View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9802_low_22 (Length: 258)
Name: NF9802_low_22
Description: NF9802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9802_low_22 |
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Alignment Details
Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 255
Target Start/End: Original strand, 3709893 - 3710130
Alignment:
| Q |
18 |
attttaaaacgaattaaggagctcattgctttcctatttacacaacaatactactagtcctaacaaaacttgcaggttaatgtgcaaatcaactgtgtct |
117 |
Q |
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| T |
3709893 |
attttaaaacgaattaaggagctcattgctttcctatttacacaacaatactactagtcctaactaaacttgcaggtcaatgtgcaaatcaactgtgtct |
3709992 |
T |
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| Q |
118 |
ataagttaactccttcatcaaaataacttttggacaagctaaaaaagtgtgcagtcaacttaaagccttaaaaaggccaatctacgataatttcatttaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
3709993 |
ataagttaactccttcatcaaaataacttttggacaagctaaaaaagtgtgcagtcaacttaaagccttaaaaaggacaatctacgataatttcatttaa |
3710092 |
T |
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| Q |
218 |
caaaatcctacaaatcattcttccataacaccaaactc |
255 |
Q |
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||||| ||||||||||||||||||||| |||||||||| |
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| T |
3710093 |
caaaagcctacaaatcattcttccatagcaccaaactc |
3710130 |
T |
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