View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9795A_low_91 (Length: 339)
Name: NF9795A_low_91
Description: NF9795A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9795A_low_91 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 21 - 334
Target Start/End: Complemental strand, 7654253 - 7653940
Alignment:
| Q |
21 |
agccttaacatttgaggacaaacagaactgaccaagtttatttttaatgcattttagtttcaaaataatatagtggcgatgcaatggaatgagtgtgata |
120 |
Q |
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| T |
7654253 |
agccttaacatttgaggacaaacagaactgaccaagtttatttttaatgcattttagtttcaaaataatatagtggcgatgcaatggaatgagtgtgata |
7654154 |
T |
|
| Q |
121 |
tatattataaattgtgttgtgacatgagtaaggagacattttgtatacgagtgttagaaaagaaaataatgattggtagccacatatactttcatattaa |
220 |
Q |
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| T |
7654153 |
tatattataaattgtgttgtgacatgagtaaggagacattttgtatacgagtgttagaaaagtaaatcatgattgctaatcacatatactttcatattaa |
7654054 |
T |
|
| Q |
221 |
tcatcaatgtatcaatagtatccttcaagtgagtttcttgcacaagatggnnnnnnnnnnnnnnnnnnggtttctaagatgtgtcttgcacaagaagtaa |
320 |
Q |
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||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||| |||| ||||||||||||||||| |
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| T |
7654053 |
tcatcaatgtatcaataatatccttcaagtgggtttcttgcacaagatggttttcttttttactttttggtttctaatatgtttcttgcacaagaagtaa |
7653954 |
T |
|
| Q |
321 |
tcctattcgagata |
334 |
Q |
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|||||||||||||| |
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| T |
7653953 |
tcctattcgagata |
7653940 |
T |
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