View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9802_high_16 (Length: 249)

Name: NF9802_high_16
Description: NF9802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9802_high_16
NF9802_high_16
[»] scaffold0009 (2 HSPs)
scaffold0009 (133-215)||(225437-225519)
scaffold0009 (127-201)||(108543-108617)
[»] chr7 (23 HSPs)
chr7 (133-218)||(11840447-11840532)
chr7 (133-218)||(21600970-21601055)
chr7 (133-218)||(39651148-39651233)
chr7 (133-215)||(29467753-29467835)
chr7 (133-218)||(39276615-39276700)
chr7 (131-218)||(17169024-17169111)
chr7 (133-215)||(3791481-3791563)
chr7 (161-218)||(9143506-9143563)
chr7 (133-218)||(21670792-21670877)
chr7 (133-218)||(48529933-48530018)
chr7 (153-218)||(49146122-49146187)
chr7 (133-201)||(44804522-44804590)
chr7 (147-218)||(29684113-29684184)
chr7 (153-206)||(688085-688138)
chr7 (133-218)||(27737741-27737826)
chr7 (147-218)||(34872185-34872256)
chr7 (147-218)||(35156995-35157066)
chr7 (153-218)||(4848370-4848436)
chr7 (153-215)||(24684636-24684698)
chr7 (153-218)||(31899985-31900050)
chr7 (147-201)||(19052320-19052375)
chr7 (153-211)||(46197439-46197497)
chr7 (133-177)||(7857049-7857093)
[»] chr4 (33 HSPs)
chr4 (133-218)||(3821198-3821283)
chr4 (133-218)||(39716717-39716802)
chr4 (133-218)||(3757728-3757813)
chr4 (131-218)||(13171625-13171712)
chr4 (133-218)||(50119957-50120042)
chr4 (133-201)||(51347490-51347558)
chr4 (135-218)||(15704115-15704198)
chr4 (145-218)||(30529278-30529351)
chr4 (133-218)||(35498532-35498617)
chr4 (147-218)||(17730449-17730520)
chr4 (135-218)||(52799029-52799112)
chr4 (136-218)||(24547336-24547418)
chr4 (133-215)||(24948289-24948371)
chr4 (133-215)||(53991554-53991636)
chr4 (153-206)||(5752473-5752526)
chr4 (153-218)||(12682755-12682820)
chr4 (133-218)||(20588564-20588649)
chr4 (133-201)||(29712371-29712440)
chr4 (133-218)||(36743201-36743286)
chr4 (153-218)||(46104201-46104266)
chr4 (133-201)||(35716315-35716383)
chr4 (133-215)||(39406234-39406316)
chr4 (129-215)||(578607-578693)
chr4 (153-215)||(8956938-8957000)
chr4 (153-215)||(8986910-8986972)
chr4 (153-211)||(35833420-35833478)
chr4 (153-215)||(37349808-37349870)
chr4 (153-218)||(2116111-2116176)
chr4 (154-218)||(16896008-16896072)
chr4 (133-185)||(47560251-47560303)
chr4 (133-215)||(43021894-43021976)
chr4 (153-201)||(9888906-9888954)
chr4 (153-215)||(50033703-50033764)
[»] chr1 (23 HSPs)
chr1 (126-218)||(47134699-47134791)
chr1 (126-218)||(46626324-46626416)
chr1 (133-218)||(16300391-16300476)
chr1 (133-215)||(33075659-33075741)
chr1 (133-218)||(1367293-1367378)
chr1 (133-218)||(52306071-52306156)
chr1 (127-218)||(17364603-17364694)
chr1 (133-215)||(22198910-22198992)
chr1 (133-218)||(4890100-4890185)
chr1 (133-218)||(29188300-29188385)
chr1 (133-218)||(33359702-33359787)
chr1 (133-215)||(29844884-29844966)
chr1 (133-215)||(38894757-38894839)
chr1 (153-218)||(5426238-5426303)
chr1 (133-218)||(19322344-19322429)
chr1 (133-201)||(1826795-1826863)
chr1 (138-215)||(10766193-10766270)
chr1 (133-218)||(19400733-19400818)
chr1 (147-205)||(10698131-10698189)
chr1 (133-215)||(42678376-42678458)
chr1 (162-218)||(50557858-50557913)
chr1 (153-201)||(28570747-28570795)
chr1 (131-201)||(43116048-43116118)
[»] chr5 (17 HSPs)
chr5 (133-218)||(3088031-3088116)
chr5 (133-218)||(25698717-25698802)
chr5 (133-218)||(30140504-30140589)
chr5 (133-218)||(33709813-33709898)
chr5 (133-218)||(36886968-36887053)
chr5 (133-218)||(41689277-41689362)
chr5 (147-218)||(30754425-30754496)
chr5 (133-218)||(17643385-17643470)
chr5 (154-217)||(12422345-12422408)
chr5 (133-215)||(12592471-12592553)
chr5 (153-215)||(6305452-6305514)
chr5 (134-217)||(42977833-42977913)
chr5 (153-215)||(43138549-43138611)
chr5 (133-190)||(26602196-26602253)
chr5 (133-218)||(34715605-34715683)
chr5 (154-211)||(43352943-43353000)
chr5 (153-201)||(754461-754509)
[»] chr2 (14 HSPs)
chr2 (133-218)||(10050189-10050274)
chr2 (133-218)||(28607223-28607308)
chr2 (126-218)||(2952752-2952844)
chr2 (129-215)||(17836965-17837051)
chr2 (133-218)||(9545775-9545860)
chr2 (129-215)||(9920912-9920998)
chr2 (133-215)||(32677186-32677268)
chr2 (133-218)||(24520868-24520953)
chr2 (135-215)||(18096495-18096575)
chr2 (142-218)||(19486200-19486276)
chr2 (133-218)||(4292782-4292867)
chr2 (133-218)||(10876571-10876654)
chr2 (152-218)||(19486111-19486177)
chr2 (142-218)||(42781022-42781098)
[»] chr6 (14 HSPs)
chr6 (131-201)||(4897511-4897581)
chr6 (133-218)||(15045546-15045631)
chr6 (133-218)||(1218520-1218605)
chr6 (133-218)||(24443929-24444014)
chr6 (151-218)||(9981259-9981326)
chr6 (153-218)||(4107976-4108041)
chr6 (153-206)||(6969307-6969360)
chr6 (133-218)||(9737752-9737837)
chr6 (133-218)||(18323837-18323922)
chr6 (161-218)||(28573828-28573885)
chr6 (154-211)||(34316974-34317031)
chr6 (166-218)||(25529276-25529328)
chr6 (154-218)||(33328277-33328341)
chr6 (154-218)||(35133197-35133260)
[»] scaffold0057 (1 HSPs)
scaffold0057 (133-218)||(20579-20664)
[»] chr8 (24 HSPs)
chr8 (133-218)||(36776406-36776491)
chr8 (128-218)||(24053911-24054001)
chr8 (133-218)||(18378802-18378887)
chr8 (147-218)||(25346050-25346121)
chr8 (133-215)||(40587695-40587778)
chr8 (152-218)||(41972977-41973043)
chr8 (131-218)||(40616094-40616181)
chr8 (153-218)||(4466420-4466485)
chr8 (153-218)||(7389220-7389285)
chr8 (154-218)||(25620714-25620778)
chr8 (147-218)||(41534248-41534319)
chr8 (153-215)||(8760723-8760785)
chr8 (153-218)||(25616497-25616563)
chr8 (153-215)||(25836268-25836330)
chr8 (137-218)||(9472158-9472238)
chr8 (126-204)||(41152663-41152743)
chr8 (161-218)||(45435020-45435077)
chr8 (154-218)||(44389005-44389069)
chr8 (147-218)||(42245732-42245803)
chr8 (153-215)||(1942811-1942873)
chr8 (153-201)||(8162792-8162840)
chr8 (164-215)||(32844182-32844233)
chr8 (126-211)||(19243230-19243315)
chr8 (126-211)||(19316414-19316499)
[»] chr3 (21 HSPs)
chr3 (133-218)||(22519192-22519276)
chr3 (152-218)||(19895645-19895711)
chr3 (130-215)||(11955528-11955613)
chr3 (133-218)||(29530561-29530646)
chr3 (145-218)||(19368941-19369014)
chr3 (129-218)||(26102150-26102239)
chr3 (131-218)||(28981817-28981904)
chr3 (156-218)||(26777850-26777912)
chr3 (153-206)||(8393585-8393638)
chr3 (133-218)||(8528103-8528188)
chr3 (153-206)||(18682511-18682564)
chr3 (136-201)||(35855209-35855274)
chr3 (153-218)||(53800521-53800586)
chr3 (133-201)||(22473646-22473714)
chr3 (147-218)||(55297343-55297414)
chr3 (153-215)||(4139350-4139412)
chr3 (132-213)||(9563227-9563308)
chr3 (133-213)||(33872207-33872287)
chr3 (154-218)||(40831926-40831990)
chr3 (154-218)||(11602164-11602228)
chr3 (162-211)||(2847341-2847390)
[»] scaffold0385 (1 HSPs)
scaffold0385 (135-215)||(8303-8383)
[»] scaffold0051 (1 HSPs)
scaffold0051 (153-218)||(62084-62149)
[»] scaffold0069 (1 HSPs)
scaffold0069 (133-204)||(11775-11846)
[»] scaffold0759 (1 HSPs)
scaffold0759 (153-206)||(5903-5956)
[»] scaffold0381 (1 HSPs)
scaffold0381 (153-201)||(9591-9639)


Alignment Details
Target: scaffold0009 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 225437 - 225519
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  225437 tatatacttatattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattggtt 225519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 108543 - 108617
Alignment:
Q  127 tctatatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaa 201  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||||||| ||  |||||||| ||||||||||    
T  108543 tctatatatatactaataagaaaagaaatgtcccttgaatttaccattttgtccccataaggggtaatttggtaa 108617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 11840532 - 11840447
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  11840532 tatatacttctattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattattaattggttgag 11840447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 21601055 - 21600970
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  21601055 tatatacttctattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattattaattggttgag 21600970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 39651233 - 39651148
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  39651233 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattactaattggttgag 39651148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 29467753 - 29467835
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  29467753 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 29467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 39276615 - 39276700
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||| ||||||||||||||| |||| ||||||    
T  39276615 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaaattacaaatttgttgag 39276700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 17169024 - 17169111
Alignment:
Q  131 tatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||| ||| | |||||||||||||||||| | ||||| ||||    
T  17169024 tatatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 17169111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 3791481 - 3791563
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||||||| ||||||||||||||  || |||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  3791481 tatatacttatattaaaagaaatgtcctatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 3791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 9143506 - 9143563
Alignment:
Q  161 ttgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  9143506 ttgaatttaccattttgcccctataaggggcaatttggtaaattactaatttgttgag 9143563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 21670877 - 21670792
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||| ||||||||| ||||| ||  ||||||||||||||| |||| ||||||    
T  21670877 tatatacttatattaaaagaaatgtcccttgaatttactattttgcccctataaaggataatttggtaaattacaaatttgttgag 21670792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 48530018 - 48529933
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||||| |||  ||||||||||||||||||| | ||||| ||||    
T  48530018 tatatacttatattaaaagaaatgtcctttgaaattaccattttgcccctattgggggcaatttggtaaattaattattggctgag 48529933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 49146187 - 49146122
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  49146187 aatgtccattgattttaccattttgcccctatgaggggcaatttggtaaattacaaattggttgag 49146122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 44804522 - 44804590
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaa 201  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||    
T  44804522 tatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaa 44804590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 29684184 - 29684113
Alignment:
Q  147 aaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||  |||||||||||||||    
T  29684184 aaaagaaatgtgccttgaatttaccattttacccctataaggggcaatttggtaatctactaattggttgag 29684113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 688085 - 688138
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattac 206  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  688085 aatgtcctttgaatttaccattttgcccctataaggggcaatttggtaaattac 688138  T

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Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 27737826 - 27737741
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||| ||  |||||||| |||| |||||||||||||||| ||| ||||| ||  |||||||||||||||||||||||||||    
T  27737826 tatatacttctataaaaagaaaagtcccttgaatttaccattttacccctataaaggataatttggtaaattactaattggttgag 27737741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 34872185 - 34872256
Alignment:
Q  147 aaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||  |||| ||||||||||    
T  34872185 aaaagaaatgtcctttgaacttaccattttgtccctataaggggcaatttggtaatctacttattggttgag 34872256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 35157066 - 35156995
Alignment:
Q  147 aaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||||||||||||  |||| || |||||||    
T  35157066 aaaagaaatgtcacttgaatttaccattttgcccctataaggggcaatttggtaatctacttatcggttgag 35156995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 4848370 - 4848436
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattac-taattggttgag 218  Q
    |||||||||||| ||||||||||||||| ||| ||||| |||||||||||||||  |||||||||||    
T  4848370 aatgtccattgattttaccattttgcccctatgaggggtaatttggtaaattacaaaattggttgag 4848436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 24684698 - 24684636
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||  ||||||||||||||||||  ||||||||||||||||||||  |||| |||||||    
T  24684698 aatgtcccatgaatttaccattttgcctctataaggggcaatttggtaatctacttattggtt 24684636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 31900050 - 31899985
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||| |||||||||| ||||||||| ||| ||||||||||||||| |||| | ||||| ||||    
T  31900050 aatgtcctttgaatttacaattttgcccctattaggggcaatttggtagattaattattggctgag 31899985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 19052375 - 19052320
Alignment:
Q  147 aaaagaaatgtccattgaatttaccattttg-cccatataaggggcaatttggtaa 201  Q
    |||||| ||||||||||||||| | |||||| ||||||| ||||||||||||||||    
T  19052375 aaaagagatgtccattgaatttccaattttgccccatatgaggggcaatttggtaa 19052320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 46197439 - 46197497
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaatt 211  Q
    |||||||||||| ||||||||||||||| ||  || ||||||||||||| | |||||||    
T  46197439 aatgtccattgattttaccattttgcccttaggagaggcaatttggtaattcactaatt 46197497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 7857093 - 7857049
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttg 177  Q
    |||||||| |||| ||||||||||||| ||||||||||| |||||    
T  7857093 tatatactaataagaaaagaaatgtcccttgaatttaccgttttg 7857049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 3821283 - 3821198
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3821283 tatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattactaattggttgag 3821198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 39716802 - 39716717
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||| | ||||||||||    
T  39716802 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggttgag 39716717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 3757728 - 3757813
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  |||| ||||||||||    
T  3757728 tatatactaataagaaaagaaatgttcattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 3757813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 13171625 - 13171712
Alignment:
Q  131 tatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||| |||| |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||  |||| ||||||||||    
T  13171625 tatatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 13171712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 50120042 - 50119957
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||| |||| ||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||  |||| ||||||||||    
T  50120042 tatatactaataagaaaaggaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 50119957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 51347490 - 51347558
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaa 201  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  51347490 tatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 51347558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 15704115 - 15704198
Alignment:
Q  135 tatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||  ||||| ||||| | || ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  15704115 tatacttatataaaaagtaatgttctttaaatttaccattttgcccctataaggggaaatttggtaaattactaattggttgag 15704198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 30529351 - 30529278
Alignment:
Q  145 ataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||  |||| ||||||||||    
T  30529351 ataaaagaaatatcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 30529278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 35498617 - 35498532
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||| |||  |||||||||| || ||||||||| |||||||||| ||||| || ||||||||||||||||||||||||||||    
T  35498617 tatatactaatataaaaagaaatggcccttgaatttatcattttgcccctataaaggacaatttggtaaattactaattggttgag 35498532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 17730449 - 17730520
Alignment:
Q  147 aaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||| | |||||||||||||||||| | ||||||||||||||||||||  |||||||||||||||    
T  17730449 aaaagaaatgtgctttgaatttaccattttgctcctataaggggcaatttggtaatctactaattggttgag 17730520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 52799029 - 52799112
Alignment:
Q  135 tatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||| |||||||||||||| || ||||||||||||| ||| ||| |||||||||||||||||||| | ||||| ||||    
T  52799029 tatacttatattaaaagaaatgtcctttaaatttaccattttacccctattaggggcaatttggtaaattaattattggctgag 52799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 24547336 - 24547418
Alignment:
Q  136 atacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||| |||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||  || | ||||||||||    
T  24547336 atactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaatctatttattggttgag 24547418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 24948371 - 24948289
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||| | ||||||||||||||||| ||  |||| |||||||    
T  24948371 tatatacttatataaaaagaaatgtcctttgaatttaccattttgctcctataaggggcaatttggaaatctacttattggtt 24948289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 53991636 - 53991554
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||||||| |||||||||||| |  || |||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  53991636 tatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 53991554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 5752473 - 5752526
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattac 206  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  5752473 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattac 5752526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 12682820 - 12682755
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||||||||||  |||||||||||    
T  12682820 aatgtccattgattttaccattttgcccctatgaggggcaatttggtaaattataaattggttgag 12682755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 20588564 - 20588649
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||| |||| ||||||||||||| ||||||| |||||||||||  ||||||||||||||||||||   ||| ||||||||||    
T  20588564 tatatactaataagaaaagaaatgtcccttgaattcaccattttgcctctataaggggcaatttggtaatccacttattggttgag 20588649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 29712371 - 29712440
Alignment:
Q  133 tatatacttataataaaa-gaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaa 201  Q
    |||||||||||| ||||| ||||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  29712371 tatatacttatattaaaaagaaatgtcccttaaatttaccattttgcccctataaggggcaatttggtaa 29712440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 36743286 - 36743201
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||| |||| ||||||||||||| || |||||||||||||| |  ||||||||||||||||||||  |||| ||||||||||    
T  36743286 tatatactaataagaaaagaaatgtcccttaaatttaccattttgtctctataaggggcaatttggtaatctacttattggttgag 36743201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 46104201 - 46104266
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||||  || ||||||||||||||||||||| |||||||||||    
T  46104201 aatgtccattgattttaccattttgccccaatgaggggcaatttggtaaattacaaattggttgag 46104266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 35716383 - 35716315
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaa 201  Q
    |||||||||||| |||||||||||| |  || |||||||||||||||| ||||||||||||||||||||    
T  35716383 tatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaa 35716315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 39406316 - 39406234
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    ||||||||||||  ||||||||||| | ||||||||||||||| |||| ||||||||| ||||||||||  |||| |||||||    
T  39406316 tatatacttatataaaaagaaatgttccttgaatttaccatttagcccctataaggggtaatttggtaatctacttattggtt 39406234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 578693 - 578607
Alignment:
Q  129 tatatatatacttataataaaagaaatgtc-cattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    ||||||||||  |||| ||||||||||||| |||||| ||||||||||||||| |||||||| |||||||||||  |||| |||||||    
T  578693 tatatatatatatatattaaaagaaatgtctcattga-tttaccattttgcccctataagggacaatttggtaatctacttattggtt 578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 8956938 - 8957000
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  8956938 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8957000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 8986910 - 8986972
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  8986910 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8986972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 35833478 - 35833420
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaatt 211  Q
    |||||||||||| ||||||||||||||| ||| |||||||||||||||| | |||||||    
T  35833478 aatgtccattgattttaccattttgcccctatgaggggcaatttggtaattcactaatt 35833420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 37349808 - 37349870
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  37349808 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 37349870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 2116111 - 2116176
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||| || ||  ||||||||||||||||||||  |||||||||||    
T  2116111 aatgtccattgattttaccattttgtccttaggaggggcaatttggtaaattataaattggttgag 2116176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 16896008 - 16896072
Alignment:
Q  154 atgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||| |||||||||| ||||||||| |||||||||| |||||||||  || ||||||||||||    
T  16896008 atgtcccttgaatttacaattttgcccttataaggggctatttggtaatctattaattggttgag 16896072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 47560303 - 47560251
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatata 185  Q
    |||||||||||| |||||| ||||||| |||||||||||||||||||| ||||    
T  47560303 tatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctata 47560251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 43021894 - 43021976
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||| |||| ||||||||||| | ||||||||||||| |||||  ||| ||| ||||||||||||  |||| |||||||    
T  43021894 tatatactaataagaaaagaaatgttccttgaatttaccatcttgcctctattaggtgcaatttggtaatctacttattggtt 43021976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 9888954 - 9888906
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaa 201  Q
    |||||||  ||||||||||||||||||| |||||||| |||||||||||    
T  9888954 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaa 9888906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 50033703 - 50033764
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||  ||||||||||||||||||| ||||| ||||||||||||||  |||| |||||||    
T  50033703 aatgtcctatgaatttaccattttgcccttataa-gggcaatttggtaatctacttattggtt 50033764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 4e-31; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 47134699 - 47134791
Alignment:
Q  126 atctatatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||| ||||||||||||  ||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47134699 atctatctatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattggttgag 47134791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 46626416 - 46626324
Alignment:
Q  126 atctatatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||  |||| ||||||||||    
T  46626416 atctatatatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 46626324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 16300391 - 16300476
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||  ||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  16300391 tatatacttatattaaaattaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaaattactaattggttgag 16300476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 33075741 - 33075659
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  33075741 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 33075659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 1367293 - 1367378
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||| | ||||| ||||    
T  1367293 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 1367378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 52306071 - 52306156
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||||  ||||||||| ||| || ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  52306071 tatatacttatataaaaagaaatatccctttaatttaccattttgcccctataaggggcaatttgataaattactaattggttgag 52306156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 218
Target Start/End: Complemental strand, 17364694 - 17364603
Alignment:
Q  127 tctatatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||| |||||||||||| |||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||| | ||||| ||||    
T  17364694 tctatctatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 17364603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 22198992 - 22198910
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||  |||| |||||||    
T  22198992 tatatacttatattaaaagaaatgtcccttgaatttatcattttgcccctataaggggcaatttggtaatctacttattggtt 22198910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 4890100 - 4890185
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||  ||| |||||||||||||||||||| | ||||| ||||    
T  4890100 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcctctattaggggcaatttggtaaattaattattggctgag 4890185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 29188385 - 29188300
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||| | |||||||||||||||||| | ||||| ||||    
T  29188385 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 29188300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 33359702 - 33359787
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||| | |||||||||||||||||| | ||||| ||||    
T  33359702 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 33359787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 29844966 - 29844884
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||||||| ||||||||||||||  || |||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  29844966 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 29844884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 38894757 - 38894839
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||| |||| |||  ||||||||||||||||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  38894757 tatatactaataagaaagtaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 38894839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 5426238 - 5426303
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| ||||||||||||||| || |||||||||||||||||||||| |||||||||||    
T  5426238 aatgtccattgattttaccattttgcccttagaaggggcaatttggtaaattacaaattggttgag 5426303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 19322429 - 19322344
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||| |||| |||| |||||||| |||||||||||||||||||| |||||||||||||||||||   |||| ||||||||||    
T  19322429 tatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtattctacttattggttgag 19322344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 1826795 - 1826863
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaa 201  Q
    |||||||||||| |||||| ||||||| ||||||||||||||||| |  ||||||||||||||||||||    
T  1826795 tatatacttatattaaaagtaatgtcccttgaatttaccattttggctctataaggggcaatttggtaa 1826863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 10766193 - 10766270
Alignment:
Q  138 acttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    ||||||| ||||||||||||||  || |||||||||||||||| |||||||| |||||||||||  |||| |||||||    
T  10766193 acttatattaaaagaaatgtcctatggatttaccattttgcccctataagggtcaatttggtaatctacttattggtt 10766270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 19400733 - 19400818
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||| |||| ||||   |||||| |||||||||||||||||||||||||||||| |||| |||||  || ||||||||||||    
T  19400733 tatatactaataagaaaatccatgtcccttgaatttaccattttgcccatataaggggtaattcggtaatctattaattggttgag 19400818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 10698189 - 10698131
Alignment:
Q  147 aaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaatta 205  Q
    |||||||||||||| | ||||||||||||||||| || |||||||| ||||||||||||    
T  10698189 aaaagaaatgtccaataaatttaccattttgcccctagaaggggcattttggtaaatta 10698131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 42678376 - 42678458
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    ||||||||||||  |||||||||||||  |||||||||||||||  || |||||||||||||||| |||  |||| |||||||    
T  42678376 tatatacttatataaaaagaaatgtcccatgaatttaccattttatccctataaggggcaatttgataatctacttattggtt 42678458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 50557858 - 50557913
Alignment:
Q  162 tgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||||||| || ||||||||||||||||||||  |||||||||||||||    
T  50557858 tgaatttaccattttgtcc-tataaggggcaatttggtaatctactaattggttgag 50557913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 28570747 - 28570795
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaa 201  Q
    |||||||  ||||||||||||||||||| |||||||| |||||||||||    
T  28570747 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaa 28570795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 201
Target Start/End: Original strand, 43116048 - 43116118
Alignment:
Q  131 tatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaa 201  Q
    |||||||||| |||  |||| | ||||||||||||||| | ||||||||| ||  ||||||||||||||||    
T  43116048 tatatatactaatataaaaatacatgtccattgaatttccaattttgcccctaggaggggcaatttggtaa 43116118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 3088116 - 3088031
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  3088116 tatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattattaattggttgag 3088031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 25698802 - 25698717
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||| | ||||||||||    
T  25698802 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggttgag 25698717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 30140504 - 30140589
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||| | ||| |||||||||||||||||||||||||||    
T  30140504 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggtaatttggtaaattactaattggttgag 30140589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 33709898 - 33709813
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||  ||||||| |||||||||||||||| ||| ||||| |||||||||||||||||| ||||||||||||    
T  33709898 tatatacttatattaaaattaatgtcccttgaatttaccattttacccctataaagggcaatttggtaaattagtaattggttgag 33709813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 36887053 - 36886968
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||  |||| |||| |||||    
T  36887053 tatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattgattgag 36886968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 41689277 - 41689362
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||| | |||||||||||||||||| | ||||| ||||    
T  41689277 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattatgggcaatttggtaaattaattattggctgag 41689362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 30754425 - 30754496
Alignment:
Q  147 aaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||  |||| ||||||||||    
T  30754425 aaaagaaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 30754496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 17643470 - 17643385
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||| |||| |||| |||||||| ||||||||| |||||||||| ||||||||||||||||||||  || | ||||||||||    
T  17643470 tatatactaataagaaaataaatgtcccttgaatttatcattttgcccttataaggggcaatttggtaatctatttattggttgag 17643385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 12422408 - 12422345
Alignment:
Q  154 atgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttga 217  Q
    |||||| |||| ||||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  12422408 atgtcctttgattttaccattttgcccctataaggggcaatttggtaatctactaattggttga 12422345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 12592553 - 12592471
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    ||||||||||||  |||||||||||||  ||||||||||| ||| ||| ||||||||||||||||||||  |||| |||||||    
T  12592553 tatatacttatataaaaagaaatgtcccatgaatttaccagtttacccctataaggggcaatttggtaatctacttattggtt 12592471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 6305514 - 6305452
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  6305514 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 6305452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 42977913 - 42977833
Alignment:
Q  134 atatacttataataaaagaaa-tgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttga 217  Q
    ||||||||||| ||||||||| |||||||||   |||||||||||||| ||||||||||||||||||||  |||| |||||||||    
T  42977913 atatacttata-taaaagaaaatgtccattg---ttaccattttgcccctataaggggcaatttggtaatctacttattggttga 42977833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 43138611 - 43138549
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  43138611 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 43138549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 26602253 - 26602196
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataagggg 190  Q
    ||||||||||||  ||||||||||||| |||||||||||||||| ||| |||||||||    
T  26602253 tatatacttatataaaaagaaatgtcccttgaatttaccattttacccttataagggg 26602196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 34715605 - 34715683
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| ||||||||||||||       |||||||||||||| ||| |||||||||||||||||||| | ||||| ||||    
T  34715605 tatatacttatattaaaagaaatgtcc-------ttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 34715683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 43352943 - 43353000
Alignment:
Q  154 atgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaatt 211  Q
    ||||||||||||||| | |||||||| |||  |||||||||||||||||| |||||||    
T  43352943 atgtccattgaatttccaattttgcctataggaggggcaatttggtaaatcactaatt 43353000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 754509 - 754461
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaa 201  Q
    |||||||  ||||||||||||||||||| |||||||| |||||||||||    
T  754509 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaa 754461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 10050274 - 10050189
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  10050274 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttgataaattactaattggttgag 10050189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 28607223 - 28607308
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||    
T  28607223 tatatacttatattaaaataaatgtccattgaatttaccattttgtccctataaggggcaatttggtaaattacaaattggttgag 28607308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 2952752 - 2952844
Alignment:
Q  126 atctatatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||| | ||||| ||||    
T  2952752 atctatatatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 2952844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 17836965 - 17837051
Alignment:
Q  129 tatatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  17836965 tatatatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 17837051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 9545860 - 9545775
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||| | ||||| ||||    
T  9545860 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 9545775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 9920998 - 9920912
Alignment:
Q  129 tatatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||||||||||| ||||||||||||||  || |||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  9920998 tatatatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 9920912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 32677268 - 32677186
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  32677268 tatatacttatattaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 32677186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 24520868 - 24520953
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||||  ||||||||||||| |||||||||  ||||||||  ||||||| |||||||||||||||||||||||||||||    
T  24520868 tatatacttatataaaaagaaatgtcccttgaatttataattttgcctctataaggagcaatttggtaaattactaattggttgag 24520953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 18096495 - 18096575
Alignment:
Q  135 tatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    ||||||||||  ||||||||||||| |||||||||||||||||||| ||||||||| ||||||| |||||| |||||||||    
T  18096495 tatacttatataaaaagaaatgtcctttgaatttaccattttgcccctataaggggtaatttggcaaattattaattggtt 18096575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 19486200 - 19486276
Alignment:
Q  142 ataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||  |||| ||||||||||    
T  19486200 ataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 19486276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 4292867 - 4292782
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||| | ||| | |||||||||||||||||| | ||||| ||||    
T  4292867 tatatacttatattaaaagaaatgtcctttgaatttaccattttgctcctattaagggcaatttggtaaattaattattggctgag 4292782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 10876654 - 10876571
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||||||   ||||||||||||||||||  |||| ||||||||||    
T  10876654 tatatactaataagaaaagaaatgtcccttgaatttaccattttgccc--ctaaggggcaatttggtaatctacttattggttgag 10876571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 19486177 - 19486111
Alignment:
Q  152 aaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||| ||||||||||||| |||||||||| ||||||||||||||||||||  |||| ||||||||||    
T  19486177 aaatatccattgaatttatcattttgcccctataaggggcaatttggtaatctacttattggttgag 19486111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 42781022 - 42781098
Alignment:
Q  142 ataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||| ||||||||||||| ||||||||| ||||||| || | ||||||||||||||||||  || | ||||||||||    
T  42781022 ataagaaaagaaatgtcccttgaatttatcattttgtccctgtaaggggcaatttggtaatctatttattggttgag 42781098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 4897581 - 4897511
Alignment:
Q  131 tatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaa 201  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  4897581 tatatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 4897511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 15045631 - 15045546
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||| ||||||||||||||| |||| ||||||    
T  15045631 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaaattacaaatttgttgag 15045546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 1218520 - 1218605
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||| | |||||||||||||||||| | ||||| ||||    
T  1218520 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 1218605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 24443929 - 24444014
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||| | ||||| ||||    
T  24443929 tatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 24444014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 9981326 - 9981259
Alignment:
Q  151 gaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  9981326 gaaatgttcattgaatttaccattttacccctataaggggcaatttggtaaattgctaattggttgag 9981259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 4107976 - 4108041
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||| |||||||||||    
T  4107976 aatgtccattgattttaccatttttcccctatgaggggcaatttggtaaattacaaattggttgag 4108041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 6969360 - 6969307
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattac 206  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  6969360 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattac 6969307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 9737837 - 9737752
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||| || |||||||||||||||| |||  || | ||||||||||    
T  9737837 tatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttgataatctatttattggttgag 9737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 18323837 - 18323922
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||| |   |||||||||||||||| | ||||| ||||    
T  18323837 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaaaagcaatttggtaaattaattattggctgag 18323922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 28573885 - 28573828
Alignment:
Q  161 ttgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||| ||||||||||||||| ||  ||||||||||||||||||||| |||||||||||    
T  28573885 ttgattttaccattttgcccctaggaggggcaatttggtaaattacaaattggttgag 28573828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 34316974 - 34317031
Alignment:
Q  154 atgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaatt 211  Q
    ||||||||||| |||||| |||||||| ||  |||||||||||||||| |||||||||    
T  34316974 atgtccattgattttacctttttgcccctaagaggggcaatttggtaatttactaatt 34317031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 25529276 - 25529328
Alignment:
Q  166 tttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||| ||||||| | ||||||||||||||||||||  |||||||||||||||    
T  25529276 tttacgattttgctcctataaggggcaatttggtaatctactaattggttgag 25529328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 33328341 - 33328277
Alignment:
Q  154 atgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||| || ||||||||||||||| | || ||||||||||||||||   |||||||||||||||    
T  33328341 atgtcctttaaatttaccattttgctcctacaaggggcaatttggtagtctactaattggttgag 33328277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 35133197 - 35133260
Alignment:
Q  154 atgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||| || ||||||||||||||||  ||||| |||||||||| |||  |||||||||||||||    
T  35133197 atgtcctttaaatttaccattttgcctctataa-gggcaatttgataatctactaattggttgag 35133260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 20664 - 20579
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||| | ||||| ||||    
T  20664 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 20579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 36776406 - 36776491
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||  |||| ||||||||||    
T  36776406 tatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 36776491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 24053911 - 24054001
Alignment:
Q  128 ctatatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||| |||||||| |||| ||||||||||||| |||||||||||||||||| | ||||||||||||||||||||  |||| ||||||||||    
T  24053911 ctatctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctacttattggttgag 24054001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 18378887 - 18378802
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||||  ||| |||||||||||||||||||| | ||||||||||    
T  18378887 tatatacttatattaaaagaaatgtcctttgaatttatcattttgcctctattaggggcaatttggtaaattaattattggttgag 18378802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 25346050 - 25346121
Alignment:
Q  147 aaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||  |||| ||||||||||    
T  25346050 aaaagaaatgtccattgaatttaccattttgcctctataaggggcaatttggtaatctacttattggttgag 25346121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 40587778 - 40587695
Alignment:
Q  133 tatatactta-taataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  40587778 tatatacttaataagaaaataaatgtccattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 40587695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 41972977 - 41973043
Alignment:
Q  152 aaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  41972977 aaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctactaattggttgag 41973043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 40616181 - 40616094
Alignment:
Q  131 tatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||| |||| ||||   |||||| |||||||||||||||||| | |||||| |||||||||||||  |||||||||||||||    
T  40616181 tatatatactaataagaaaatccatgtcccttgaatttaccattttgctcctataagaggcaatttggtaatctactaattggttgag 40616094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 4466485 - 4466420
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| ||||||||||| ||| ||  ||||||||||||||||||||| |||||||||||    
T  4466485 aatgtccattgattttaccattttacccttaggaggggcaatttggtaaattacaaattggttgag 4466420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 7389220 - 7389285
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||||||||||||||  |  ||||||||||||||||||||| |||||||||||    
T  7389220 aatgtccattgattttaccattttgccccaaggaggggcaatttggtaaattacaaattggttgag 7389285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 25620778 - 25620714
Alignment:
Q  154 atgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||| ||||| ||||||||| ||| ||||||||||||||||||||| |||| ||||||    
T  25620778 atgtccattgattttactattttgcccctatgaggggcaatttggtaaattacaaattagttgag 25620714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 41534319 - 41534248
Alignment:
Q  147 aaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||| ||||||||  ||||||||||||||||| | |||||||| ||||||| ||||||| ||||||||||||    
T  41534319 aaaataaatgtcccatgaatttaccattttgctcctataagggacaatttgataaattattaattggttgag 41534248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 8760723 - 8760785
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  8760723 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8760785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 25616563 - 25616497
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattac-taattggttgag 218  Q
    |||||||||||| ||||||||||||||| ||  |||||||||||||||||||||  |||||||||||    
T  25616563 aatgtccattgattttaccattttgcccttaagaggggcaatttggtaaattacaaaattggttgag 25616497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 25836330 - 25836268
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  25836330 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 25836268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 9472158 - 9472238
Alignment:
Q  137 tacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||| |||| ||||||||||||| ||||| |||||||||||||  ||||| ||||||||||||||  |||| ||||||||||    
T  9472158 tactaataagaaaagaaatgtcccttgaaattaccattttgcctctataa-gggcaatttggtaatctacttattggttgag 9472238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 41152663 - 41152743
Alignment:
Q  126 atctatatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggc--aatttggtaaatt 204  Q
    |||||| ||||||||||||  ||||||||||||| ||||||||||||||||| || ||| |||| |  |||||||||||||    
T  41152663 atctatctatatacttatataaaaagaaatgtcccttgaatttaccattttgtccctatcagggtcctaatttggtaaatt 41152743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 45435020 - 45435077
Alignment:
Q  161 ttgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||||||||||| ||||||||||||||||||||  |||||| || |||||    
T  45435020 ttgaatttaccattttgcccttataaggggcaatttggtaatctactaaatgattgag 45435077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 44389069 - 44389005
Alignment:
Q  154 atgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||| |||||||||||||||| ||| ||||||||| ||||||||||  || ||||||||||||    
T  44389069 atgtcccttgaatttaccatttttcccttataaggggtaatttggtaatctattaattggttgag 44389005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 42245803 - 42245732
Alignment:
Q  147 aaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||||  ||||||| |||||||||||| ||||||||| |||||| |||  |||| ||||||||||    
T  42245803 aaaagaaatgtcacttgaattcaccattttgcccctataaggggtaatttgataatctacttattggttgag 42245732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 1942811 - 1942873
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||  ||||||||||||||||||  ||||||||||||||||||||  |||| |||||||    
T  1942811 aatgtcccatgaatttaccattttgcctctataaggggcaatttggtaatctacttattggtt 1942873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 8162840 - 8162792
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaa 201  Q
    |||||||  ||||||||||||||||||| |||||||| |||||||||||    
T  8162840 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaa 8162792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 32844182 - 32844233
Alignment:
Q  164 aatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||||||||||||  |||||||||||||||||||  |||| |||||||    
T  32844182 aatttaccattttgccccgataaggggcaatttggtaatctacttattggtt 32844233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 19243230 - 19243315
Alignment:
Q  126 atctatatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaatt 211  Q
    |||||| |||||||| |||  |||||  |||||  |||| |||||| |||||||| | | |||||||||||||||| |||||||||    
T  19243230 atctatctatatactaatataaaaagtgatgtctgttgattttacctttttgcccctcttaggggcaatttggtaatttactaatt 19243315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 19316414 - 19316499
Alignment:
Q  126 atctatatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaatt 211  Q
    |||||| |||||||| |||  |||||  |||||  |||| |||||| |||||||| | | |||||||||||||||| |||||||||    
T  19316414 atctatctatatactaatataaaaagtgatgtctgttgattttacctttttgcccctcttaggggcaatttggtaatttactaatt 19316499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 22519192 - 22519276
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||| || |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  22519192 tatatacttctattaaaagaa-tgtccattgaatttaccattttgcccctataaggggcaatttagtaaattattaattggttgag 22519276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 19895711 - 19895645
Alignment:
Q  152 aaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  19895711 aaatgtccattgaatttaccattttgcccttataaagggcaatttggtaaattagtaattggttgag 19895645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 11955613 - 11955528
Alignment:
Q  130 atatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    ||||||||||||||| ||||||||||||||  || |||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  11955613 atatatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 11955528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 29530646 - 29530561
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||  |||| ||||||||||    
T  29530646 tatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaatctacttattggttgag 29530561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 19369014 - 19368941
Alignment:
Q  145 ataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||  |||| ||||||||||    
T  19369014 ataaaagaaatgtcccttgattttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 19368941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 26102239 - 26102150
Alignment:
Q  129 tatatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| |||| ||||||||||||| |||||||||||||||||||| |||||| || ||||||||||  | || ||||||||||    
T  26102239 tatatatatactaataagaaaagaaatgtcctttgaatttaccattttgcccctataagaggtaatttggtaatctgcttattggttgag 26102150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 28981904 - 28981817
Alignment:
Q  131 tatatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||| |||| ||||   |||||| |||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||    
T  28981904 tatatatactaataagaaaatccatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatcaactaattggttgag 28981817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 26777912 - 26777850
Alignment:
Q  156 gtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  26777912 gtccattgattttaccattttgcccctatgaggggcaatttggtaaattacaaattggttgag 26777850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 8393585 - 8393638
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattac 206  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  8393585 aatgtcctttgaatttaccattttgcccctataaggggcaatttggtaaattac 8393638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 8528188 - 8528103
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||| |||| ||||||||||||| |||||||||||||| || || ||||||||||||||||||||  || | ||||||||||    
T  8528188 tatatactaataagaaaagaaatgtcccttgaatttaccattctgtccctataaggggcaatttggtaatatatttattggttgag 8528103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 18682511 - 18682564
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattac 206  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  18682511 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattac 18682564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 35855209 - 35855274
Alignment:
Q  136 atacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaa 201  Q
    ||||| |||| ||||||||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  35855209 atactaataagaaaagaaatgtcccttaaatttaccattttgcccctataaggggcaatttggtaa 35855274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 53800521 - 53800586
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| ||||||||||||||| ||  ||||||||||||||||||||| |||||||||||    
T  53800521 aatgtccattgattttaccattttgcccttaggaggggcaatttggtaaattacaaattggttgag 53800586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 22473646 - 22473714
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaa 201  Q
    |||||||||||| |||||||||||| |  || |||||||||||||||| ||||||||||||||||||||    
T  22473646 tatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaa 22473714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 55297414 - 55297343
Alignment:
Q  147 aaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    ||||||||||||| | |||||||||||||| ||| ||||| ||| |||||||||||||| ||||||||||||    
T  55297414 aaaagaaatgtccctcgaatttaccattttacccctataaagggtaatttggtaaattattaattggttgag 55297343  T

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Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 4139412 - 4139350
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||||||| |||||||||||| || ||| ||||||||||||||||||||| ||||||||    
T  4139412 aatgtccattgattttaccattttgtccctattaggggcaatttggtaaattacaaattggtt 4139350  T

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Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 9563227 - 9563308
Alignment:
Q  132 atatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattgg 213  Q
    ||||||||| |||  |||||| ||||| ||| |||||||||||||||||||| || ||||| |||||||||||| |||||||    
T  9563227 atatatactaatataaaaagagatgtctattaaatttaccattttgcccatagaaagggcattttggtaaattattaattgg 9563308  T

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Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 33872207 - 33872287
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattgg 213  Q
    |||||||| |||  |||||||||||||  |||||||||||||||| || || ||||| || |||||||||||| |||||||    
T  33872207 tatatactaatataaaaagaaatgtccgatgaatttaccattttgtccctagaagggccattttggtaaattaataattgg 33872287  T

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Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 40831990 - 40831926
Alignment:
Q  154 atgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||| |||||||||||||||||| | |||||||| ||||| |||||  |||||||||||||||    
T  40831990 atgtcccttgaatttaccattttgctcctataagggacaattcggtaatctactaattggttgag 40831926  T

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Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 11602228 - 11602164
Alignment:
Q  154 atgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||| |||| ||||||||||||||| ||||||||||||||  ||||  || ||||||||||||    
T  11602228 atgtccgttgattttaccattttgcccctataaggggcaattcagtaatctattaattggttgag 11602164  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 2847390 - 2847341
Alignment:
Q  162 tgaatttaccattttgcccatataaggggcaatttggtaaattactaatt 211  Q
    ||||||| ||||||||||| ||  |||||||||||||||| |||||||||    
T  2847390 tgaattttccattttgcccctaagaggggcaatttggtaatttactaatt 2847341  T

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Target: scaffold0385 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 8383 - 8303
Alignment:
Q  135 tatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggtt 215  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  8383 tatacttatattaaaagaaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8303  T

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Target: scaffold0051 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 62084 - 62149
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattactaattggttgag 218  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  62084 aatgtccattgattttaccattttgcccctatgaggggcaatttggtaaattacaaattggttgag 62149  T

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Target: scaffold0069 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 11775 - 11846
Alignment:
Q  133 tatatacttataataaaagaaatgtccattgaatttaccattttgcccatataaggggcaatttggtaaatt 204  Q
    |||||||||||| |||||||||||||  |||||||||||||||||||  ||| |||||||||||||||||||    
T  11775 tatatacttatattaaaagaaatgtcatttgaatttaccattttgcctttattaggggcaatttggtaaatt 11846  T

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Target: scaffold0759 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 5956 - 5903
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaaattac 206  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  5956 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaaattac 5903  T

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Target: scaffold0381 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 9591 - 9639
Alignment:
Q  153 aatgtccattgaatttaccattttgcccatataaggggcaatttggtaa 201  Q
    |||||||  ||||||||||||||||||| |||||||| |||||||||||    
T  9591 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaa 9639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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