980400  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    || || ||||||||||||||||||| ||||||||||||||||||    
T  25980401 tgcatctgatatactctatcgatttgaatgaatgaatatcgttt 25980444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 38597937 - 38598084
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  | ||||||||||||| |||||| | |    
T  38597937 ttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctttacgtttttagcga 38598036  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| ||||||||| |||| |||||||||||| |||||    
T  38598037 tgtttgtatctgatgtactctatcaatttgaatgaatgaataacgttt 38598084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 8096446 - 8096300
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||   || |||| |||||||||  ||| ||||| ||| |||  | |||||||||||||||||||| | |    
T  8096446 ttaggttttatcatattatttgtaggcattttgccattttatgctattaacttgggtggtgtgagtttgttcgcaaattcaccctttacatttttagcga 8096347  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| | || |||||||||||||| ||||||||||||||||||    
T  8096346 tgtttgtatct-atgtactctatcgatttgaatgaatgaatatcgttt 8096300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 14082344 - 14082197
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||| |||||||| |||||||||   || || || ||| |||  ||||||||||||||  |||||| | |    
T  14082344 ttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttcgatgatgggagtttgttcgcagattcaccctttatgtttttagcga 14082245  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| | |||||||||||| |||||||| |||||||||    
T  14082244 tgtttgtatctgatgtgctctatcgatttgaatgaatggatatcgttt 14082197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 38007498 - 38007644
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||   || |||| |||||||||  ||||||||| ||| |||| | ||||||| ||||| |||||| | |    
T  38007498 ttaggttttatcatattatttgtaggcattttgccttt-tatgctattaacttgggtgctgtgagtttgttcacatattcaccttttacgtttttagcga 38007596  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| || ||||||||||| ||||||||||||||||||    
T  38007597 tgtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttt 38007644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 6012082 - 6011939
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||| ||||||||||||||| ||||| |   ||| |||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | ||||     
T  6012082 gtttgatcatattatttgtaggcattctaccgttttatgctattaacttgggtgatgtgagtttgttcgcagattcaccctttacgtttttaacgatgtt 6011983  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  6011982 tgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 6011939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 10722901 - 10723048
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| |||||||   | ||||||||||||||||  ||| ||||| ||| ||| |||||||||| |||||||||||| | |    
T  10722901 ttagattttatcatattatttgtaggcatttttccgctgtatgttattaacttgagtgttgtgagtttgttcgtagattcaccatttacatttttagcga 10723000  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    | | ||||| |||| ||||| ||| |||| ||||||| ||||||||||    
T  10723001 tatttgtatttgatgtactcgatcaatttgaatgaataaatatcgttt 10723048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 26878056 - 26877910
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| ||| ||||| ||||||| | ||||||||   || ||||| ||| |||  ||||||| ||||||| |||||| |||    
T  26878056 ttagattttatcatattatttgtaggcactttgtcgttgtatct-attaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttaccaa 26877958  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| |||||||||| ||||||||| |||  ||||||||||||||||||    
T  26877957 tgtttgtatatgatgtactctatcaattcgaatgaatgaatatcgttt 26877910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 11976883 - 11976740
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| |||||||   ||| ||||||||||||||   || ||||| ||| |||  ||||||| |||||||||||||| | |    
T  11976883 ttaggttttatcatattatttgtaggcattttcccgttttatgttattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcga 11976784  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||| || || |||| || |||||| |||| ||||||| ||||||    
T  11976783 tgtttgcatctgatgtaatctatcaattttaatgaattaatatc 11976740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 35850939 - 35851080
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||| | ||| ||||  ||| |||| |||||||||  |||||| |  ||| |||| | ||||||| ||||| |||||| | |    
T  35850939 ttaggttttatcatattatttgcaggcactttgccgttttatgctattaacttgggtgctgag--tttgttcacaaattcaccttttacgtttttagcga 35851036  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||| ||||| ||||||| ||||| ||||| ||||||||||||||    
T  35851037 tgtttgtatctgatataatctattgatttgaatgaatgaatatc 35851080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 11192525 - 11192572
Alignment:
Q  7 tttatcatattatttgtaagcattttgttgttgtatgttattaacttt 54  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  11192525 tttatcgtattatttgtaagcattttgtcgttgtatgttattaacttt 11192572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 8514595 - 8514547
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttt 54  Q
    ||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  8514595 ttttatcatattatttgtaaatattttgtcgttgtatgttattaacttt 8514547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14211367 - 14211462
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||| ||||||||||||||| |||||||  ||||||||| |||||||||  ||| ||||| ||| |||  ||||||||||| ||| ||||||    
T  14211367 ttagatttcatcatattatttgtaggcatttttctgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacgttttta 14211462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39567410 - 39567505
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||| |||||||||||||||  |||||||| |||||||||||||| |||  ||| ||||| ||| ||| |||||||||| | ||| ||||||    
T  39567410 ttagatttcatcatattatttgtagacattttgtcgttgtatgttattaccttgggtgttgtgagtttgttcgtagattcaccatatacgttttta 39567505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 1409638 - 1409787
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttg--tgctgtgacttttttcatagattcaccctttacatttttatc 98  Q
    |||| ||| ||||||||||||| |   ||||||  |||||| | ||||||||||||  || ||||| ||| |||||||||||| | ||||  |||||| |    
T  1409638 ttagatttaatcatattatttgaagatattttgccgttgtacgctattaacttttggatggtgtgaatttattcatagattcagcttttatgtttttagc 1409737  T
Q  99 aatgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
     |||| ||||| |||| ||||||| | |||| ||| ||||||||||||||    
T  1409738 gatgtttgtatctgatgtactctaccaatttgaataaatgaatatcgttt 1409787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 7151225 - 7151263
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  7151225 tactctatcgattttaatgaatgaatatcgtttattttt 7151263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 144
Target Start/End: Original strand, 13422078 - 13422215
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    |||||||||||||| |||| |||||||   ||| |||| |||||||||   || ||||| ||| |||  | ||||| ||||||| |||||| | |||| |    
T  13422078 ttttatcatattatatgtaggcatttttccgttttatgctattaacttggatgttgtgagtttgttcgcatattcatcctttacgtttttagcgatgttt 13422177  T
Q  106 gtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||||||||| || |||||| |||| ||||||||||||||    
T  13422178 gtatatgatgta-tctatcaatttgaatgaatgaatatc 13422215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 41630642 - 41630720
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagatt 79  Q
    |||| |||||||||||||||||||  |||||||| |||||||| |||||||||  ||| ||||| ||| |||| |||||    
T  41630642 ttagattttatcatattatttgtagacattttgtcgttgtatgctattaacttaggtgttgtgagtttgttcacagatt 41630720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7930317 - 7930358
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtat 42  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  7930317 ttaggttttatcatattatttgtaggcattttgtcgttgtat 7930358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11867789 - 11867838
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaa 50  Q
    |||| |||||| |||||||||||| |||||||||||||||||| ||||||    
T  11867789 ttagattttattatattatttgtaggcattttgttgttgtatgctattaa 11867838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 6281469 - 6281513
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||    
T  6281469 gatatactctatcaatttgaatgaatgaatatcgtttacttttat 6281513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 24874684 - 24874764
Alignment:
Q  16 ttatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| |||||| | ||||| ||||||||||||||||||  ||| ||||| ||| |||| ||||||| ||||||| ||||||    
T  24874684 ttatatgtaagtaatttgtcgttgtatgttattaacttgggtgatgtgaatttgttcacagattcatcctttacgttttta 24874764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31391701 - 31391649
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    ||||||||||||||||||| |||| |||||||  ||||||||| |||||||||    
T  31391701 ttaggttttatcatattatatgtaggcatttttctgttgtatgctattaactt 31391649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 42396206 - 42396162
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    |||||| |||||| |||| ||||||||||||||||||||||||||    
T  42396206 gatatattctatcaatttgaatgaatgaatatcgtttatttttat 42396162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2979254 - 2979159
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||| ||||||||||||||| ||||| ||  |||||||| |||||||||   || ||||| ||| |||  ||||||||||| ||||||||||    
T  2979254 ttagatttcatcatattatttgtaggcattgtgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctatacattttta 2979159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 6217043 - 6217185
Alignment:
Q  6 ttttatcatattatttgtaagcattt-tgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    ||||||||||||||||||| ||||||  ||  ||||||| |||||||||  ||||||||| ||| |||  ||||||| ||||| | ||||||   | ||     
T  6217043 ttttatcatattatttgtaggcatttaagtcattgtatgctattaacttgagtgctgtgagtttgttcgcagattca-cctttgcgtttttagtgacgtt 6217141  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| ||||  ||| |||| |||| ||||||||||||||||||    
T  6217142 tgtatttgatgcactatatcaatttgaatgaatgaatatcgttt 6217185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 28540854 - 28540759
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||| |||||||||||||||  ||||||   |||||||| |||||||||  ||||||||| ||| |||  ||||||||||| ||| ||||||    
T  28540854 ttagatttcatcatattatttgtagacatttttccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacgttttta 28540759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 42505110 - 42505067
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||    
T  42505110 tgatgtactctatcaatttgaatgaatgaatatcgtttattttt 42505067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 8514487 - 8514445
Alignment:
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgtt 147  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||    
T  8514487 tgtatttgatatactctatcgatttaaataaataaatatcgtt 8514445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 9196723 - 9196685
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  9196723 tactctatcaatttgaatgaatgaatatcgtttattttt 9196685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 17331757 - 17331795
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  17331757 tactctatcaatttgaatgaatgaatatcgtttattttt 17331795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 23881808 - 23881770
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  23881808 tactctatcaatttgaatgaatgaatatcgtttattttt 23881770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 26294039 - 26294077
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  26294039 tactctatctatttgaatgaatgaatatcgtttattttt 26294077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 26294770 - 26294728
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||||||| |||| |||||||||||| |||||||||||    
T  26294770 gatatactctatcaatttgaatgaatgaataccgtttattttt 26294728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 34431493 - 34431531
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  34431493 tactctatcaatttgaatgaatgaatatcgtttattttt 34431531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 38961573 - 38961619
Alignment:
Q  7 tttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    ||||||| ||||||| || ||||||||||||| ||||||||||||||    
T  38961573 tttatcacattatttataggcattttgttgttttatgttattaactt 38961619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 39531100 - 39531062
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  39531100 tactctatcaatttgaatgaatgaatatcgtttattttt 39531062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 3740761 - 3740798
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttt 153  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  3740761 tactctatcaatttgaatgaatgaatatcgtttatttt 3740798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 6886884 - 6886847
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttt 153  Q
    ||||||||| ||||||||||||||||||| ||||||||    
T  6886884 tactctatcaatttaaatgaatgaatatcttttatttt 6886847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 19121052 - 19121145
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttt 94  Q
    ||||||||||||||||||||||||  | ||||| | ||||||| |||||| ||   || ||||| ||| |||  ||||||||||||||| ||||    
T  19121052 ttaggttttatcatattatttgtagacgttttgctcttgtatgatattaatttggatgatgtgagtttgttcgcagattcaccctttacgtttt 19121145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 4726709 - 4726657
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatat 168  Q
    ||||||||| |||| |||||||||||||| ||||||||| | | |||||||||    
T  4726709 tactctatcaatttgaatgaatgaatatcatttatttttgtcaaaaaaaatat 4726657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 6639408 - 6639448
Alignment:
Q  114 tatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| | |||| ||||||||||||||||||||||||    
T  6639408 tatactctaccaatttgaatgaatgaatatcgtttattttt 6639448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 13677529 - 13677565
Alignment:
Q  131 aatgaatgaatatcgtttatttttatgagaaaaaata 167  Q
    |||||||||||||||||||||||||| | ||||||||    
T  13677529 aatgaatgaatatcgtttatttttataaaaaaaaata 13677565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 22978746 - 22978702
Alignment:
Q  110 atgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||| |||| ||||||||  ||||||||||||||||||||||||    
T  22978746 atgatgtactttatcgattagaatgaatgaatatcgtttattttt 22978702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 35920939 - 35920895
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 50  Q
    ||||||||||||||||||| |||||||||  ||||||| ||||||    
T  35920939 ttttatcatattatttgtaggcattttgtcattgtatgctattaa 35920895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 4e-40; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 10229620 - 10229763
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||| |||||||||||||||| |||||| | ||||     
T  10229620 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagctatgtt 10229719  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  10229720 tgtatttgatatactctatcgatttgaatgaatgaatatcgttt 10229763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 9998611 - 9998754
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||| |||||||||||||||| |||||| | ||||     
T  9998611 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagctatgtt 9998710  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  9998711 tgtatttgatgtactctatcgatttgaatgaatgaatatcgttt 9998754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 10108380 - 10108523
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||| |||||||||||||||| |||||| | ||||     
T  10108380 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagctatgtt 10108479  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  10108480 tgtatttgatgtactctatcgatttgaatgaatgaatatcgttt 10108523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 10233214 - 10233357
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||| || ||||||||||||  |||||||| ||||     
T  10233214 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtacattcaccctttatgtttttatctatgtt 10233313  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  10233314 tgtatttgatgtactctatcgatttgaatgaatgaatatcgttt 10233357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 45568393 - 45568246
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | |    
T  45568393 ttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttattcgcagattcaccctttacgtttttagcga 45568294  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  45568293 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 45568246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 9797478 - 9797335
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||| ||| ||  || ||||||||||||| || ||| | ||||     
T  9797478 gttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgtttgtatattcaccctttacgttcttagcgatgtt 9797379  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||| ||||||||| ||||||||||||||||||    
T  9797378 tgtatctgatgtactatatcgatttgaatgaatgaatatcgttt 9797335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 21313176 - 21313323
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||||||||||||||||  |||||||  |||||||| |||||||||  ||||||||| ||| |||  |||||||||||||||||||||| |      
T  21313176 ttagattttatcatattatttgtagccattttgccgttgtatgctattaacttgggtgctgtgagtttgttcggagattcaccctttacatttttagcgg 21313275  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||||||||| ||| |||| ||||||||||||||||||    
T  21313276 tgtttgtatctgatatactcaatcaatttgaatgaatgaatatcgttt 21313323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 21533757 - 21533614
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||| ||| ||||| |||||| | |    
T  21533757 ttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagatttaccttttacgtttttagcga 21533658  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||| ||||| |||| |||||||||||||| ||||||||||||||    
T  21533657 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatc 21533614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 40487465 - 40487612
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  ||| ||||||||||||||  ||| ||||| ||| |||  | |||||| |||||  |||||| | |    
T  40487465 ttaggttttatcatattatttgtaggcattttgccgttatatgttattaacttgggtgttgtgagtttgttcgcaaattcactctttatgtttttagcga 40487564  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  40487565 tgtttgtatctgatatactctatcgatttgaatgaatgaatatcgttt 40487612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 43017028 - 43017175
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||| ||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||| | ||||| ||||||| |||||| | |    
T  43017028 ttaggtgttatcatattatttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttattcacatattcatcctttacgtttttagcga 43017127  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  43017128 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 43017175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 48650678 - 48650539
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  |||||||||||||||||||||| | || |     
T  48650678 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacatttttagcgatatt 48650579  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||||| |||| |||||||||||||| ||||||||||||||    
T  48650578 tgtatctgatgtactctatcgatttgaatgaatgaatatc 48650539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 52923061 - 52922918
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| |||||||   |||||||| |||||||||   |||||||| ||| |||  ||||||||||||||| |||||| | ||||     
T  52923061 gttttatcatattatttgtaggcattttaccgttgtatgctattaacttggctgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 52922962  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  52922961 tgtatttgatgtactctatcgatttgaatgaatgaatatcgttt 52922918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 6954640 - 6954497
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    ||||||||| |||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||   ||||||||||||||| |||||| | ||||     
T  6954640 gttttatcaaattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 6954541  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||  |||||||||||||| ||||||||||||||||||    
T  6954540 tgtatctgaagtactctatcgatttgaatgaatgaatatcgttt 6954497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 33580020 - 33580165
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| ||||||   |    
T  33580020 ttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgattttgttcgcagattcaccctttacgtttttagtga 33580119  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgt 146  Q
    ||| ||||| |||| || ||||||||||| ||||||||||||||||    
T  33580120 tgtttgtatttgatgtaatctatcgatttgaatgaatgaatatcgt 33580165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 54149136 - 54149284
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    ||||||||||||||||||| ||||| ||| |||||||| ||||||| |  ||| ||||| ||  |||  || |||||||||||| |||||| | |||| |    
T  54149136 ttttatcatattatttgtaggcattatgtcgttgtatgctattaacctgggtgatgtgagttagttcgcaggttcaccctttacgtttttagcgatgttt 54149235  T
Q  106 gtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||| |||| |||||||||||||| ||||||||||||||||||| ||||    
T  54149236 gtatctgatgtactctatcgatttgaatgaatgaatatcgtttaatttt 54149284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 12050596 - 12050449
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||   |  ||||| ||| |||  | ||||||||||||||||||||   |    
T  12050596 ttaggttttatcatattatttgtaagcattttgtcgttgtatgttattaacttgaatagtgtgagtttgttcgcaaattcaccctttacatttttagaga 12050497  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| | |||   || ||| |||| ||||||||||||||||||||||||    
T  12050496 tgtttatattcaatgtaccctattgatttaaatgaatgaatatcgttt 12050449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 46304468 - 46304322
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||||||||||||||||| |||| |||| |||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | |    
T  46304468 ttaggttttatcatattatatgtaggcatgttgccgttgtatgctattaacttgagtgttgtgagtttgttcgcagattcaccctttacgtttttagc-a 46304370  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| ||||||||| |||| ||||||||||||||||||    
T  46304369 tgtttgtatctgatgtactctatcaatttgaatgaatgaatatcgttt 46304322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 21431757 - 21431902
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa--tg 102  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  |||||||||  || |||  ||||||||| ||||| |||||| | |  ||    
T  21431757 gttttatcatattatttgtaggcattttgccgttgtatgatattaacttgggtgctgtgagattgttcgcagattcaccatttacgtttttagcgatgtg 21431856  T
Q  103 tatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    | ||||| |||| |||||||||||||| ||||||||||| ||||||    
T  21431857 tttgtatctgatgtactctatcgatttgaatgaatgaatgtcgttt 21431902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 44959917 - 44959780
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||   ||||||| |||||||||   |||||||| ||| ||   ||||||||||||||| |||||| | ||||     
T  44959917 gttttatcatattatttgtaggcattttgccattgtatgctattaacttggatgctgtgagtttatttgcagattcaccctttacgtttttagcgatgtt 44959818  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaata 142  Q
    ||||| |||| || ||||||||||| ||||||||||||    
T  44959817 tgtatctgatgtattctatcgatttgaatgaatgaata 44959780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 42460889 - 42460981
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattt 93  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |||||||||  || |||||| ||| |||  |||||||||||||||||||    
T  42460889 ttagattttatcatattatttgtaggcattttgttgttgtatgctattaacttgggtactgtgagtttgttcgcagattcaccctttacattt 42460981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 38545939 - 38546086
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||| || || ||| |||  ||||||||||||||| ||||||   |    
T  38545939 ttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtggtgggagtttgttcccagattcaccctttacgtttttagtga 38546038  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||  || ||||||||||| ||||||| ||||||||||    
T  38546039 tgtttgtatctgaggtaatctatcgatttgaatgaataaatatcgttt 38546086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 40556846 - 40556989
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||  ||||  ||| ||||| ||| |||  ||||||||||||||  |||||| | ||||     
T  40556846 gttttatcatattatttgtaggcattttgccgttgtatgctatgcacttgggtgttgtgagtttgttcgcagattcaccctttatgtttttagcgatgtt 40556945  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||| | ||||||| ||||||||||||||||||    
T  40556946 tgtatttgatgtactatgtcgatttgaatgaatgaatatcgttt 40556989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 47896292 - 47896438
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||| ||||||||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| ||| ||||||| |||||||  ||||||   |    
T  47896292 ttaggttttatcttattatttgta-gcattttgtcgttgtatgctattaacttgagtgttgtgagtttgttcgtagattctccctttaagtttttaggga 47896390  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| | || ||||||||| |||| ||| ||||||||||||||    
T  47896391 tgtttgtatttaatgtactctatcaatttgaatcaatgaatatcgttt 47896438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 7448858 - 7448710
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||| |||||||||||||||  |||||||  | |||||| |||||||||  ||| ||||| ||| |||  ||||||||| ||||| |||||||| ||||     
T  7448858 gtttcatcatattatttgtagacattttgccgctgtatgctattaacttaggtgatgtgagtttgttcgcagattcaccatttacgtttttatcgatgtt 7448759  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgtttatttt 153  Q
    | ||| || | ||||||||| |||| |||||||||||||||||| ||||    
T  7448758 tatatctgttgtactctatcaatttgaatgaatgaatatcgtttgtttt 7448710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 7457000 - 7456852
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||| |||||||||||||||  |||||||  | |||||| |||||||||  ||| ||||| ||| |||  ||||||||| ||||| |||||||| ||||     
T  7457000 gtttcatcatattatttgtagacattttgccgctgtatgctattaacttaggtgatgtgagtttgttcgcagattcaccatttacgtttttatcgatgtt 7456901  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgtttatttt 153  Q
    | ||| || | ||||||||| |||| |||||||||||||||||| ||||    
T  7456900 tatatctgttgtactctatcaatttgaatgaatgaatatcgtttgtttt 7456852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 4711626 - 4711769
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| ||   ||||||| ||||||  ||||||   ||||     
T  4711626 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgtttgcagattcatcctttatgtttttagtgatgtt 4711725  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| ||||||||||||||   ||||||||||||||||    
T  4711726 tgtatctgatgtactctatcgatttggttgaatgaatatcgttt 4711769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 43488538 - 43488392
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||||||||||||||||||| || || |||||  |||||||| |||||| ||  ||||||||| ||| |||  ||||||| | |||||  ||||| | |    
T  43488538 ttaggttttatcatattatttttaggctttttgccgttgtatgctattaatttgggtgctgtgagtttgttcgcagattcatcatttac-gttttagcga 43488440  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| | || |||||||||||||| ||||||||||||||||||    
T  43488439 tgtttgtatctaatgtactctatcgatttgaatgaatgaatatcgttt 43488392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 47041996 - 47041853
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||| ||||||||||||||| || |||| | ||| |||| |||||||||  ||| | ||| ||| |||  ||||||||| ||||| |||||| |||    
T  47041996 ttaggtttcatcatattatttgtaggcgttttatcgttttatgctattaacttaggtgatatgagtttgttcgcagattcaccttttacgtttttagcaa 47041897  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||| ||||| |||| || |||||| |||| ||||||||||||||    
T  47041896 tgtttgtatctgatgtaatctatctatttgaatgaatgaatatc 47041853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 36461379 - 36461238
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||||||||||||||||||||||  ||||||||      ||| |||||||||  ||||||||| ||| ||   |||||||||||||||||||||| | |    
T  36461379 ttaggttttatcatattatttgtagccattttgt------atgctattaacttgagtgctgtgagtttgttagcagattcaccctttacatttttagcga 36461286  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| | || ||||||||| |||| ||||||| ||||| ||||    
T  36461285 tgtttgtatctaatgtactctatcaatttgaatgaattaatattgttt 36461238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 41818360 - 41818450
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    ||||||| ||||||||||| |||||||||||||| ||| ||||||| || ||| ||||| ||| ||| ||| ||||||||||| |||||||    
T  41818360 ttttatcgtattatttgtaggcattttgttgttgcatgctattaacattggtgatgtgagtttgttcgtagtttcaccctttatattttta 41818450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 21289762 - 21289667
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||| ||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||||||| ||| ||||||    
T  21289762 ttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacgttttta 21289667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 37040909 - 37041055
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||| ||||||||| ||||| |||||||||  || ||||||||||||||  ||||||||| ||| |||  || || ||||||||| ||| || | |    
T  37040909 ttagatttaatcatattagttgta-gcattttgtcattttatgttattaacttgggtgctgtgagtttgttcgcagttttaccctttacgtttctagcga 37041007  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    | | ||||| |||| ||||||||| || | ||||||||||||||||||    
T  37041008 tttttgtatctgatgtactctatcaatctgaatgaatgaatatcgttt 37041055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 35175553 - 35175690
Alignment:
Q  10 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgtat 109  Q
    |||||||| |||||| |||||||||  ||||||| |||||||||  ||| ||||| ||| |||  ||||||| | ||||| |||||| | |||| ||  |    
T  35175553 atcatattgtttgtaggcattttgtcattgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcttttacgtttttagcgatgt-tgatt 35175651  T
Q  110 atgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| || |||||| |||| ||||||||||||||||||    
T  35175652 atgatgtattctatcaatttgaatgaatgaatatcgttt 35175690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 3457351 - 3457400
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 165  Q
    ||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  3457351 tactctatcaatttaaatgaatgaatatcgtttatttttataaaaaaaaa 3457400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 166
Target Start/End: Complemental strand, 31271747 - 31271614
Alignment:
Q  34 ttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgtatatgatatactctatcgatttaaat 133  Q
    |||||||||| || ||||||  ||| ||||| ||| ||   ||||||||||||||| |||||| | || | ||||| |||| | ||||||| ||||||||    
T  31271747 ttgttgtatgctaataacttaggtgttgtgagtttgtttgcagattcaccctttacgtttttagcgatatttgtatctgatgttctctatcaatttaaat 31271648  T
Q  134 gaatgaatatcg-tttatttttatgagaaaaaat 166  Q
    |||||||||| | ||||||||||| | |||||||    
T  31271647 gaatgaatattgttttatttttatcaaaaaaaat 31271614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 36910640 - 36910567
Alignment:
Q  75 agattcaccctttacatttttatcaatgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||||||||||||| |||||  | |||| | ||| |||| |||||||||||||| ||||||||||||||||||    
T  36910640 agattcaccctttacgttttttgcgatgtttatatctgatgtactctatcgatttgaatgaatgaatatcgttt 36910567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19339315 - 19339367
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| |||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  19339315 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaactt 19339367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23799858 - 23799806
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| ||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  23799858 ttagattttatcatattatttgtaggcattttgccgttgtatgttattaactt 23799806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26739305 - 26739253
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| ||||||||||||||||||||||||||||  |||||||| |||||||||    
T  26739305 ttagattttatcatattatttgtaagcattttggcgttgtatgctattaactt 26739253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 32701635 - 32701759
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    ||||||| ||||||| |||| ||||||||  |||||||| ||| |||||   |||||||| ||| |||  ||||||||| |||| ||||||| | ||||     
T  32701635 gttttatgatattatctgtaggcattttgccgttgtatgctatgaacttggatgctgtgagtttgttcgcagattcaccttttatatttttagcgatgtt 32701734  T
Q  105 tgtatatgatatactctatcgattt 129  Q
    ||||| |||| || |||||||||||    
T  32701735 tgtatctgatgtattctatcgattt 32701759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 38142672 - 38142760
Alignment:
Q  8 ttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    ||||||||||||||||| ||||||| |||||||||  |||||||||   |||||||| ||| ||   | ||||||||||||||||||||    
T  38142672 ttatcatattatttgtaggcattttattgttgtatactattaacttgaatgctgtgagtttgtttgcatattcaccctttacattttta 38142760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38860060 - 38860008
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||||||||||||| ||||||||  |||||||| |||||||||    
T  38860060 ttaggttttatcatattatttgtaggcattttgccgttgtatgctattaactt 38860008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 27706174 - 27706079
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||| ||||||||||||||| ||||||||| |||||||| |||||||||  ||||||| | ||| |||  |||||| |||| ||| ||||||    
T  27706174 ttagatttcatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgttagtttgttcccagattcgccctatacgttttta 27706079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 53807798 - 53807711
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||| ||||||| ||||||    
T  53807798 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtggtgtgagtttgttcgcagattcatcctttacgttttta 53807711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 26275762 - 26275632
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    ||||||||||||||||||| |||||||||  ||||||| |||||||||| | ||| | | ||| |||  | ||||||| |||| ||||||| |  ||| |    
T  26275762 ttttatcatattatttgtaggcattttgtcattgtatgctattaactttggcgctttaagtttattcgcaaattcaccatttatatttttaacgttgttt 26275663  T
Q  106 gtatatgatatactctatcgatttaaatgaa 136  Q
    |||| | ||||||||  || |||||||||||    
T  26275662 gtatctaatatactcattcaatttaaatgaa 26275632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 53155130 - 53155092
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  53155130 tactctatcaatttaaatgaatgaatatcgtttattttt 53155092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 2192507 - 2192556
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 165  Q
    ||||||||| |||| |||||||||||||||||||||||||| | ||||||    
T  2192507 tactctatcaatttgaatgaatgaatatcgtttatttttatcaaaaaaaa 2192556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 7546755 - 7546840
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctt 86  Q
    |||| ||| ||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||   ||||||||||||    
T  7546755 ttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctt 7546840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 44984568 - 44984527
Alignment:
Q  113 atatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  44984568 atatactctatcaatttaaatgaatggatatcgtttattttt 44984527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 45664629 - 45664678
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 165  Q
    ||||||||| ||||||||||||||||||| ||||||||||| | ||||||    
T  45664629 tactctatcaatttaaatgaatgaatatcatttatttttatcaaaaaaaa 45664678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 154
Target Start/End: Complemental strand, 46732451 - 46732414
Alignment:
Q  117 actctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||||||| |||||||||||||||||||||||||||||    
T  46732451 actctatcaatttaaatgaatgaatatcgtttattttt 46732414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 55090399 - 55090350
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 165  Q
    ||||||||| |||| |||||||||||||||||||||||| ||| ||||||    
T  55090399 tactctatcaatttgaatgaatgaatatcgtttatttttgtgaaaaaaaa 55090350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9173888 - 9173940
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| ||| ||||||||||||||| ||||||||  ||||||||||||||||||    
T  9173888 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 9173940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20987703 - 20987651
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| ||||||||||||||||||| ||||||||  |||||||| |||||||||    
T  20987703 ttagattttatcatattatttgtaggcattttgcagttgtatgctattaactt 20987651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 36691499 - 36691459
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  36691499 tactttatcgatttgaatgaatgaatatcgtttatttttat 36691459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 37452121 - 37452165
Alignment:
Q  121 tatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 165  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||    
T  37452121 tatcaatttaaatgaatgaatatcgtttatttttatcaaaaaaaa 37452165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 51060084 - 51060124
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    |||||||||||||||||||||| || |||||||||||||||    
T  51060084 tactctatcgatttaaatgaataaacatcgtttatttttat 51060124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 52115961 - 52115917
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||    
T  52115961 tatcatattatttgtagtcattttgttgttatatgttattaactt 52115917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 53099930 - 53099981
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| ||||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  53099930 ttagattttagcatattatttgta-gcattttgtcgttgtatgttattaactt 53099981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 628863 - 628776
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||||||||||||||| ||||||||  |||||||  |||||||||  ||| ||||| ||| |||  ||||||| ||||||| ||||||    
T  628863 tatcatattatttgtaggcattttgccgttgtattctattaacttgggtgttgtgagtttgttcgcagattcatcctttacgttttta 628776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 8914852 - 8914947
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||| ||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||| | ||| ||||||    
T  8914852 ttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgagtgatgtgagtttgttcgcagattcaccttatacgttttta 8914947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 154
Target Start/End: Original strand, 14585886 - 14585929
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||    
T  14585886 tgatgtactctatcaatttgaatgaatgaatatcgtttattttt 14585929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19619853 - 19619904
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaact 52  Q
    |||| ||||||||||||||||||| ||||||||  |||||||| ||||||||    
T  19619853 ttagattttatcatattatttgtaggcattttgccgttgtatgctattaact 19619904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 154
Target Start/End: Original strand, 19645614 - 19645657
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||    
T  19645614 tgatgtactctatcaatttgaatgaatgaatatcgtttattttt 19645657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 144
Target Start/End: Complemental strand, 20464913 - 20464770
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    ||||||||||||||||||  ||||||||| || ||||| ||||||||| |||| | ||| ||| |||  |||||  | |||||| |||||| | |||| |    
T  20464913 ttttatcatattatttgtgtgcattttgtcgtcgtatgctattaacttgtgtgatatgagtttgttcgcagatttgctctttacgtttttagcgatgttt 20464814  T
Q  106 gt-----atatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||     || |||| ||||||||| |||| ||||||||||||||    
T  20464813 gtatctgatctgatgtactctatcaatttgaatgaatgaatatc 20464770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 45047922 - 45047977
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaata 167  Q
    ||||||||||||| |||| |||||||||||||| ||||||||| | | ||||||||    
T  45047922 gatatactctatcaatttgaatgaatgaatatcatttatttttgtcaaaaaaaata 45047977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 50981171 - 50981128
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||    
T  50981171 tgatgtactctatcaatttgaatgaatgaatatcgtttattttt 50981128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 51084305 - 51084262
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||    
T  51084305 tgatgtactctatcaatttgaatgaatgaatatcgtttattttt 51084262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 51303591 - 51303496
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||| ||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||| | ||| ||||||    
T  51303591 ttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccatatacgttttta 51303496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 11819513 - 11819551
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  11819513 tactctatcaatttgaatgaatgaatatcgtttattttt 11819551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 13701702 - 13701664
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  13701702 tactctatcaatttgaatgaatgaatatcgtttattttt 13701664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 24483396 - 24483358
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  24483396 tactctatcaatttgaatgaatgaatatcgtttattttt 24483358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 34960626 - 34960580
Alignment:
Q  119 tctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 165  Q
    |||||| |||| |||||||||||||||||||||||||| | ||||||    
T  34960626 tctatcaatttgaatgaatgaatatcgtttatttttataaaaaaaaa 34960580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 40012976 - 40012934
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||    
T  40012976 gatatactctatcaatttgaatgaataaatatcgtttattttt 40012934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 42106562 - 42106608
Alignment:
Q  126 atttaaatgaatgaatatcgtttatttttatgagaaaaaatatatat 172  Q
    |||| |||||||||||||| ||||||||||| | |||||||||||||    
T  42106562 atttgaatgaatgaatatcatttatttttatcaaaaaaaatatatat 42106608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 48401521 - 48401559
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  48401521 tactctatcaatttgaatgaatgaatatcgtttattttt 48401559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 49627804 - 49627766
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  49627804 tactctatcaatttgaatgaatgaatatcgtttattttt 49627766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 54706432 - 54706394
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  54706432 tactctatcaatttgaatgaatgaatatcgtttattttt 54706394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 55455291 - 55455329
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  55455291 tactctatcaatttgaatgaatgaatatcgtttattttt 55455329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 1074594 - 1074557
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttt 153  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  1074594 tactctatcaatttgaatgaatgaatatcgtttatttt 1074557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 26716050 - 26716014
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtat 42  Q
    ||||||||||||||||||||||||||| | |||||||    
T  26716050 ttttatcatattatttgtaagcattttttcgttgtat 26716014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29922197 - 29922249
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| |||||||||||| |||||| ||||||||  |||||||| |||||||||    
T  29922197 ttagattttatcatattgtttgtaggcattttgccgttgtatgctattaactt 29922249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29971350 - 29971402
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| |||||||||||| |||||| ||||||||  |||||||| |||||||||    
T  29971350 ttagattttatcatattgtttgtaggcattttgccgttgtatgctattaactt 29971402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 154
Target Start/End: Original strand, 31550349 - 31550377
Alignment:
Q  126 atttaaatgaatgaatatcgtttattttt 154  Q
    |||||||||||||||||||||||||||||    
T  31550349 atttaaatgaatgaatatcgtttattttt 31550377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 33637823 - 33637879
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatatat 172  Q
    |||| |||| |||| |||||||||||||||||||||||| | | |||||| ||||||    
T  33637823 tactttatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaaaaaatatat 33637879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44805169 - 44805221
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| |||||||||||| |||||| |||||||||  ||||||| |||||||||    
T  44805169 ttagattttatcatattgtttgtaggcattttgtcattgtatgctattaactt 44805221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 51923867 - 51923919
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| ||| ||||||||||||||| ||||||||  |||||||| |||||||||    
T  51923867 ttagatttcatcatattatttgtaggcattttgccgttgtatgctattaactt 51923919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 17949272 - 17949124
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacat-ttttatca 99  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||  ||| ||||| ||| |||  ||||||||||||||||| ||||| |     
T  17949272 ttaggttttatcatattatatgtatgcattttgttcttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttacattttttagcg 17949173  T
Q  100 atgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  17949172 atgtttgtatctgatatactctatcgatttgaatgaatgaatatcgttt 17949124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 17953124 - 17952976
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacat-ttttatca 99  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||  ||| ||||| ||| |||  ||||||||||||||||| ||||| |     
T  17953124 ttaggttttatcatattatatgtatgcattttgttcttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttacattttttagcg 17953025  T
Q  100 atgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  17953024 atgtttgtatctgatatactctatcgatttgaatgaatgaatatcgttt 17952976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 56040594 - 56040447
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||| |||||||| |||||||||   |||||||| |||  ||  ||||||||||||||| |||||| | |    
T  56040594 ttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttggatgctgtgagtttgctcgcagattcaccctttacgtttttagcga 56040495  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  56040494 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 56040447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 21686190 - 21686043
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  | ||||||||||||||||  ||||||||| ||| |||  | ||||||||||||| ||| || | |    
T  21686190 ttaggttttatcatattatttgtaggcattttgccgctgtatgttattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttgtagcga 21686091  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  21686090 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 21686043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 43510361 - 43510504
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||||||  ||||||||| ||| |||  ||||||||||||||| |||||| | || |     
T  43510361 gttttatcatattatttgtaggcattttgtcgttgtatgtcattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgatatt 43510460  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||| ||||||||| ||||||||||||||||||    
T  43510461 tgtatttgatgtactttatcgatttgaatgaatgaatatcgttt 43510504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 19853456 - 19853313
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    ||||||||||||||||| || ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | ||||     
T  19853456 gttttatcatattatttctaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttaacgatgtt 19853357  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  19853356 tgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 19853313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 32766679 - 32766822
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||| ||| |||||||| |||||||||  ||||||||| ||| |||  ||||||||||||| | |||||| | ||||     
T  32766679 gttttatcatattatttgtaggcattatgtcgttgtatgctattaacttgggtgctgtgagtttgttctcagattcaccctttgcgtttttagcgatgtt 32766778  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||| ||||||||||||| ||||    
T  32766779 tgtatctgatgtactctatcgatttgaatgaatgaatattgttt 32766822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 154
Target Start/End: Complemental strand, 48257576 - 48257427
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| | ||||||  |||||||| |||||||||   |  ||||| ||| |||  ||||||||||||||| |||||| | ||||     
T  48257576 gttttatcatattatttgtaggtattttgccgttgtatgctattaacttggattttgtgagtttgttcgcagattcaccctttacgtttttaacgatgtt 48257477  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  48257476 tgtatctgatgtactctatcgatttgaatgaatgaatatcgtttattttt 48257427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 2520940 - 2521087
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||| ||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | |    
T  2520940 ttagattttatcgtattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcga 2521039  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| ||||  ||||||||||||| ||||||||||||||||||    
T  2521040 tgtttgtatctgatggactctatcgatttgaatgaatgaatatcgttt 2521087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 24099015 - 24098871
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  |||| ||| |||||||||  ||||||||| ||| |||  |||| ||| |||||| |||||| |||    
T  24099015 ttaggttttatcatattatttgtaggcattttgccgttg-atgctattaacttg-gtgctgtgagtttgttcgcagatccactctttacgtttttagcaa 24098918  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgtt 147  Q
    ||| ||||| |||| |||||||||||||| |||||||||||||||||    
T  24098917 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtt 24098871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 10496496 - 10496644
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttt-acatttttatca 99  Q
    |||||||||||||||||||||||| |||||||| ||| ||||| |||||||||  ||||| ||| ||| |||  ||||||| ||||| || |||||| |     
T  10496496 ttaggttttatcatattatttgtaggcattttgctgtcgtatgctattaacttgggtgctttgagtttgttcgcagattcatcctttaacgtttttagcg 10496595  T
Q  100 atgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    || | ||||| |||||||||||||| |||| ||||||||||||||||||    
T  10496596 atatttgtatttgatatactctatcaatttgaatgaatgaatatcgttt 10496644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 13634276 - 13634419
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||| |||||||||||   ||||||  |||||||| |||||||||  ||||||||| ||| |||  |||||||||||||||  ||||| | |    
T  13634276 ttaggttttatcttattatttgtagttattttgccgttgtatgctattaacttgggtgctgtgaatttgttcggagattcaccctttacgcttttagcga 13634375  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||| ||||| |||| |||||||||||||| ||||||||||||||    
T  13634376 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatc 13634419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 4142656 - 4142565
Alignment:
Q  57 tgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||||||| ||| |||  |||||||||||||||||||||| |||||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  4142656 tgctgtgagtttgttcgcagattcaccctttacatttttagcaatgtttgtatttgatgtactctatcgatttgaatgaatgaatatcgttt 4142565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 10258844 - 10258709
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||||||||||||||||  ||||||| |||||||||     |||||| ||| ||||| ||| |||||||||| | ||||||| |||||| |||    
T  10258844 ttagattttatcatattatttgtagacattttgctgttgtatg-----aactttagtgttgtgagtttgttcatagatttatcctttacgtttttagcaa 10258750  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaat 141  Q
    ||| ||||| |||| ||||||||| |||| |||||||||||    
T  10258749 tgtttgtatctgatgtactctatcaatttgaatgaatgaat 10258709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 22611348 - 22611498
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatc------ 98  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||| ||  ||||||||| ||| |||  ||||||||||||||| |||||| |          
T  22611348 gttttatcatattatttgtaggcattttgccgttgtatggtattaaattgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgtttaa 22611447  T
Q  99 -aatgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
      |||| ||||| |||| |||||||||||||||||||||| ||||||||||    
T  22611448 tgatgtttgtatctgatgtactctatcgatttaaatgaataaatatcgttt 22611498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 22806704 - 22806784
Alignment:
Q  8 ttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   |||| ||| ||| ||| ||||||||| |||||    
T  22806704 ttatcatattatttgtaagcattttgttgttgtatgttattaacttggatgctatgaatttgttcgtagattcactcttta 22806784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 26633619 - 26633472
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||||||||||||||||  | || |||||||   |||||||| ||||| |||   || ||||| ||| |||  ||||||||||||||| ||||||   |    
T  26633619 ttaggttttatcatattaaatataggcattttaccgttgtatgctattagcttagatgttgtgagtttgttcgcagattcaccctttacgtttttagtga 26633520  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  26633519 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 26633472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 43853604 - 43853699
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||   || ||||| ||| |||  ||||| ||| ||||||||||||    
T  43853604 ttagattttatcatattatttgtcagcattttgttgttgtatgttattaacttggatgttgtgagtttgttcgcagattaaccatttacattttta 43853699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 53811193 - 53811326
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| |||||  || |||  ||||||||||||||| |||||| | |||||    
T  53811193 gttttatcatattatttgtaggcattttggcgttgtatgctattaacttgggtgttgtga-gttgttcgcagattcaccctttacgtttttagcgatgta 53811291  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||         |||||||||||||||||||||||||||||||||    
T  53811292 tg---------tactctatcgatttaaatgaatgaatatcgttt 53811326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 35348468 - 35348617
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||   || |||| |||||||||  ||| ||||| ||| ||   ||||||||||||||| |||||| | |    
T  35348468 ttaggttttatcatattatttgtaggcattttgccattttatgctattaacttgggtgttgtgagtttgtttgcagattcaccctttacgtttttagcga 35348567  T
Q  101 tgtatgtatatgatatactc--tatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||  |||||||||   ||||||||||||||||    
T  35348568 tgtttgtatctgatgtactctttatcgatttggttgaatgaatatcgttt 35348617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 29960897 - 29960757
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||||||| |||||||| ||||||||  |||||||| | |||||||  ||||||||| ||| |||  ||||||||| ||||  |||||| | |    
T  29960897 ttagattttatcatactatttgtaggcattttgccgttgtatgcttttaacttgggtgctgtgagtttgttcgcagattcaccttttatgtttttagcga 29960798  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaat 141  Q
    | | ||||| | |||||||| |||||||| |||||||||||    
T  29960797 tatttgtatctaatatactccatcgatttgaatgaatgaat 29960757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 21662598 - 21662745
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||||||||||||||||||||||  || |||| ||||||||| |||||||||  ||| |||||  || |||  || |||||| ||||  |||||| | |    
T  21662598 ttaggttttatcatattatttgtagacactttggtgttgtatgctattaacttgagtgttgtgaggttgttcgcagtttcaccatttatgtttttagcga 21662697  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||  ||| ||||||| ||||||||||    
T  21662698 tgtttgtatttgatgtactctatcactttgaatgaataaatatcgttt 21662745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 21671362 - 21671509
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||||||||||||||||||||||  || |||| ||||||||| |||||||||  ||| |||||  || |||  || |||||| ||||  |||||| | |    
T  21671362 ttaggttttatcatattatttgtagacactttggtgttgtatgctattaacttgagtgttgtgaggttgttcgcagtttcaccatttatgtttttagcga 21671461  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||  ||| ||||||| ||||||||||    
T  21671462 tgtttgtatttgatgtactctatcactttgaatgaataaatatcgttt 21671509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 36161872 - 36161967
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||||||||||||||||||| |||||| || ||| ||||||||||||||  ||| ||||| ||| |||| |||||||| |||||| ||||||    
T  36161872 ttagattttatcatattatttgtaggcatttggtcgttatatgttattaacttgggtgttgtgagtttgttcacagattcactctttacgttttta 36161967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 9178517 - 9178601
Alignment:
Q  4 ggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 88  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||| ||||  |||| ||| |||  || |||||||||||    
T  9178517 ggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgtgtgacgtgagtttgttcgcagtttcacccttta 9178601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37465643 - 37465695
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| ||||||||||||||||||||||||||||| |||||||| |||||||||    
T  37465643 ttagattttatcatattatttgtaagcattttgtcgttgtatgctattaactt 37465695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9714071 - 9714166
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||||||||||||||||||| |||||||||  ||||||||| |||||||  ||| ||||| ||| |||  || |||||||||||| ||||||    
T  9714071 ttagattttatcatattatttgtaggcattttgtcattgtatgttgttaacttgagtgttgtgagtttgttcgcaggttcaccctttacgttttta 9714166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 53444279 - 53444422
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||||||||||||||||||||||   |||||   ||| |||| |||||||||  ||||||||| ||| ||| |||||||||| ||||| |||||| | |    
T  53444279 ttaggttttatcatattatttgtagatatttttccgttttatgctattaacttgggtgctgtgagtttgttcgtagattcaccttttacgtttttagcga 53444378  T
Q  101 tg-tatgtatatgatatactctatcgatttaaatgaatgaatat 143  Q
    || | ||||| | || || |||||| |||| |||||||||||||    
T  53444379 tgttttgtatctaatgtaatctatctatttgaatgaatgaatat 53444422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 47320352 - 47320219
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgta 108  Q
    |||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| |||  |||||||  |||||| |||||| | || | ||      
T  47320352 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcattctttacgtttttagcgatct-tgat 47320254  T
Q  109 tatgatatactctatcgatttaaatgaatgaatat 143  Q
    | |||| || ||||||||||| |||||||||||||    
T  47320253 tctgatgtattctatcgatttgaatgaatgaatat 47320219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29120327 - 29120276
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaact 52  Q
    |||| ||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  29120327 ttagattttatcatattatttgtaggcattttgtcgttgtatgctattaact 29120276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 52933897 - 52933802
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||||||||||||||||||| | |||||| | |||||||||||||||||  ||| ||||| ||| | |  ||||| || |||||||||||||    
T  52933897 ttagattttatcatattatttgtaggtattttgcttttgtatgttattaacttgagtgatgtgagtttgtgcgcagatttacgctttacattttta 52933802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 477713 - 477675
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  477713 tactctatcgatttgaatgaatgaatatcgtttattttt 477675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 11299954 - 11299864
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttt 95  Q
    |||||||||||||||| ||| ||||||||  ||| ||||||||||||||  ||| ||||| ||| |||  ||||||| ||||||| |||||    
T  11299954 gttttatcatattattcgtaggcattttggcgttttatgttattaacttgggtgttgtgagtttgttcgcagattcatcctttacgttttt 11299864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 18502534 - 18502496
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  18502534 tactctatcaatttaaatgaatgaatatcgtttattttt 18502496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 19745815 - 19745857
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  19745815 gatatactctatcaatttaaatgattgaatatcgtttattttt 19745857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 19793991 - 19793949
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  19793991 gatatactctatcaatttaaatgattgaatatcgtttattttt 19793949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 20887449 - 20887411
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  20887449 tactctatcaatttaaatgaatgaatatcgtttattttt 20887411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 151
Target Start/End: Original strand, 39797380 - 39797418
Alignment:
Q  113 atatactctatcgatttaaatgaatgaatatcgtttatt 151  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  39797380 atatactctatcaatttaaatgaatgaatatcgtttatt 39797418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45418673 - 45418723
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaac 51  Q
    |||| ||||||||||||||||||| ||||||||| |||||||| |||||||    
T  45418673 ttagattttatcatattatttgtaggcattttgtcgttgtatgctattaac 45418723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 7060743 - 7060792
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 165  Q
    ||||||||| |||| |||||||||||||||||||||||||| | ||||||    
T  7060743 tactctatcaatttgaatgaatgaatatcgtttatttttatcaaaaaaaa 7060792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 6155163 - 6155119
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||    
T  6155163 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 6155119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22305569 - 22305517
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| ||||||||||||||||||| | ||||||| |||||||| |||||||||    
T  22305569 ttagattttatcatattatttgtaggtattttgtcgttgtatgctattaactt 22305517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 43095904 - 43095959
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcg-tttatttttatgagaaaaaa 165  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||| | ||||||    
T  43095904 tgatatactctatcaatttgaatgaatgaatatcgttttatttttataaaaaaaaa 43095959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 52978905 - 52979052
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||| ||||||||||||   |||||||  |||||| ||||||||||   || ||||| |||| ||  |||||||||||||   |||||| |||    
T  52978905 ttagattttattatattatttgtagttattttgtcattgtattttattaacttggatggtgtgagttttgtcgcagattcaccctttttgtttttaacaa 52979004  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| | ||| |||| ||||  ||| |||| |||||| |||||||||||    
T  52979005 tgtttatatctgatgtactagatcaatttgaatgaaagaatatcgttt 52979052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 7084371 - 7084409
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  7084371 tactctatcaatttgaatgaatgaatatcgtttattttt 7084409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 8517151 - 8517113
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  8517151 tactctatcaatttgaatgaatgaatatcgtttattttt 8517113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 12493459 - 12493541
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 88  Q
    |||| ||||||||||||||  ||||||||| || |||| |||||||||  ||||||||| ||| ||| || ||||| ||||||    
T  12493459 ttttctcatattatttgtagccattttgttattatatgctattaacttgcgtgctgtgagtttgttcgtatattcatccttta 12493541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 13965972 - 13966010
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  13965972 tactctatcaatttgaatgaatgaatatcgtttattttt 13966010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 14346839 - 14346877
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  14346839 tactctatcaatttgaatgaatgaatatcgtttattttt 14346877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 24826068 - 24826106
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  24826068 tactctatcaatttgaatgaatgaatatcgtttattttt 24826106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 26090853 - 26090735
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    ||||||||||||||||| |   || |||| |||||||| |||||| ||   |||||||| ||| || | ||||||| ||||||| |||||| |  ||| |    
T  26090853 ttttatcatattatttgcagatatattgtcgttgtatgctattaatttggatgctgtgaatttgtttacagattcatcctttacgtttttagcgttgttt 26090754  T
Q  106 gtatatgatatactctatc 124  Q
    |||| ||||||||||||||    
T  26090753 gtatctgatatactctatc 26090735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 30416333 - 30416295
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  30416333 tactctatcaatttaaatgaatgaatatcatttattttt 30416295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 37431581 - 37431623
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||    
T  37431581 gatatactctatcaatttaaaagaaagaatatcgtttattttt 37431623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 38435006 - 38435044
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  38435006 tactctatcaatttgaatgaatgaatatcgtttattttt 38435044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 39838018 - 39838060
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttatttt 153  Q
    |||||||||||| | |||| |||||||||||||||||||||||    
T  39838018 tgatatactctaacaatttgaatgaatgaatatcgtttatttt 39838060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 42197982 - 42198020
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  42197982 tactctatcaatttgaatgaatgaatatcgtttattttt 42198020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 43244073 - 43244035
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  43244073 tactctatcaatttgaatgaatgaatatcgtttattttt 43244035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 44596826 - 44596967
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    |||||||||||||||||||   |||||   |||||||| |||||||||  ||||||||| ||| |||  ||||||  |||||| ||||||    |||| |    
T  44596826 ttttatcatattatttgtagctattttaccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattc-gcctttatattttttgtgatgttt 44596924  T
Q  106 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||| |||| ||||||||| |||| ||| ||||||||| ||||    
T  44596925 gtatttgatgtactctatcaatttgaattaatgaatattgttt 44596967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 45350762 - 45350724
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  45350762 tactctatcaatttgaatgaatgaatatcgtttattttt 45350724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 45360241 - 45360203
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  45360241 tactctatcaatttgaatgaatgaatatcgtttattttt 45360203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 46268094 - 46268132
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  46268094 tactctatcaatttaaatgaataaatatcgtttattttt 46268132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 46990953 - 46990908
Alignment:
Q  110 atgatatactctatcgatttaaatgaatgaatatcgtttattttta 155  Q
    ||||| |||||||||||||| |||||||||||||| ||| ||||||    
T  46990953 atgatgtactctatcgatttgaatgaatgaatatcattttttttta 46990908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 54022021 - 54022165
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||||||||||||||||  || ||||| ||||||||||||||||||   || | ||| ||| ||| ||||||||   ||||| |||||| | |    
T  54022021 ttagattttatcatattatttgtagaca-tttgtcgttgtatgttattaacttgaatgttatgaatttgttcgtagattcattatttacgtttttagcga 54022119  T
Q  101 tgtatgt-----atatgatatactctatcgatttaaatgaatgaat 141  Q
    ||| |||     || |||| ||||||||| ||||||||||||||||    
T  54022120 tgtttgtatctgatttgatgtactctatcaatttaaatgaatgaat 54022165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 154
Target Start/End: Complemental strand, 55600237 - 55600200
Alignment:
Q  117 actctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  55600237 actctatcaatttgaatgaatgaatatcgtttattttt 55600200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 7008932 - 7008852
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctt 86  Q
    ||||||||||||||||||   |||||||  |||||||| |||||||||  ||| ||||| ||  ||| |||||||||||||    
T  7008932 ttttatcatattatttgtggacattttgccgttgtatgctattaacttaggtgttgtgagttcgttcgtagattcaccctt 7008852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 9048830 - 9048918
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttt 94  Q
    ||||||||||||||||||| ||||||||| ||  | || ||| |||||  ||| ||||| ||| || | ||||||||||||||| ||||    
T  9048830 ttttatcatattatttgtaggcattttgtcgtcatgtgctataaacttgggtgttgtgagtttgtttacagattcaccctttacgtttt 9048918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 11210010 - 11209950
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatata 171  Q
    |||| ||||||||| |||| |||||||||||||| ||||||||| | | |||||| |||||    
T  11210010 tgatgtactctatcaatttgaatgaatgaatatcttttatttttgtaaaaaaaaagatata 11209950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 18935943 - 18936027
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccct 85  Q
    |||| ||| ||||||||||||||| |||||||| | ||||| |||||||||||  ||| ||||| ||| ||   |||||||||||    
T  18935943 ttagatttcatcatattatttgtaggcattttgctattgtacgttattaacttgggtgttgtgagtttgtttgcagattcaccct 18936027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 31522375 - 31522411
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattt 152  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  31522375 tactctatcaatttgaatgaatgaatatcgtttattt 31522411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33921215 - 33921267
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| ||||||||||||||||||| ||||| | | |||||||| |||||||||    
T  33921215 ttagattttatcatattatttgtaggcattgtatagttgtatgctattaactt 33921267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 36124048 - 36123996
Alignment:
Q  117 actctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatata 169  Q
    |||||||| |||| || ||||||||||||||||||||| | | ||||||||||    
T  36124048 actctatcaatttgaaagaatgaatatcgtttatttttgttaaaaaaaatata 36123996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36194869 - 36194921
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| ||| ||||||||||||||| ||||||||  |||||||| |||||||||    
T  36194869 ttagatttcatcatattatttgtaggcattttgccgttgtatgctattaactt 36194921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 38445321 - 38445464
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||   |||||||||||||||||| ||||||||| ||| |||  ||||||| ||||||| |||||| ||||||     
T  38445321 gttttatcatattatttgtaggcattttgccattgtatgttattaactttggtgctgtgagtttgttcgcagattcatcctttacgtttttaacaatgtt 38445420  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  38445421 tgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 38445464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 5427818 - 5427671
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||| ||||||||| | |||||||| |||||||||  ||||||||| ||| |||  |||||||||||||||  ||||| | |    
T  5427818 ttaggttttatcatattatttgcaagcattttatcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgcttttagcga 5427719  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  5427718 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 5427671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 4778908 - 4779051
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||| ||  ||||||||| ||| |||  ||||||||||||||| |||||| | ||||     
T  4778908 gttttatcatattatttgtaggcattttgccgttgtatgttattaatttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 4779007  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||| ||||||||||||| ||||    
T  4779008 tgtatttgatgtactctatcgatttgaatgaatgaatatagttt 4779051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 31788607 - 31788754
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||| ||||||||||||| ||||||||  |||||||| |||||||||   |||||||| ||| |||  ||||||||||||||| |||||| | |    
T  31788607 ttaggttttaacatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagattcaccctttacgtttttagcga 31788706  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  31788707 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 31788754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 4904094 - 4903947
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||||||||||||||||  |||||||| |||||||| |||||||||   || ||||| ||| ||| |||||||| ||||||| |||||| |||    
T  4904094 ttagattttatcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgtgagtttgttcgtagattcagcctttacgtttttagcaa 4903995  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    | | | ||| |||| ||||||||| |||||||||||||||||||||||    
T  4903994 tatttatatttgatgtactctatcaatttaaatgaatgaatatcgttt 4903947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 18763619 - 18763766
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | |    
T  18763619 ttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcga 18763718  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    | | ||||| |||| |||||||| ||||| ||||||||||||||||||    
T  18763719 tatttgtatctgatgtactctattgatttgaatgaatgaatatcgttt 18763766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 36692025 - 36692172
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  ||| |||| |||||||||   || ||||| ||| |||| ||||||||||||||| || ||| | |    
T  36692025 ttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttggttgttgtgagtttgttcacagattcaccctttacgttcttagcga 36692124  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||||||| |||||||| |||||||||    
T  36692125 tgtttgtatctgatgtactctatcgatttgaatgaatgtatatcgttt 36692172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 11985182 - 11985029
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||||||  |||||||||   || ||||| ||| |||  | ||||| | ||||| |||||| | |    
T  11985182 ttaggttttatcatattatttgtaggcattttgctgttgtatcctattaacttggatgttgtgaatttgttcgcaaattcatcatttacgtttttagcga 11985083  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||| ||||| |||| |||||||||||||| |||||||||||||||||| |||||    
T  11985082 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttttttt 11985029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 1421827 - 1421979
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| ||   ||||||| ||||||| ||||||   |    
T  1421827 ttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgtttgcagattca-cctttacgtttttagtga 1421925  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||| ||||| |||| |||| ||||||||| |||||||||||||| ||| |||||    
T  1421926 tgtttgtatctgatgtactttatcgatttgaatgaatgaatatcattttttttt 1421979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 4041543 - 4041400
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||| ||||||||||||||||||  ||||||| ||||| ||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | |    
T  4041543 ttaggctttatcatattatttgtagccattttgctgttgcatgctattaacttaggtgttgtgagtttgttcgcagattcaccctttacgtttttaacga 4041444  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    | | ||||| |||| ||| |||||||||| ||||||||||||||    
T  4041443 tttttgtatctgatgtacactatcgatttgaatgaatgaatatc 4041400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 7646633 - 7646776
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||| ||||| |||||| | || |     
T  7646633 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccttttacgtttttagcgatctt 7646732  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    | ||| |||| |||| ||||||||| ||||||||||||||||||    
T  7646733 tatatttgatgtactttatcgatttgaatgaatgaatatcgttt 7646776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 25509017 - 25508870
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||| ||||||||||| ||||||||  ||||||||||||||||||  ||| ||||| ||| |||  ||||||| | ||||  |||||| | |    
T  25509017 ttagattttatcgtattatttgtaggcattttgccgttgtatgttattaacttgggtgatgtgagtttgttcgcagattcatcgtttatgtttttaccga 25508918  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| |||||||||| ||||||||| |||| ||||||| ||||||||||    
T  25508917 tgtttgtatatgatgtactctatcaatttgaatgaataaatatcgttt 25508870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 33585680 - 33585537
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  | ||||| ||||||| |||||| | ||||     
T  33585680 gttttatcatattatttgtatgcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatcctttacgtttttaacgatgtt 33585581  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||| ||||| |||||| |||||||||||    
T  33585580 tgtatctgatgtactctattgatttgaatgaaagaatatcgttt 33585537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 33923856 - 33924003
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||| | || |||||| ||| |||| |||||||||  ||||||||| ||| |||  | ||||||| ||||| |||||| | |    
T  33923856 ttaggttttatcatattatttgcaggcgttttgtcgttttatgctattaacttgggtgctgtgagtttgttcgcatattcaccttttacctttttagcga 33923955  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    | | ||||| |||| || ||||||||||| ||||||||||||||||||    
T  33923956 tttttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttt 33924003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 29173653 - 29173523
Alignment:
Q  14 tattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgtatatga 113  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| ||||| ||| |||  ||||||| ||||||| |||||| | |||| ||||| |||    
T  29173653 tattatttgtatgcattttgttgttgtatgttattaactttggtgttgtgagtttgttcgcagattcatcctttacgtttttagcgatgtttgtatctga 29173554  T
Q  114 tatactctatcgatttaaatgaatgaatatc 144  Q
    | || || ||| |||| ||||||| ||||||    
T  29173553 tgtaatcaatcaatttgaatgaataaatatc 29173523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 7677822 - 7677675
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||||||||||||||||||| || ||||||||  |||||||| |||||||||  ||||||||| ||| ||   |  |||||| ||||| |||||| | |    
T  7677822 ttaggttttatcatattatttttaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcaagttcaccttttacgtttttagcga 7677723  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| | ||| |||||||||||||| |||||||  ||||||||||||||    
T  7677722 tgtttatatctgatatactctatcaatttaaaaaaatgaatatcgttt 7677675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 35220495 - 35220626
Alignment:
Q  17 tatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgtatatgatat 116  Q
    |||||||| ||||||||| |||||||| |||||||||  ||||||||| ||| |||  | ||||||||||||| |||||| | || | ||||| |||| |    
T  35220495 tatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttagcgatctttgtatctgatgt 35220594  T
Q  117 actctatcgatttaaatgaatgaatatcgttt 148  Q
    |||||||| |||| ||||||||||| ||||||    
T  35220595 actctatcaatttgaatgaatgaatgtcgttt 35220626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12554130 - 12554036
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttt 95  Q
    |||||||||||||||||||||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||    
T  12554130 ttaggttttatcatattatttgtaggcattttgtcgttgtatgatattaacttgggtgttgtgagtttgttcgcagattcaccctttacgttttt 12554036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 37876550 - 37876408
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    ||||||||||||||||||| ||||||||  || ||||| |||||||||  ||| || || ||| |||  ||||||||| ||||  |||||| | |||| |    
T  37876550 ttttatcatattatttgtaggcattttgccgtcgtatgctattaacttgggtgatgcgagtttgttcgcagattcaccatttatgtttttagcgatgttt 37876451  T
Q  106 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||| |||| ||||||||| |||| ||||||||||||||||||    
T  37876450 gtatttgatgtactctatcaatttgaatgaatgaatatcgttt 37876408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 4100491 - 4100628
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||| || ||| ||||| ||| |||  ||||||||||||||| |||||| | ||||     
T  4100491 gttttatcatattatttgtaggcattttgccgttgtatgatattaac-ttggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 4100589  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||     || || ||||||||||| ||||||||||||||||||    
T  4100590 tgt-----atgtaatctatcgatttgaatgaatgaatatcgttt 4100628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 19062279 - 19062150
Alignment:
Q  18 atttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgtatatgatata 117  Q
    ||||||| ||||||||  |||||||| |||||||||  ||| ||||| |||  ||  ||||||||||||||| |||||| || ||| ||||| | |||||    
T  19062279 atttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgctcgcagattcaccctttacgtttttagca-tgtttgtatctaatata 19062181  T
Q  118 ctctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||||| |||||||||||||||||| ||||    
T  19062180 ctctatcaatttaaatgaatgaatattgttt 19062150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 36943065 - 36942924
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    ||||||||||||||||||| ||||| ||  || ||||| ||||||  |  ||||||||| | | |||  ||||||||||||||| |||||| | |||| |    
T  36943065 ttttatcatattatttgtaggcattatgccgt-gtatgctattaatctgggtgctgtgagtatgttcgcagattcaccctttacgtttttagcgatgttt 36942967  T
Q  106 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||| |||| |||||||| ||||| ||||||||||||||||||    
T  36942966 gtatctgatgtactctattgatttgaatgaatgaatatcgttt 36942924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 9169200 - 9169059
Alignment:
Q  8 ttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattc-accctttacatttttatcaatgtatg 106  Q
    ||||||||||||||||| ||||||||  |||||||| |||||||||   |||||||| ||| |||| |||||| ||||||||| ||||||   |||| |     
T  9169200 ttatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcacagattcaaccctttacgtttttagtgatgtttt 9169101  T
Q  107 tatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||  |||| |||||||| |||||| |||||||||||    
T  9169100 tatctgatgcactcaatcgatttgaatgaacgaatatcgttt 9169059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 1415708 - 1415851
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||||||||||| |||||||||| |||||||   |||  ||| |||||||||  ||| ||||| ||| |||  ||||||||| || || |||||| | |    
T  1415708 ttaggttttatcagattatttgtaggcattttaccgtttaatgctattaacttgggtgttgtgagtttgttcgcagattcacctttaacgtttttagcga 1415807  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||| ||||| |||| || ||||||||||| ||||||||||||||    
T  1415808 tgtttgtatctgatgtaatctatcgatttgaatgaatgaatatc 1415851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 6358830 - 6358735
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||||||||||||||||||| | ||||||| |||||||| |||||||||  ||| ||||| ||||||| |||||||||  ||||| ||||||    
T  6358830 ttagattttatcatattatttgtacgtattttgtcgttgtatgctattaacttgggtgttgtgagttttttcgtagattcactatttacgttttta 6358735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 29279514 - 29279361
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    ||||||||||||||||||| ||||||||  ||| |||| |||||||| | ||| ||||| ||| |||  | ||||||| ||||| |||||| | |||| |    
T  29279514 ttttatcatattatttgtaggcattttgccgttttatgctattaactatggtgttgtgagtttgttcgcatattcaccatttacgtttttagcgatgtct 29279415  T
Q  106 gt-----atatgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||     || ||||||||| |||| |||| ||||||||||||||||||| ||||    
T  29279414 gtatttgatgtgatatactttatcaatttgaatgaatgaatatcgtttagtttt 29279361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 10237165 - 10237070
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||| ||||||||||||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||| ||| ||||||    
T  10237165 ttagatttcatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacgttttta 10237070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 12677399 - 12677253
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||| ||| |||||||   ||| |||| |||||||||  ||  | ||| ||| |||  ||||||||||||||  |||||| | |    
T  12677399 ttaggttttatcatattatt-gtaggcatttttccgttttatgctattaacttgggtattatgagtttattcgcagattcaccctttatgtttttagcga 12677301  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| || ||| ||||||| ||||||||||||||||||    
T  12677300 tgtttgtatctgatgtaatctgtcgatttgaatgaatgaatatcgttt 12677253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 31193209 - 31193138
Alignment:
Q  77 attcaccctttacatttttatcaatgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||||||||||| ||||||   |||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  31193209 attcaccctttacgtttttagtgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 31193138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 33760135 - 33760047
Alignment:
Q  8 ttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    ||||||||||||||||| |||||||| ||||||| | ||||||||| |||||||| | ||| || | ||| ||| ||||||| ||||||    
T  33760135 ttatcatattatttgtaggcattttgctgttgtaagctattaacttgtgtgctgttagtttgtttacagactcatcctttacgttttta 33760047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 13878701 - 13878646
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatata 171  Q
    ||||||||| |||| |||||||||||||||||||||||| | | ||||||||||||    
T  13878701 tactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaaaatatata 13878646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 14018826 - 14018771
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatata 171  Q
    ||||||||| |||| |||||||||||||||||||||||| | | ||||||||||||    
T  14018826 tactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaaaatatata 14018771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14955680 - 14955775
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| |||||||||||||||||||  |||||| |  |||||||||||||||||  ||| ||||| ||| |||  ||||||| |||||| |||||||    
T  14955680 ttagattttatcatattatttgtagacattttatcattgtatgttattaacttaggtgttgtgagtttgttcgcagattcatcctttatattttta 14955775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 30399978 - 30399835
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| ||||||||  || |||||| ||||||||  ||| ||| | ||| |||  ||||||| |||||||||||||  | |    
T  30399978 ttagattttatcatattatttgtaggcattttgccgtcgtatgtcattaacttaggtgttgtaagtttgttcgcagattcatcctttacattttttgcga 30399879  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    | | | ||| |||| ||||| ||| |||| ||| ||||||||||    
T  30399878 tatttatatctgatgtactcgatcaatttgaataaatgaatatc 30399835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 32448557 - 32448470
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||||||||||||||| ||||||||  |||||||| |||||||||   || ||||| ||| |||||||||||| | |||| |||||||    
T  32448557 tatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcatagattcatcatttatattttta 32448470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 36868433 - 36868492
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatata 171  Q
    ||||||||||||| |||| |||||||||||||||||||||||| | | |||||| |||||    
T  36868433 gatatactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaaaaaatata 36868492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 37994435 - 37994581
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| |||||||| |||| |||| |||||||||  ||| ||||| ||| |||  ||||||| | |||||  |||||   |    
T  37994435 ttagattttatcatattatttgtaggcattttgctgttatatgctattaacttgggtgttgtgagtttgttcgcagattcatcttttacgattttaggga 37994534  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||  | |||| || |||||| |||| ||||||||||||||||||    
T  37994535 tgt-tgattctgatgtattctatcaatttgaatgaatgaatatcgttt 37994581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 43397067 - 43396973
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||| ||| | ||| |||  ||||||||||||||| ||||||    
T  43397067 ttaggttttatcatattatttgtacgcattttgccgttttatgctattaacttgggtgttgttagtttgttc-cagattcaccctttacgttttta 43396973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 148
Target Start/End: Complemental strand, 459098 - 459060
Alignment:
Q  110 atgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  459098 atgatatactctatcgatttgaatgaatgaatatcgttt 459060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 3309105 - 3309191
Alignment:
Q  10 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||||||||||||||  |||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||||||| ||| ||||||    
T  3309105 atcatattatttgtagtcattttgccgttgtatgctattaacttgggtgctgtgagtttattcgcagattcaccctatacgttttta 3309191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 28533898 - 28533808
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    ||||||||||||||||||| | ||||||| |||||||| |||||||||  ||| ||||| ||| |||  |||| |||| ||||| ||||||    
T  28533898 ttttatcatattatttgtaggtattttgtcgttgtatgctattaacttgagtgttgtgagtttgttcgcagatccaccttttacgttttta 28533808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 11550377 - 11550316
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatatat 172  Q
    |||| ||||||||| |||| |||||||||||||| ||||||||| | |||||||| ||||||    
T  11550377 tgatgtactctatcaatttgaatgaatgaatatcatttatttttgtcagaaaaaaaatatat 11550316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41694772 - 41694825
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttt 54  Q
    |||| |||||||||||||||| || ||||||||| ||| |||||||||||||||    
T  41694772 ttagattttatcatattatttataggcattttgtcgttatatgttattaacttt 41694825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 17249088 - 17248941
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgta 108  Q
    ||||||||||||||||  |||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||| | ||||| |||||| | || | ||      
T  17249088 tatcatattatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcatttacgtttttagcgatct-tgat 17248990  T
Q  109 tatgatatactctatcgatttaaatgaatgaatatc-gtttatttttat 156  Q
    | |||| || | ||||||||| ||||||||||||||  |||||||||||    
T  17248989 tctgatgtattttatcgatttgaatgaatgaatatcattttatttttat 17248941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 17767262 - 17767210
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatat 168  Q
    ||||||||| |||||||||||||||||||||||||| || | | |||||||||    
T  17767262 tactctatcaatttaaatgaatgaatatcgtttattgttgtaaaaaaaaatat 17767210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 28871731 - 28871635
Alignment:
Q  7 tttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 103  Q
    ||||||||| || | ||||||||||||  |||||||  |||||||||   |||||||| ||| ||| | ||||||||||||| ||||||| ||||||    
T  28871731 tttatcatactaatcgtaagcattttgccgttgtatactattaacttggatgctgtgagtttgttcgtggattcaccctttatatttttagcaatgt 28871635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 43696292 - 43696348
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaata 167  Q
    |||| ||||||||| |||| |||||||||||||||||||||||| | | ||||||||    
T  43696292 tgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaaaata 43696348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 10548343 - 10548390
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| ||| ||||||| || ||||||||||||||||||||||||||||    
T  10548343 ttttctcaaattatttataggcattttgttgttgtatgttattaactt 10548390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 10929821 - 10929868
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||||| || |||||||||||||| ||| |||||||||    
T  10929821 ttttatcatattatttataggcattttgttgttgaatgctattaactt 10929868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 151
Target Start/End: Complemental strand, 11798230 - 11798195
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatt 151  Q
    ||||||||| ||||||||||||||||||||||||||    
T  11798230 tactctatcaatttaaatgaatgaatatcgtttatt 11798195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 16376095 - 16376190
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 101  Q
    |||||||||||||||||||  ||||||| |||||||||  ||||||||   || ||||| ||| |||  ||||||||| | |||||||||| ||||    
T  16376095 ttttatcatattatttgtagtcattttggtgttgtatgcgattaacttggatgatgtgagtttgttcgcagattcaccgtctacatttttaacaat 16376190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 27097352 - 27097261
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||||||||||||||||||| | ||||||  |||||||  |||||||||  ||| ||||| ||| ||   ||||||||||||||| ||||||    
T  27097352 gttttatcatattatttgtaggaattttgccgttgtatactattaacttgggtgttgtgagtttgtttgcagattcaccctttacgttttta 27097261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 32190820 - 32190867
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||||||||||||||||  | ||||||| |||||||||    
T  32190820 ttttatcatattatttgtaagcatttttctattgtatgctattaactt 32190867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 3527415 - 3527453
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  3527415 tactctatcaatttgaatgaatgaatatcgtttattttt 3527453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 4604012 - 4603970
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||    
T  4604012 gatatactctatcaatttgaatgaatgaatatcgtttactttt 4603970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 7640035 - 7639997
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  7640035 tactctatcaatttaaatgaatgaatatcatttattttt 7639997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 153
Target Start/End: Complemental strand, 8064503 - 8064457
Alignment:
Q  107 tatatgatatactctatcgatttaaatgaatgaatatcgtttatttt 153  Q
    ||||| |||||||||||| || | |||||||||||||||||||||||    
T  8064503 tatatcatatactctatcaatgtgaatgaatgaatatcgtttatttt 8064457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 9689677 - 9689639
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  9689677 tactctatcaatttaaatgaatgtatatcgtttattttt 9689639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 9978374 - 9978332
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||    
T  9978374 gatatactctatcaatttgaatgaatgaatatagtttattttt 9978332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 11942797 - 11942835
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  11942797 tactctatcgatttgaatgaatgaatatcgtttactttt 11942835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 13548611 - 13548573
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  13548611 tactatatcaatttaaatgaatgaatatcgtttattttt 13548573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 16136507 - 16136545
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  16136507 tactctatcaatttgaatgaatgaatatcgtttattttt 16136545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 17151581 - 17151627
Alignment:
Q  7 tttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||| ||| | |||||||||||||||| |||||||||    
T  17151581 tttatcatattattagtaggtattttgttgttgtatgctattaactt 17151627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 18107690 - 18107604
Alignment:
Q  10 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    ||||||||||||||| ||||||||| ||| ||| ||||||||||  ||| ||||| ||| |||  | |||||| |||||| ||||||    
T  18107690 atcatattatttgtaggcattttgtcgttttatattattaacttgcgtgttgtgagtttgttcgcatattcactctttacgttttta 18107604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 20560825 - 20560787
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  20560825 tactctatcaatttgaatgaatgaatatcgtttattttt 20560787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 25068270 - 25068308
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  25068270 tactctatcaatttgaatgaatgaatatcgtttattttt 25068308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 29543222 - 29543260
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  29543222 tactctatcaatttgaatgaatgaatatcgtttattttt 29543260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 31908514 - 31908472
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttatttt 153  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  31908514 tgatgtactctatcaatttgaatgaatgaatatcgtttatttt 31908472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 32711921 - 32711879
Alignment:
Q  114 tatactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    ||||||||||  ||| |||||||||||||||||||||||||||    
T  32711921 tatactctattaattaaaatgaatgaatatcgtttatttttat 32711879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 33012477 - 33012515
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  33012477 tactctatcaatttgaatgaatgaatatcgtttattttt 33012515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 33140587 - 33140625
Alignment:
Q  10 atcatattatttgtaagcattttgttgttgtatgttatt 48  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  33140587 atcatattatttgtaggcattttgtggttgtatgttatt 33140625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 35333934 - 35333972
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  35333934 tactctatcaatttgaatgaatgaatatcgtttattttt 35333972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 144
Target Start/End: Original strand, 43711790 - 43711824
Alignment:
Q  110 atgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||||||||||||||| |||||||||||||||||||    
T  43711790 atgatatactctatcaatttaaatgaatgaatatc 43711824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 18056403 - 18056358
Alignment:
Q  8 ttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    ||||||||||||||||||| |||||||  ||||||||| |||||||    
T  18056403 ttatcatattatttgtaagtattttgtcattgtatgttgttaactt 18056358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 44942715 - 44942752
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttt 153  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  44942715 tactctatcaatttgaatgaatgaatatcgtttatttt 44942752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 12705115 - 12705155
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    ||||||||| |||| |||||||||||||| |||||||||||    
T  12705115 tactctatcaatttgaatgaatgaatatcctttatttttat 12705155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19028863 - 19028763
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||||||| |||||||| ||||||| | ||| |||| |||||||||  ||| |||||  || |||  | ||||||| |||||||||||| |||    
T  19028863 ttagattttatcatactatttgtaggcattttttcgttttatgctattaacttgagtgttgtgagattgttcgcaaattcaccttttacatttttaacaa 19028764  T
Q  101 t 101  Q
    |    
T  19028763 t 19028763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 31210556 - 31210524
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  31210556 ttaggttttatcatattatttgtaggcattttg 31210524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 34962687 - 34962647
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    ||||||||| |||| |||||||||||||| |||||||||||    
T  34962687 tactctatcaatttgaatgaatgaatatcatttatttttat 34962647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 31984305 - 31984459
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||||||||||||||||||| |||||||||||| |||||||| |||||||||  ||| ||||||||| |||  ||||| ||||||||| |||||| |||    
T  31984305 ttaggttttatcatattatttttaagcattttgtcgttgtatgctattaacttgggtgttgtgactttgttcgcagatttaccctttacgtttttaacaa 31984404  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcg-tttatttttat 156  Q
    ||| ||||| |||| |||||  ||||||||||||||||||||||| |||||||||||    
T  31984405 tgtgtgtatttgatgtactc--tcgatttaaatgaatgaatatcgttttatttttat 31984459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 35484336 - 35484192
Alignment:
Q  4 ggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 103  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||||||  ||| ||||| ||| |||  |||||| ||||||||||||||| | ||||    
T  35484336 ggttttatcatattatttgtaagcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcgccctttacatttttagcgatgt 35484237  T
Q  104 atgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
     ||||| |||| |||||||||||||| ||||||||||||||||||    
T  35484236 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 35484192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 11462426 - 11462283
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| | ||||||| |||||||| |||||||||  ||||||||| ||| ||| |||||||||| ||||| |||||| | ||||     
T  11462426 gttttatcatattatttgtaggaattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccatttacgtttttagcgatgtt 11462327  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  11462326 tgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 11462283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 4413258 - 4413405
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||||||| |||||| ||  ||||||||| ||| |||| ||||||| ||||||| |||||| | |    
T  4413258 ttaggttttatcatattatttgtaggcattttgctgttgtatgctattaaattgagtgctgtgaatttgttcacagattcatcctttacgtttttagcga 4413357  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||||||| || |||| ||||||||||    
T  4413358 tgtttgtatctgatgtactctatcgatttgaacgaataaatatcgttt 4413405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 21947562 - 21947419
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  ||||||| ||||||||||  ||| ||||| ||| |||  ||||| |||||||||||||||| | || |     
T  21947562 gttttatcatattatttgtaggcattttgccgttgtattttattaacttgggtgatgtgagtttgttcgcagatttaccctttacatttttaacgatatt 21947463  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  21947462 tgtatatgatgtactctatcgatttgaatgaatgaatatcgttt 21947419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 7337608 - 7337465
Alignment:
Q  4 ggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 103  Q
    ||||||||||||||||||||| |||||||| ||||| ||| |||||||||   || ||||| ||| |||  |||||||||||||| ||||||| | ||||    
T  7337608 ggttttatcatattatttgtaggcattttgctgttgcatgctattaacttggctgttgtgagtttgttcgcagattcaccctttatatttttagcgatgt 7337509  T
Q  104 atgtatatgatatactctatcgatttaaatgaatgaatatcgtt 147  Q
     ||||| |||| |||||||||||||| |||||||||||||||||    
T  7337508 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgtt 7337465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 14872783 - 14872926
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  |||||||| |||||||||   |||||||| ||| |||  | ||||||||||||| | ||   | |    
T  14872783 ttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatattcaccctttacttcttctgcga 14872882  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||| ||||| |||| |||||||||||||||||||||||||||||    
T  14872883 tgtttgtatgtgatgtactctatcgatttaaatgaatgaatatc 14872926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 34878226 - 34878079
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||| ||||| ||| |||| ||||||||| ||||| |||||| | |    
T  34878226 ttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcacagattcaccttttacgtttttagcga 34878127  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| |  || |||| || ||||||||||| ||||||||||||||||||    
T  34878126 tgtttccatctgatgtaatctatcgatttgaatgaatgaatatcgttt 34878079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 49504540 - 49504396
Alignment:
Q  4 ggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 103  Q
    ||||||| |||| ||||| || |||||||   |||||||| |||||||||  ||||||||| ||| |||  ||||||||||||||| |||||| | ||||    
T  49504540 ggttttaacataatatttttaggcattttaccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttaacgatgt 49504441  T
Q  104 atgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
     ||||| | || |||||||||||||| ||||||||||||||||||    
T  49504440 ttgtatcttatgtactctatcgatttgaatgaatgaatatcgttt 49504396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 10776409 - 10776266
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||| ||||||||| |||||||| ||||||||  |||||||||  ||||||||| ||| |||  |  |||||||||||| |||||| | |    
T  10776409 ttaggttttatcattttatttgtaggcattttgctgttgtattctattaacttgggtgctgtgagtttgttcgcaatttcaccctttacgtttttagcga 10776310  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||| || || |||||||||||||| |||| |||||| |||||||    
T  10776309 tgtttgcatctgatatactctatcaatttgaatgaacgaatatc 10776266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 16989515 - 16989662
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||||||||| ||| ||   ||||| ||| ||||| ||||||   |    
T  16989515 ttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgtttgcagatttaccatttacgtttttagtga 16989614  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| |||||||||| || ||||||||||| |||||||||| |||||||    
T  16989615 tgtttgtatatgatgtaatctatcgatttgaatgaatgaaaatcgttt 16989662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 51373801 - 51373659
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    ||||||||||||||||||| ||||||||| || ||||| |||||||||  ||| ||||| ||| ||   ||||||||||||||| |||||||| |||| |    
T  51373801 ttttatcatattatttgtaggcattttgtcgtcgtatgctattaacttgggtgttgtgagtttgtttggagattcaccctttacgtttttatcgatgttt 51373702  T
Q  106 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||| | || |||| |||| |||| |||||||||| |||||||    
T  51373701 gtatctaatgtactttatcaatttgaatgaatgaacatcgttt 51373659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 29738612 - 29738459
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||| |||||||||||||| |  |||||| |  |||||||| |||||||||  ||||||||| ||  |||  ||||||||||||||| ||||||   |    
T  29738612 ttaggtgttatcatattatttattggcatttggccgttgtatgctattaacttgggtgctgtgagttcgttcgcagattcaccctttacgtttttagtga 29738513  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||| ||||| |||| |||||||||||||| ||||| |||||||||||| |||||    
T  29738512 tgtttgtatctgatgtactctatcgatttgaatgattgaatatcgtttgttttt 29738459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 21687522 - 21687669
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||| | ||| |||| |||||| ||  ||| ||||| ||| ||   ||||||||| ||||| ||| || | |    
T  21687522 ttaggttttatcatattatttgtaggcattttctcgttttatgctattaatttgggtgttgtgagtttgttagcagattcaccttttacgtttctagcga 21687621  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| || ||||||||||| ||||||||||||||||||    
T  21687622 tgtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttt 21687669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 32395146 - 32395288
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    ||||||||||||||||| || ||||||||  | |||||| |||||||||  ||||||| | ||| |||   |||||||||||||| |||||| |  |||     
T  32395146 gttttatcatattatttataggcattttgccgctgtatgctattaacttgggtgctgtaagtttgttcgc-gattcaccctttacgtttttaacggtgtt 32395244  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||| |||| |||||||||||||    
T  32395245 tgtatttgatgtactctatcgatttgaatggatgaatatcgttt 32395288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 45415702 - 45415849
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  |||||||  |||||| ||  ||| ||||| ||| |||  | ||||||||||||| |||||| | |    
T  45415702 ttaggttttatcatattatttgtaggcattttgccgttgtataatattaatttgggtgttgtgagtttgttcgcatattcaccctttacgtttttagcga 45415801  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    | | |||||||||| |||||||||  ||| |||||||  |||||||||    
T  45415802 tatgtgtatatgatgtactctatcattttgaatgaattgatatcgttt 45415849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 13144760 - 13144605
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||||||| |||||||| ||||||||   || |||| |||||||||   || ||||| ||| |||  |||||||||||||||||||||| | |    
T  13144760 ttagattttatcataatatttgtaggcattttgccattttatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacatttttaacga 13144661  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgtttatttttatg 157  Q
    ||| ||||| |||| ||||||||| |||| ||| |||| ||||| ||| ||||||||    
T  13144660 tgtttgtat-tgatgtactctatcaatttgaataaatgcatatcatttttttttatg 13144605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 24583102 - 24583236
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgta 108  Q
    |||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||| ||||||| ||||||| |||||| | || | ||      
T  24583102 tatcatattatttgtaggcattttgccgttgtatgatattaacttgggtgatgtgagtttgttcacagattcatcctttacgtttttagcgatct-tgat 24583200  T
Q  109 tatgatatactctatcgatttaaatgaatgaatatc 144  Q
    | |||| || ||||||||||| ||||||||||||||    
T  24583201 tctgatgtattctatcgatttgaatgaatgaatatc 24583236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 24583298 - 24583432
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgta 108  Q
    |||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||| |||||||||||||| | || | ||      
T  24583298 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcagattcatcctttacatttttagcgatct-tgat 24583396  T
Q  109 tatgatatactctatcgatttaaatgaatgaatatc 144  Q
    | |||| || ||||||||||| ||||||||||||||    
T  24583397 tctgatgtattctatcgatttgaatgaatgaatatc 24583432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 44915783 - 44915926
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| ||||||||  |||||||| |||  ||||  ||| ||||| ||| |||  | ||||| ||||||| ||||||   |    
T  44915783 ttagattttatcatattatttgtaggcattttgccgttgtatgctatcgacttgggtgatgtgagtttgttcgcatattcatcctttacgtttttagtga 44915882  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||| ||||| |||| ||||||||| |||| ||||||||||||||    
T  44915883 tgtttgtatctgatgtactctatcaatttgaatgaatgaatatc 44915926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 148
Target Start/End: Original strand, 26535514 - 26535627
Alignment:
Q  35 tgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgtatatgatatactctatcgatttaaatg 134  Q
    ||||||||| |||||||||  ||| ||||| ||| ||| |||||| | | ||||| |||||| | |||| ||||| |||| ||||||||| |||| ||||    
T  26535514 tgttgtatgctattaacttgagtgttgtgagtttgttcgtagatttatcatttacgtttttagctatgtttgtatctgatgtactctatcaatttgaatg 26535613  T
Q  135 aatgaatatcgttt 148  Q
    ||||||||||||||    
T  26535614 aatgaatatcgttt 26535627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14489416 - 14489468
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||||||||||    
T  14489416 ttagattttatcatattatttgtaggtattttgttgttgtatgttattaactt 14489468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 5983984 - 5984067
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 88  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| |||  | ||||||||||||    
T  5983984 gttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgatgtgagtttgttcgcatattcacccttta 5984067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7836744 - 7836657
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 88  Q
    |||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||||||||| ||| |||  ||||||| ||||||    
T  7836744 ttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcagattcatccttta 7836657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34413040 - 34412945
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||| ||||||||||||||| ||||||||  ||||||||||||||||||  ||| ||||| ||| |||  ||||||||||| ||| ||||||    
T  34413040 ttagatttcatcatattatttgtaggcattttgcggttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctatacgttttta 34412945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 27580076 - 27579934
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||||||||||||  |||||||||||   || |||| |||||||||  ||| ||||| ||| |||  ||||||||||||||   ||||| |      
T  27580076 ttagattttatcatattattcataagcattttgccattttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttatcattttagcgt 27579977  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatat 143  Q
    ||| |||||||||| ||||||||| |||| ||| |||||||||    
T  27579976 tgtttgtatatgatgtactctatcaatttgaataaatgaatat 27579934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 31919136 - 31919285
Alignment:
Q  4 ggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 103  Q
    |||||||||||||||||||||  |||||||| |||||||| |||||||||   || || || ||| |||  ||||||| ||||||| |||||| | | ||    
T  31919136 ggttttatcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgcgagtttgttcgcagattcatcctttacgtttttagcgaagt 31919235  T
Q  104 atgtata-----tgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
     ||||||     |||| ||||||||| |||| ||||||||||| ||||||    
T  31919236 ttgtatatgatgtgatgtactctatcaatttgaatgaatgaatttcgttt 31919285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3228413 - 3228465
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||||||||||||| ||||||||  ||| ||||||||||||||    
T  3228413 ttaggttttatcatattatttgtaggcattttgccgttatatgttattaactt 3228465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 46399122 - 46399166
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  46399122 tatcatattatttataaacattttgttgttgtatgttattaactt 46399166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 15431609 - 15431494
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    |||||||||||||||||||  |||||| | |||||||| |||| ||||   || ||||| ||| |||  ||||||| ||||||| |||||| |||||| |    
T  15431609 ttttatcatattatttgtagacattttatcgttgtatgctattcacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcaatgttt 15431510  T
Q  106 gtatatgatatactct 121  Q
    |||| |||| ||||||    
T  15431509 gtatctgatgtactct 15431494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 44543424 - 44543511
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||||||||||||||| ||||||||  ||| |||| |||||||||  ||||||||| ||| |||  ||||||| ||||||| ||||||    
T  44543424 tatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgttttta 44543511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 16161972 - 16162066
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttt 95  Q
    |||| ||||||||||||||||||| ||||||||  || | ||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||    
T  16161972 ttagattttatcatattatttgtaggcattttgccgtggaatgctattaacttaggtgttgtgagtttgttcgcagattcaccctttacgttttt 16162066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 9341870 - 9341963
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttt 94  Q
    |||| ||||||||||||||||||| | |||||||||||||||  |||||||||   |  ||||| ||| ||| |||||||||| ||||| ||||    
T  9341870 ttagattttatcatattatttgtaggtattttgttgttgtatactattaacttgaatattgtgagtttattcttagattcaccttttacgtttt 9341963  T

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Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 23289262 - 23289193
Alignment:
Q  79 tcaccctttacatttttatcaatgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||| |||||| | |||| | |||| |||||||||| || ||||||||||| ||||||||||||||||||    
T  23289262 tcactctttacgtatttagcgatgtttgtatatgatgtaatctatcgatttgaatgaatgaatatcgttt 23289193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 940457 - 940529
Alignment:
Q  76 gattcaccctttacatttttatcaatgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||||| ||||||  |||||| | |||| ||||| | || |||||||| ||||||||||||||||||||||||    
T  940457 gattcatcctttaagtttttagcgatgtttgtatcttatgtactctattgatttaaatgaatgaatatcgttt 940529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 12147758 - 12147714
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||    
T  12147758 gatatactctatcaatttgaatgaatgaatatcgtctatttttat 12147714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 25032795 - 25032755
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  25032795 tactctatcaatttgaatgaatgaatatcgtttatttttat 25032755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 34659347 - 34659295
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatat 168  Q
    ||||||||| |||| |||||||||||||| ||||||||| | |||||||||||    
T  34659347 tactctatcaatttgaatgaatgaatatcatttatttttgtaagaaaaaatat 34659295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 49648818 - 49648774
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 50  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||    
T  49648818 ttttattatattatttgtaaacattttgttattgtatgttattaa 49648774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 154
Target Start/End: Original strand, 1141110 - 1141145
Alignment:
Q  119 tctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||||||||||||| |||||||||||||||||||||    
T  1141110 tctatcgatttaaaagaatgaatatcgtttattttt 1141145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 33703216 - 33703177
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttta 155  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  33703216 tactctatcaatttaaacgaatgaatatcgtttattttta 33703177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 36775658 - 36775563
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||| ||||||||||||||| ||||||||  |||||||| |||||||||   || ||||| ||| |||  ||||||||||| ||| ||||||    
T  36775658 ttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctatacgttttta 36775563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 36894252 - 36894209
Alignment:
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  36894252 tgtatttgatgtactctatcgatttgaatgaatgaatatcgttt 36894209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 39888326 - 39888473
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||||||||| ||| || ||||||| | |||||||| |||||||||   || ||||| ||| |||  |||||||| |||||| |||| |   |    
T  39888326 ttagattttatcatattctttatatgcattttatcgttgtatgctattaacttagatgttgtgagtttattcgcagattcactctttacgttttgagtga 39888425  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| || | |||| ||||  |||||||||||||||||    
T  39888426 tgtttgtatctgatgtattatatcaatttgtatgaatgaatatcgttt 39888473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 48750329 - 48750424
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||| ||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  | ||||||||| ||| ||||||    
T  48750329 ttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcaccctatacgttttta 48750424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 4882069 - 4882031
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  4882069 tactctatcaatttgaatgaatgaatatcgtttattttt 4882031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 12872035 - 12872073
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  12872035 tactctatcaatttgaatgaatgaatatcgtttattttt 12872073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 13152856 - 13152894
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  13152856 tactctatcaatttgaatgaatgaatatcgtttattttt 13152894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 17348004 - 17348042
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  17348004 tactctatcaatttaaatgagtgaatatcgtttattttt 17348042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 29205697 - 29205735
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  29205697 tactctatcaatttgaatgaatgaatatcgtttattttt 29205735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 30712239 - 30712197
Alignment:
Q  11 tcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||| ||||||||||||| |||| |||||||||    
T  30712239 tcatattatttgtaggcattttgttgttctatgctattaactt 30712197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 44517577 - 44517615
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  44517577 tactctatcaatttgaatgaatgaatatcgtttattttt 44517615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 51418413 - 51418451
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  51418413 tactctatcaatttaaatgaatgaatatcgtttactttt 51418451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 3233203 - 3233240
Alignment:
Q  119 tctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  3233203 tctatcaatttgaatgaatgaatatcgtttatttttat 3233240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 5984070 - 5984107
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  5984070 tgatatattctatcgatttgaatgaatgaatatcgttt 5984107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 8758070 - 8758107
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttt 153  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  8758070 tactctatcaatttaaatgaatgaatatcgtatatttt 8758107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 19596405 - 19596356
Alignment:
Q  4 ggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    ||||||||||||||||||||| ||||||||  ||| |||| |||||||||    
T  19596405 ggttttatcatattatttgtaggcattttgccgttttatgctattaactt 19596356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 28053660 - 28053623
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatg 43  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  28053660 ttttatcatattatttgtaggcattttattgttgtatg 28053623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 31317886 - 31317975
Alignment:
Q  7 tttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||||||||||||||||| ||||||| | |||| ||  |||||||||  ||| ||||| ||| |||  | ||||||||||||| ||||||    
T  31317886 tttatcatattatttgtaggcattttatcgttgcatcctattaacttgggtgatgtgagtttgttcgcaaattcaccctttacgttttta 31317975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 171531 - 171567
Alignment:
Q  113 atatactctatcgatttaaatgaatgaatatcgttta 149  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  171531 atatactctatcaatttaaatgaatgaatatcattta 171567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 142
Target Start/End: Original strand, 1742476 - 1742572
Alignment:
Q  46 attaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgtatatgatatactctatcgatttaaatgaatgaata 142  Q
    ||||||||  ||| ||||| ||| |||| ||||||||||||||| |||||| | |||| | ||| |||| || | || |||||| ||||||||||||    
T  1742476 attaacttgggtgatgtgagtttattcacagattcaccctttacgtttttagcgatgtttatatctgatgtaatatagcgatttgaatgaatgaata 1742572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 8211196 - 8211108
Alignment:
Q  60 tgtgacttttttcatagattcaccctttacatttttatcaatgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| ||| ||| ||||||||| |||||| |||||| | |||| ||||| | || ||||||||||| || | ||||||||||| ||||    
T  8211196 tgtgagtttgttcgtagattcacgctttacgtttttagcgatgtttgtatctaatgtactctatcgaattgattgaatgaatattgttt 8211108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 19061061 - 19061105
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||||| ||||||||  |||||||| |||||||||    
T  19061061 tatcatattatttgtaggcattttgccgttgtatgctattaactt 19061105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 144
Target Start/End: Original strand, 45659422 - 45659450
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatc 144  Q
    |||||||||||||||||||||||||||||    
T  45659422 tactctatcgatttaaatgaatgaatatc 45659450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 49652243 - 49652283
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttat 156  Q
    ||||||||| |||| |||||||||||||| |||||||||||    
T  49652243 tactctatcaatttgaatgaatgaatatcatttatttttat 49652283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 67945 - 67802
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    ||||||||||||||||| || ||||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||||||||||| |||||| ||||||     
T  67945 gttttatcatattatttataggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcaatgtt 67846  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||    
T  67845 tgtatctgatatactctatcgatttgaatgaatgaataccgttt 67802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 12170610 - 12170757
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||| ||||||||||||||| |||||||| ||||||||| |||||||||  ||||||||| |||  ||  | |||||||||||||||||||| | |    
T  12170610 ttaggtttgatcatattatttgtaggcattttgctgttgtatgctattaacttgggtgctgtgagtttgctcgcatattcaccctttacatttttagcga 12170709  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  12170710 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 12170757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 9341595 - 9341452
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    ||||||||||||| |||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| ||||||     
T  9341595 gttttatcatattgtttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcaatgtt 9341496  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| |||||||||||||| ||||||||| ||||||||    
T  9341495 tgtatctgatgtactctatcgatttgaatgaatgagtatcgttt 9341452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 606350 - 606489
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||   ||||||| |||||||||  ||||||||| ||| |||  ||||||||||||||| |||||| | ||||     
T  606350 gttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttaacgatgtt 606449  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||||| |||| |||||||||||||| ||||||||||||||    
T  606450 tgtatctgatgtactctatcgatttgaatgaatgaatatc 606489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 3913522 - 3913375
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||   ||||||| |||||||||  ||| ||||| ||| |||  |||| |||||||||| |||||| | |    
T  3913522 ttaggttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgttgtgagtttgttcgcagatgcaccctttacgtttttagcga 3913423  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  3913422 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 3913375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 33053112 - 33052969
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||   |||||||| ||| |||  | ||||||||||||| |||||| ||||||     
T  33053112 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatattcaccctttacgtttttagcaatgtt 33053013  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||    
T  33053012 tgtatttgatgtactctatcaatttgaatgaatgaatatcgttt 33052969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 23128764 - 23128902
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||| ||  ||||||||| ||| |||  |||||||||||||||||||||| | ||||     
T  23128764 gttttatcatattatttgtaggcattttgccgttgtatgctattaatttgggtgctgtgagtttgttcgcagattcaccctttacatttttagcgatgtt 23128863  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatat 143  Q
    ||||| |||| |||||| || |||| |||||||||||||    
T  23128864 tgtatctgatgtactctgtctatttgaatgaatgaatat 23128902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 32327165 - 32327021
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  ||   ||| |||||||||  ||||||||| ||| |||  | ||||||||||||| |||||| | |    
T  32327165 ttaggttttatcatattatttgtaggcattttgccgt---atgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttagcga 32327069  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  32327068 tgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 32327021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 21426622 - 21426489
Alignment:
Q  13 atattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgtatatg 112  Q
    ||||||||||||  |||||||  |||||||| |||||||||  ||||||||| ||| |||  | ||||||| ||||| |||||| | |||| ||||| ||    
T  21426622 atattatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcatattcaccgtttacgtttttagcgatgtttgtatctg 21426523  T
Q  113 atatactctatcgatttaaatgaatgaatatcgt 146  Q
    || |||||||||||||| ||||||||||||||||    
T  21426522 atgtactctatcgatttgaatgaatgaatatcgt 21426489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 30894741 - 30894905
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    ||||||||||||||||||||||||  ||||||| ||||||||| ||| |||||   |||||||| ||| ||   ||||||| ||||||| |||||| | |    
T  30894741 ttaggttttatcatattatttgtagtcattttgctgttgtatgctatcaacttggatgctgtgagtttattgc-agattcatcctttacgtttttagcga 30894839  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcg-tttatttttatgagaaaaaa 165  Q
    ||| ||||| |||| || || |||||||| ||||||||||||||| ||||||||||| | ||||||    
T  30894840 tgtttgtatctgatgtattccatcgatttgaatgaatgaatatcgttttatttttataaaaaaaaa 30894905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 29255394 - 29255250
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| ||||||   ||||||||| |||||||||  ||| ||||| ||| |||| |||||||||| |||| |||||| | |    
T  29255394 ttagattttatcatattatttgtaggcatttcactgttgtatgctattaacttgggtgttgtgagtttgttcacagattcacccattacgtttttagcga 29255295  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcg 145  Q
    ||| ||||| |||| ||||| ||| |||| | |||||||||||||    
T  29255294 tgtttgtatttgatgtactccatcaatttgactgaatgaatatcg 29255250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 14175015 - 14174872
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| |||||||   ||| |||| | |||||||  ||| ||||| ||| |||  ||||||||| ||||| |||||| ||||||     
T  14175015 gttttatcatattatttgtaggcatttttccgttttatgctgttaacttgagtgatgtgagtttgttcgcagattcaccttttacgtttttagcaatgtt 14174916  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| || | ||||||||| ||||||||||||||||||    
T  14174915 tgtatctgatgtaatatatcgatttgaatgaatgaatatcgttt 14174872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 14179551 - 14179408
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| |||||||   ||| |||| | |||||||  ||| ||||| ||| |||  ||||||||| ||||| |||||| ||||||     
T  14179551 gttttatcatattatttgtaggcatttttccgttttatgctgttaacttgagtgatgtgagtttgttcgcagattcaccttttacgtttttagcaatgtt 14179452  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| |||| || | ||||||||| ||||||||||||||||||    
T  14179451 tgtatctgatgtaatatatcgatttgaatgaatgaatatcgttt 14179408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 34018706 - 34018849
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| |||||||  |||||||| |||||| |||  ||| ||||| ||| |    ||||| ||| ||||| |||||| | ||||     
T  34018706 gttttatcatattatttgtaggcattttactgttgtatattattatcttgggtgttgtgagtttgtctgcagatttaccatttacgtttttagcgatgtt 34018805  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||||| | |||||||||||| |||||||||||||||||||||||    
T  34018806 tgtatctaatatactctatcaatttaaatgaatgaatatcgttt 34018849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 7515150 - 7515004
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| |||||||  || |||||| |||||||||   | |||||| ||| |||  | ||||||||||||| |||||| | |    
T  7515150 ttaggttttatcatattatttgtaggcatttttctgctgtatgctattaacttggtttctgtgagtttgttcgcaaattcaccctttacgtttttagcga 7515051  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    | | | ||| ||||  ||||||||||||| ||||||||||||||||||    
T  7515050 t-tttatatctgatgcactctatcgatttgaatgaatgaatatcgttt 7515004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 34185641 - 34185499
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| | ||||||| ||| | |  ||| |||||  ||| ||||||||| ||| |||||||||| ||||| |||||| | |    
T  34185641 ttagattttatcatattatttgtaggtattttgtcgttatgtactatcaacttgggtgatgtgactttattcgtagattcaccttttacttttttagcga 34185542  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||| || || |||||||||||||| |||| ||||||||||||||    
T  34185541 tgt-tgaatctgatatactctatcaatttgaatgaatgaatatc 34185499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28981319 - 28981414
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||||||||||||  ||||| | |||||||||||||||| |||||||||| ||| ||||| ||| |||| | ||||||||||||| ||||||    
T  28981319 ttagattttatcatattgcttgtaggaattttgttgttgtatgctattaactttggtgttgtgagtttgttcacatattcaccctttacgttttta 28981414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 29319822 - 29319682
Alignment:
Q  5 gttttatcatattattt-gtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 103  Q
    ||||||||||||||||| |||||||||||   |||||||| |||||||||   || | ||| ||| |||  ||||||||| ||||| |||||| | ||||    
T  29319822 gttttatcatattattttgtaagcattttaccgttgtatgctattaacttggttgttatgagtttgttcgcagattcaccttttacgtttttagcgatgt 29319723  T
Q  104 atgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
     ||||| ||||||||| |||  |||| ||||||||||||||    
T  29319722 ttgtatctgatatactttattaatttgaatgaatgaatatc 29319682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 153
Target Start/End: Complemental strand, 30608458 - 30608311
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    ||||||||||||||||||| |||||||   |||||||| |||||||||   || |||||  || ||   | ||||| ||||||| |||||| | |||| |    
T  30608458 ttttatcatattatttgtaggcattttaccgttgtatgctattaacttggatgttgtgagattgtttgcaaattcatcctttacgtttttaacgatgttt 30608359  T
Q  106 gtatatgatatactctatcgatttaaatgaatgaatatcgtttatttt 153  Q
    |||| |||| ||||||||| |||| ||||||||||| |||||| ||||    
T  30608358 gtatctgatttactctatcaatttgaatgaatgaatgtcgtttgtttt 30608311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 679251 - 679352
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||| | || |||||||  |||||||| |||||||||  ||| ||||| ||| ||| |||||||||||||||| |||||| |||    
T  679251 ttagattttatcatattattcgcaaacattttgc-gttgtatgctattaacttaggtgttgtgagtttgttcgtagattcaccctttacgtttttagcaa 679349  T
Q  101 tgt 103  Q
    |||    
T  679350 tgt 679352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 9380165 - 9380267
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| ||||||||| |||||||  ||||| |||   || ||||| ||| |||  | ||||||| ||||||||||||||||    
T  9380165 ttagattttatcatattatttgtatgcattttgtcgttgtattctattatcttggatgttgtgagtttgttcgcatattcaccatttacatttttatcaa 9380264  T
Q  101 tgt 103  Q
    |||    
T  9380265 tgt 9380267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 30493679 - 30493821
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    ||||||||| || |||||| ||||||||  |||||||| ||||||| |  ||| ||||| ||| |||  ||||||||||||||| |||||| | ||||      
T  30493679 ttttatcatgttgtttgtaggcattttgccgttgtatgctattaacctgggtgttgtgaatttgttcgcagattcaccctttacgtttttagcgatgtta 30493778  T
Q  106 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |  | ||||||| |||||| |||| |||||||||||| |||||    
T  30493779 gattctgatatattctatctatttgaatgaatgaataacgttt 30493821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 7976130 - 7975983
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    ||||||||||   |||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  | ||||| ||||||  |||||| |||||| |    
T  7976130 ttttatcataccgtttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttgttcgcatattcatcctttatgtttttagcaatgt-t 7976032  T
Q  106 gtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |  | |||| || |||||| ||||||||||||||||||||||| |||||    
T  7976031 gattctgatgtattctatcaatttaaatgaatgaatatcgtttgttttt 7975983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14846169 - 14846117
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||||||||||||| |||||||| |||| |||| |||||||||    
T  14846169 ttaggttttatcatattatttgtaggcattttgctgttttatgctattaactt 14846117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 546173 - 546268
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||| ||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||| ||| ||| ||||||    
T  546173 ttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctatacgttttta 546268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 8102868 - 8102963
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||||||||||||||||||| ||||||||  || | |||||||||||||  ||||||||| ||| ||   ||||||||| ||||| ||||||    
T  8102868 ttagattttatcatattatttgtaggcattttgccgtggaatgttattaacttgggtgctgtgagtttgtttgcagattcaccttttacgttttta 8102963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 30776805 - 30776900
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||| ||||||||||||||||||| ||||||||  || | ||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| ||||||    
T  30776805 ttagattttatcatattatttgtaggcattttgccgtggaatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgttttta 30776900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 20225999 - 20226045
Alignment:
Q  7 tttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||||    
T  20225999 tttatcatattatttgtaggcattttgtcgttgtatgctattaactt 20226045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 22119983 - 22120029
Alignment:
Q  7 tttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||||    
T  22119983 tttatcatattatttgtaggcattttgtcgttgtatgctattaactt 22120029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 31705594 - 31705632
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  31705594 tactctatcaatttaaatgaatgaatatcgtttattttt 31705632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 4921600 - 4921564
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattt 152  Q
    ||||||||| |||||||||||||||||||||||||||    
T  4921600 tactctatcaatttaaatgaatgaatatcgtttattt 4921564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 31984394 - 31984453
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatat 170  Q
    |||| ||||||||| |||| ||||||| |||||| | |||||||||| ||||||||||||    
T  31984394 tgatgtactctatcaatttgaatgaataaatatcatatatttttatgtgaaaaaatatat 31984453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 148
Target Start/End: Original strand, 32060030 - 32060165
Alignment:
Q  13 atattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatgtatatg 112  Q
    |||||||||||| |||||||||  || |||| |||||| ||   || ||| | ||| |||  ||||| |||||||||||||||| | | || ||||| ||    
T  32060030 atattatttgtaggcattttgtcattttatgctattaaattggatgttgtaagtttgttcgcagatttaccctttacatttttagcgaagtttgtatctg 32060129  T
Q  113 atatactctatcgatttaaatgaatgaatatcgttt 148  Q
    || || | |||| |||| ||||||||||||||||||    
T  32060130 atgtaatatatcaatttgaatgaatgaatatcgttt 32060165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 2304530 - 2304492
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  2304530 tactctatcaatttaaatgaatgaatatcgtttactttt 2304492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 4085105 - 4085143
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  4085105 tactctatcgatttgactgaatgaatatcgtttattttt 4085143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 4660857 - 4660895
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  4660857 tactctatcaatttgaatgaatgaatatcgtttattttt 4660895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 5146355 - 5146393
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  5146355 tactctatcaatttgaatgaatgaatatcgtttattttt 5146393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 12654010 - 12653972
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  12654010 tactctatcaatttgaatgaatgaatatcgtttattttt 12653972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 15589817 - 15589779
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  15589817 tactctatcaatttgaatgaatgaatatcgtttattttt 15589779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 19402544 - 19402506
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  19402544 tactctatcaatttgaatgaatgaatatcgtttattttt 19402506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 23654678 - 23654716
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  23654678 tactctatcaatttgaatgaatgaatatcgtttattttt 23654716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 30813486 - 30813524
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  30813486 tactctatcaatttgaatgaatgaatatcgtttattttt 30813524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 31296967 - 31297108
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtat 105  Q
    |||||||||||| |||||| ||||||||| |||||||| |||||| ||   || | ||| ||| |||  |  |||||||||||| |||||| | |||| |    
T  31296967 ttttatcatattgtttgtaggcattttgtcgttgtatgctattaatttggatgatttgagtttgttcgcattttcaccctttacgtttttagcgatgt-t 31297065  T
Q  106 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |  | |||| || |||||| |||| ||||||||||||||||||    
T  31297066 gattctgatgtattctatcaatttgaatgaatgaatatcgttt 31297108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 31804622 - 31804660
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  31804622 tactctatcaatttaaatgaataaatatcgtttattttt 31804660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 35086281 - 35086247
Alignment:
Q  9 tatcatattatttgtaagcattttgttgttgtatg 43  Q
    |||||||||||||||| ||||||||||||||||||    
T  35086281 tatcatattatttgtaggcattttgttgttgtatg 35086247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 127811 - 127954
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| ||||||||  ||||  || |||||||||   |||||||| ||| |||| | ||||||| ||||| ||||||   |    
T  127811 ttagattttatcatattatttgtaggcattttgccgttg--tgctattaacttggttgctgtgagtttgttcacatattcaccttttacgttttta--ga 127906  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| |  || |||| ||||||||| |||| ||||||  ||||||||||    
T  127907 tgtttacatctgatgtactctatcaatttgaatgaacaaatatcgttt 127954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 528298 - 528249
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaa 50  Q
    |||| ||||||||||||||||||| | ||||||| |||||||| ||||||    
T  528298 ttagattttatcatattatttgtaggtattttgtcgttgtatgctattaa 528249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 13546643 - 13546554
Alignment:
Q  7 tttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||||||||||||||||| | ||||||| |||||||| |||||| ||  ||  || || ||| |||| ||| ||||||||||| ||||||    
T  13546643 tttatcatattatttgtaggtattttgtcgttgtatgctattaatttaagtattgcgagtttattcacagaatcaccctttacgttttta 13546554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14801969 - 14802050
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcac 82  Q
    |||| ||| ||||||||||||||| ||||||||  |||||||| |||||||||   |||||||| ||| |||  ||||||||    
T  14801969 ttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagattcac 14802050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1523550 - 1523602
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| ||||||||||||||||||| ||||||||| || | ||| |||||||||    
T  1523550 ttagattttatcatattatttgtaggcattttgtcgtggaatgctattaactt 1523602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 31852136 - 31852092
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 50  Q
    |||||||||||||||| ||  ||||||||||||||||| ||||||    
T  31852136 ttttatcatattatttatagacattttgttgttgtatgctattaa 31852092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 32802693 - 32802781
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttt 94  Q
    ||||||||||||||||||| | ||||| | |||||||| |||||| ||  ||||||||| |||  ||  | ||||||||||||| ||||    
T  32802693 ttttatcatattatttgtaggtattttatcgttgtatgatattaaattgggtgctgtgagtttgatcgcatattcaccctttacgtttt 32802781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 1921 - 1778
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||  ||| | ||| ||| |||  ||||||||||||||| |||||| | |    
T  1921 ttaggttttatcatattatttgtaggcattttgctgttgtatgttattaacttgggtgttatgagtttgttcgcagattcaccctttacgtttttagcga 1822  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||| ||||  ||||  | ||||||||||| ||||||||||||||    
T  1821 tgtttgtacctgatgcattctatcgatttgaatgaatgaatatc 1778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 65986 - 65843
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||||||  ||| | ||| ||| |||  |||||||||||||||||||||| | ||||     
T  65986 gttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgagtgttatgagtttgttcgcagattcaccctttacatttttaccgatgtt 65887  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    |||||||||| |||| | || |||| ||||||||||||| ||||    
T  65886 tgtatatgatgtactttttcaatttcaatgaatgaatattgttt 65843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 9987 - 9843
Alignment:
Q  4 ggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 103  Q
    ||||||||||||||||||||| |||||||   ||| |||| |||| ||||  ||||||||| ||| |||  ||||||||||||||| |||||| | ||||    
T  9987 ggttttatcatattatttgtaggcatttttccgttttatgctattgacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgt 9888  T
Q  104 atgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
     ||||| || | |||||||||||||| ||||||||||||| ||||    
T  9887 ttgtatctggtgtactctatcgatttgaatgaatgaatattgttt 9843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 34705 - 34668
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatg 43  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  34705 ttttatcatattatttgtaggcattttgttgttgtatg 34668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 71814 - 71675
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgta 104  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||||||||||| ||| || | ||||     
T  71814 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcggagattcaccctttacgtttctagcgatgtt 71715  T
Q  105 tgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||||| |||| ||||||||| |||| ||||| ||| ||||    
T  71714 tgtatctgatgtactctatcaatttgaatgactgagtatc 71675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 15633 - 15780
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||||||||| ||| |||  |||||||| |||||  |||||| | |    
T  15633 ttaggttttatcatattatttgtaggcattttgccgttatatgctattaacttgggtgctgtgagtttgttcgcagattcactctttatgtttttagcga 15732  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||  |||| ||||| |||||||| || |||| ||||||||||    
T  15733 tgtttgtaactgatgtactcaatcgatttgaaggaataaatatcgttt 15780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 32695 - 32562
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| ||||||||||||||||||| ||||||||| | |||||  |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | |    
T  32695 ttagattttatcatattatttgtaggcattttgtcgctgtatactattaacttgagtgttgtgagtttgttcccagattcaccctttacgtttttagcca 32596  T
Q  101 tgtatgtatatgatatactctatcgatttaaatg 134  Q
    ||| ||||| |||| |||||||||| ||| ||||    
T  32595 tgtttgtatctgatgtactctatcgttttgaatg 32562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 31222 - 31075
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||||||||||||| || ||||||||| ||||  || ||||| |||  ||||||||| ||| ||| | |||||| ||||||| |||| | | |    
T  31222 ttagattttatcatattatttataggcattttgtcgttgcttgctattagcttgggtgctgtgagtttgttcgttgattcatcctttacgttttaagcga 31123  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatcgttt 148  Q
    ||| ||||| |||| |||| |||| |||| ||||||||||||||||||    
T  31122 tgtttgtatctgatgtactatatcaatttgaatgaatgaatatcgttt 31075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 50921 - 51012
Alignment:
Q  5 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 96  Q
    |||||||||||||||||||| ||||||||   ||||||| |||||||||  ||||||||| ||| |||  ||||||||||||||||||||||    
T  50921 gttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacattttta 51012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 14813 - 14679
Alignment:
Q  7 tttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtatg 106  Q
    |||||||||||||||||| |||||||| | || |||| |||||||||  ||||||||| ||| |||  | ||||| |||||| |||||||   |||| ||    
T  14813 tttatcatattatttgtatgcattttgctattatatgctattaacttgggtgctgtgagtttgttcgcaaattcatcctttatatttttagtgatgtttg 14714  T
Q  107 tatatgatatactctatcgatttaaatgaatgaat 141  Q
    |||||||| |||| |||| |||| |||||||||||    
T  14713 tatatgatgtactttatcaatttgaatgaatgaat 14679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 1485 - 1613
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||||||||||||||||||||||| ||||||||  ||| |||| |||||||||   || ||||| ||| ||   ||||||||||||||| |||||| | |    
T  1485 ttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttggatgttgtgagtttgtttgcagattcaccctttacgtttttagcga 1584  T
Q  101 tgtatgtatatgatatactctatcgattt 129  Q
    ||| ||||| |||| ||||||||| ||||    
T  1585 tgtttgtatctgatgtactctatcaattt 1613  T

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Target: scaffold0049 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 71248 - 71105
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa 100  Q
    |||| |||||| |||||||||||| |||||||||||||||||| |||||||||  ||| ||| | ||| ||  |||||| | ||||||| |||||| | |    
T  71248 ttagattttattatattatttgtaggcattttgttgttgtatgctattaacttgggtgttgtaagtttgtttgtagattaatcctttacgtttttagcga 71149  T
Q  101 tgtatgtatatgatatactctatcgatttaaatgaatgaatatc 144  Q
    ||| ||||| | ||  |||||||| | || ||||||||||||||    
T  71148 tgtttgtatttaattgactctatcaaattgaatgaatgaatatc 71105  T

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Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 92439 - 92357
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 88  Q
    |||||||||||| |||||| |||||||||||||| ||  |||||||||  ||| ||||| ||| |||| ||||||||||||||    
T  92439 ttttatcatattgtttgtaggcattttgttgttgcatactattaacttaagtgatgtgagtttgttcaaagattcacccttta 92357  T

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Target: scaffold0039 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 93253 - 93341
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttt 94  Q
    |||||||||||| |||||| ||||||||||||||| || |||||||||  ||||| |||  || |||| ||||||||| ||||| ||||    
T  93253 ttttatcatattgtttgtaggcattttgttgttgtgtgctattaacttgggtgctatgaacttgttcacagattcaccatttacgtttt 93341  T

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Target: scaffold0603 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 154
Target Start/End: Original strand, 7862 - 8021
Alignment:
Q  7 tttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctt-tacatttttatcaatgta- 104  Q
    |||||||||||||||||| | |||||| | |||||||||||||||||  ||| ||||| ||| |||  | |||||||||| ||| |||||| ||||||      
T  7862 tttatcatattatttgtagggattttgctattgtatgttattaacttgggtgttgtgagtttgttcgcatattcacccttgtacgtttttagcaatgtta 7961  T
Q  105 ----------tgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
              ||||| |||| ||||||||| |||| |||||||||||||||||| |||||    
T  7962 aacaagttattgtatttgatgtactctatcaatttgaatgaatgaatatcgttttttttt 8021  T

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Target: scaffold0064 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 19025 - 18938
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttt 94  Q
    ||||||||||||||||||| ||||||||  |||||||  |||||| ||| ||||| ||| ||| ||| || |||||||||||| |||||    
T  19025 ttttatcatattatttgtatgcattttgccgttgtatactattaa-tttggtgctatgaatttattcgtaaattcaccctttagatttt 18938  T

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Target: scaffold0056 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 74593 - 74645
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatat 168  Q
    ||||||||| |||||||| |||||||||||||||||||| | | |||||||||    
T  74593 tactctatcaatttaaataaatgaatatcgtttatttttgtcaaaaaaaatat 74645  T

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Target: scaffold0536 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 3324 - 3362
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  3324 tactctatcaatttgaatgaatgaatatcgtttattttt 3362  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 27018 - 26936
Alignment:
Q  6 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 88  Q
    |||| ||||||||||||||  ||||||||| || |||| |||||||||  ||||||||| ||| ||| || ||||| ||||||    
T  27018 ttttctcatattatttgtagccattttgttattatatgctattaacttgcgtgctgtgagtttgttcgtatattcatccttta 26936  T

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Target: scaffold0155 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 35504 - 35542
Alignment:
Q  116 tactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  35504 tactctatcaatttgaatgaatgaatatcgtttattttt 35542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 11264 - 11222
Alignment:
Q  112 gatatactctatcgatttaaatgaatgaatatcgtttattttt 154  Q
    ||||||||||||| |||||||||||| |||||| |||||||||    
T  11264 gatatactctatcaatttaaatgaattaatatcatttattttt 11222  T

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Target: scaffold0888 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 1626 - 1533
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttt 94  Q
    |||| ||||||||||||||||||| ||||||| | ||| |||| |||||| |||  || ||||| ||| |||  ||||||||||| ||| ||||    
T  1626 ttagattttatcatattatttgtaggcattttatcgttatatgctattaattttgatgatgtgagtttgttcgcagattcaccctatacgtttt 1533  T

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Target: scaffold0128 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36966 - 37018
Alignment:
Q  1 ttaggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 53  Q
    |||| ||||||||||||||||||| | |||||| |||| |||| |||||||||    
T  36966 ttagattttatcatattatttgtaggtattttgatgttttatgctattaactt 37018  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 201774 - 201730
Alignment:
Q  111 tgatatactctatcgatttaaatgaatgaatatcgtttattttta 155  Q
    |||| ||||||||| ||||||||||||| ||||| ||||||||||    
T  201774 tgatttactctatcaatttaaatgaatgtatatcatttattttta 201730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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