View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9800_high_5 (Length: 362)

Name: NF9800_high_5
Description: NF9800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9800_high_5
NF9800_high_5
[»] chr5 (6 HSPs)
chr5 (1-76)||(1716492-1716567)
chr5 (1-77)||(3643631-3643707)
chr5 (1-68)||(7524968-7525035)
chr5 (1-64)||(4103249-4103312)
chr5 (1-61)||(19261156-19261216)
chr5 (1-66)||(16037861-16037925)
[»] chr4 (12 HSPs)
chr4 (1-76)||(11652432-11652507)
chr4 (1-76)||(49106569-49106644)
chr4 (1-76)||(50077239-50077314)
chr4 (1-71)||(49108673-49108743)
chr4 (1-68)||(3461182-3461249)
chr4 (1-67)||(26984707-26984773)
chr4 (1-67)||(26998780-26998846)
chr4 (6-67)||(48205832-48205893)
chr4 (1-66)||(41013586-41013651)
chr4 (1-40)||(21503706-21503745)
chr4 (8-61)||(6431957-6432010)
chr4 (26-63)||(34481154-34481191)
[»] chr2 (22 HSPs)
chr2 (1-76)||(8979314-8979389)
chr2 (1-76)||(9026778-9026853)
chr2 (1-71)||(8984690-8984760)
chr2 (1-71)||(9008018-9008088)
chr2 (6-76)||(30732000-30732070)
chr2 (1-71)||(32918077-32918147)
chr2 (1-71)||(43850046-43850116)
chr2 (1-78)||(9023437-9023514)
chr2 (1-69)||(2841057-2841125)
chr2 (1-76)||(8973304-8973379)
chr2 (1-76)||(9032045-9032120)
chr2 (1-72)||(30733984-30734055)
chr2 (1-76)||(8988447-8988522)
chr2 (1-76)||(8992140-8992215)
chr2 (7-66)||(19232445-19232504)
chr2 (6-68)||(9020847-9020909)
chr2 (2-76)||(9030390-9030464)
chr2 (1-61)||(10763918-10763978)
chr2 (13-76)||(9016485-9016548)
chr2 (1-66)||(6471749-6471813)
chr2 (1-64)||(35701893-35701956)
chr2 (30-65)||(39814115-39814150)
[»] chr8 (12 HSPs)
chr8 (1-76)||(41841192-41841267)
chr8 (1-75)||(40054305-40054379)
chr8 (1-71)||(44878980-44879050)
chr8 (1-71)||(44880871-44880941)
chr8 (6-72)||(10944444-10944510)
chr8 (1-66)||(37679757-37679822)
chr8 (1-68)||(37682057-37682124)
chr8 (1-78)||(42555123-42555200)
chr8 (1-51)||(44582870-44582920)
chr8 (27-71)||(42872516-42872560)
chr8 (1-76)||(42220886-42220960)
chr8 (1-76)||(42092013-42092087)
[»] chr6 (4 HSPs)
chr6 (1-76)||(10791692-10791767)
chr6 (1-76)||(10795930-10796005)
chr6 (1-68)||(30521242-30521309)
chr6 (1-66)||(8875691-8875756)
[»] chr1 (20 HSPs)
chr1 (1-76)||(14654380-14654455)
chr1 (1-76)||(14664171-14664246)
chr1 (1-76)||(14669749-14669824)
chr1 (1-76)||(14706080-14706155)
chr1 (1-76)||(14708570-14708645)
chr1 (1-76)||(28366239-28366314)
chr1 (1-76)||(33988062-33988137)
chr1 (1-71)||(14674478-14674548)
chr1 (1-71)||(14676629-14676699)
chr1 (1-71)||(14679856-14679926)
chr1 (1-71)||(14683747-14683817)
chr1 (6-76)||(14716283-14716353)
chr1 (1-71)||(38175570-38175640)
chr1 (1-68)||(14652525-14652592)
chr1 (1-68)||(14662316-14662383)
chr1 (1-72)||(14667151-14667222)
chr1 (1-71)||(14681596-14681666)
chr1 (1-62)||(37422175-37422236)
chr1 (1-65)||(11872521-11872585)
chr1 (1-71)||(28698550-28698620)
[»] chr3 (1 HSPs)
chr3 (20-66)||(15758562-15758608)
[»] chr7 (1 HSPs)
chr7 (1-62)||(8128149-8128210)


Alignment Details
Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1716492 - 1716567
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1716492 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 1716567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 3643707 - 3643631
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagt 77  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  3643707 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgaatttaaagt 3643631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7525035 - 7524968
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatga 68  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7525035 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatga 7524968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4103312 - 4103249
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggt 64  Q
    |||| |||||||||||||||||||| |||||||||||||||||| |||||| || |||||||||    
T  4103312 atcagatattaaactgataagaacagatactacacttgatcttaaccaaaatgctgagaaaggt 4103249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19261156 - 19261216
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaa 61  Q
    |||| ||||| ||| |||||||||||||| ||||||||||||||  |||||||| ||||||    
T  19261156 atcagatatttaacggataagaacatatattacacttgatcttaatcaaaaggctgagaaa 19261216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16037925 - 16037861
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtat 66  Q
    ||||||||||||  | ||||||||| |||||||||||||||||||  ||| |||||||||| ||||    
T  16037925 atcaaatattaagataataagaacaaatactacacttgatcttag-aaaacggccgagaaaagtat 16037861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 11652432 - 11652507
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11652432 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 11652507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 49106569 - 49106644
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  49106569 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 49106644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 50077239 - 50077314
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50077239 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 50077314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 49108673 - 49108743
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 71  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  49108673 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 49108743  T

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Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3461182 - 3461249
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatga 68  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3461182 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatga 3461249  T

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Target: chr4; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26984707 - 26984773
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatg 67  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26984707 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatg 26984773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26998780 - 26998846
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatg 67  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26998780 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatg 26998846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 48205893 - 48205832
Alignment:
Q  6 atattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatg 67  Q
    |||||||| | ||||||||| ||||||||||| |||||||| ||||||||||||||||||||    
T  48205893 atattaaattaataagaacagatactacacttaatcttagctaaaaggccgagaaaggtatg 48205832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41013586 - 41013651
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtat 66  Q
    |||| ||||||||| |||||||||||||| || |||| |||||| |||||||||||||||| ||||    
T  41013586 atcagatattaaacggataagaacatatattatacttaatcttaaccaaaaggccgagaaaagtat 41013651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21503745 - 21503706
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgat 40  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  21503745 atcagatattaaactgataagaacagatactacacttgat 21503706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 6431957 - 6432010
Alignment:
Q  8 attaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaa 61  Q
    |||||||| ||||||| | |||||| || ||||||||||||| |||||||||||    
T  6431957 attaaactaataagaagagatactaaacctgatcttagccaataggccgagaaa 6432010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 34481154 - 34481191
Alignment:
Q  26 tatactacacttgatcttagccaaaaggccgagaaagg 63  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  34481154 tatactacactcgatcttagccaaaaggctgagaaagg 34481191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8979389 - 8979314
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8979389 atcaaatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 8979314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9026853 - 9026778
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9026853 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 9026778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8984760 - 8984690
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 71  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8984760 atcaaatattaaactaataagaacaaatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 8984690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9008088 - 9008018
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 71  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9008088 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 9008018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 30732070 - 30732000
Alignment:
Q  6 atattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30732070 atattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 30732000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32918147 - 32918077
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 71  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32918147 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 32918077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 43850116 - 43850046
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 71  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43850116 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 43850046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9023514 - 9023437
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagtt 78  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9023514 atcagatattaaactaataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagtt 9023437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2841057 - 2841125
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgag 69  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2841057 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgag 2841125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8973379 - 8973304
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8973379 atcagatattaaactaataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 8973304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9032120 - 9032045
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  9032120 atcagatattaaactgataagaacagatactacacttgatcttaaccaaaaggccgagaaaggtatgagttgaaag 9032045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 30734055 - 30733984
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtta 72  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  30734055 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtataagtta 30733984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8988522 - 8988447
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||| |||| ||||    
T  8988522 atcaaatattaaactgataagaacaaatactacacttgatcttcgccaaaaggccaagaatggtataagttgaaag 8988447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8992215 - 8992140
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| ||||| |||| |||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||    
T  8992215 atcagatattgaactcataagaacatatactacacttgatcttagccaaaagactgagaaaggcatgagttaaaag 8992140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 19232445 - 19232504
Alignment:
Q  7 tattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtat 66  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  19232445 tattaaactgataagaacagatattacacttgatcttagccaaaaggccgagaaaggtat 19232504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 9020909 - 9020847
Alignment:
Q  6 atattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatga 68  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  9020909 atattaaattgataagaacagatactacacttgatcttagccaaaaggccgagaaatgtatga 9020847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 9030464 - 9030390
Alignment:
Q  2 tcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||  |||||||| ||||    
T  9030464 tcaaatattaaattgataagaacagatactacacttgatcttagccaaaaggccaagaaaaatatgagttgaaag 9030390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10763918 - 10763978
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaa 61  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  10763918 atcagatattaaactgataagaacatatactacacttgatcttagtcaaaagaccgagaaa 10763978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 9016548 - 9016485
Alignment:
Q  13 actgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    ||||||||||||| |||||||| |||||||||||||||||| |||  |||||||||||||||||    
T  9016548 actgataagaacagatactacatttgatcttagccaaaaggtcgaataaggtatgagttaaaag 9016485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6471749 - 6471813
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtat 66  Q
    |||| |||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  6471749 atcagatattaaactaataagaacatatactacactt-atcttagccaaaaggtcgaaaaaggtat 6471813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 35701956 - 35701893
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggt 64  Q
    ||||||||||||||| |||| |||| |||| |||||||||||||||||||| |  |||||||||    
T  35701956 atcaaatattaaactaataaaaacaaataccacacttgatcttagccaaaaagttgagaaaggt 35701893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 39814150 - 39814115
Alignment:
Q  30 ctacacttgatcttagccaaaaggccgagaaaggta 65  Q
    |||||||||||| |||||||||||||||||||||||    
T  39814150 ctacacttgatcatagccaaaaggccgagaaaggta 39814115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 41841192 - 41841267
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41841192 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 41841267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 40054379 - 40054305
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaa 75  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40054379 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgaattaaaa 40054305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 44879050 - 44878980
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 71  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44879050 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 44878980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44880871 - 44880941
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 71  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44880871 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 44880941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 10944444 - 10944510
Alignment:
Q  6 atattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtta 72  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  10944444 atattaaactgataagaacagatactacacttgatcttagccaaaaggtcgagaaaggtatgagtta 10944510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37679822 - 37679757
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtat 66  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37679822 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtat 37679757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 37682124 - 37682057
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatga 68  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  37682124 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaatgtatga 37682057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42555123 - 42555200
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagtt 78  Q
    |||||||||||||||||||| |||| || || ||||||||||||||||||||  | ||||||||||||||| ||||||    
T  42555123 atcaaatattaaactgataaaaacagattctgcacttgatcttagccaaaagatcaagaaaggtatgagttgaaagtt 42555200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44582920 - 44582870
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaa 51  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  44582920 atcagatattaaactgataagaacagatactacacttgatcttagccaaaa 44582870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 42872516 - 42872560
Alignment:
Q  27 atactacacttgatcttagccaaaaggccgagaaaggtatgagtt 71  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  42872516 atactacacttaatcttagccaaaaggccgagaaaggtatgagtt 42872560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 42220886 - 42220960
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||| ||||||| | |||||||||||||||||||||||||| |||| ||| ||||||||| ||||    
T  42220886 atcagatattaaactaataagaa-agatactacacttgatcttagccaaaagaccgaaaaatgtatgagttgaaag 42220960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42092087 - 42092013
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||| ||||||| || |||| ||||||||  ||||||||||||||| ||||    
T  42092087 atcagatattaaactgataagaacaaatattacacttaattttag-caaaaggcaaagaaaggtatgagtttaaag 42092013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 6e-28; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 10791692 - 10791767
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10791692 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 10791767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 10795930 - 10796005
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10795930 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 10796005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 30521309 - 30521242
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatga 68  Q
    |||| |||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  30521309 atcagatattaaactgataagaacagatactacacttgatctcagccaaaaggtcgagaaaggtatga 30521242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8875756 - 8875691
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtat 66  Q
    |||| |||||||| ||||||||||| ||| |||||||||||||||||||||||||| |||| ||||    
T  8875756 atcagatattaaattgataagaacagatattacacttgatcttagccaaaaggccgggaaatgtat 8875691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 6e-28; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 14654380 - 14654455
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14654380 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 14654455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 14664171 - 14664246
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14664171 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 14664246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 14669749 - 14669824
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14669749 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 14669824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 14706155 - 14706080
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14706155 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 14706080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 14708645 - 14708570
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14708645 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 14708570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 28366239 - 28366314
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28366239 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 28366314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 33988137 - 33988062
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33988137 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 33988062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14674548 - 14674478
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 71  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14674548 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 14674478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14676699 - 14676629
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 71  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14676699 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 14676629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14679926 - 14679856
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 71  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14679926 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 14679856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14683817 - 14683747
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 71  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14683817 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 14683747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 14716353 - 14716283
Alignment:
Q  6 atattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaag 76  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14716353 atattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaag 14716283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 38175570 - 38175640
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 71  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38175570 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 38175640  T

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Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14652592 - 14652525
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatga 68  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14652592 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatga 14652525  T

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Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14662383 - 14662316
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatga 68  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14662383 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatga 14662316  T

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Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14667151 - 14667222
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtta 72  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14667151 atcagatattaaactaataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtta 14667222  T

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Target: chr1; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14681666 - 14681596
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 71  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  14681666 atcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtataagtt 14681596  T

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Target: chr1; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37422236 - 37422175
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaag 62  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37422236 atcagatattaaactgataagaacatatgctacacttgatcttagccaaaaggccgagaaag 37422175  T

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Target: chr1; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11872521 - 11872585
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggta 65  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  11872521 atcatatattaaactgataagaacagatagtacacttgatcttagtcaaaaggccgagaaaggta 11872585  T

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Target: chr1; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 28698620 - 28698550
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 71  Q
    ||||||||||||| |||||| || |||||||||| ||||||||||||||||| |||||||| |||||||||    
T  28698620 atcaaatattaaattgataaaaatatatactacatttgatcttagccaaaagaccgagaaatgtatgagtt 28698550  T

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Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 15758562 - 15758608
Alignment:
Q  20 agaacatatactacacttgatcttagccaaaaggccgagaaaggtat 66  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||||    
T  15758562 agaacagatattacacttgatcttagccaaaaggctgagaaaggtat 15758608  T

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Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8128210 - 8128149
Alignment:
Q  1 atcaaatattaaactgataagaacatatactacacttgatcttagccaaaaggccgagaaag 62  Q
    |||| |||||||||| | ||||||||||||||||||| |||||| |||||||  ||||||||    
T  8128210 atcatatattaaactaaaaagaacatatactacacttaatcttaaccaaaagaacgagaaag 8128149  T

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