View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9805_low_5 (Length: 372)

Name: NF9805_low_5
Description: NF9805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9805_low_5
NF9805_low_5
[»] chr4 (3 HSPs)
chr4 (7-284)||(53328627-53328904)
chr4 (7-272)||(22898466-22898731)
chr4 (7-272)||(22950134-22950399)
[»] chr7 (2 HSPs)
chr7 (7-286)||(39954835-39955114)
chr7 (7-283)||(10575300-10575576)
[»] chr5 (1 HSPs)
chr5 (7-284)||(26358540-26358817)
[»] chr2 (2 HSPs)
chr2 (7-269)||(41027485-41027747)
chr2 (177-275)||(30012096-30012194)
[»] chr3 (7 HSPs)
chr3 (7-283)||(21584590-21584866)
chr3 (7-260)||(31825573-31825826)
chr3 (40-260)||(24919902-24920122)
chr3 (40-283)||(24981992-24982235)
chr3 (34-200)||(24923536-24923702)
chr3 (34-260)||(25084978-25085204)
chr3 (34-200)||(24497335-24497501)
[»] chr8 (1 HSPs)
chr8 (7-283)||(14261025-14261301)


Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-131; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 7 - 284
Target Start/End: Original strand, 53328627 - 53328904
Alignment:
Q  7 ggaaagggaggagcaaaacgacaccgtaaggtgcttcgtgataacatccaaggaatcacaaagcctgcaattcgtcgtctcgcaagacgtggtggtgtga 106  Q
    |||||||| ||||| ||||||||||||||||| || || ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  53328627 ggaaagggtggagcgaaacgacaccgtaaggttctgcgcgataacatccagggaatcacaaagcctgcgattcgtcgtctcgcaagacgtggtggtgtga 53328726  T
Q  107 agcgtatcagtggcttaatctatgaagaaactcgtggcgttctcaagatctttcttgagaatgtgattcgtgatgcagtcacctacacagagcatgctcg 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  53328727 agcgtatcagtggcttaatctatgaagaaactcgtggcgttctcaagatctttcttgagaatgtgattcgtgatgctgtcacatacacagagcatgctcg 53328826  T
Q  207 ccgtaagactgttactgcaatggatgttgtttacgctctcaagaggcagggaaggactctttacggtttcggcggtta 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  53328827 ccgtaagactgttactgcaatggatgttgtttacgctctcaagaggcagggaaggactctttacggtttcgggggtta 53328904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 7 - 272
Target Start/End: Original strand, 22898466 - 22898731
Alignment:
Q  7 ggaaagggaggagcaaaacgacaccgtaaggtgcttcgtgataacatccaaggaatcacaaagcctgcaattcgtcgtctcgcaagacgtggtggtgtga 106  Q
    |||||||| |||||||| ||||| ||||||||||||||||| |||||||| ||||| |||||||| || ||||||||||| ||  |  | || || ||||    
T  22898466 ggaaagggtggagcaaagcgacatcgtaaggtgcttcgtgacaacatccagggaataacaaagccagcgattcgtcgtcttgctcgtagaggaggagtga 22898565  T
Q  107 agcgtatcagtggcttaatctatgaagaaactcgtggcgttctcaagatctttcttgagaatgtgattcgtgatgcagtcacctacacagagcatgctcg 206  Q
    ||||||||||||| || || ||||| || || ||||||||  | ||||| ||| | |||||||||||| | ||||| || || ||||| ||||| ||| |    
T  22898566 agcgtatcagtggtttgatttatgaggagacacgtggcgtgttgaagatatttttggagaatgtgattagagatgctgtgacttacactgagcacgctag 22898665  T
Q  207 ccgtaagactgttactgcaatggatgttgtttacgctctcaagaggcagggaaggactctttacgg 272  Q
      | ||||| |||||||| |||||||| ||||| || |||||||| |||||||| || ||||||||    
T  22898666 aaggaagacggttactgctatggatgtggtttatgccctcaagagacagggaagaaccctttacgg 22898731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 7 - 272
Target Start/End: Original strand, 22950134 - 22950399
Alignment:
Q  7 ggaaagggaggagcaaaacgacaccgtaaggtgcttcgtgataacatccaaggaatcacaaagcctgcaattcgtcgtctcgcaagacgtggtggtgtga 106  Q
    |||||||| |||||||| ||||| ||||||||||||||||| |||||||| ||||| |||||||| || ||||||||||| ||  |  | || || ||||    
T  22950134 ggaaagggtggagcaaagcgacatcgtaaggtgcttcgtgacaacatccagggaataacaaagccagcgattcgtcgtcttgctcgtagaggaggagtga 22950233  T
Q  107 agcgtatcagtggcttaatctatgaagaaactcgtggcgttctcaagatctttcttgagaatgtgattcgtgatgcagtcacctacacagagcatgctcg 206  Q
    ||||||||||||| || || ||||| || || ||||||||  | ||||| ||| | |||||||||||| | ||||| || || ||||| ||||| ||| |    
T  22950234 agcgtatcagtggtttgatttatgaggagacacgtggcgtgttgaagatatttttggagaatgtgattagagatgctgtgacttacactgagcacgctag 22950333  T
Q  207 ccgtaagactgttactgcaatggatgttgtttacgctctcaagaggcagggaaggactctttacgg 272  Q
      | ||||| |||||||| |||||||| ||||| || |||||||| |||||||| || ||||||||    
T  22950334 aaggaagacggttactgctatggatgtggtttatgccctcaagagacagggaagaaccctttacgg 22950399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 7 - 286
Target Start/End: Complemental strand, 39955114 - 39954835
Alignment:
Q  7 ggaaagggaggagcaaaacgacaccgtaaggtgcttcgtgataacatccaaggaatcacaaagcctgcaattcgtcgtctcgcaagacgtggtggtgtga 106  Q
    |||||||||||||||||  | ||| | ||||| ||||| || ||||||||||| || || |||||||| ||||||||||| ||||| |||||||||||||    
T  39955114 ggaaagggaggagcaaagaggcacagaaaggttcttcgcgacaacatccaaggcataaccaagcctgcgattcgtcgtcttgcaaggcgtggtggtgtga 39955015  T
Q  107 agcgtatcagtggcttaatctatgaagaaactcgtggcgttctcaagatctttcttgagaatgtgattcgtgatgcagtcacctacacagagcatgctcg 206  Q
    || | ||||| ||  | ||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||| |    
T  39955014 agagaatcagcggtctcatctacgaagagactcgcggtgttctcaagatctttcttgagaatgtgattcgtgatgctgttacttacactgagcatgctag 39954915  T
Q  207 ccgtaagactgttactgcaatggatgttgtttacgctctcaagaggcagggaaggactctttacggtttcggcggttaaa 286  Q
      | || |||||||| || ||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||||    
T  39954914 gaggaaaactgttaccgccatggatgttgtgtatgctctcaagaggcagggaaggactctctacggtttcggtggttaaa 39954835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 283
Target Start/End: Original strand, 10575300 - 10575576
Alignment:
Q  7 ggaaagggaggagcaaaacgacaccgtaaggtgcttcgtgataacatccaaggaatcacaaagcctgcaattcgtcgtctcgcaagacgtggtggtgtga 106  Q
    |||||||| || |||||  |||| || ||||| || ||||| ||||||||||||||||||||||| || ||||||||  | || ||| | || |||||||    
T  10575300 ggaaaggggggtgcaaagagacatcgcaaggttctccgtgacaacatccaaggaatcacaaagccagcgattcgtcgattggcgagaagaggaggtgtga 10575399  T
Q  107 agcgtatcagtggcttaatctatgaagaaactcgtggcgttctcaagatctttcttgagaatgtgattcgtgatgcagtcacctacacagagcatgctcg 206  Q
    |  | |||||||| || |||||||| |||||  | || ||  | ||||||||  | |||||||| ||  | ||||| || || ||||| ||||||||  |    
T  10575400 aaagaatcagtggattgatctatgaggaaacaagaggtgtgttgaagatcttcttggagaatgttataagagatgctgttacttacactgagcatgcgag 10575499  T
Q  207 ccgtaagactgttactgcaatggatgttgtttacgctctcaagaggcagggaaggactctttacggtttcggcggtt 283  Q
      | || ||||| ||||| ||||||||||||||||| || ||||| || ||||| || || || |||||||| ||||    
T  10575500 gaggaaaactgtgactgctatggatgttgtttacgcgcttaagagacaaggaagaaccctctatggtttcggtggtt 10575576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 7 - 284
Target Start/End: Complemental strand, 26358817 - 26358540
Alignment:
Q  7 ggaaagggaggagcaaaacgacaccgtaaggtgcttcgtgataacatccaaggaatcacaaagcctgcaattcgtcgtctcgcaagacgtggtggtgtga 106  Q
    |||||||| || ||||| || || || || || ||||| |||||||| || ||||| || || || || ||||||||||| ||||| ||||||||||| |    
T  26358817 ggaaagggtggtgcaaagcgtcatcgcaaagttcttcgagataacattcagggaattaccaaacccgcgattcgtcgtcttgcaaggcgtggtggtgtaa 26358718  T
Q  107 agcgtatcagtggcttaatctatgaagaaactcgtggcgttctcaagatctttcttgagaatgtgattcgtgatgcagtcacctacacagagcatgctcg 206  Q
    | |||||||||||  | |||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||| ||||| || ||||||||    
T  26358717 aacgtatcagtggtctgatctatgaagaaactcgtggtgttctcaagatatttcttgagaatgttattcgtgatgctgtcacttacactgaacatgctcg 26358618  T
Q  207 ccgtaagactgttactgcaatggatgttgtttacgctctcaagaggcagggaaggactctttacggtttcggcggtta 284  Q
     || || || |||||||| |||||||||||||| || ||||||||||| |||||||| ||||| ||||| || |||||    
T  26358617 tcgcaaaacagttactgctatggatgttgtttatgcgctcaagaggcaaggaaggaccctttatggttttgggggtta 26358540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 4e-51; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 7 - 269
Target Start/End: Original strand, 41027485 - 41027747
Alignment:
Q  7 ggaaagggaggagcaaaacgacaccgtaaggtgcttcgtgataacatccaaggaatcacaaagcctgcaattcgtcgtctcgcaagacgtggtggtgtga 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||| ||||||||| | ||| |  | || || ||||    
T  41027485 ggaaagggaggagcaaaacgacaccgtaaggtgcttcgtgataacattcaaggaattacgaagcctgcgattcgtcgtttggcacgtagaggaggagtga 41027584  T
Q  107 agcgtatcagtggcttaatctatgaagaaactcgtggcgttctcaagatctttcttgagaatgtgattcgtgatgcagtcacctacacagagcatgctcg 206  Q
    ||||||| || || || ||||| ||||| || ||||||||  | ||||||||| | |||||||| ||||||||||| || || ||||||||||| ||| |    
T  41027585 agcgtataagcggtttgatctacgaagagacacgtggcgtgttgaagatctttttggagaatgttattcgtgatgctgttacttacacagagcacgctag 41027684  T
Q  207 ccgtaagactgttactgcaatggatgttgtttacgctctcaagaggcagggaaggactcttta 269  Q
      | |||||||||||||| |||||||||||||| ||  | ||||| || ||||||||||||||    
T  41027685 gagaaagactgttactgctatggatgttgtttatgcattgaagagacaaggaaggactcttta 41027747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 30012096 - 30012194
Alignment:
Q  177 tgatgcagtcacctacacagagcatgctcgccgtaagactgttactgcaatggatgttgtttacgctctcaagaggcagggaaggactctttacggttt 275  Q
    |||||| || || ||||| || || ||||| || ||||| || ||||| |||||||| ||||| || ||||||||||| |||||||| ||||| |||||    
T  30012096 tgatgctgttacttacactgaacacgctcgtcgcaagacagtgactgctatggatgtggtttatgcgctcaagaggcaaggaaggaccctttatggttt 30012194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 283
Target Start/End: Complemental strand, 21584866 - 21584590
Alignment:
Q  7 ggaaagggaggagcaaaacgacaccgtaaggtgcttcgtgataacatccaaggaatcacaaagcctgcaattcgtcgtctcgcaagacgtggtggtgtga 106  Q
    ||||||||||| |||||  ||||| | || || |||||||||||||| || |||||||| ||||| || ||||||||  | || ||| | |||||||| |    
T  21584866 ggaaagggaggtgcaaagagacacaggaaagttcttcgtgataacattcagggaatcaccaagccagcgattcgtcgattggcgagaagaggtggtgtta 21584767  T
Q  107 agcgtatcagtggcttaatctatgaagaaactcgtggcgttctcaagatctttcttg-agaatgtgattcgtgatgcagtcacctacacagagcatgctc 205  Q
    || | |||||||| || || ||||| |||||  | || ||||| ||||| ||||||| ||||||||||||||||||| || || ||||| ||||||||      
T  21584766 agagaatcagtggtttgatttatgaggaaacaagaggagttcttaagat-tttcttggagaatgtgattcgtgatgcggttacgtacactgagcatgcaa 21584668  T
Q  206 gccgtaagactgttactgcaatggatgttgtttacgctctcaagaggcagggaaggactctttacggtttcggcggtt 283  Q
    |  | |||||||| ||||| |||||||||||||| ||| | |||||||| ||||| || ||||| || ||||| ||||    
T  21584667 ggaggaagactgtgactgctatggatgttgtttatgctttgaagaggcaaggaagaacgctttatggattcggaggtt 21584590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 260
Target Start/End: Complemental strand, 31825826 - 31825573
Alignment:
Q  7 ggaaagggaggagcaaaacgacaccgtaaggtgcttcgtgataacatccaaggaatcacaaagcctgcaattcgtcgtctcgcaagacgtggtggtgtga 106  Q
    ||||||||||| |||||| | ||| | || || || || || |||||||| || ||||| |||||||| ||||||||  | || ||| | ||||||||||    
T  31825826 ggaaagggaggtgcaaaaaggcacagaaaagttctccgcgacaacatccagggtatcactaagcctgccattcgtcgattggcgagaagaggtggtgtga 31825727  T
Q  107 agcgtatcagtggcttaatctatgaagaaactcgtggcgttctcaagatctttcttgagaatgtgattcgtgatgcagtcacctacacagagcatgctcg 206  Q
    || | |||||||| || ||||||||||||||| | || ||  | ||||||||  | |||||||| || |||||||| ||||| ||||| ||||| ||| |    
T  31825726 agaggatcagtggtttgatctatgaagaaactagaggtgtcttgaagatcttcttggagaatgtcatccgtgatgcggtcacatacactgagcacgctag 31825627  T
Q  207 ccgtaagactgttactgcaatggatgttgtttacgctctcaagaggcagggaag 260  Q
      | ||||| ||||| || ||||||||||| || ||| | ||||||||||||||    
T  31825626 gaggaagacagttaccgcgatggatgttgtctatgctttgaagaggcagggaag 31825573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 260
Target Start/End: Complemental strand, 24920122 - 24919902
Alignment:
Q  40 cttcgtgataacatccaaggaatcacaaagcctgcaattcgtcgtctcgcaagacgtggtggtgtgaagcgtatcagtggcttaatctatgaagaaactc 139  Q
    ||||||||||||||||| || ||||| |||||||||||||||||  | |||||| | |||||||||||| | ||||| || || ||||||||||||||      
T  24920122 cttcgtgataacatccagggtatcaccaagcctgcaattcgtcgattggcaagaagaggtggtgtgaagagaatcagcggtttgatctatgaagaaacca 24920023  T
Q  140 gtggcgttctcaagatctttcttgagaatgtgattcgtgatgcagtcacctacacagagcatgctcgccgtaagactgttactgcaatggatgttgttta 239  Q
    | || ||  | ||||||||  | |||||||| ||||||||||| || || ||||| ||||| ||| |  | ||||| || || || |||||||| || ||    
T  24920022 gaggtgtcttgaagatcttcttagagaatgtcattcgtgatgctgtgacatacactgagcacgctaggaggaagacagtgacagccatggatgtcgtcta 24919923  T
Q  240 cgctctcaagaggcagggaag 260  Q
     ||| | ||||||||||||||    
T  24919922 tgctttgaagaggcagggaag 24919902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 283
Target Start/End: Original strand, 24981992 - 24982235
Alignment:
Q  40 cttcgtgataacatccaaggaatcacaaagcctgcaattcgtcgtctcgcaagacgtggtggtgtgaagcgtatcagtggcttaatctatgaagaaactc 139  Q
    ||||||||||||||||| || ||||| |||||||| ||||||||  | |||||| | |||||||| ||| | |||||||| || || |||||||||||      
T  24981992 cttcgtgataacatccagggtatcaccaagcctgctattcgtcgattggcaagaagaggtggtgttaagagaatcagtggtttgatatatgaagaaacca 24982091  T
Q  140 gtggcgttctcaagatctttcttgagaatgtgattcgtgatgcagtcacctacacagagcatgctcgccgtaagactgttactgcaatggatgttgttta 239  Q
    | || ||  | ||||||||  | |||||||| || ||||||||||| || ||||| ||||| ||| |  | ||||||||||| || ||||||||||| ||    
T  24982092 gaggtgtcttgaagatcttcttggagaatgtcatccgtgatgcagttacatacactgagcacgctaggaggaagactgttaccgccatggatgttgtcta 24982191  T
Q  240 cgctctcaagaggcagggaaggactctttacggtttcggcggtt 283  Q
     ||| | ||||| || ||||| || || || |||||||| ||||    
T  24982192 tgctttgaagagacaaggaagaaccctctatggtttcggtggtt 24982235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 34 - 200
Target Start/End: Complemental strand, 24923702 - 24923536
Alignment:
Q  34 aaggtgcttcgtgataacatccaaggaatcacaaagcctgcaattcgtcgtctcgcaagacgtggtggtgtgaagcgtatcagtggcttaatctatgaag 133  Q
    ||||| ||||||||||||||||| || ||||| |||||||| ||||||||  | |||||| | |||||||| ||| | |||||||| || ||||||||||    
T  24923702 aaggttcttcgtgataacatccagggtatcaccaagcctgctattcgtcgattggcaagaagaggtggtgttaagagaatcagtggtttgatctatgaag 24923603  T
Q  134 aaactcgtggcgttctcaagatctttcttgagaatgtgattcgtgatgcagtcacctacacagagca 200  Q
    ||||  | || ||  | ||||||||  | |||||||| ||||||||||| || || ||||| |||||    
T  24923602 aaaccagaggtgtcttgaagatcttcttggagaatgtcattcgtgatgctgtgacatacactgagca 24923536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 34 - 260
Target Start/End: Original strand, 25084978 - 25085204
Alignment:
Q  34 aaggtgcttcgtgataacatccaaggaatcacaaagcctgcaattcgtcgtctcgcaagacgtggtggtgtgaagcgtatcagtggcttaatctatgaag 133  Q
    ||||| ||||||||||||||||| || ||||| |||||||| |||||| |  | || ||| | |||||||||||| | |||||||| || || |||||||    
T  25084978 aaggttcttcgtgataacatccagggtatcaccaagcctgccattcgtagattggcgagaagaggtggtgtgaagagaatcagtggtttgatatatgaag 25085077  T
Q  134 aaactcgtggcgttctcaagatctttcttgagaatgtgattcgtgatgcagtcacctacacagagcatgctcgccgtaagactgttactgcaatggatgt 233  Q
    ||||  | || ||  | ||||||||  | ||||||||||| ||||||||||| || ||||| ||||| ||  |  | |||||||| || || ||||||||    
T  25085078 aaaccagaggtgtcttgaagatcttcttggagaatgtgatccgtgatgcagttacatacactgagcacgcaaggaggaagactgtgacagccatggatgt 25085177  T
Q  234 tgtttacgctctcaagaggcagggaag 260  Q
    ||| || ||| | ||||| ||||||||    
T  25085178 tgtctatgctttgaagagacagggaag 25085204  T

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Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 200
Target Start/End: Complemental strand, 24497501 - 24497335
Alignment:
Q  34 aaggtgcttcgtgataacatccaaggaatcacaaagcctgcaattcgtcgtctcgcaagacgtggtggtgtgaagcgtatcagtggcttaatctatgaag 133  Q
    ||||| |||||||| |||||||| || ||||| |||||||| ||||||||  | |||||| | |||||||| ||| | |||||||| || ||||||||||    
T  24497501 aaggttcttcgtgacaacatccagggtatcaccaagcctgctattcgtcgattggcaagaagaggtggtgttaagagaatcagtggattgatctatgaag 24497402  T
Q  134 aaactcgtggcgttctcaagatctttcttgagaatgtgattcgtgatgcagtcacctacacagagca 200  Q
    ||||  | || ||  | ||||||||  | || |||||||| ||||||||||| || ||||| |||||    
T  24497401 aaaccagaggtgtcttgaagatcttcttggaaaatgtgatccgtgatgcagttacatacactgagca 24497335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 283
Target Start/End: Complemental strand, 14261301 - 14261025
Alignment:
Q  7 ggaaagggaggagcaaaacgacaccgtaaggtgcttcgtgataacatccaaggaatcacaaagcctgcaattcgtcgtctcgcaagacgtggtggtgtga 106  Q
    ||||||||||| |||||  |||| || || ||||||||||| ||||||||||||||||||||||| || ||||| ||  | || ||| | || |||||||    
T  14261301 ggaaagggaggtgcaaagagacatcgcaaagtgcttcgtgacaacatccaaggaatcacaaagccagcgattcggcgattagcgagaagaggaggtgtga 14261202  T
Q  107 agcgtatcagtggcttaatctatgaagaaactcgtggcgttctcaagatctttctt-gagaatgtgattcgtgatgcagtcacctacacagagcatgctc 205  Q
    || | ||||| || || || |||||||||||||| || ||  | ||||| |||||| |||||||||||  | ||||| || || || || || |||||      
T  14261201 agagaatcagcgggttgatttatgaagaaactcgcggtgtgttgaagat-tttcttggagaatgtgataagagatgctgttacgtatactgaacatgcga 14261103  T
Q  206 gccgtaagactgttactgcaatggatgttgtttacgctctcaagaggcagggaaggactctttacggtttcggcggtt 283  Q
    |  | ||||| |||||||| |||||||||||||| ||  | ||||| || ||||||||| | || |||||||| ||||    
T  14261102 ggaggaagacggttactgctatggatgttgtttatgcgttgaagagacaaggaaggactttgtatggtttcggaggtt 14261025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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