View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9807_low_1 (Length: 985)

Name: NF9807_low_1
Description: NF9807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9807_low_1
NF9807_low_1
[»] chr2 (27 HSPs)
chr2 (40-815)||(15513656-15514431)
chr2 (30-529)||(30266982-30267475)
chr2 (41-305)||(31342561-31342826)
chr2 (32-298)||(44920939-44921205)
chr2 (46-278)||(7718180-7718412)
chr2 (633-815)||(30267530-30267711)
chr2 (44-300)||(7702422-7702680)
chr2 (340-476)||(31342405-31342545)
chr2 (51-297)||(24479152-24479400)
chr2 (30-147)||(41573372-41573489)
chr2 (633-746)||(44921673-44921785)
chr2 (325-530)||(44921419-44921619)
chr2 (48-298)||(22966520-22966773)
chr2 (51-147)||(11017457-11017553)
chr2 (64-305)||(27151082-27151319)
chr2 (51-282)||(40016591-40016819)
chr2 (605-697)||(15539030-15539122)
chr2 (452-532)||(15539261-15539341)
chr2 (48-147)||(45404711-45404810)
chr2 (456-511)||(41573780-41573835)
chr2 (30-104)||(30553814-30553888)
chr2 (454-498)||(31342364-31342408)
chr2 (221-298)||(26734904-26734984)
chr2 (340-376)||(22967005-22967041)
chr2 (761-815)||(44923931-44923985)
chr2 (49-133)||(15540317-15540401)
chr2 (54-133)||(26734754-26734830)
[»] chr7 (29 HSPs)
chr7 (30-719)||(9241897-9242605)
chr7 (396-807)||(19746925-19747339)
chr7 (30-476)||(4685076-4685524)
chr7 (514-815)||(10022512-10022817)
chr7 (29-428)||(10022102-10022491)
chr7 (51-378)||(20277131-20277460)
chr7 (30-194)||(26224935-26225099)
chr7 (30-194)||(26205372-26205536)
chr7 (44-275)||(26608413-26608646)
chr7 (44-298)||(26618957-26619209)
chr7 (45-298)||(26620946-26621197)
chr7 (30-159)||(16170250-16170379)
chr7 (44-196)||(30089728-30089880)
chr7 (220-364)||(19746791-19746933)
chr7 (178-297)||(3374524-3374646)
chr7 (48-282)||(8241595-8241828)
chr7 (48-147)||(3234324-3234424)
chr7 (452-515)||(20276995-20277060)
chr7 (50-164)||(3364981-3365096)
chr7 (464-512)||(19111398-19111446)
chr7 (65-144)||(16086501-16086580)
chr7 (320-374)||(3374646-3374700)
chr7 (42-147)||(7711361-7711466)
chr7 (931-969)||(19747467-19747505)
chr7 (43-147)||(28312668-28312772)
chr7 (492-532)||(29931987-29932027)
chr7 (452-511)||(2931696-2931755)
chr7 (118-147)||(26701098-26701127)
chr7 (80-153)||(27135958-27136031)
[»] chr6 (39 HSPs)
chr6 (30-759)||(6684073-6684835)
chr6 (29-719)||(14668757-14669468)
chr6 (29-719)||(17719136-17719845)
chr6 (28-476)||(15361692-15362142)
chr6 (29-476)||(16734783-16735232)
chr6 (38-472)||(12591820-12592255)
chr6 (30-297)||(11936620-11936888)
chr6 (63-297)||(11948600-11948835)
chr6 (29-276)||(10070635-10070879)
chr6 (557-759)||(12592308-12592513)
chr6 (34-142)||(15690421-15690529)
chr6 (60-148)||(23264499-23264587)
chr6 (48-282)||(1942566-1942793)
chr6 (53-164)||(29667902-29668015)
chr6 (48-164)||(9631142-9631258)
chr6 (51-258)||(23904243-23904452)
chr6 (655-733)||(30821714-30821792)
chr6 (51-157)||(4485559-4485665)
chr6 (452-511)||(4485302-4485361)
chr6 (455-510)||(12592257-12592312)
chr6 (49-147)||(27969921-27970019)
chr6 (48-147)||(2668457-2668556)
chr6 (48-147)||(14003870-14003969)
chr6 (34-195)||(34374808-34374971)
chr6 (48-154)||(2941002-2941109)
chr6 (48-111)||(6673659-6673721)
chr6 (46-147)||(4591145-4591246)
chr6 (64-148)||(30481231-30481315)
chr6 (453-528)||(8495505-8495580)
chr6 (43-147)||(6346862-6346966)
chr6 (459-532)||(28736220-28736293)
chr6 (48-147)||(7601338-7601437)
chr6 (325-369)||(10264033-10264077)
chr6 (72-132)||(10935800-10935860)
chr6 (452-511)||(6673271-6673329)
chr6 (463-498)||(15362148-15362183)
chr6 (463-498)||(16735238-16735273)
chr6 (43-147)||(9236021-9236126)
chr6 (29-58)||(14666535-14666564)
[»] chr8 (32 HSPs)
chr8 (30-719)||(19448427-19449134)
chr8 (30-719)||(19531942-19532649)
chr8 (30-479)||(28248750-28249196)
chr8 (30-472)||(19369589-19370031)
chr8 (29-476)||(25638785-25639234)
chr8 (30-473)||(45355788-45356233)
chr8 (29-610)||(5528721-5529310)
chr8 (29-408)||(25637622-25637999)
chr8 (29-295)||(17634326-17634593)
chr8 (30-407)||(18766896-18767273)
chr8 (455-719)||(18767319-18767583)
chr8 (463-719)||(27810289-27810548)
chr8 (52-377)||(29345432-29345756)
chr8 (43-298)||(6801676-6801938)
chr8 (44-300)||(14997614-14997872)
chr8 (89-298)||(6223439-6223651)
chr8 (52-372)||(5650725-5651044)
chr8 (317-408)||(27810162-27810253)
chr8 (187-372)||(12105496-12105680)
chr8 (455-571)||(25638027-25638143)
chr8 (48-292)||(6403590-6403833)
chr8 (48-147)||(29553626-29553725)
chr8 (48-146)||(31347346-31347444)
chr8 (452-517)||(29345828-29345893)
chr8 (51-148)||(5000679-5000776)
chr8 (48-169)||(31369088-31369209)
chr8 (456-498)||(45355744-45355786)
chr8 (43-147)||(19371273-19371377)
chr8 (48-147)||(19341425-19341524)
chr8 (455-502)||(5650590-5650637)
chr8 (44-103)||(7292827-7292885)
chr8 (463-498)||(25639240-25639275)
[»] scaffold0069 (1 HSPs)
scaffold0069 (30-719)||(40111-40819)
[»] chr4 (26 HSPs)
chr4 (30-719)||(1684371-1685073)
chr4 (30-473)||(43600246-43600691)
chr4 (30-529)||(47065662-47066155)
chr4 (30-529)||(53300330-53300825)
chr4 (30-298)||(1152023-1152292)
chr4 (633-815)||(47065426-47065607)
chr4 (119-373)||(27739554-27739807)
chr4 (633-815)||(53300880-53301061)
chr4 (531-719)||(8142828-8143017)
chr4 (52-297)||(37750847-37751088)
chr4 (52-164)||(4881056-4881168)
chr4 (52-164)||(4904127-4904239)
chr4 (48-183)||(24558963-24559098)
chr4 (67-164)||(21539259-21539355)
chr4 (60-129)||(48464049-48464118)
chr4 (48-126)||(26075222-26075300)
chr4 (48-147)||(8573166-8573265)
chr4 (48-147)||(8575285-8575384)
chr4 (452-511)||(39073909-39073968)
chr4 (54-111)||(26075290-26075347)
chr4 (615-697)||(25908615-25908697)
chr4 (48-147)||(28461086-28461185)
chr4 (48-147)||(54186526-54186624)
chr4 (463-498)||(43600700-43600735)
chr4 (43-147)||(2549252-2549356)
chr4 (98-147)||(21317485-21317534)
[»] chr3 (31 HSPs)
chr3 (30-759)||(2942584-2943333)
chr3 (35-473)||(13845976-13846416)
chr3 (30-476)||(1654555-1655003)
chr3 (30-473)||(2550145-2550590)
chr3 (30-476)||(7407427-7407875)
chr3 (39-411)||(1627688-1628059)
chr3 (48-298)||(9633295-9633545)
chr3 (119-298)||(28745043-28745223)
chr3 (52-169)||(26707860-26707977)
chr3 (55-147)||(16457335-16457427)
chr3 (48-147)||(1613217-1613316)
chr3 (48-154)||(5498475-5498581)
chr3 (63-169)||(36035301-36035407)
chr3 (48-248)||(27259356-27259548)
chr3 (317-376)||(2180192-2180251)
chr3 (48-147)||(23358460-23358559)
chr3 (48-147)||(23363281-23363380)
chr3 (48-156)||(27713434-27713539)
chr3 (454-498)||(7395810-7395854)
chr3 (454-498)||(7407386-7407430)
chr3 (48-147)||(9638994-9639093)
chr3 (452-511)||(1612955-1613014)
chr3 (463-505)||(2180333-2180375)
chr3 (65-256)||(35082990-35083187)
chr3 (324-369)||(16457159-16457204)
chr3 (340-376)||(9633219-9633255)
chr3 (48-147)||(28699126-28699225)
chr3 (463-498)||(2550599-2550634)
chr3 (463-498)||(13846425-13846460)
chr3 (98-169)||(26735681-26735752)
chr3 (44-259)||(36035465-36035673)
[»] chr5 (36 HSPs)
chr5 (30-719)||(17037522-17038235)
chr5 (30-476)||(5078737-5079185)
chr5 (29-260)||(7410802-7411033)
chr5 (187-420)||(23616546-23616778)
chr5 (187-420)||(23847943-23848175)
chr5 (252-510)||(7411534-7411796)
chr5 (525-719)||(23615971-23616165)
chr5 (525-719)||(23847367-23847561)
chr5 (28-194)||(23679418-23679584)
chr5 (28-194)||(23855227-23855393)
chr5 (29-143)||(31068971-31069084)
chr5 (51-231)||(19984995-19985176)
chr5 (52-227)||(12042099-12042276)
chr5 (44-300)||(31571022-31571285)
chr5 (48-147)||(9354393-9354492)
chr5 (51-248)||(30786267-30786463)
chr5 (48-147)||(9333565-9333664)
chr5 (455-526)||(23616433-23616504)
chr5 (455-526)||(23847830-23847901)
chr5 (29-86)||(31406416-31406473)
chr5 (48-111)||(18191889-18191952)
chr5 (63-130)||(10869450-10869516)
chr5 (82-147)||(42076078-42076143)
chr5 (80-183)||(37233061-37233164)
chr5 (242-300)||(38449829-38449888)
chr5 (457-510)||(5077430-5077483)
chr5 (66-147)||(40402013-40402094)
chr5 (48-147)||(19615036-19615135)
chr5 (615-697)||(40422331-40422413)
chr5 (43-147)||(15160379-15160483)
chr5 (43-147)||(30655180-30655284)
chr5 (48-99)||(11833293-11833344)
chr5 (52-111)||(14117295-14117354)
chr5 (212-292)||(10869817-10869900)
chr5 (43-92)||(28080092-28080141)
chr5 (29-58)||(31406125-31406154)
[»] scaffold0684 (1 HSPs)
scaffold0684 (30-660)||(217-868)
[»] scaffold0576 (1 HSPs)
scaffold0576 (28-479)||(6676-7129)
[»] chr1 (22 HSPs)
chr1 (36-472)||(51758738-51759158)
chr1 (529-762)||(51759202-51759438)
chr1 (30-281)||(13208590-13208843)
chr1 (36-154)||(16222763-16222881)
chr1 (44-298)||(18308141-18308397)
chr1 (51-248)||(28636903-28637101)
chr1 (51-376)||(897455-897779)
chr1 (44-269)||(39368519-39368747)
chr1 (50-157)||(12189951-12190058)
chr1 (28-120)||(37097371-37097463)
chr1 (51-136)||(5911679-5911764)
chr1 (31-132)||(15204570-15204675)
chr1 (30-133)||(15214306-15214409)
chr1 (30-188)||(1843932-1844089)
chr1 (34-112)||(15193902-15193980)
chr1 (51-145)||(17112925-17113019)
chr1 (71-132)||(3399642-3399703)
chr1 (455-498)||(51759160-51759203)
chr1 (43-147)||(20427737-20427841)
chr1 (464-507)||(897870-897913)
chr1 (245-295)||(28637571-28637622)
chr1 (261-305)||(39367984-39368030)
[»] scaffold1808 (1 HSPs)
scaffold1808 (642-807)||(1008-1172)
[»] scaffold0105 (2 HSPs)
scaffold0105 (633-815)||(11-192)
scaffold0105 (333-529)||(247-438)
[»] scaffold0002 (1 HSPs)
scaffold0002 (51-157)||(446277-446383)


Alignment Details
Target: chr2 (Bit Score: 423; Significance: 0; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 40 - 815
Target Start/End: Original strand, 15513656 - 15514431
Alignment:
Q  40 ataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtg 139  Q
    ||||| ||||||||||||| || |||||||||| ||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||| ||||    
T  15513656 ataattacatttagtaacaattaaaaattgtaagtaaatcaagaaaaatgttactagttaaattttgtaacacttgaacaattgttaggtaaagctcgtg 15513755  T
Q  140 ttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtatcatttgtaac 239  Q
    ||||||||  | ||||||||||||| |||| |||||| ||| ||||||||||||||||||| | |||| |||||  |||||||||||||||| | |||||    
T  15513756 ttactaaaaagatttagttacattttatagtactatctgtatcaatcaaaaagtgtcgcaa-tgttacattattagaacactttttgtatcactagtaac 15513854  T
Q  240 aataaaaaagtgttacatttataatttttgagaagttgtaaaa-gtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaatttgtctttg 338  Q
    ||| |||||||||||| |||||||||||||||||||||||||| |||||||||| | |||  |||||           |||| || ||||||||||||||    
T  15513855 aattaaaaagtgttacgtttataatttttgagaagttgtaaaaagtgtcgcaaact-gtctcaactaaaaaatttt--gaatctatcaaatttgtctttg 15513951  T
Q  339 cttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataatttcccccttcattgttcttat 438  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||    
T  15513952 cttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctagatttccccccttcattgttcttat 15514051  T
Q  439 tcttgcataacataatgaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaatgtaacatgtactctataaaatatccca 538  Q
    ||||||||||   ||  |||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15514052 tcttgcataatgaaaataactatgcaacacaatttgaatgacatactgaaacgattacaagttttcatccaatgtaacatgtactctataaaatatcaca 15514151  T
Q  539 ctgcactattattattcttccaaccatattatcagccttccattttcttttct--ttgattctttt-gctccaagttgttgacactctacaaatttattt 635  Q
     ||  || || ||||||||||||||||||| ||||||||||||||| |||| |  ||||||||||| |||||||||||||||| ||||||||||||||||    
T  15514152 ttggtctgttcttattcttccaaccatattctcagccttccattttgttttttgcttgattctttttgctccaagttgttgacgctctacaaatttattt 15514251  T
Q  636 tccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataaacaatataatgcattcttaagcagtggtca 735  Q
    ||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||  ||||||||||||||||||||| ||| ||||||||||  |||    
T  15514252 tccttatctttcttcttcaaatcttctcgcatccttttatagtattcaactttttgtcttgccaaaataaacaatataatacatacttaagcagtaatca 15514351  T
Q  736 catataaactacaagatagtcacatgtagcagcatggaaacacttgcaatgatatcaacaatcatagagcaatatacaat 815  Q
    ||||||||||| |||||||||| | |||| | ||| |||| ||||||||||||||||||||||| | |||||||||||||    
T  15514352 catataaactataagatagtcataggtagtaacatagaaaaacttgcaatgatatcaacaatcaaaaagcaatatacaat 15514431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 30 - 529
Target Start/End: Original strand, 30266982 - 30267475
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||  |||||||||||||||    
T  30266982 cactactacaataatgacatttagtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagtaacacctgaacaattgttaggt 30267081  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    |||||||||||||| |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  30267082 aaagcccgtgttaccaaagagttttagttacattttatagtactatccgtaacaatcaaaaagtgtcgcaaatgttacactattgtaacactttttgtat 30267181  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
     | | ||||||||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||||||  | ||||            ||| ||| |||    
T  30267182 aactagtaacaataaaaaagtgttacatttataaattttaagaagttgtaaaaagtgtggcaaaattgtttagactataattttttt--aatctacaaaa 30267279  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctat--aatttccccctt 426  Q
     || ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| | |||||||||||||||||||  |||||||||       
T  30267280 attttctttgcttagacttcattcatatttgaattaac--atattagagacaagttttaataaccaatttgaattacatactctataaaatttcccc--- 30267374  T
Q  427 cattgttcttattcttgcataa-cataatgaac-------tatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaatgtaacat 518  Q
       ||       ||||||||||  | |||||||       ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||    
T  30267375 ---tg-------tcttgcataatgaaaatgaactatgcactatgcaacacattttgaattacatactaaaacgattacaagttttcatccaatgtaccat 30267464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 41 - 305
Target Start/End: Complemental strand, 31342826 - 31342561
Alignment:
Q  41 taatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgt 140  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||||||||    
T  31342826 taatggcaattagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttagataaagcccgtgt 31342727  T
Q  141 tactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtatcatttgtaaca 240  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||||||||||| ||||||  ||||||||||||||||||||||||||| ||||||||    
T  31342726 tactaaagtgttttagttacattttatagtactatctgtaacaatcaaaaagtgttgcaaatggtaccttattgtaacactttttgtatcacttgtaaca 31342627  T
Q  241 ataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaacta 305  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||| ||||||    
T  31342626 ataaaaaagtgttacatttataatttttgaggagttgtaaaaaatgtcgcaaaattgtctaaacta 31342561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 32 - 298
Target Start/End: Original strand, 44920939 - 44921205
Alignment:
Q  32 ctactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaa 131  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||   ||||||||||||||||    
T  44920939 ctactacaataatgacatttagtaacacttgaaaattgtaactaaatcaaaaaaat-gttactaattaaatttagtaacacctaaacaattgttaggtaa 44921037  T
Q  132 agcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtatca 231  Q
    ||| ||||||||||||| ||||||||||||||| |||| |||||| |||||||| ||||| |||||||||| ||||  ||||||||||||||||||||||    
T  44921038 agctcgtgttactaaagagttttagttacattttatagtactatccgtaacaataaaaaaatgtcgcaaatgttacactattgtaacactttttgtatca 44921137  T
Q  232 tttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtc 298  Q
     | |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  44921138 ctagtaacaataaaaaagtgttacatttataatttttgagaagttgtaaaaattgtcgcaaaattgtc 44921205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 46 - 278
Target Start/End: Original strand, 7718180 - 7718412
Alignment:
Q  46 acatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttacta 145  Q
    ||||||||||| | ||||||||||||||||||||||||||| | |||||||||||||||||||||||  ||||||||||||| ||||| |||||||||||    
T  7718180 acatttagtaatacttgaaaattgtaactaaatcaagaaaaatattactaattaaatttagtaacacatgaacaattgttagataaagtccgtgttacta 7718279  T
Q  146 aagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtatca-tttgtaacaataa 244  Q
    ||| |||||| |||||||| |||| |||||| |||| ||| ||||| |||||||||| || | ||||||||||||||||||||||| ||  |||||||||    
T  7718280 aagagttttaattacattttatagtactatccgtaataataaaaaaatgtcgcaaatgttgcattattgtaacactttttgtatcacttaataacaataa 7718379  T
Q  245 aaaagtgttacatttataatttttgagaagttgt 278  Q
    |||| |||||||||||||||||||||||||||||    
T  7718380 aaaa-tgttacatttataatttttgagaagttgt 7718412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 633 - 815
Target Start/End: Original strand, 30267530 - 30267711
Alignment:
Q  633 ttttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataaacaatataatgcattcttaagcagtgg 732  Q
    |||||||| |||||||||||||||||||||| |||||||| || ||| |||||||||||||||||||||| |||||||||||||||| |||| |  ||||    
T  30267530 ttttcctt-tctttcttcttcaaatcttctcacatccttttatagtattcaactttttgttctgccaaaacaaacaatataatgcatgcttatgtggtgg 30267628  T
Q  733 tcacatataaactacaagatagtcacatgtagcagcatggaaacacttgcaatgatatcaacaatcatagagcaatatacaat 815  Q
    |||||||||||||| || ||||||||| |||||| ||| |||| ||||||||||||||||||||||| | ||||| |||||||    
T  30267629 tcacatataaactataacatagtcacaggtagcaacatagaaaaacttgcaatgatatcaacaatcacaaagcaacatacaat 30267711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 44 - 300
Target Start/End: Original strand, 7702422 - 7702680
Alignment:
Q  44 tgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttac 143  Q
    |||||| ||||||||  |||||||| | ||||||| || |||| ||||| |||||||| ||||||||| | | |||||||||||||||||||| | ||||    
T  7702422 tgacatctagtaacacatgaaaattattactaaattaaaaaaaatgttattaattaaaattagtaacatttgtacaattgttaggtaaagcccatattac 7702521  T
Q  144 taaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcg-caaatattaccttattgtaacactttttgtatcatttgtaacaat 242  Q
    ||||| | |||||||||||||  ||| | |||| |||||| | ||||| |||||  |||| |||| ||||| ||||||||||||||||| | |||||| |    
T  7702522 taaagagctttagttacattttgtagtattatctgtaacatttaaaaattgtcgtaaaatgttacattattataacactttttgtatcactcgtaacact 7702621  T
Q  243 aaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtcca 300  Q
    |||||  | ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  7702622 aaaaagttattacatttataatttttgagaagttgtaaaaaatgtcgcaaaattgtcca 7702680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 340 - 476
Target Start/End: Complemental strand, 31342545 - 31342405
Alignment:
Q  340 ttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataa---tttcccccttcattgttctt 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||| ||||  |||||||    
T  31342545 ttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataaaagttcccctcttctctgttctt 31342446  T
Q  437 attcttgcataac-ataatgaactatgcaacacaatttgaa 476  Q
    |||||||||| || | ||| |||||||||||||||||||||    
T  31342445 attcttgcatgacgaaaataaactatgcaacacaatttgaa 31342405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 51 - 297
Target Start/End: Original strand, 24479152 - 24479400
Alignment:
Q  51 tagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtg 150  Q
    |||||||| ||||||||| | |||||||||||| || |||||||||||||||||||||||| | |||||||| ||||||||||| ||||||||||||| |    
T  24479152 tagtaacacttgaaaattattactaaatcaagataactgttactaattaaatttagtaacatttgaacaattcttaggtaaagctcgtgttactaaagag 24479251  T
Q  151 ttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcg-caaatattaccttattgtaacactttttgtatcatttgtaacaataaaaaag 249  Q
     |||||||| |||| |||| | ||||  ||||| |||||||||||||  |||  ||||  |||||||||| |||||||| ||    ||||||| |||||     
T  24479252 ctttagttatattttatagtattatctataacattcaaaaagtgtcgtaaaaggttacactattgtaacattttttgtaccaccattaacaattaaaaaa 24479351  T
Q  250 tgttacatttataatttttgagaagttgtaaa-agtgtcgcaaaattgt 297  Q
    | |||||||||| ||||||  ||||||||||| | ||| ||||||||||    
T  24479352 ttttacatttatcatttttatgaagttgtaaacaatgttgcaaaattgt 24479400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 41573372 - 41573489
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||| |||| | ||| |||||||||||||  |||| ||||||||||||||||||| |||||||||||||||||||||||| |  ||||||||||||||    
T  41573372 cactacaacaaaattgagatttagtaacattcaaaaaatgtaactaaatcaagaaaaatgttactaattaaatttagtaacagttaaacaattgttaggt 41573471  T
Q  130 aaagcccgtgttactaaa 147  Q
    ||| ||||||||||||||    
T  41573472 aaaccccgtgttactaaa 41573489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 633 - 746
Target Start/End: Original strand, 44921673 - 44921785
Alignment:
Q  633 ttttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataaacaatataatgcattcttaagcagtgg 732  Q
    |||||||| |||||||||||||||||||||| |||||||| |  ||| ||||||||||||| |||||||||||||||||||||||||||||||| | |||    
T  44921673 ttttcctt-tctttcttcttcaaatcttctcacatccttttacagtattcaactttttgttatgccaaaataaacaatataatgcattcttaagtattgg 44921771  T
Q  733 tcacatataaacta 746  Q
     |||||||||||||    
T  44921772 gcacatataaacta 44921785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 325 - 530
Target Start/End: Original strand, 44921419 - 44921619
Alignment:
Q  325 caaatttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctat--aatttccc 422  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||| | | ||||||||||| | |||||||||||||||||||  ||||||||    
T  44921419 caaatttgtctttgcttagacttcattcatatttgaattaac--atattagagaaatgttttaataaccaatttgaattacatactctataaaatttccc 44921516  T
Q  423 ccttcattgttcttattcttgcataa-cataatgaactatg-------caacacaatttgaattacatactaaaatgattacaagttttcatccaatgta 514  Q
    |      ||       |||| |||||  | |||||||||||       ||||||| ||||||||||||||||||| |||||||| |||||||||||||||    
T  44921517 c------tg-------tcttccataatgaaaatgaactatgcactatgcaacacattttgaattacatactaaaacgattacaaattttcatccaatgta 44921603  T
Q  515 acatgtactctataaa 530  Q
    ||||||||||||||||    
T  44921604 acatgtactctataaa 44921619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 48 - 298
Target Start/End: Original strand, 22966520 - 22966773
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaa--aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttacta 145  Q
    ||||||||||| ||||||| | | ||||||| || ||  || | |||||||| ||||||||| ||| |  ||||||||||||||||||||| ||||||||    
T  22966520 atttagtaacacttgaaaactattactaaataaaaaataaaatattactaatgaaatttagttacatttaaacaattgttaggtaaagcccctgttacta 22966619  T
Q  146 aagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgc-aaatattaccttattgtaacactttttgtatcatttgtaacaat-a 243  Q
    |||   ||||||||||||| | || | |||| |||||| || |||| || ||| |||| ||||| ||| | ||||||||||  ||||   |||||| | |    
T  22966620 aagacctttagttacattttagagtattatctgtaacattcgaaaaatgccgcaaaatgttacc-tatagcaacacttttttaatcaccagtaacattaa 22966718  T
Q  244 aaaaagtgttacatttataatttttgagaagttgtaaaagtgtcgcaaaattgtc 298  Q
    ||||| |||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  22966719 aaaaaatgttgcatttatcatttttgagaagttggaaaagtgtcgcaaaattgtc 22966773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 51 - 147
Target Start/End: Original strand, 11017457 - 11017553
Alignment:
Q  51 tagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    |||||||| |||||||  || ||||||| |||||||||||||||||||||||||||||||| | || |||||||||||||||| |||||||||||||    
T  11017457 tagtaacaattgaaaaccgttactaaataaagaaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 11017553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 64 - 305
Target Start/End: Complemental strand, 27151319 - 27151082
Alignment:
Q  64 aaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacatt 163  Q
    ||||||| ||||||||||||||| ||| |||||||||| ||||| ||||| | ||||||||     || |||| ||| ||||||| | ||  || |||||    
T  27151319 aaattgttactaaatcaagaaaaatgtcactaattaaaattagtgacacttgtacaattgt-----aacgcccatgtcactaaagagcttcggtaacatt 27151225  T
Q  164 tcatagaactatcggtaacaatcaaaaagtgtcgcaaa-tattaccttattgtaacactttttgtatcatttgtaacaat-aaaaaagtgttacatttat 261  Q
    | |||| | | |  |||| | |||||| |||||| ||| | ||||||||||||||||||||||||||||   |||||| | |||||| | ||||||||||    
T  27151224 ttatagtattct--gtaaaattcaaaatgtgtcgtaaaatgttaccttattgtaacactttttgtatcaccggtaacactaaaaaaaatattacatttat 27151127  T
Q  262 aatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaacta 305  Q
    ||||||| ||||||||| ||||||||||||||||| |||| ||||    
T  27151126 aatttttaagaagttgtaaaaagtgtcgcaaaattatccagacta 27151082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 51 - 282
Target Start/End: Original strand, 40016591 - 40016819
Alignment:
Q  51 tagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtg 150  Q
    |||||||| ||||||||| | | ||||||||| ||| ||||||| |||||||||||||||| | ||| ||||||||||||||| || | ||||||||| |    
T  40016591 tagtaacacttgaaaattattattaaatcaagtaaaatgttactgattaaatttagtaacatttgaataattgttaggtaaagaccctattactaaagag 40016690  T
Q  151 -ttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcg-caaatattaccttattgtaacactttttgtatcatttgtaacaataaaaaa 248  Q
     ||||| |||||||| || | | |||| |||||| ||||||||| |||  |||| |||| ||||      | |||| | |||||  ||||||||||||||    
T  40016691 attttaattacattttattgtattatctgtaacattcaaaaagtatcgtaaaatgttacattat-----aatttttagcatcatcagtaacaataaaaaa 40016785  T
Q  249 gtgttacatttataatttttgagaagttgtaaaa 282  Q
     | |||||||||||||||| ||||| ||||||||    
T  40016786 atattacatttataattttcgagaaattgtaaaa 40016819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 605 - 697
Target Start/End: Complemental strand, 15539122 - 15539030
Alignment:
Q  605 tccaagttgttgacactctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgc 697  Q
    |||| ||||||||  |||||||||||| | |||||| | |||||||||||||||||||| |||||||| |  ||| |||||||||||||||||    
T  15539122 tccatgttgttgatgctctacaaatttgtcttccttgtgtttcttcttcaaatcttctcacatccttttagagtattcaactttttgttctgc 15539030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 452 - 532
Target Start/End: Complemental strand, 15539341 - 15539261
Alignment:
Q  452 aatgaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaatgtaacatgtactctataaaat 532  Q
    |||||| ||||| ||||||||| ||||| |||||||||||||||||| ||||| ||||||||| |||| | ||||||||||    
T  15539341 aatgaattatgcgacacaatttcaattatatactaaaatgattacaaattttcttccaatgtagcatgcaatctataaaat 15539261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 45404810 - 45404711
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    ||||||||||| || ||||||||||||||||||| || || |||||||| ||| || | |||||| | || ||| |||||||||||||||||||||||||    
T  45404810 atttagtaacacttcaaaattgtaactaaatcaaaaacaactgttactatttagatcttgtaacatttga-caaatgttaggtaaagcccgtgttactaa 45404712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 456 - 511
Target Start/End: Original strand, 41573780 - 41573835
Alignment:
Q  456 aactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaat 511  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||| |||||||    
T  41573780 aactatacaacacaattttgattacatactaaaatgattacaagtttttatccaat 41573835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 30553814 - 30553888
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaattt 104  Q
    ||||||||||||||  |||||||| |||| |||||||||||||| | |||||||||| ||| | |||||||||||    
T  30553814 cactactacaataacaacatttagcaacacttgaaaattgtaacaacatcaagaaaaatgtcattaattaaattt 30553888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 454 - 498
Target Start/End: Complemental strand, 31342408 - 31342364
Alignment:
Q  454 tgaactatgcaacacaatttgaattacatactaaaatgattacaa 498  Q
    |||||||| |||||||||||||||||||||| |||||||||||||    
T  31342408 tgaactatacaacacaatttgaattacatacaaaaatgattacaa 31342364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 26734904 - 26734984
Alignment:
Q  221 tttttgtatcatttgtaacaataaaaaagtgttac--atttataatttttgagaagttgta-aaagtgtcgcaaaattgtc 298  Q
    ||||||||||||| |||||| |||||||  || ||  |||||||||| ||||||||||||| ||||||||||||| |||||    
T  26734904 tttttgtatcattagtaacattaaaaaaaagtcacttatttataattattgagaagttgtataaagtgtcgcaaagttgtc 26734984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 22967005 - 22967041
Alignment:
Q  340 ttagacttcattcatatttgaattaaccaatattaga 376  Q
    |||||||||||||||||||||||| ||||||||||||    
T  22967005 ttagacttcattcatatttgaattcaccaatattaga 22967041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 761 - 815
Target Start/End: Original strand, 44923931 - 44923985
Alignment:
Q  761 gtagcagcatggaaacacttgcaatgatatcaacaatcatagagcaatatacaat 815  Q
    |||||||||| |||| ||||||| ||||||||||||||| | ||||| |||||||    
T  44923931 gtagcagcatagaaaaacttgcactgatatcaacaatcacatagcaacatacaat 44923985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 15540401 - 15540317
Alignment:
Q  49 tttagtaacatttgaaaattgtaactaaatcaagaaaat-tgttactaattaaatttagtaacactcgaacaattgttaggtaaag 133  Q
    |||||||||||||||||| | | |||||||||  ||||| |||||||||||| || |||||||| |  |||||||| |||||||||    
T  15540401 tttagtaacatttgaaaagtattactaaatcacaaaaatatgttactaattatatctagtaaca-tttaacaattgataggtaaag 15540317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 26734754 - 26734830
Alignment:
Q  54 taacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaag 133  Q
    |||||||||||||||||   |||||||||||||   ||| ||||||||||||| || | | ||| |||||||||||||||    
T  26734754 taacatttgaaaattgt---taaatcaagaaaaaacttattaattaaatttagcaatatttgaataattgttaggtaaag 26734830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 365; Significance: 0; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 30 - 719
Target Start/End: Complemental strand, 9242605 - 9241897
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |    
T  9242605 cactactacaataatgacatttagcaacacttgaaaattgtaactaaatcaagaaaattgttactaattaaattttgtaacacttgaacaattgttagat 9242506  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    |||| || ||||||||||| ||||||||||||||| |||| | ||||  ||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  9242505 aaagtccatgttactaaagagttttagttacattttatagtattatctataacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtat 9242406  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || |  ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | | ||           |||| |||||||    
T  9242405 cactattaacaatgaaaaagtgttacatttataatttttgagaagttgtaaaaagtgtcgcaaaattgtctagatta--aatttttttgaatctaccaaa 9242308  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataatttcccccttca 428  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  9242307 tttgtcttcgcttaaacttcattcatatttgaattaaccaatattagatacaagttttaataacaagtttgaattacatactctacaattttccccttca 9242208  T
Q  429 ttgttcttattcttgcat------------------aacataat--gaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatcc 508  Q
     |||||||||||||||||                  |||| |||  ||||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  9242207 ctgttcttattcttgcataatgaaaatgaaatatgcaacacaattagaactatgcaacaaaatttgaatgtcatactaaaatgattacaagttttcatcc 9242108  T
Q  509 aatgtaacatgtactctataaaatatcccactgcactattattattcttccaaccatattatcagccttccattttcttttct--ttgattc-ttttgct 605  Q
    ||||||||||||||| ||||||||||| ||||||| | ||  ||||| |||||||||||||||||||||| ||||| ||||||  ||||||| ||||| |    
T  9242107 aatgtaacatgtactttataaaatatctcactgcattgttcctattcatccaaccatattatcagccttcaattttgttttctgcttgattctttttgtt 9242008  T
Q  606 ccaagttgttgacactctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataa 705  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||| |  ||| |||||||||||| ||||||||||||    
T  9242007 ccaagttgttgacactctacaaatttattttccttctctttcttcatcaaatctt---gcatccttttacagtattcaactttttgtcctgccaaaataa 9241911  T
Q  706 acaatataatgcat 719  Q
    ||||||||||||||    
T  9241910 acaatataatgcat 9241897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 396 - 807
Target Start/End: Original strand, 19746925 - 19747339
Alignment:
Q  396 tttgaattacatactctataa--tttcccccttcattgttcttattcttgcataacataatgaactatgcaacacaatttgaattacatactaaaatgat 493  Q
    |||||||||||| ||||||||  |||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  19746925 tttgaattacatgctctataaaatttcccccttcactgttcttattcttgaataacataatgaactatgcaatacaatttgaattacatgctaaaatgat 19747024  T
Q  494 tacaagttttcatccaatgtaacatgtactctataaaatatcccactgcactattattattcttccaaccatattatcagccttccattttcttttcttt 593  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||    
T  19747025 tacaagttttcatccaatgtaacatctactctataaaatatctcactgcactgttcttattcttccaaccatattatcagccttccattttgttttcttt 19747124  T
Q  594 gattctttt-gctccaagttgttgacactctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgt 692  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  19747125 gattctttttgctccaagttgttgacactctacaaatttcttttccttctctttcttcttcaaatcttctcgcatcctttaatagtattcaactttttgt 19747224  T
Q  693 tctgccaaaataaacaatataatgcattcttaagcagtggtcacatataaactacaagatagtcacatgtagcagcatggaaacacttgcaatgatatca 792  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  19747225 tcagccaaaataaacaatataatgcatgcttaagcagtggtcacatataaactacaagatagtcacaggtagcagcatagaaacacttgcaatgatatca 19747324  T
Q  793 acaatcatagagcaa 807  Q
    ||||||| |||||||    
T  19747325 acaatcacagagcaa 19747339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 30 - 476
Target Start/End: Complemental strand, 4685524 - 4685076
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||| |||||| |||||||||||||||    
T  4685524 cactactacaataatggcaattagtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagcaacacttgaacaattgttaggt 4685425  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    ||||||||| ||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  4685424 aaagcccgtattactaaagtgttttagttacattttatagtactatctgtaacaatcaaaaagtgtcgcaaatggtaccttattgtaacactttttgtat 4685325  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||            |||||||||||    
T  4685324 cacttgtaacaataaaaaagtgttacatttataatttttgaggagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt---aatttaccaaa 4685228  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataa---tttccccct 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||  ||    
T  4685227 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataaaagttcccatct 4685128  T
Q  426 tcattgttcttattcttgcataac-ataatgaactatgcaacacaatttgaa 476  Q
    |||  | |||||||||||||| || | ||| |||||||||||||||||||||    
T  4685127 tcacagatcttattcttgcatgacgaaaataaactatgcaacacaatttgaa 4685076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 514 - 815
Target Start/End: Original strand, 10022512 - 10022817
Alignment:
Q  514 aacatgtactctataaaatatcccactgcactattattattcttccaaccatattatcagccttccattttcttttct--ttgattctttt-gctccaag 610  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||||||  ||||||||||| |||| |||    
T  10022512 aacatgtactctataaaatatcccattgcactgttcttattcttccaaccatattatcagccttccattttgttttctgcttgattctttttgctctaag 10022611  T
Q  611 ttgttgacactctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataaacaat 710  Q
    |||| ||| |||||||||||| |||| ||| ||||||||||||||||||| ||||||||||| |  ||| ||||||||||||| | ||||||||||||||    
T  10022612 ttgtggacgctctacaaatttctttttcttgtctttcttcttcaaatcttttcgcatccttttacagtattcaactttttgttttaccaaaataaacaat 10022711  T
Q  711 ataatgcattcttaagcagtggtcacatataaactacaagatagtcacatg-tagcagcatggaaacacttgcaatgatatcaacaatcatagagcaata 809  Q
    ||||||||| ||||| ||||||||||||||||| || |||||||||| | | ||||||||| |||| ||||| ||||||||||||||| | ||||| | |    
T  10022712 ataatgcatgcttaatcagtggtcacatataaattataagatagtcataggttagcagcatagaaaaacttggaatgatatcaacaatgacagagcgaca 10022811  T
Q  810 tacaat 815  Q
    ||||||    
T  10022812 tacaat 10022817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 29 - 428
Target Start/End: Original strand, 10022102 - 10022491
Alignment:
Q  29 acactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttagg 128  Q
    ||||| ||| |||||||||||||||||||| |||||||||||||||||||||  |||| ||||||||||||| |||||||||||  ||||||||||||||    
T  10022102 acactgctaaaataatgacatttagtaacaattgaaaattgtaactaaatcagaaaaaatgttactaattaagtttagtaacacatgaacaattgttagg 10022201  T
Q  129 taaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgta 228  Q
    |||||| |||||||||||||  |||||||||||||| |||  |||||| |||||||| ||||||||||||||            ||| ||| || |||||    
T  10022202 taaagctcgtgttactaaagaattttagttacattttatattactatctgtaacaattaaaaagtgtcgcaa------------tgttaca-ttattgta 10022288  T
Q  229 tcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgtaaaagtgtcgcaaaattgtccaaacta-nnnnnnnnnnngaatttaccaa 327  Q
    |||   ||||||||||||||| || ||||||||||||||||||||||   |||||||||||||||||||  | ||||             ||||||| ||    
T  10022289 tcaccggtaacaataaaaaagagtaacatttataatttttgagaagtgtcaaaagtgtcgcaaaattgtttagactatttttttttttataatttacaaa 10022388  T
Q  328 atttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactc--tataatttccccct 425  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||||||||||| ||||||||||||||||||  || |||||||||||    
T  10022389 atttgtctttgcttagacttcattcatattataattaatcaatattacatacaagttttaataaccagtttgaattacatactccataaaatttccccct 10022488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 51 - 378
Target Start/End: Complemental strand, 20277460 - 20277131
Alignment:
Q  51 tagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtg 150  Q
    |||||||| | |||||||||||||||||||| |||| | ||| |||||||||||||||||| |  ||||||||||||||||||| | ||||||||||| |    
T  20277460 tagtaacactcgaaaattgtaactaaatcaaaaaaaatattattaattaaatttagtaacatttaaacaattgttaggtaaagcacctgttactaaagag 20277361  T
Q  151 ttttagttacatttcatagaactatcggtaacaatcaaaaag-tgtcgcaaa-tattaccttattgtaacactttttgtatcatttgtaacaataaaaaa 248  Q
     ||||||||||||  |||| | |||| |||||||| |||||  ||| ||||| | |||  |||||| ||||||||||||||||    |||| ||||||||    
T  20277360 ctttagttacattatatagtattatctgtaacaataaaaaaaatgtagcaaaatgttatattattgaaacactttttgtatcaccaataacgataaaaaa 20277261  T
Q  249 gtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaatttgtctttgcttagactt 347  Q
     ||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||           ||||  || ||||||||||||| ||||||||    
T  20277260 atgttacatttataatttttgagaagttgtaaaaagtgtcgtaaaattgtctaaacta-aaaaaaatatgaatcaactaaatttgtctttgtttagactt 20277162  T
Q  348 cattcatatttgaattaaccaatattagata 378  Q
    || ||||||||||||||||||||||||||||    
T  20277161 cagtcatatttgaattaaccaatattagata 20277131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 26225099 - 26224935
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||||    
T  26225099 cactactacaataatgacatttaataacacttgaaaattgtaactaaatcaagaaaaatgatactaattaaatttagtaacacttgaacaattattaggt 26225000  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtg 194  Q
    |||||| |||||||||||| ||||||||| ||||| |||  |||| | |||||||||||||||||    
T  26224999 aaagccggtgttactaaagagttttagtttcattttataatactacctgtaacaatcaaaaagtg 26224935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 26205536 - 26205372
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| ||||| |||||    
T  26205536 cactactacaataatgacatttagtgacacttgaaaattataactaaatcaagaaaaatgttactaattaaatttagtaacacttgaaaaattggtaggt 26205437  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtg 194  Q
    |||||  |||||||||||| ||||||||| ||||| |||| ||||   |||||||||||||||||    
T  26205436 aaagctggtgttactaaagagttttagtttcatttgatagtactacttgtaacaatcaaaaagtg 26205372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 44 - 275
Target Start/End: Complemental strand, 26608646 - 26608413
Alignment:
Q  44 tgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttac 143  Q
    |||||| |||||||||||||||||||| |  |||||||||||| ||||||| |||||||||||||||| | ||||||||||||| |||||||| ||||||    
T  26608646 tgacatctagtaacatttgaaaattgttatgaaatcaagaaaaatgttactgattaaatttagtaacatttgaacaattgttagataaagcccatgttac 26608547  T
Q  144 taaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgc-aaatattaccttattgtaacac-tttttgtatcatttgtaacaa 241  Q
    ||||| | ||||||| ||||| |||| ||||||  |||||||||||||||||||| |||| |||| ||||||||| || ||||| |||||   ||||||     
T  26608546 taaagagctttagttgcattttatagtactatctataacaatcaaaaagtgtcgcaaaatgttacattattgtaagacttttttttatcaccggtaacac 26608447  T
Q  242 taaaaaagtgttacatttataatttttgagaagt 275  Q
    ||||||| || || |||||||||| || ||||||    
T  26608446 taaaaaaatgctatatttataattctttagaagt 26608413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 44 - 298
Target Start/End: Complemental strand, 26619209 - 26618957
Alignment:
Q  44 tgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttac 143  Q
    |||||| |||||||| |||||| |||| ||||||||||||||| ||||||| |||||||||| ||||| | ||||||||| |||||||| ||  ||||||    
T  26619209 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttattaacatttgaacaattg-taggtaaatcctatgttac 26619112  T
Q  144 taaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgc-aaatattaccttattgtaacactttttgtatcatttgtaacaat 242  Q
    |||||   ||||||||||||| |||| | |||  |||||| |||||||||||||| ||||  ||| |||||||||||||||||||||||    ||||| |    
T  26619111 taaagaactttagttacatttgatagtattatttgtaacattcaaaaagtgtcgcaaaatgctacattattgtaacactttttgtatcaccgataacact 26619012  T
Q  243 aaaaa-agtgttacatttataatttttgagaagttgtaaaagtgtcgcaaaattgtc 298  Q
    ||||| | |||||||||||||||||||| |||||   |||| |||||||||||||||    
T  26619011 aaaaataatgttacatttataatttttgggaagt--aaaaaatgtcgcaaaattgtc 26618957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 45 - 298
Target Start/End: Complemental strand, 26621197 - 26620946
Alignment:
Q  45 gacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttact 144  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||| ||||||| ||||||||||| |||| |  |||||||||||| ||||  || |||||||    
T  26621197 gacatctagtaacacttgaaaattgttactaaattaagaaaaatgttactgattaaatttagcaacatttaaacaattgttagataaaagccatgttact 26621098  T
Q  145 aaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtc-gcaaatattaccttattgtaacactttttgtatcatttgtaacaata 243  Q
    |||| | ||||||||||||| |||| | |||| |||||| ||||||||||||   |||| |||| |||||| ||||||| ||||||||    ||||| ||    
T  26621097 aaagagctttagttacattttatagtattatctgtaacattcaaaaagtgtcataaaatgttacattattgcaacacttgttgtatcaccgataacacta 26620998  T
Q  244 aaaaagtgttacatttataatttttgagaagttgtaaaagtgtcgcaaaattgtc 298  Q
    ||||| ||||||||| ||||||||| ||||   |||||| ||| |||||||||||    
T  26620997 aaaaaatgttacattcataattttttagaa---gtaaaaatgttgcaaaattgtc 26620946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 30 - 159
Target Start/End: Original strand, 16170250 - 16170379
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    ||||||| |||||||||||||||| |||| |||||||||||||| ||||||  |||| ||||||||||||||||||||||||||  ||||||||||||||    
T  16170250 cactactgcaataatgacatttagcaacacttgaaaattgtaaccaaatcacaaaaagtgttactaattaaatttagtaacacttaaacaattgttaggt 16170349  T
Q  130 aaagcccgtgttactaaagtgttttagtta 159  Q
    |||  |  |||||||| |||||||||||||    
T  16170350 aaaatcaatgttactagagtgttttagtta 16170379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 30089728 - 30089880
Alignment:
Q  44 tgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttac 143  Q
    |||||| |||||||| ||||||| ||| ||||||||||||||| ||||||| |||| ||||||||||| | |||||||||||||| ||||||| ||||||    
T  30089728 tgacatctagtaacacttgaaaactgttactaaatcaagaaaaatgttactgattatatttagtaacatttgaacaattgttaggaaaagcccatgttac 30089827  T
Q  144 taaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtc 196  Q
    ||||| | ||||||||||||| |||| | |||   ||||| ||||||||||||    
T  30089828 taaagagctttagttacattttatagtattatttttaacattcaaaaagtgtc 30089880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 220 - 364
Target Start/End: Original strand, 19746791 - 19746933
Alignment:
Q  220 ctttttgtatcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnnga 318  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |           ||    
T  19746791 ctttttgtatctcttgtaacaataaaaaagtgttacatttataatttttgagaagttgtaaaaagtgtcgcaaaattgtctaaacaa---atttttttga 19746887  T
Q  319 atttaccaaatttgtctttgcttagacttcattcatatttgaatta 364  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||||    
T  19746888 atttatcaaatttgtctttgcgtagactttattcatatttgaatta 19746933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 178 - 297
Target Start/End: Original strand, 3374524 - 3374646
Alignment:
Q  178 gtaacaatcaaaaagtgtcgcaaa-tattaccttattgtaacactttttgtatcatttgtaacaataaaaaagtgttacatttataatttttgagaagtt 276  Q
    |||||| ||||||||| ||||||| ||| || |||||||||||||||||||||||   |||||||||||||||||||||||||||||||||| |||||||    
T  3374524 gtaacattcaaaaagtatcgcaaaatatcacattattgtaacactttttgtatcaccagtaacaataaaaaagtgttacatttataattttttagaagtt 3374623  T
Q  277 gtaa--aagtgtcgcaaaattgt 297  Q
    ||||  |||||| ||||||||||    
T  3374624 gtaaagaagtgttgcaaaattgt 3374646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 48 - 282
Target Start/End: Original strand, 8241595 - 8241828
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    ||||||||| | ||| ||||||||||||||| |||||||| |||||| ||| |||||| ||| | | ||||| ||||||| ||||  || ||||| ||||    
T  8241595 atttagtaatacttggaaattgtaactaaatgaagaaaat-gttactgattgaatttaataatatttgaacagttgttagataaaatccatgttattaaa 8241693  T
Q  148 gtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaa-atattaccttattgtaacactttttgtatcatttgtaacaataaaa 246  Q
    |   || |||||||| | |||  | |||| |||| ||| |||||||| || || || |||  ||||||||||||||||||||||| | ||||||||||||    
T  8241694 gaacttcagttacatattataatattatccgtaaaaataaaaaagtgccgtaatatgttagattattgtaacactttttgtatcactagtaacaataaaa 8241793  T
Q  247 aagtgttacatttataatttttgagaagttgtaaaa 282  Q
    || | ||| ||| |||| ||||||||| ||||||||    
T  8241794 aaatattatattcataa-ttttgagaaattgtaaaa 8241828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 3234324 - 3234424
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaa-ttgttaggtaaagcccgtgttactaa 146  Q
    ||||||||||| ||||||| ||||||||||| || |||| || |||||| | |||||||||||| | || ||| || |||||||||| ||||||||||||    
T  3234324 atttagtaacagttgaaaaatgtaactaaataaaaaaaaatggtactaaattaatttagtaacatttgaccaatttattaggtaaagtccgtgttactaa 3234423  T
Q  147 a 147  Q
    |    
T  3234424 a 3234424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 515
Target Start/End: Complemental strand, 20277060 - 20276995
Alignment:
Q  452 aatgaactatgcaacacaatt--tgaattacatactaaaatgattacaagttttcatccaatgtaa 515  Q
    |||||||||||||||||||    ||||||||||||||||||||||  |||||||||||||||||||    
T  20277060 aatgaactatgcaacacaaaaggtgaattacatactaaaatgatttaaagttttcatccaatgtaa 20276995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 3364981 - 3365096
Alignment:
Q  50 ttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagccc-gtgttactaaa 147  Q
    ||||||||| || ||||||||||||||||||| || ||||||||||| ||| || | |||||| | | |||| ||||||||||||||| |||||||||||    
T  3364981 ttagtaacactttaaaattgtaactaaatcaaaaacaattgttactatttagatcttgtaacatttg-acaaatgttaggtaaagcccggtgttactaaa 3365079  T
Q  148 gtgttttagttacattt 164  Q
       ||||||| ||||||    
T  3365080 tgattttagtaacattt 3365096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 512
Target Start/End: Original strand, 19111398 - 19111446
Alignment:
Q  464 aacacaatttgaattacatactaaaatgattacaagttttcatccaatg 512  Q
    |||||||||| |||||||||||||||||||||||  |||||||||||||    
T  19111398 aacacaatttcaattacatactaaaatgattacatattttcatccaatg 19111446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 16086501 - 16086580
Alignment:
Q  65 aattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttact 144  Q
    |||||| | |||||||  |||| |||||||||||||||||| ||||| | ||| |||||||||||||||| | |||||||    
T  16086501 aattgttattaaatcagaaaaactgttactaattaaatttaataacatttgaataattgttaggtaaagctcatgttact 16086580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 320 - 374
Target Start/End: Original strand, 3374646 - 3374700
Alignment:
Q  320 tttaccaaatttgtctttgcttagacttcattcatatttgaattaaccaatatta 374  Q
    |||| ||||||||| ||| |||| ||||||||||| |||||||||||||||||||    
T  3374646 tttatcaaatttgtatttacttaaacttcattcatgtttgaattaaccaatatta 3374700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 147
Target Start/End: Complemental strand, 7711466 - 7711361
Alignment:
Q  42 aatgacatttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgt 140  Q
    ||||| ||||||||||| ||  |||||||||||||||||| || || |||||||| ||| || | |||||| | ||  ||| ||||||||||||||||||    
T  7711466 aatgagatttagtaacacttctaaattgtaactaaatcaaaaacaaatgttactatttagatcttgtaacatttgatgaat-gttaggtaaagcccgtgt 7711368  T
Q  141 tactaaa 147  Q
    |||||||    
T  7711367 tactaaa 7711361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 931 - 969
Target Start/End: Original strand, 19747467 - 19747505
Alignment:
Q  931 tgaagaagaaggatgaaactgaagcaatccagagatatt 969  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  19747467 tgaagaagaatgatgaaactgaagcaatccagagatatt 19747505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 147
Target Start/End: Original strand, 28312668 - 28312772
Alignment:
Q  43 atgacatttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgtt 141  Q
    |||| ||||||||||| || ||||||| ||||||||||| || || |||||||| ||| || | |||||| |   |||| ||||||||||||||||||||    
T  28312668 atgagatttagtaacaattcaaaattgcaactaaatcaaaaacaaatgttactatttagatcttgtaaca-tttcacaaatgttaggtaaagcccgtgtt 28312766  T
Q  142 actaaa 147  Q
    ||||||    
T  28312767 actaaa 28312772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 492 - 532
Target Start/End: Complemental strand, 29932027 - 29931987
Alignment:
Q  492 attacaagttttcatccaatgtaacatgtactctataaaat 532  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  29932027 attacaagttttcatccaatgaaacatatactctataaaat 29931987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 2931755 - 2931696
Alignment:
Q  452 aatgaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaat 511  Q
    |||||| ||||||||||||||| |||||||||||| ||  |||| ||||||| |||||||    
T  2931755 aatgaagtatgcaacacaatttcaattacatactataactattagaagtttttatccaat 2931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 147
Target Start/End: Original strand, 26701098 - 26701127
Alignment:
Q  118 caattgttaggtaaagcccgtgttactaaa 147  Q
    ||||||||||||||||||||||||||||||    
T  26701098 caattgttaggtaaagcccgtgttactaaa 26701127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 27135958 - 27136031
Alignment:
Q  80 aagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtgttt 153  Q
    ||||||| ||||| | |||| || || ||||| | ||||||||||||| ||||||| |||||||||||| ||||    
T  27135958 aagaaaaatgttattgattatatctaataacatttgaacaattgttagataaagcctgtgttactaaagagttt 27136031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 364; Significance: 0; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 30 - 759
Target Start/End: Original strand, 6684073 - 6684835
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||| |||||||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  6684073 cactactacaataatggcatttagtaacacttaaaaattgtaacttaatcaagaaaaatgttactaattaaatttagtaacactcgaaca-ttgttaggt 6684171  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggt-------aacaatcaaaaagtgtcgcaaatattaccttattgtaacactt 222  Q
    |||| || ||||||||||| ||||||||||||||| |||| | ||||  |       |||||| |||||||||||||||| |||  ||||||||||||||    
T  6684172 aaagtccatgttactaaagagttttagttacattttatagtattatctattatctataacaattaaaaagtgtcgcaaatgttatattattgtaacactt 6684271  T
Q  223 tttgtatcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgtaaaa-gtgtcgcaaaattgtccaaactannnnnnnnnnngaatt 321  Q
     |||||||| | |||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||| ||||||           ||||     
T  6684272 cttgtatcactagtaacaataaaatagtgttacgtttataaattttgagaagttgtaaaaagtgtcgcaaaattgtctaaactaaagtttctt--gaatc 6684369  T
Q  322 taccaaatttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataattt-c 420  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |    
T  6684370 taccaaatttttctttacttagacttcattcatatttgaattaaccaatattagatacaagttttaataacaagtttgaattacatactctaaaattttc 6684469  T
Q  421 ccccttcattgttcttattcttgcataa------------------cataat--gaactatgcaacacaatttgaattacatactaaaatgattacaagt 500  Q
    ||||||||  ||||||||||||||||||                  || |||  ||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  6684470 ccccttcaccgttcttattcttgcataatgaaaatgaattgtgcaacacaattagaactatgcaacacaatttgaatgacatactaaaacgattagaagt 6684569  T
Q  501 tttcatccaatgtaacat----gtactctataaaatatcccactgcactattattattcttccaaccatattatcagccttccattttcttttct--ttg 594  Q
    ||||||||||||||||||    ||||||||||||||||||||||||||| || |||||| ||||||||||||||||||| |||||||| ||||||  |||    
T  6684570 tttcatccaatgtaacatctatgtactctataaaatatcccactgcactgttcttattcatccaaccatattatcagccgtccattttgttttctgcttg 6684669  T
Q  595 attctttt-gctccaagttgttgacactctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgtt 693  Q
    ||| |||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| |  ||| ||||||||||||     
T  6684670 attatttttgctccaagttgttgacactctacaaatttattttcctcgtctttcttcttcaaatcttcttgcatccttttacagtattcaactttttgtc 6684769  T
Q  694 ctgccaaaataaacaatataatgcattcttaagcagtggtcacatataaactacaagatagtcaca 759  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  6684770 ctgccaaaatagacaatataatgcatgcttaagcagtggtcacatataaactataagatagtcaca 6684835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 29 - 719
Target Start/End: Complemental strand, 14669468 - 14668757
Alignment:
Q  29 acactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttagg 128  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||| ||||||||||    
T  14669468 acactactacaataatgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattttgcaacactcgaataattgttagg 14669369  T
Q  129 taaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgta 228  Q
    ||||| |||||||||||||| ||||||||||||||| |||| | |||  |||||||| |||||||||| ||||| |||| ||||||||||||||||||||    
T  14669368 taaagtccgtgttactaaagagttttagttacattttatagtattatttgtaacaattaaaaagtgtcacaaatgttacattattgtaacactttttgta 14669269  T
Q  229 tcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaa 327  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| || | ||||           |||| ||||||    
T  14669268 tcactagtaacaataaaaaagtgttacatttataatttttgagaagtcgtaaaaagtgtcgcaaaattatctagacta--aatttttttgaatctaccaa 14669171  T
Q  328 atttgtctttgctta---gacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataatttccccc 424  Q
    |||| |||| |||||    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  14669170 atttatcttcgcttaaattacttcattcatatttgaattaaccaatattagatacaagttttaataacaagtttgaattacatactctacaatttccccc 14669071  T
Q  425 ttcattgttcttattcttgcataa-cataatga-------------------actatgcaacacaatttgaattacatactaaaatgattacaagttttc 504  Q
    |||| |||||||||||||||||||  | |||||                   |||||||||||||||||||||  ||||||||||| |||||||||||||    
T  14669070 ttcagtgttcttattcttgcataatgaaaatgaaatatgcaacacaactagaactatgcaacacaatttgaatgtcatactaaaataattacaagttttc 14668971  T
Q  505 atccaatgtaacatgtactctataaaatatcccactgcactattattattcttccaaccatattatcagccttccattttcttttct--ttgattc-ttt 601  Q
    ||||||||||||||||||||||||||||||||||||||| | ||  ||||| |||||||||||||||||||||||||||| ||||||  ||||||| |||    
T  14668970 atccaatgtaacatgtactctataaaatatcccactgcattgttcctattcatccaaccatattatcagccttccattttgttttctgcttgattctttt 14668871  T
Q  602 tgctccaagttgttgacactctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaa 701  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||   ||||||||| |   || |||||||||||| || |||||    
T  14668870 tgttccaagttgttgacactcta-aaatttattttccttctctttcttcatcaaatctt---gcatccttttacaatattcaactttttgtcctaccaaa 14668775  T
Q  702 ataaacaatataatgcat 719  Q
    ||||||||||||||||||    
T  14668774 ataaacaatataatgcat 14668757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 29 - 719
Target Start/End: Complemental strand, 17719845 - 17719136
Alignment:
Q  29 acactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttagg 128  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||| ||| | ||||||||||||||||||||     
T  17719845 acactactacaataatgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaatttttgcaacactcgaacaattgttaga 17719746  T
Q  129 taaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgta 228  Q
    ||||| |||||||||||||| |||||||||||| || |||| | |||| |||||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  17719745 taaagtccgtgttactaaagagttttagttacaatttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgta 17719646  T
Q  229 tcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaa 327  Q
    ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||           |||| | ||||    
T  17719645 tcactagtaacaataaaaaagtgttacatttataatttttgagaagttgtaaaaagtgtcgcaaaattgtctaaacta-aaatttttttgaatctcccaa 17719547  T
Q  328 atttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataatttcccccttc 427  Q
    |||||||||  |||| |||||||||| ||| |||||||||||||| | ||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  17719546 atttgtcttcacttaaacttcattcagattagaattaaccaatatcatatacaagttttaataacaagtttgaattacattctctacaatttcccccttc 17719447  T
Q  428 attgttcttattcttgcataa-cataatgaactatgc-------------------aacacaatttgaattacatactaaaatgattacaagttttcatc 507  Q
    |    || |||||||||||||  | |||||| |||||                   ||||||||||||||  |||||||||||||||||||||||||||     
T  17719446 a--cctcgtattcttgcataatgaaaatgaaatatgcaacacaattagaactatgcaacacaatttgaatgtcatactaaaatgattacaagttttcatt 17719349  T
Q  508 caatgtaacatgtactctataaaatatcccactgcactattattattcttccaaccatattatcagccttccattttctttt---ctttgattc-ttttg 603  Q
    |||||||||||||||||||||||||||||||||| | | ||  ||||| |||||||||||||||||||||||||||| ||||   ||||||||| |||||    
T  17719348 caatgtaacatgtactctataaaatatcccactgaattgttcatattcatccaaccatattatcagccttccattttgttttctgctttgattctttttg 17719249  T
Q  604 ctccaagttgttgacactctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaat 703  Q
     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||| |  ||| |||||||||||| ||||||||||    
T  17719248 ttccaagttgttgacactctacaaatttattttccttctctttcttcatcaaatctt---gcatccttttacagtattcaactttttgtcctgccaaaat 17719152  T
Q  704 aaacaatataatgcat 719  Q
    ||||||||||||||||    
T  17719151 aaacaatataatgcat 17719136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 28 - 476
Target Start/End: Original strand, 15361692 - 15362142
Alignment:
Q  28 aacactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttag 127  Q
    ||||||||||||||||||  | ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||    
T  15361692 aacactactacaataatggtaattagtaacacttaaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttag 15361791  T
Q  128 gtaaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgt 227  Q
    |||||||| ||||||||||| |||||||||||||||| |||| |||||| |||||||||||||||||| ||||||  ||||||||||||| |||||||||    
T  15361792 gtaaagccggtgttactaaaatgttttagttacattttatagtactatctgtaacaatcaaaaagtgttgcaaatggtaccttattgtaaaactttttgt 15361891  T
Q  228 atcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttacca 326  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||            |||||||||    
T  15361892 atcacttgtaacaataaaaaagtgttacatttataatttttgaggagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt---aatttacca 15361988  T
Q  327 aatttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataa---tttcccc 423  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || |||     
T  15361989 aatttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataaaagttcccct 15362088  T
Q  424 cttcattgttcttattcttgcataac-ataatgaactatgcaacacaatttgaa 476  Q
    ||||  ||||||||||||||||| || | ||| |||||||||||||||||||||    
T  15362089 cttctctgttcttattcttgcatgacgaaaataaactatgcaacacaatttgaa 15362142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 29 - 476
Target Start/End: Original strand, 16734783 - 16735232
Alignment:
Q  29 acactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttagg 128  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||| | ||||||||||||||    
T  16734783 acactactacaataatggcaattagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacatttgaacaattgttagg 16734882  T
Q  129 taaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgta 228  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||| ||||||||  ||||||||||||||||||| ||||    
T  16734883 taaagcccgtgttactaaagtgttttagttacattttatagtactatctgtaacaatcaaaaagtatcgcaaatggtaccttattgtaacactttctgta 16734982  T
Q  229 tcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaa 327  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||            ||||||||||    
T  16734983 tcacttgtaacaataaaaaagtgttacatttataatttttgaggagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt---aatttaccaa 16735079  T
Q  328 atttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataa---tttccccc 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   || ||| |    
T  16735080 atttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttcaattacatactctataaaagttcccctc 16735179  T
Q  425 ttcattgttcttattcttgcat-aacataatgaactatgcaacacaatttgaa 476  Q
    |||  ||||||||||||||||| |  | ||| ||||||||| |||||||||||    
T  16735180 ttctctgttcttattcttgcatgaggaaaataaactatgcagcacaatttgaa 16735232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 38 - 472
Target Start/End: Original strand, 12591820 - 12592255
Alignment:
Q  38 caataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccg 137  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  12591820 caataatgacatttagtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagtaacgctcgaacaattgttaggtaaagcccg 12591919  T
Q  138 tgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtatcatttgta 237  Q
    ||||||||||| |||||||||||| || |||| | |||| |||||||| |||||||||||||||| |||| ||||||||||||||||||||||| | ||     
T  12591920 tgttactaaagagttttagttacaatttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtc 12592019  T
Q  238 acaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaatttgtctt 336  Q
    ||||||||||||||||||  ||||||||||||||||||||| |||||||||||||| ||||| | | ||           | || |||||||||||||||    
T  12592020 acaataaaaaagtgttactattataatttttgagaagttgtaaaaagtgtcgcaaatttgtctagaata--aaaaaatttggatctaccaaatttgtctt 12592117  T
Q  337 tgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataatt-tcccccttcattgttct 435  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||| ||||||||||| |||||    
T  12592118 tgcttagacttccttcatatttgaattaaccaatattaaatacaagttttaataacaagtttgaattacatactctaaaattctcccccttcatggttct 12592217  T
Q  436 tattcttgcataa-cataatgaactatgcaacacaatt 472  Q
    |||||||||||||  | |||||| ||||||||||||||    
T  12592218 tattcttgcataatgaaaatgaattatgcaacacaatt 12592255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 30 - 297
Target Start/End: Complemental strand, 11936888 - 11936620
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| |    
T  11936888 cactactacaataatggcaattagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttagat 11936789  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| ||||| ||||||||||  |||||||||||||||||||||||||    
T  11936788 aaagcccgtgttactaaagtgttttagttacattttatagtactatctgtaacaataaaaaaatgtcgcaaatggtaccttattgtaacactttttgtat 11936689  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgt 297  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  11936688 cacttgtaacaataaaaaagtgttacatttataatttttgaggagttgtaaaaagtgttgcaaaattgt 11936620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 63 - 297
Target Start/End: Complemental strand, 11948835 - 11948600
Alignment:
Q  63 aaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacat 162  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11948835 aaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttagataaagcccgtgttactaaagtgttttagttacat 11948736  T
Q  163 ttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtatcatttgtaacaataaaaaagtgttacatttata 262  Q
    || |||| |||||| |||||||| ||||| ||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11948735 tttatagtactatctgtaacaataaaaaaatgtcgcaaatggtaccttattgtaacactttttgtatcacttgtaacaataaaaaagtgttacatttata 11948636  T
Q  263 atttttgagaagttgt-aaaagtgtcgcaaaattgt 297  Q
    ||||||||| |||||| |||||||| ||||||||||    
T  11948635 atttttgaggagttgtaaaaagtgttgcaaaattgt 11948600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 29 - 276
Target Start/End: Original strand, 10070635 - 10070879
Alignment:
Q  29 acactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttagg 128  Q
    |||||||||||||| |||| |||||||||| ||  || || |||||||||||| ||||||||||||||||||||||| |||||||| || |||||||| |    
T  10070635 acactactacaatattgacgtttagtaacactt--aagttataactaaatcaacaaaattgttactaattaaatttaataacactcaaataattgttacg 10070732  T
Q  129 taaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgta 228  Q
    ||||| |||||||||||||  ||||||||||||||| |||| | |||  ||||||||  ||||||||||||||| |||| ||||||||||||||||||||    
T  10070733 taaagtccgtgttactaaaa-gttttagttacattttatagtattatttgtaacaatttaaaagtgtcgcaaatgttacattattgtaacactttttgta 10070831  T
Q  229 tcatttgtaacaataaaaaagtgttacatttataatttttgagaagtt 276  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  10070832 tcattagtaacaataaaaaagtgttacatttataatttttgaaaagtt 10070879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 557 - 759
Target Start/End: Original strand, 12592308 - 12592513
Alignment:
Q  557 tccaaccatattatcagccttccattttcttttct--ttgattctttt-gctccaagttgttgacactctacaaatttattttccttctctttcttcttc 653  Q
    |||||||||||||||||||||||||||| |||||   ||||||||||| ||||| |||||||||  ||||||||||||||||||||| ||||||||||||    
T  12592308 tccaaccatattatcagccttccattttgttttccgcttgattctttttgctcctagttgttgatgctctacaaatttattttccttgtctttcttcttc 12592407  T
Q  654 aaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataaacaatataatgcattcttaagcagtggtcacatataaactacaagata 753  Q
    ||||||||||||||||||| |  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||  |||||||||||| ||| ||||||    
T  12592408 aaatcttctcgcatccttttacagtattcaactttttgtcctgccaaaataaacaatacaatgcatgcttaagcaaaggtcacatataagctataagata 12592507  T
Q  754 gtcaca 759  Q
    ||||||    
T  12592508 gtcaca 12592513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 34 - 142
Target Start/End: Original strand, 15690421 - 15690529
Alignment:
Q  34 actacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaag 133  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| |||||    
T  15690421 actacaataaagacatttagtaacatttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagtgacactcaaacaattgttagctaaag 15690520  T
Q  134 cccgtgtta 142  Q
     || |||||    
T  15690521 tccatgtta 15690529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 23264587 - 23264499
Alignment:
Q  60 ttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaag 148  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  23264587 ttgaaaattgttactaaatcaagaaaattgttactaattaaatttagtaacattcgaacaattgttaggtaaaatccgtgttactaaag 23264499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 48 - 282
Target Start/End: Original strand, 1942566 - 1942793
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    |||| ||||||||||| |||||||||||||||||||||| | ||||| || ||||||| ||||| | || |||||| |||||||| ||  ||||| ||||    
T  1942566 atttggtaacatttgataattgtaactaaatcaagaaaaatattactgataaaatttaataacatttgagcaattgctaggtaaaacctttgttattaaa 1942665  T
Q  148 gtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgc-aaatattaccttattgtaacactttttgtatcatttgtaacaataaaa 246  Q
        ||||||||||||| |||| | |||| |||||||| ||||  |||||| |||| |||| |||||||||||  |||||||||||        ||||||    
T  1942666 tatctttagttacattttatagtattatctgtaacaattaaaatatgtcgcaaaatgttacattattgtaacatcttttgtatcat--------ataaaa 1942757  T
Q  247 aagtgttacatttataatttttgagaagttgtaaaa 282  Q
    || ||||||||| ||||||||| | |||||||||||    
T  1942758 aaatgttacattcataattttttaaaagttgtaaaa 1942793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 29668015 - 29667902
Alignment:
Q  53 gtaacatttgaaaattgtaactaaatcaa--gaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtg 150  Q
    |||||| |||||||||||||| |||||||  ||||| |||||||||||||||||||||||| | ||||||||||||||||||||  |||||| ||||| |    
T  29668015 gtaacaattgaaaattgtaacgaaatcaaaagaaaaatgttactaattaaatttagtaacatttgaacaattgttaggtaaagcttgtgttattaaagag 29667916  T
Q  151 ttttagttacattt 164  Q
     |||||| ||||||    
T  29667915 atttagtaacattt 29667902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 48 - 164
Target Start/End: Complemental strand, 9631258 - 9631142
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    ||||||||||| ||||||| | | ||||||||||||| |  |||||||| |||||||||||||| | |||||||||||||| | ||||| |||||||| |    
T  9631258 atttagtaacacttgaaaactattactaaatcaagaagaacgttactaagtaaatttagtaacatttgaacaattgttaggcatagcccctgttactata 9631159  T
Q  148 gtgttttagttacattt 164  Q
    | |||||||||||||||    
T  9631158 gagttttagttacattt 9631142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 51 - 258
Target Start/End: Complemental strand, 23904452 - 23904243
Alignment:
Q  51 tagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtg 150  Q
    |||||||| ||||||||||  ||||||| |||||||  |||||||| | |||||||||||| | |||||||||||||||||||||| | |||| |||| |    
T  23904452 tagtaacacttgaaaattgctactaaatgaagaaaaaagttactaaatcaatttagtaacatttgaacaattgttaggtaaagcccctcttacaaaagag 23904353  T
Q  151 ttttagttacatttcatagaactatc-ggtaacaatcaaaaagtgtcgcaa-atat-taccttattgtaacactttttgtatcatttgtaacaataaaaa 247  Q
     |||| ||||| || |||| | ||||   ||||| |||||||||||| ||| || |  || |||||||||||||||||||||||   || ||||||| ||    
T  23904352 gttta-ttacactttatagtattatctcttaacattcaaaaagtgtcacaagatgtaaacattattgtaacactttttgtatcaacagtgacaataacaa 23904254  T
Q  248 agtgttacatt 258  Q
    | |||||||||    
T  23904253 aatgttacatt 23904243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 655 - 733
Target Start/End: Original strand, 30821714 - 30821792
Alignment:
Q  655 aatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataaacaatataatgcattcttaagcagtggt 733  Q
    |||||||||||||||||| |  ||| |||||||||||| |||||||||||||||||||||||||| ||| |||||||||    
T  30821714 aatcttctcgcatccttttacggtattcaactttttgtcctgccaaaataaacaatataatgcatgcttcagcagtggt 30821792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 4485665 - 4485559
Alignment:
Q  51 tagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtg 150  Q
    ||||| || ||||||| || |||||||||||| ||| || ||||||||||||||||||| | | ||| ||||||||||||||| |||||||| ||||  |    
T  4485665 tagtatcagttgaaaaatgcaactaaatcaaggaaaatggtactaattaaatttagtaatatttgaataattgttaggtaaagtccgtgttattaaatag 4485566  T
Q  151 ttttagt 157  Q
    |||||||    
T  4485565 ttttagt 4485559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 4485361 - 4485302
Alignment:
Q  452 aatgaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaat 511  Q
    |||| |||||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  4485361 aatgcactatgcaacacgatttcaattacatactaaactgattacaagttttcatccaat 4485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 455 - 510
Target Start/End: Original strand, 12592257 - 12592312
Alignment:
Q  455 gaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaa 510  Q
    ||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  12592257 gaactatgcaacacaatttgaatgacaaactaaaacgattacaagttttcatccaa 12592312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 147
Target Start/End: Complemental strand, 27970019 - 27969921
Alignment:
Q  49 tttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    ||||||||||||||||||||||||| ||| |||||||  |||||||| || ||||||| |||| |  ||||| |||||||||||| |  ||||||||||    
T  27970019 tttagtaacatttgaaaattgtaaccaaagcaagaaatatgttactatttcaatttagcaacatttcaacaaatgttaggtaaagtctatgttactaaa 27969921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 2668556 - 2668457
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    ||||||||||| || ||||||||||||||||||| || || |||||||| ||| || | |||||| | || ||| |||||||||||||||||||||||||    
T  2668556 atttagtaacacttcaaaattgtaactaaatcaaaaacaactgttactatttagatcttgtaacatttga-caaatgttaggtaaagcccgtgttactaa 2668458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 14003870 - 14003969
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    ||||||||||| || ||||||||||||||||||| || || |||||||| ||| || | |||||| | || ||| |||||||||||||||||||||||||    
T  14003870 atttagtaacacttcaaaattgtaactaaatcaaaaacaactgttactatttagatcttgtaacatttga-caaatgttaggtaaagcccgtgttactaa 14003968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 195
Target Start/End: Original strand, 34374808 - 34374971
Alignment:
Q  34 actacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaac--aattgttaggtaa 131  Q
    ||||||| | ||| ||| ||||||| || |||| ||||| ||||||||||||| |||||||||||| |||| |||||| | ||||  |||||||||| ||    
T  34374808 actacaacattgagattaagtaacaattaaaaaatgtaattaaatcaagaaaaatgttactaattatattttgtaacatttgaacaaaattgttaggcaa 34374907  T
Q  132 agcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgt 195  Q
    |  | |||||||||||| |||| ||| | |||| |||| | |||  |||||| ||| |||||||    
T  34374908 aatctgtgttactaaagagtttgagtaatattttatagtattatgagtaacattcataaagtgt 34374971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 2941002 - 2941109
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaat-tgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    |||||| ||||||| ||||||||||| ||||||| ||||  ||||||||||||  |||||||||| | || ||| ||||||||||||   ||||||||||    
T  2941002 atttaggaacatttaaaaattgtaacaaaatcaaaaaaagatgttactaattatgtttagtaacatttgagcaaatgttaggtaaagtttgtgttactaa 2941101  T
Q  147 agtgtttt 154  Q
    | ||||||    
T  2941102 aatgtttt 2941109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 6673721 - 6673659
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaaca 111  Q
    ||||||||||| ||||||| ||||||||||||||||||| |||||||||  |||||||||||||    
T  6673721 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaa-aaaatttagtaaca 6673659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 4591145 - 4591246
Alignment:
Q  46 acatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttacta 145  Q
    ||||||||||||||||||||||| | ||||||||||||||| ||||||  |||||| | | ||||  | | |||||||||||||| || | || ||||||    
T  4591145 acatttagtaacatttgaaaattattactaaatcaagaaaaatgttaccgattaaaatcaataacctttgtacaattgttaggtatagtctgtattacta 4591244  T
Q  146 aa 147  Q
    ||    
T  4591245 aa 4591246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 30481315 - 30481231
Alignment:
Q  64 aaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaag 148  Q
    ||||||| ||||||||||||||| |||| |||||||||| |||||||| | |||||| | |||| |||||  | |||||||||||    
T  30481315 aaattgttactaaatcaagaaaaatgttgctaattaaatctagtaacaattgaacaaattttagataaagatcatgttactaaag 30481231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 453 - 528
Target Start/End: Complemental strand, 8495580 - 8495505
Alignment:
Q  453 atgaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaatgtaacatgtactctata 528  Q
    |||||||||||||||||||||  ||||||||||||||  ||||||| ||||||||  ||  | |||||||||||||    
T  8495580 atgaactatgcaacacaatttccattacatactaaaactattacaaattttcatctcattaagcatgtactctata 8495505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 147
Target Start/End: Complemental strand, 6346966 - 6346862
Alignment:
Q  43 atgacatttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgtt 141  Q
    |||| |||||||||||  | ||||||||||||||||||| || || |||||||| |||||||| |||||| | | | || ||||||||||||||  ||||    
T  6346966 atgagatttagtaacacattaaaattgtaactaaatcaaaaataaatgttactatttaaattttgtaacatttg-ataaatgttaggtaaagcctatgtt 6346868  T
Q  142 actaaa 147  Q
    ||||||    
T  6346867 actaaa 6346862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 459 - 532
Target Start/End: Complemental strand, 28736293 - 28736220
Alignment:
Q  459 tatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaatgtaacatgtactctataaaat 532  Q
    ||||||||| ||||| ||||| |||||||||  ||||||||||| ||||||||| | ||||||||  |||||||    
T  28736293 tatgcaacaaaatttcaattagatactaaaaccattacaagtttccatccaatgaagcatgtactaaataaaat 28736220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 7601437 - 7601338
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    ||||||||||| || |||||||||| |||||||| || || |||||||| ||| || | |||||| | || ||| |||||||||||| ||||||||||||    
T  7601437 atttagtaacacttcaaaattgtaattaaatcaaaaacaactgttactatttagatcttgtaacatttga-caaatgttaggtaaagtccgtgttactaa 7601339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 325 - 369
Target Start/End: Original strand, 10264033 - 10264077
Alignment:
Q  325 caaatttgtctttgcttagacttcattcatatttgaattaaccaa 369  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||    
T  10264033 caaatttgtctttgcttagacttcaataatatttcaattaaccaa 10264077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 10935860 - 10935800
Alignment:
Q  72 actaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaa 132  Q
    ||||||||| ||||| |||||||||||| ||  ||||||| | ||||||||||||||||||    
T  10935860 actaaatcatgaaaaatgttactaattatatccagtaacatttgaacaattgttaggtaaa 10935800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 6673329 - 6673271
Alignment:
Q  452 aatgaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaat 511  Q
    |||||||| ||||||||||| | |||||||||||||||  ||||||| ||||||||||||    
T  6673329 aatgaactgtgcaacacaatat-aattacatactaaaacaattacaaattttcatccaat 6673271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 498
Target Start/End: Original strand, 15362148 - 15362183
Alignment:
Q  463 caacacaatttgaattacatactaaaatgattacaa 498  Q
    |||||||||||||||||||||| |||||||||||||    
T  15362148 caacacaatttgaattacatacaaaaatgattacaa 15362183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 498
Target Start/End: Original strand, 16735238 - 16735273
Alignment:
Q  463 caacacaatttgaattacatactaaaatgattacaa 498  Q
    |||||||||||||||||||||| |||||||||||||    
T  16735238 caacacaatttgaattacatacaaaaatgattacaa 16735273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 147
Target Start/End: Original strand, 9236021 - 9236126
Alignment:
Q  43 atgacatttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggt-aaagcccgtgt 140  Q
    |||| ||||||||||| || ||||| ||||||||||||| || || | |||||| |||||||| |||||| | | |||| |||||||| ||| |||||||    
T  9236021 atgagatttagtaacacttcaaaatcgtaactaaatcaaaaacaaatattactatttaaattttgtaacatttg-acaaatgttaggtaaaaacccgtgt 9236119  T
Q  141 tactaaa 147  Q
    |||||||    
T  9236120 tactaaa 9236126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 58
Target Start/End: Original strand, 14666535 - 14666564
Alignment:
Q  29 acactactacaataatgacatttagtaaca 58  Q
    ||||||||||||||||||||||||||||||    
T  14666535 acactactacaataatgacatttagtaaca 14666564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 353; Significance: 0; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 30 - 719
Target Start/End: Original strand, 19448427 - 19449134
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||| |    
T  19448427 cactactacaataatgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattttgcaacactcgaacaattgttagat 19448526  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    |||| |||||||||||||| |||||||||| |||| |||| | |||| |||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  19448527 aaagtccgtgttactaaagagttttagttatattttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtat 19448626  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||           |||| |||||||    
T  19448627 cactagtaacaataaaaaagtgttacatttataatttttgagaagttgtaaaaagtgtcgcaaaattgtctagacta--aatttttttgaatctaccaaa 19448724  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataatttcccccttca 428  Q
    ||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  19448725 tttgtcttcacttaaacttcattcatatttgaattaaccaatattagatacaagttttaataacaagtttgaattacatactctacaattt-ccccttca 19448823  T
Q  429 ttgttcttattcttgcat------------------aacataat--gaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatcc 508  Q
     |||||||||||||||||                  |||| |||  ||||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  19448824 ctgttcttattcttgcataatgaaaatgaaatatgcaacacaattagaactatgcaacaaaatttgaatgtcatactaaaatgattacaagttttcatcc 19448923  T
Q  509 aatgtaacatgtactctataaaatatcccactgcactattattattcttccaaccatattatcagccttccattttcttttct--ttgattc-ttttgct 605  Q
    ||| ||||||||||||||||||||||| ||||||| | ||  ||||| |||||| ||||||||||||||||||||| | || |  ||||||| ||||| |    
T  19448924 aatataacatgtactctataaaatatctcactgcattgttcctattcatccaactatattatcagccttccattttgtattatgcttgattctttttgtt 19449023  T
Q  606 ccaagttgttgacactctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataa 705  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||| |   || |||||||||||| ||||||||||||    
T  19449024 ccaacttgttgacactctacaaatttattttccttctctttcttcatcaaatctt---gcatccttttacaatattcaactttttgtcctgccaaaataa 19449120  T
Q  706 acaatataatgcat 719  Q
    ||||||||||||||    
T  19449121 acaatataatgcat 19449134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 30 - 719
Target Start/End: Complemental strand, 19532649 - 19531942
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||| |    
T  19532649 cactactacaataatgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattttgcaacactcgaacaattgttagat 19532550  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    |||| |||||||||||||| |||||||||| |||| |||| | |||| |||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  19532549 aaagtccgtgttactaaagagttttagttatattttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtat 19532450  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||           |||| |||||||    
T  19532449 cactagtaacaataaaaaagtgttacatttataatttttgagaagttgtaaaaagtgtcgcaaaattgtctagacta--aatttttttgaatctaccaaa 19532352  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataatttcccccttca 428  Q
    ||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  19532351 tttgtcttcacttaaacttcattcatatttgaattaaccaatattagatacaagttttaataacaagtttgaattacatactctacaattt-ccccttca 19532253  T
Q  429 ttgttcttattcttgcat------------------aacataat--gaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatcc 508  Q
     |||||||||||||||||                  |||| |||  ||||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  19532252 ctgttcttattcttgcataatgaaaatgaaatatgcaacacaattagaactatgcaacaaaatttgaatgtcatactaaaatgattacaagttttcatcc 19532153  T
Q  509 aatgtaacatgtactctataaaatatcccactgcactattattattcttccaaccatattatcagccttccattttcttttct--ttgattc-ttttgct 605  Q
    ||| ||||||||||||||||||||||| ||||||| | ||  ||||| |||||| ||||||||||||||||||||| | || |  ||||||| ||||| |    
T  19532152 aatataacatgtactctataaaatatctcactgcattgttcctattcatccaactatattatcagccttccattttgtattatgcttgattctttttgtt 19532053  T
Q  606 ccaagttgttgacactctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataa 705  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||| |   || |||||||||||| ||||||||||||    
T  19532052 ccaacttgttgacactctacaaatttattttccttctctttcttcatcaaatctt---gcatccttttacaatattcaactttttgtcctgccaaaataa 19531956  T
Q  706 acaatataatgcat 719  Q
    ||||||||||||||    
T  19531955 acaatataatgcat 19531942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 30 - 479
Target Start/End: Complemental strand, 28249196 - 28248750
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  28249196 cactactacaataatggcacttagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggt 28249097  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    ||||||||||||||||||||||||||||||||||| |||| |||    |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  28249096 aaagcccgtgttactaaagtgttttagttacattttatagtact----gtaacaatcaaaaagtgtcgcaaatggtaccttattgtaacactttttgtat 28249001  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||            |||||||||||    
T  28249000 cacttgtaacaataaaaaagtgttacatttataatttttgaggagttgtaaaaagtgtcgcaaaattgtctaaactaattttttt----aatttaccaaa 28248905  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataa---tttccccct 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||| ||    
T  28248904 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataaaagttcccctct 28248805  T
Q  426 tcattgttcttattcttgcataac-ataatgaactatgcaacacaatttgaatta 479  Q
    || |||||||||||||||||| || | ||| ||||||||||||||||||||||||    
T  28248804 tctttgttcttattcttgcattacgaaaataaactatgcaacacaatttgaatta 28248750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 30 - 472
Target Start/End: Complemental strand, 19370031 - 19369589
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||| |    
T  19370031 cactactacaataatgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattttgcaacactcgaacaattgttagat 19369932  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    |||| |||||||||||||| ||||||||||||||| |||| | |||| |||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  19369931 aaagtccgtgttactaaagagttttagttacattttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtat 19369832  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||           |||| |||||||    
T  19369831 cactagtaacaataaaaaagtgttacatttataatttttgagaagttgtaaaaagtgtcgcaaaattgtctagacta--aatttttttgaatctaccaaa 19369734  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataatttcccccttca 428  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  19369733 tttgtctttgcttaaacttcattcatatttgaattaactaatattagatacaagttttaataacaagtttgaattacatactctacaatttcccccttca 19369634  T
Q  429 ttgttcttattcttgcataa-cataatgaactatgcaacacaatt 472  Q
    ||||||||||||||||||||  | |||||||||||||||||||||    
T  19369633 ttgttcttattcttgcataatgaaaatgaactatgcaacacaatt 19369589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 29 - 476
Target Start/End: Original strand, 25638785 - 25639234
Alignment:
Q  29 acactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttagg 128  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||    
T  25638785 acactactacaataatggcaattagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttagg 25638884  T
Q  129 taaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgta 228  Q
    |||| ||| ||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  25638885 taaaacccatgttactaaagtgttttagttacattttatagtactatccgtaacaatcaaaaaatgtcgcaaatggtaccttattgtaacactttttgta 25638984  T
Q  229 tcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaa 327  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||            ||||||||||    
T  25638985 tcacttgtaacaataaaaaagtgttacatttataatttttgaggagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt---aatttaccaa 25639081  T
Q  328 atttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataa---tttccccc 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   || ||| |    
T  25639082 atttgtctttgcttagacttcattcatatttgaattaaccaatattagacacaagttttaataactagtttgaattacatactctataaaagttcccctc 25639181  T
Q  425 ttcattgttcttattcttgcataac-ataatgaactatgcaacacaatttgaa 476  Q
    |||  ||||||||||||||||| || | ||| |||||||||||||||||||||    
T  25639182 ttctctgttcttattcttgcatgacgaaaataaactatgcaacacaatttgaa 25639234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 30 - 473
Target Start/End: Complemental strand, 45356233 - 45355788
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||| || || |||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  45356233 cactactacaataatggcaattggtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggt 45356134  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  45356133 aaagcccgtgttactaaagtgttttagttacattttatagtactatctgtaacaatcaaaaagtgtcgcaaatggtaccttattgtaacactttttgtat 45356034  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||  ||||||            ||||||| |||    
T  45356033 cacttgtaacaataaaaaagtgttacatttataatttttgaggagttgtaaaaagtgtcgcaaaattgtataaactaatttttttt---aatttactaaa 45355937  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataa---tttccccct 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||| ||    
T  45355936 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataaaagttcccctct 45355837  T
Q  426 tcattgttcttattcttgcataac-ataatgaactatgcaacacaattt 473  Q
    ||  ||||||||||||||||| || | ||| ||||||||||||||||||    
T  45355836 tctctgttcttattcttgcatgacgaaaataaactatgcaacacaattt 45355788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 29 - 610
Target Start/End: Original strand, 5528721 - 5529310
Alignment:
Q  29 acactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttagg 128  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||     
T  5528721 acactactacaataatgacatttagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacactcaaacaattgttaga 5528820  T
Q  129 taaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgta 228  Q
    ||||| | |||||||||||| ||||||||||||||| | || | |||| |||||| | |||||||||||||||||| || ||||||||||||||||||||    
T  5528821 taaagtctgtgttactaaagagttttagttacattttacagtattatctgtaacagttaaaaagtgtcgcaaatataacattattgtaacactttttgta 5528920  T
Q  229 tcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaa 327  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| | ||||           |||| || |||    
T  5528921 tcattagtaacaataaaaaagtgttacaattataatttttgagaagttgtaaaaagtgtcgcaaaattgtctagacta--aatttttttgaatctatcaa 5529018  T
Q  328 atttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataattt-ccccctt 426  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||             ||||| |||||||||||||| ||||| |||||||    
T  5529019 atttgtctttgattagacttcattcatatttgaattaaccaatattagataca-------------agtttaaattacatactctaaaatttcccccctt 5529105  T
Q  427 cattgttcttattcttgcataac-ataatgaactatgca-------------------acacaatttgaattacatactaaaatgattacaagttttcat 506  Q
    || | |||||||| ||||||||| | |||||| ||||||                   ||||||||||||| | |||| |||||||||||||||||||||    
T  5529106 cactattcttattattgcataacgaaaatgaattatgcaacacaattagaactatgcaacacaatttgaatgaaataccaaaatgattacaagttttcat 5529205  T
Q  507 ccaatgtaacatgtactctataaaatatcccactgcactattattattcttccaaccatattatcagccttccattttcttttct--ttgattcttttgc 604  Q
    || ||||||||||||||||||||||||| |||||||| | || |||||| |||||||||||||||||||||||||||| ||||||  |||||  ||||||    
T  5529206 cc-atgtaacatgtactctataaaatattccactgcattgttcttattcatccaaccatattatcagccttccattttgttttctacttgatctttttgc 5529304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 29 - 408
Target Start/End: Original strand, 25637622 - 25637999
Alignment:
Q  29 acactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttagg 128  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  25637622 acactactacaataatgacatttagtaacacttgaaaattgtaactaaattaagaaaactgttactaattaaatttagcaacactcgaacaattgttagg 25637721  T
Q  129 taaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgta 228  Q
    ||||||||||||||||||||  |||||||||||||| |||| | |||  |||||||| ||||||||| ||||||  ||| ||||||||||||||||||||    
T  25637722 taaagcccgtgttactaaagaattttagttacattttatagtattat-tgtaacaattaaaaagtgttgcaaatgctacattattgtaacactttttgta 25637820  T
Q  229 tcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaa 327  Q
    ||| | |||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||           |||| ||| ||    
T  25637821 tcactagtaacaatactaaagtgttacatttataatttttgagaagttgtaaaaagtgtcgcaaaattgtctagacta--aaattttttgaatctacaaa 25637918  T
Q  328 atttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacata 408  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25637919 atttgtctttacatagacttcattcatatttgaattaaccaatattagatacaagttttaataacaagtttgaattacata 25637999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 29 - 295
Target Start/End: Complemental strand, 17634593 - 17634326
Alignment:
Q  29 acactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttagg 128  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||| ||||    
T  17634593 acactcctacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttaataacacttgaacaattgatagg 17634494  T
Q  129 taaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgta 228  Q
    ||||||||||||||||||||   ||||||||||||| |||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  17634493 taaagcccgtgttactaaagaaatttagttacattttatagtactatctgtaacaatcaaaaagtgtcgcaaatattacattattgtaacactttatgta 17634394  T
Q  229 tcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaatt 295  Q
    |||    |||||||||| || |||| ||||||| |||||||||||||||| |||||||| ||||||||    
T  17634393 tcaccaataacaataaataaatgttgcatttatcatttttgagaagttgtaaaaagtgttgcaaaatt 17634326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 30 - 407
Target Start/End: Original strand, 18766896 - 18767273
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| | ||| ||||||||||| | ||||||| ||||||||||||||    
T  18766896 cactactacaataatgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatattattaattaaattttgcaacactcaaacaattgttaggt 18766995  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    ||||  ||||||||||||| ||||||||||||||| |||| | |||    |||||| ||||||||||  |||| |||| ||||||||||| |||||||||    
T  18766996 aaagtacgtgttactaaagagttttagttacattttatagtattatatagaacaattaaaaagtgtcataaatgttacattattgtaacattttttgtat 18767095  T
Q  230 catttgtaacaat-aaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaa 327  Q
    || | |||||||| |||||||||||||||||||||||||||||||||||| |||||| | ||||||||||| | || |            ||| ||||||    
T  18767096 cactagtaacaataaaaaaagtgttacatttataatttttgagaagttgtaaaaagtattgcaaaattgtctagacaaattttttttc--aatctaccaa 18767193  T
Q  328 atttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacat 407  Q
    ||||||||| ||||| |||||||||||||||||||||||  |||||| ||||||||||||||||| ||||||||||||||    
T  18767194 atttgtcttcgcttaaacttcattcatatttgaattaacttatattaaatacaagttttaataacaagtttgaattacat 18767273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 455 - 719
Target Start/End: Original strand, 18767319 - 18767583
Alignment:
Q  455 gaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaatgtaacatgtactctataaaatatcccactgcactattattatt 554  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||  ||||    
T  18767319 gaactatgcaacactatttgaatgtcatactaaaatgattacaagttttcatccaatgtaacatgtactctataaaatatcccacttcattgttcctatt 18767418  T
Q  555 cttccaaccatattatcagccttccattttcttttct--ttgattc-ttttgctccaagttgttgacactctacaaatttattttccttctctttcttct 651  Q
    | ||||||||||||||||||||| |||||| ||||||  ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  18767419 catccaaccatattatcagcctttcattttgttttctgcttgattctttttgttccaagttgttgacactctacaaatttattttccttctctttcttca 18767518  T
Q  652 tcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataaacaatataatgcat 719  Q
    |||||||||   ||||||||| |  ||| | |||||||||| ||||||||||||||||||||||||||    
T  18767519 tcaaatctt---gcatccttttacagtattgaactttttgtcctgccaaaataaacaatataatgcat 18767583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 157; E-Value: 6e-83
Query Start/End: Original strand, 463 - 719
Target Start/End: Original strand, 27810289 - 27810548
Alignment:
Q  463 caacacaatttgaattacatactaaaatgattacaagttttcatccaatgtaacatgtactctataaaatatcccactgcactattattattcttccaac 562  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||| | || |||||| ||||||    
T  27810289 caacacaatttgaatgacatactaaaacgattacaagttttcatccaatgtaacatgtactctataaaatatcttactgcattgttcttattcatccaac 27810388  T
Q  563 catattatcagccttccattttcttttct--ttgattc-ttttgctccaagttgttgacactctacaaatttattttccttctctttcttcttcaaatct 659  Q
    |||||||||||||||||||||| ||||||  ||||||| |||||||||||||||||||| |||||||||| |||||||||| ||||| |||||| |||||    
T  27810389 catattatcagccttccattttgttttctgcttgattctttttgctccaagttgttgacgctctacaaatatattttccttgtcttttttcttctaatct 27810488  T
Q  660 tctcgcatcctttaatcgtaatcaactttttgttctgccaaaataaacaatataatgcat 719  Q
    | || |||||||| |  ||| |||||||||||| ||||||||||||||||||||||||||    
T  27810489 tttcacatccttttacagtattcaactttttgtcctgccaaaataaacaatataatgcat 27810548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 52 - 377
Target Start/End: Original strand, 29345432 - 29345756
Alignment:
Q  52 agtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa-gtg 150  Q
    ||||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||  | |||||||||||||||||||||| | ||||||||        
T  29345432 agtaacactcgaaaattgtaactaaatcaagaaaaatattactaattaaatttagtaacctttgaacaattgttaggtaaagcccctcttactaaacaaa 29345531  T
Q  151 ttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgc-aaatattaccttattgtaacactttttgtatcatttgtaacaataaaaaag 249  Q
     ||||||||||||| |||| | |||  |||||||||| || |||| || |||| |||| |||||||||||||| ||||||||   ||||  ||||||||     
T  29345532 ctttagttacattttatagtattatttgtaacaatcagaatgtgttgcaaaatgttacattattgtaacacttcttgtatcaccggtaatgataaaaaaa 29345631  T
Q  250 tgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaatttgtctttgcttagacttc 348  Q
    |||  ||| | |||||||||||||||||| |||||||||||||||||||| ||||||           |||| ||| |||||||||| ||||||||||||    
T  29345632 tgt--catatctaatttttgagaagttgtaaaaagtgtcgcaaaattgtctaaacta--aaaaattgtgaatctactaaatttgtctctgcttagacttc 29345727  T
Q  349 attcatatttgaattaaccaatattagat 377  Q
    | |||||||||||||||||||||||||||    
T  29345728 aatcatatttgaattaaccaatattagat 29345756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 43 - 298
Target Start/End: Complemental strand, 6801938 - 6801676
Alignment:
Q  43 atgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgtta 142  Q
    |||| ||||||||||| ||||||| | | |||||||||| |||| |||||||||||||||||||||||| | |||||||||||||||||||||| |||||    
T  6801938 atgagatttagtaacacttgaaaactattactaaatcaataaaaatgttactaattaaatttagtaacagttgaacaattgttaggtaaagcccctgtta 6801839  T
Q  143 ctaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaag-----tgtcgc-aaatattaccttattgtaacactttttgtatcatttgt 236  Q
    |||||| ||||||||||||||| | || | || | |||||| | ||||||     |||||| |||| |||| ||||||||||||||||||||||||  ||    
T  6801838 ctaaagagttttagttacattttagagtattagctgtaacattaaaaaagtgtactgtcgcaaaatgttacattattgtaacactttttgtatcatcagt 6801739  T
Q  237 aacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtc 298  Q
    ||| ||||| || |||||||||||| ||||||| ||| | || |||||||| |||||||||||    
T  6801738 aaccataaagaaatgttacatttatcatttttgcgaattagtaaaaagtgttgcaaaattgtc 6801676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 44 - 300
Target Start/End: Original strand, 14997614 - 14997872
Alignment:
Q  44 tgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttac 143  Q
    |||||| |||| ||| ||||||||| | ||||| ||||||||| |||||||  ||||| ||||||||| | | | |||||||||||||| ||| ||||||    
T  14997614 tgacatctagtgacacttgaaaattattactaattcaagaaaaatgttactggttaaaattagtaacatttgtagaattgttaggtaaaacccatgttac 14997713  T
Q  144 taaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgc-aaatattaccttattgtaacactttttgtatcatttgtaacaat 242  Q
    ||||| | ||||||||| ||| |||| | || | |||||| ||||||| |||||| ||| ||||| |||||||||||||||||||||||   |||||| |    
T  14997714 taaagagctttagttaccttttatagtattaactgtaacattcaaaaaatgtcgcaaaacattacattattgtaacactttttgtatcaccggtaacact 14997813  T
Q  243 aaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtcca 300  Q
    |||||| ||||||||||||||||||||| ||||||| |||||| | |||||||||||||    
T  14997814 aaaaaaatgttacatttataatttttgataagttgtaaaaagttttgcaaaattgtcca 14997872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 89 - 298
Target Start/End: Original strand, 6223439 - 6223651
Alignment:
Q  89 gttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatc-a 187  Q
    |||||| |||||||||||||||| | | | |||||||||||||||| ||||||||||||| |||||||||||| || |||  | |||  |||||| || |    
T  6223439 gttactgattaaatttagtaacatttgtaaaattgttaggtaaagcgcgtgttactaaagagttttagttacactttataatattatatgtaacattcaa 6223538  T
Q  188 aaaagtgtcgc-aaatattaccttattgtaacactttttgtatcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt--aaaagt 284  Q
    ||||||||||| |||| |||| |||||||||||||||||| ||||   |||||| ||||||| |||||||||| ||| |||||||||||| |  ||||||    
T  6223539 aaaagtgtcgcaaaatgttacattattgtaacactttttgaatcaccagtaacactaaaaaaatgttacattt-taaattttgagaagttataaaaaagt 6223637  T
Q  285 gtcgcaaaattgtc 298  Q
    ||||||||||||||    
T  6223638 gtcgcaaaattgtc 6223651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 52 - 372
Target Start/End: Complemental strand, 5651044 - 5650725
Alignment:
Q  52 agtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtgt 151  Q
    ||||||| ||||||| | | ||||||||||||||| ||||||||||| ||||||| |||| | |||||||||||||||||| ||| |||||| |||  |     
T  5651044 agtaacacttgaaaactattactaaatcaagaaaaatgttactaattcaatttagcaacatttgaacaattgttaggtaaaacccttgttacaaaaaagc 5650945  T
Q  152 tttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgc-aaatattaccttattgtaacactttttgtatcatttgtaacaat--aaaaaa 248  Q
    ||||||| ||||| || | | ||||  ||||| ||||| |||||| | |||| |||| |||||||||||||||||||||||   |||| |||  ||||||    
T  5650944 tttagttgcattttatggtattatctataacattcaaatagtgtcacaaaatgttacattattgtaacactttttgtatca-cggtaataataaaaaaaa 5650846  T
Q  249 gtgttacatttataatttttgagaagttgtaa-aagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaatttgtctttgcttagactt 347  Q
       ||||||| || |||||||||||||||||| |||||||||||||| ||    ||||            ||||||||  ||||||| ||||||||| ||    
T  5650845 aaattacattcatcatttttgagaagttgtaataagtgtcgcaaaatcgtttggactaaaattgtt----aatttacccgatttgtcattgcttagattt 5650750  T
Q  348 cattcatatttgaattaaccaatat 372  Q
    |||||||||||||||||||||||||    
T  5650749 cattcatatttgaattaaccaatat 5650725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 27810162 - 27810253
Alignment:
Q  317 gaatttaccaaatttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacata 408  Q
    |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  27810162 gaatctacaaaatttgtctttgtttagacttcattcatatttgaattaaccaattttagatacaagttttaataacaagtttgaattacata 27810253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 187 - 372
Target Start/End: Original strand, 12105496 - 12105680
Alignment:
Q  187 aaaaagtgtcgcaaatattaccttattgtaacactttttgtatcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtg 285  Q
    ||||||||||||||||  ||| |||||  ||||||||||||||||   ||||||| |||||| ||||||||| || |||||| ||||||||| |||||||    
T  12105496 aaaaagtgtcgcaaatggtacgttattaaaacactttttgtatcaccggtaacaagaaaaaaatgttacattcatcattttttagaagttgtaaaaagtg 12105595  T
Q  286 tcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaatttgtctttgcttagacttcattcatatttgaattaaccaatat 372  Q
    ||||||||||||| |||| |           |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  12105596 tcgcaaaattgtctaaacca--aaaaattgtgaatctaccaaatttgtttttgcttagatttcattcatatttgaattaaccaatat 12105680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 455 - 571
Target Start/End: Original strand, 25638027 - 25638143
Alignment:
Q  455 gaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaatgtaacatgtactctataaaatatcccactgcactattattatt 554  Q
    |||||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||| || | |  |||||    
T  25638027 gaactacgcaacacaatttgaatgacatactaaaacgattacaaattttcatccaatgtaacatgtattctataaaatatcctactacattgtacttatt 25638126  T
Q  555 cttccaaccatattatc 571  Q
    | |||||||||||||||    
T  25638127 catccaaccatattatc 25638143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 48 - 292
Target Start/End: Original strand, 6403590 - 6403833
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    ||||||||||| |||||| |||||||||||| ||||||| |||||||||||||||||||||||| | || ||||||||||||||||||||||||| ||||    
T  6403590 atttagtaacaattgaaatttgtaactaaattaagaaaaatgttactaattaaatttagtaacatttgagcaattgttaggtaaagcccgtgttattaaa 6403689  T
Q  148 gtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtatcatttgtaacaataaaaa 247  Q
      | || ||| |||||| |||  |  || | ||||| | ||||| ||| ||| || |||  || |||||||| ||||||||| |   |||||| ||||||    
T  6403690 aagcttcagtaacattttatatcataattg-taacagtaaaaaaatgttgcatat-ttatatt-ttgtaacattttttgtatgaccagtaacactaaaaa 6403786  T
Q  248 agtgttacatttataatttttgagaagttgt--aaaagtgtcgcaaa 292  Q
    | ||| ||||||||| ||||||| |||||||  ||||||||||||||    
T  6403787 aatgtcacatttatattttttgaaaagttgtaaaaaagtgtcgcaaa 6403833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 29553626 - 29553725
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||| |||| | || |||||||||| |||||| ||||||||||||    
T  29553626 atttagtaacaattgaaaattgtaaccaaatcaagaaaaatgttactaattaaatttagcaacatttgagcaattgttagttaaagcgcgtgttactaaa 29553725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 31347346 - 31347444
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    ||||||||||| |||||||||||||| |||||||||||| || ||||||||||||||||||||| | || |||||||||| |||| || ||||||||||    
T  31347346 atttagtaacaattgaaaattgtaaccaaatcaagaaaaatgctactaattaaatttagtaacatttgatcaattgttagataaatcctgtgttactaa 31347444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 452 - 517
Target Start/End: Original strand, 29345828 - 29345893
Alignment:
Q  452 aatgaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaatgtaaca 517  Q
    |||||||||||||||||||  ||||||||||| ||||||||||| |||||||||||||||||||||    
T  29345828 aatgaactatgcaacacaaagtgaattacatattaaaatgattaaaagttttcatccaatgtaaca 29345893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 5000679 - 5000776
Alignment:
Q  51 tagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaag 148  Q
    |||| ||| ||||||||||| |||| ||||  ||||||||||||||||||||||||||||| | || |||| ||||||| || || ||||||||||||    
T  5000679 tagttacaattgaaaattgttactacatcatcaaaattgttactaattaaatttagtaacatttgagcaatagttaggtgaaacctgtgttactaaag 5000776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 48 - 169
Target Start/End: Complemental strand, 31369209 - 31369088
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    ||||| ||||||||||||| || |||||||||| || || ||||||||||||| |||||| ||| |  ||||| ||||| |||||||   ||||||||||    
T  31369209 atttaataacatttgaaaaatgaaactaaatcacgataaatgttactaattaagtttagtgacatttaaacaaatgttatgtaaagcttatgttactaaa 31369110  T
Q  148 gtgttttagttacatttcatag 169  Q
    | |||| |||||||||| ||||    
T  31369109 gagtttcagttacattttatag 31369088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 45355786 - 45355744
Alignment:
Q  456 aactatgcaacacaatttgaattacatactaaaatgattacaa 498  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  45355786 aactatacaacacaatttgaattacatacaaaaatgattacaa 45355744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 147
Target Start/End: Complemental strand, 19371377 - 19371273
Alignment:
Q  43 atgacatttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgtt 141  Q
    |||| ||||||||||| || ||||||||||||||||||| || || |||||||| ||| || | |||||| | | |||| |||||||||||| | |||||    
T  19371377 atgagatttagtaacaattcaaaattgtaactaaatcaaaaataaatgttactatttagatcttgtaacatttg-acaaatgttaggtaaagactgtgtt 19371279  T
Q  142 actaaa 147  Q
    ||||||    
T  19371278 actaaa 19371273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 19341524 - 19341425
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    ||||||||||| || ||||||||||||||||||| || || |||||||| ||| || | | |||| | | |||| |||||||||||| ||||||||||||    
T  19341524 atttagtaacaattcaaaattgtaactaaatcaaaaataaatgttactatttagatcttgaaacatttg-acaaatgttaggtaaagaccgtgttactaa 19341426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 455 - 502
Target Start/End: Complemental strand, 5650637 - 5650590
Alignment:
Q  455 gaactatgcaacacaatttgaattacatactaaaatgattacaagttt 502  Q
    |||||||||||||||| || |||||||||||||||| |||||| ||||    
T  5650637 gaactatgcaacacaacttcaattacatactaaaattattacatgttt 5650590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 7292827 - 7292885
Alignment:
Q  44 tgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatt 103  Q
    ||||||||| ||||| ||||||||||| ||| ||||| ||||| ||||||||||||||||    
T  7292827 tgacatttaataacacttgaaaattgttactgaatcatgaaaa-tgttactaattaaatt 7292885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 498
Target Start/End: Original strand, 25639240 - 25639275
Alignment:
Q  463 caacacaatttgaattacatactaaaatgattacaa 498  Q
    |||||||||||||||||||||| |||||||||||||    
T  25639240 caacacaatttgaattacatacaaaaatgattacaa 25639275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 30 - 719
Target Start/End: Complemental strand, 40819 - 40111
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |    
T  40819 cactactacaataatgacatttagcaatacttgaaaattgtaactaaatcaagaaaattgttactaattaaattttgcaacactcgaacaattgttagat 40720  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    |||| || ||||||||||| ||||||||||||||| |||| | |||| |||||||| |||||||||| ||||| |||| |||| ||||||||||||||||    
T  40719 aaagtccatgttactaaagagttttagttacattttatagtattatctgtaacaattaaaaagtgtctcaaatgttacattatcgtaacactttttgtat 40620  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || | |||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||| | | ||           |||| |||||||    
T  40619 cactagtaacaatgaaaaagttttacatttataatttttgagaagttgtaaaaagtgtcccaaaattgtctagatta--aatttttttgaatctaccaaa 40522  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataatttcccccttca 428  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  40521 tttgtcttcgcttaaacttcattcatatttgaattaaccaatattagatacaagttttagtaacaagtttgaattacatactctagaatttcccccttca 40422  T
Q  429 ttgttcttattcttgcat------------------aacataat--gaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatcc 508  Q
     |||||| ||||||||||                  |||| |||  ||||||||||||| |||||||||  ||||||| || ||||||||||||||||||    
T  40421 ctgttctaattcttgcataatgaaaatgaaatatgcaacacaattagaactatgcaacaaaatttgaatgtcatactagaaggattacaagttttcatcc 40322  T
Q  509 aatgtaacatgtactctataaaatatcccactgcactattattattcttccaaccatattatcagccttccattttcttttct--ttgattc-ttttgct 605  Q
    ||||||||||||||||||||||||||||||||||| | ||  ||||| |||||||||||||||||||||||||||| ||||||  ||||||| ||||| |    
T  40321 aatgtaacatgtactctataaaatatcccactgcattgttcctattcatccaaccatattatcagccttccattttgttttctgcttgattctttttgtt 40222  T
Q  606 ccaagttgttgacactctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataa 705  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||| |   || |||||||||||| ||||||||||||    
T  40221 ccaagttgttgacactctacaaatttattttccttctctttcttcatcaaatctt---gcatccttttacaatattcaactttttgtcctgccaaaataa 40125  T
Q  706 acaatataatgcat 719  Q
    ||||||||||||||    
T  40124 acaatataatgcat 40111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 349; Significance: 0; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 30 - 719
Target Start/End: Complemental strand, 1685073 - 1684371
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||| |    
T  1685073 cactactataataatgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattttgcaacactcgaacaattgttagat 1684974  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    |||| |||||||||||||| |||||||||||| || |||| | |||| |||||||| |||||||||||||||| ||||  ||||||||||||||||||||    
T  1684973 aaagtccgtgttactaaagagttttagttacaatttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacaatattgtaacactttttgtat 1684874  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||           |||| |||||||    
T  1684873 cactagtaacaataaaaaagtgttacatttataatttttgagaagttgtaaaaagtgtcgcaaaattgtctagacta--aatttttttgaatctaccaaa 1684776  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataatttcccccttca 428  Q
    |||||||| ||||| |||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  1684775 tttgtcttcgcttaaacttcattcagatttgaattaaccaatatcagatacaagttttaataacaagtttgaattacatactctacaattttccccttca 1684676  T
Q  429 ttgttcttattcttgcat------------------aacataat--gaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatcc 508  Q
    |   ||||||||||||||                  |||| |||  |||||||||||||||||||||||  |||||||    |||||||||||||||| |    
T  1684675 t--ctcttattcttgcataatgaaaatgaaatatgcaacacaattagaactatgcaacacaatttgaatgtcatacta----gattacaagttttcattc 1684582  T
Q  509 aatgtaacatgtactctataaaatatcccactgcactattattattcttccaaccatattatcagccttccattttcttttct--ttgattc-ttttgct 605  Q
    ||||||||||||||||||||||||||||||||||| | ||  ||||| |||||||||||||||||||||||||||| ||||||  ||||||| ||||| |    
T  1684581 aatgtaacatgtactctataaaatatcccactgcattgttcctattcatccaaccatattatcagccttccattttgttttctgcttgattctttttgtt 1684482  T
Q  606 ccaagttgttgacactctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataa 705  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||| || ||| |||||||||||| ||||||||||||    
T  1684481 ccaagttgttgacactctacaaatttattttccttctctttcttcatcaaatctt---gcatccttttatagtattcaactttttgtcctgccaaaataa 1684385  T
Q  706 acaatataatgcat 719  Q
    ||||||||||||||    
T  1684384 acaatataatgcat 1684371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 30 - 473
Target Start/End: Original strand, 43600246 - 43600691
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||| || || |||||| ||||||||||||||||||||||||||| ||||||||||||||||||| || ||| |||||||||||||||    
T  43600246 cactactacaataatggcaattggtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaaaacttgaacaattgttaggt 43600345  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  43600346 aaagcccgtgttactaaagtgttttagttacattttatagtactatctgtaacaatcaaaaagtgtcgcaaatggtaccttattgtaacactttttgtat 43600445  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||            ||||||| |||    
T  43600446 cacttgtaacaataaaaaagtgttacatttataatttttgaggagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt---aatttactaaa 43600542  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataa---tttccccct 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||| ||    
T  43600543 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataaaagttcccctct 43600642  T
Q  426 tcattgttcttattcttgcataac-ataatgaactatgcaacacaattt 473  Q
    ||  ||||||||||||||||| || | ||| ||||||||||||||||||    
T  43600643 tctctgttcttattcttgcatgacgaaaataaactatgcaacacaattt 43600691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 30 - 529
Target Start/End: Complemental strand, 47066155 - 47065662
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||  |||||||||||||||    
T  47066155 cactactacaataatgacatttagtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagtaacacctgaacaattgttaggt 47066056  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    |||||||||||||| |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  47066055 aaagcccgtgttaccaaagagttttagttacattttatagtactatccgtaacaatcaaaaagtgtcgcaaatgttacactattgtaacactttttgtat 47065956  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
     | | ||||||||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||||||  | ||||            ||| ||| |||    
T  47065955 aactagtaacaataaaaaagtgttacatttataaattttaagaagttgtaaaaagtgtggcaaaattgtttagactataattttttt--aatctacaaaa 47065858  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctat--aatttccccctt 426  Q
     || ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| | |||||||||||||||||||  |||||||||       
T  47065857 attttctttgcttagacttcattcatatttgaattaac--atattagagacaagttttaataaccaatttgaattacatactctataaaatttcccc--- 47065763  T
Q  427 cattgttcttattcttgcataa-cataatgaac-------tatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaatgtaacat 518  Q
       ||       ||||||||||  | |||||||       ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||    
T  47065762 ---tg-------tcttgcataatgaaaatgaactatgcactatgcaacacattttgaattacatactaaaacgattacaagttttcatccaatgtaccat 47065673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 30 - 529
Target Start/End: Original strand, 53300330 - 53300825
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||||||||   ||||||||||||||    
T  53300330 cactactacaataatgacatttagtaacacttgaaaattgtaattaaatcaagaaaaatgttagtaattaaatttagtaacacctaaacaattgttaggt 53300429  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatatt---accttattgtaacactttttg 226  Q
    |||||||||||||| |||| ||||||||||||||| || | |||||| ||||||||||||||||||||||||| ||   ||  |||||||||||||||||    
T  53300430 aaagcccgtgttaccaaagagttttagttacattttatcgtactatccgtaacaatcaaaaagtgtcgcaaatgttacaacactattgtaacactttttg 53300529  T
Q  227 tatcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttacc 325  Q
    ||| | | ||||||||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||||||  | ||||            ||| || |    
T  53300530 tataactagtaacaataaaaaagtgttacatttataaattttaagaagttgtaaaaagtgtggcaaaattgtttagactataattttttt--aatcta-c 53300626  T
Q  326 aaatttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctat--aatttcccc 423  Q
    |||||| |||||||||| |||||||||||||||||||||||  |||||||| |||||||||| |||| | |||||||||||||||||||  |||||||||    
T  53300627 aaatttttctttgcttatacttcattcatatttgaattaac--atattagagacaagttttattaacaaatttgaattacatactctataaaatttcccc 53300724  T
Q  424 cttcattgttcttattcttgcataa-cataatgaac-------tatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaatgtaa 515  Q
          ||       ||||||||||  | |||||||       ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  53300725 ------tg-------tcttgcataatgaaaatgaactatgcactatgcaacacattttgaattacatactaaaacgattacaagttttcatccaatgtaa 53300811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 30 - 298
Target Start/End: Original strand, 1152023 - 1152292
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||| |||||||||||| |    
T  1152023 cactactacaataatgacatttagcaacacttgaaaattgtaactaaattaagaaaaatgttactaattaaattttgcaacactcaaacaattgttagat 1152122  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    |||| |||||||||||||| |||||||||||| || |||  | |||| |||||||| |||||||||| ||||| |||| |||||||||||||||||||||    
T  1152123 aaagtccgtgttactaaagagttttagttacagtttataatattatctgtaacaattaaaaagtgtctcaaatgttacattattgtaacactttttgtat 1152222  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtc 298  Q
    || | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1152223 cactagtaacaataaaaaagtgttacatttataatttttgagaagttgtaaaaagtgtcgcaaaattgtc 1152292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 633 - 815
Target Start/End: Complemental strand, 47065607 - 47065426
Alignment:
Q  633 ttttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataaacaatataatgcattcttaagcagtgg 732  Q
    |||||||| |||||||||||||||||||||| |||||||| || ||| |||||||||||||||||||||| |||||||||||||||| |||| |  ||||    
T  47065607 ttttcctt-tctttcttcttcaaatcttctcacatccttttatagtattcaactttttgttctgccaaaacaaacaatataatgcatgcttatgtggtgg 47065509  T
Q  733 tcacatataaactacaagatagtcacatgtagcagcatggaaacacttgcaatgatatcaacaatcatagagcaatatacaat 815  Q
    |||||||||||||| || ||||||| | |||||| ||| |||| ||||||||||||||||||||||| | ||||| |||||||    
T  47065508 tcacatataaactataacatagtcataggtagcaacatagaaaaacttgcaatgatatcaacaatcacaaagcaacatacaat 47065426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 119 - 373
Target Start/End: Complemental strand, 27739807 - 27739554
Alignment:
Q  119 aattgttaggtaaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaa--tattaccttattgta 216  Q
    |||||||||||||||||| ||||||| ||| | ||||||||||||| |||| | |||| |||| ||||||||||||||| |||  | |||| ||||||||    
T  27739807 aattgttaggtaaagcccatgttactgaagagctttagttacattttatagtattatctgtaagaatcaaaaagtgtcgaaaaacttttacattattgta 27739708  T
Q  217 acactttttgtatcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnn 315  Q
    ||| ||||||||||| |  ||||||||||||| |||||||||||||||||||||| |||||| ||||||||| ||||||| || | ||||              
T  27739707 acattttttgtatcaatactaacaataaaaaaatgttacatttataatttttgaggagttgtaaaaagtgtcacaaaattatctagacta----aaattg 27739612  T
Q  316 ngaatttaccaaatttgtctttgcttagacttcattcatatttgaattaaccaatatt 373  Q
     |||| |||| ||||||||||||||||||||||| ||||| |||||||||||||||||    
T  27739611 tgaatctaccgaatttgtctttgcttagacttcagtcataattgaattaaccaatatt 27739554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 633 - 815
Target Start/End: Original strand, 53300880 - 53301061
Alignment:
Q  633 ttttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataaacaatataatgcattcttaagcagtgg 732  Q
    |||||||| |||||||||||||||||||||| | |||||| || ||| |||||||||||||||||||||| ||||||||||| |||| |||| |  ||||    
T  53300880 ttttcctt-tctttcttcttcaaatcttctcacgtccttttatagtattcaactttttgttctgccaaaacaaacaatataacgcatgcttatgtggtgg 53300978  T
Q  733 tcacatataaactacaagatagtcacatgtagcagcatggaaacacttgcaatgatatcaacaatcatagagcaatatacaat 815  Q
    |||||||||||||| || ||||||||| |||||| ||| |||| ||||||||||||||||||||||| | ||||| |||||||    
T  53300979 tcacatataaactataacatagtcacaggtagcaacatagaaaaacttgcaatgatatcaacaatcacaaagcaacatacaat 53301061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 531 - 719
Target Start/End: Complemental strand, 8143017 - 8142828
Alignment:
Q  531 atatcccactgcactattattattcttccaaccatattatcagccttccattttcttttct--ttgattctttt-gctccaagttgttgacactctacaa 627  Q
    ||||||||||||| | ||  ||||| |||||||||||||||||||||||||||| ||||||  ||||||||||| | ||||| |||||||||||||||||    
T  8143017 atatcccactgcattgttcctattcatccaaccatattatcagccttccattttgttttctgcttgattctttttgttccaacttgttgacactctacaa 8142918  T
Q  628 atttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaac-tttttgttctgccaaaataaacaatataatgcat 719  Q
    ||||||||||||||||||||||| |||||||||   ||||||||| |  ||| ||||| ||||| | ||||||||||||||||||||||||||    
T  8142917 atttattttccttctctttcttcatcaaatctt---gcatccttttacggtattcaacttttttatcctgccaaaataaacaatataatgcat 8142828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 52 - 297
Target Start/End: Complemental strand, 37751088 - 37750847
Alignment:
Q  52 agtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtgt 151  Q
    |||||||| |||||||||| |||||||||| ||||| ||||||||||||| | ||||||| | |  |||||||||| |||||||  |||||||||   |     
T  37751088 agtaacatatgaaaattgtcactaaatcaaaaaaat-gttactaattaaaatcagtaacatttgcgcaattgttagataaagccaatgttactaagaagc 37750990  T
Q  152 tttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtatcatttgtaacaataaaaaagtg 251  Q
    ||||||||||||| |||| | ||||  || || ||||||| |||||||||| |||| |||||||||||||||||||||||   |   || | ||||| |     
T  37750989 tttagttacattttatagtattatctata-cattcaaaaaatgtcgcaaatgttacattattgtaacactttttgtatcaccgg---cactcaaaaaata 37750894  T
Q  252 ttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgt 297  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  37750893 ttacatttataatttttgagaagttgtaaaaagtatcgcaaaattgt 37750847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 52 - 164
Target Start/End: Complemental strand, 4881168 - 4881056
Alignment:
Q  52 agtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtgt 151  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||| | | | | ||||||||||||||| ||||||||||||||||     
T  4881168 agtaacacttgaaaattgttactaaatcaagaaaaatgttactgattaaatttagtaatatttgtataattgttaggtaaagtccgtgttactaaagtgc 4881069  T
Q  152 tttagttacattt 164  Q
    ||||||| |||||    
T  4881068 tttagttgcattt 4881056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 52 - 164
Target Start/End: Complemental strand, 4904239 - 4904127
Alignment:
Q  52 agtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtgt 151  Q
    ||||||| || |||||||| ||||||||| ||||| ||||||| |||||||||||||||| | | |||||||||||||||||| | |||||||||||||     
T  4904239 agtaacacttaaaaattgttactaaatcatgaaaaatgttactgattaaatttagtaacatttgtacaattgttaggtaaagcacttgttactaaagtgc 4904140  T
Q  152 tttagttacattt 164  Q
    |||||||||||||    
T  4904139 tttagttacattt 4904127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 24559098 - 24558963
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    ||||||||||| || |||| ||||||||||||||||||| |||||||||||||||||||||||| | |||| |||||||||||| | | |||||||||||    
T  24559098 atttagtaacaattaaaaaatgtaactaaatcaagaaaaatgttactaattaaatttagtaacatttgaacgattgttaggtaacggctgtgttactaaa 24558999  T
Q  148 gtgttttagttacatttcatagaactatcggtaaca 183  Q
    |  ||||||| | |||| |||| | |||| ||||||    
T  24558998 gaattttagtgatattttatagtattatcagtaaca 24558963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 21539355 - 21539259
Alignment:
Q  67 ttgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacattt 164  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||| |  |||||||||||| | ||| || ||||||||||| | |||||||||||||    
T  21539355 ttgtaactaaatcaaggaaaatgttactgattaaatttagtaacatttaaacaattgttagat-aagtccttgttactaaagagatttagttacattt 21539259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 48464049 - 48464118
Alignment:
Q  60 ttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    ||||||||||| ||||||| || |||| |||||||||||||||||||||||| | |||||||||||||||    
T  48464049 ttgaaaattgttactaaataaataaaaatgttactaattaaatttagtaacatttgaacaattgttaggt 48464118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 26075300 - 26075222
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgtta 126  Q
    ||||||||||| |  |||||||| | || |||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  26075300 atttagtaacaataaaaaattgttattagatcaagaaaattgttactaagtaaattttgtaacattcgaacaattgtta 26075222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 8573265 - 8573166
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    ||||||||||| || ||||||||||||||||||| || || |||||||| ||| || | |||||| | || ||| |||||||||||||||||||||||||    
T  8573265 atttagtaacacttcaaaattgtaactaaatcaaaaacaactgttactatttagatcttgtaacatttga-caaatgttaggtaaagcccgtgttactaa 8573167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 8575384 - 8575285
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    ||||||||||| || ||||||||||||||||||| || || |||||||| ||| || | |||||| | || ||| |||||||||||||||||||||||||    
T  8575384 atttagtaacacttcaaaattgtaactaaatcaaaaacaactgttactatttagatcttgtaacatttga-caaatgttaggtaaagcccgtgttactaa 8575286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 39073968 - 39073909
Alignment:
Q  452 aatgaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaat 511  Q
    |||||||||||||||||||||| ||||||||| || || |||||||||||| ||||||||    
T  39073968 aatgaactatgcaacacaatttcaattacatattagaacgattacaagtttacatccaat 39073909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 26075347 - 26075290
Alignment:
Q  54 taacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaaca 111  Q
    ||||| ||||||||||| |||| ||||||||||| |||||||| ||||||||||||||    
T  26075347 taacaattgaaaattgttactagatcaagaaaatggttactaagtaaatttagtaaca 26075290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 615 - 697
Target Start/End: Complemental strand, 25908697 - 25908615
Alignment:
Q  615 tgacactctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgc 697  Q
    |||| |||||||| ||| | |||||| |||  |||||||||||| ||||||||||||| || ||| ||| |||||||||||||    
T  25908697 tgacgctctacaagtttgtcttccttgtctgccttcttcaaatcctctcgcatccttttatagtattcagctttttgttctgc 25908615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 28461086 - 28461185
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    ||||||||||| || ||||||||||||||||||| || || |||||||| ||| || | |||||| | | |||| ||| |||||||| ||||||||||||    
T  28461086 atttagtaacacttcaaaattgtaactaaatcaaaaacaactgttactatttagatcttgtaacatttg-acaaatgtcaggtaaagtccgtgttactaa 28461184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 54186526 - 54186624
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    ||||||||||| || ||||||||||||||||||| || || |||||||| ||| || | |||||| | | |||| |||||||||||| ||||||||||||    
T  54186526 atttagtaacactttaaaattgtaactaaatcaaaaacaactgttactatttagatcttgtaacatttg-acaaatgttaggtaaag-ccgtgttactaa 54186623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 498
Target Start/End: Original strand, 43600700 - 43600735
Alignment:
Q  463 caacacaatttgaattacatactaaaatgattacaa 498  Q
    |||||||||||||||||||||| |||||||||||||    
T  43600700 caacacaatttgaattacatacaaaaatgattacaa 43600735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 147
Target Start/End: Original strand, 2549252 - 2549356
Alignment:
Q  43 atgacatttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgtt 141  Q
    |||| ||||||||||| ||  ||||||||| |||||||| || || |||||||| |||||| | |||| | | || ||| ||||||||||| ||||||||    
T  2549252 atgagatttagtaacacttctaaattgtaattaaatcaaaaacaaatgttactatttaaatcttgtaatatttga-caaatgttaggtaaaacccgtgtt 2549350  T
Q  142 actaaa 147  Q
    ||||||    
T  2549351 actaaa 2549356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 21317485 - 21317534
Alignment:
Q  98 taaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    |||||||||||||| |  |||||||||||||||||| | |||||||||||    
T  21317485 taaatttagtaacatttcaacaattgttaggtaaaggctgtgttactaaa 21317534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 332; Significance: 0; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 30 - 759
Target Start/End: Complemental strand, 2943333 - 2942584
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    ||||||| |||||||||||||||   ||| |||||| |||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  2943333 cactactgcaataatgacatttat--acacttgaaatttgtaattaaatcaagaaaaatgttactaattaaatttagtaacattcgaacaattgttaggt 2943236  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
     |||||||||||||||||||||||||||||||||| |||| | |||| |||||||| |||||||||||||| | ||||  ||||||||||||||||||||    
T  2943235 taagcccgtgttactaaagtgttttagttacattttatagtattatctgtaacaattaaaaagtgtcgcaa-tgttacactattgtaacactttttgtat 2943137  T
Q  230 catttgtaacaataaaaaa---gtgttacatttataatttttgagaagttgtaaaa-gtgtcgcaaaattgtccaaactannnnnnnnnnngaatttacc 325  Q
    || | ||||||||||||||   ||||||||||||  |||||||| ||||||||||| |||||||||||||||| | ||||           |||| ||||    
T  2943136 cactggtaacaataaaaaaaaagtgttacatttactatttttgataagttgtaaaaagtgtcgcaaaattgtctagactaaattttttt--gaatctacc 2943039  T
Q  326 aaatttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataatttccccct 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  2943038 aaatttgtctttgcttagacttcattcatatttgaattaaccaatattaaatacaagtttta-taataagtttgaattacatactctataatttccccct 2942940  T
Q  426 t-cattgttcttattcttgcataa------------------cataat--gaactatgcaacacaatttgaattacatactaaaatgattacaagttttc 504  Q
    | || || ||||||||||||||||                  || |||  ||||||||||||||||||| ||| ||||||||||| |||||||||||  |    
T  2942939 ttcactgatcttattcttgcataatgaaaatgaattatgcaacacaattagaactatgcaacacaatttaaatgacatactaaaacgattacaagtt--c 2942842  T
Q  505 atccaatgtaacatgtactctataaaatatcccactgcactattattattcttccaaccatattatcagccttccattttcttttct--ttgattctttt 602  Q
    ||||||||||||||||||||||||||||||||||||  | | || |||||| ||||| |||||||||||||||||||||| ||||||  |||||| ||||    
T  2942841 atccaatgtaacatgtactctataaaatatcccactatattgttcttattcatccaatcatattatcagccttccattttgttttctgcttgattatttt 2942742  T
Q  603 -gctccaagttgttgacactctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaa-tcaactttttgttctgccaa 700  Q
     |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| | | ||| |||||||||| | |||||||    
T  2942741 tgctccaagttgttgacgctctacaaatttattttccttgtctttcttcttcaaatcctctcgcatcctttta-cataattcaactttttatcctgccaa 2942643  T
Q  701 aataaacaatataatgcattcttaagcagtggtcacatataaactacaagatagtcaca 759  Q
    |||||||||||||||||||  |||||||||||||||||||||  || ||||||||||||    
T  2942642 aataaacaatataatgcatgtttaagcagtggtcacatataagttataagatagtcaca 2942584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 289; E-Value: 1e-161
Query Start/End: Original strand, 35 - 473
Target Start/End: Original strand, 13845976 - 13846416
Alignment:
Q  35 ctacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagc 134  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  13845976 ctacaataatgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagc 13846075  T
Q  135 ccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtatcattt 234  Q
    |||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||    
T  13846076 ccgtgttactaaagtgttttagttacattttatagtactatctgtaacaatcaaaaagtgtcgcaaatggtaccttattgtaacactttttgtatcactt 13846175  T
Q  235 gtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaatttgt 333  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||            ||||||| ||||||||    
T  13846176 gtaacaataaaaaagtgttacatttataatttttgaggagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt---aatttactaaatttgt 13846272  T
Q  334 ctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataa---tttcccccttcatt 430  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||| ||||  |    
T  13846273 ctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataaaagttcccctcttctct 13846372  T
Q  431 gttcttattcttgcataac-ataatgaactatgcaacacaattt 473  Q
    |||||||||||||||| || | ||| ||||||||||||||||||    
T  13846373 gttcttattcttgcatgacgaaaataaactatgcaacacaattt 13846416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 30 - 476
Target Start/End: Original strand, 1654555 - 1655003
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||    
T  1654555 cactactacaataatggcaattagtaacaattgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaagt 1654654  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    |||||| |||||| ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  1654655 aaagcctgtgttattaaagtgttttagttacattttatagtactatctgtaacaatcaaaaagtgtcgcaaatggtaccttattgtaacattttttgtat 1654754  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||            |||||||||||    
T  1654755 cacttgtaacaataaaaaagtgttacatttataatttttgaggagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt---aatttaccaaa 1654851  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataa---tttccccct 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||| ||    
T  1654852 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataaaagttcccctct 1654951  T
Q  426 tcattgttcttattcttgcataac-ataatgaactatgcaacacaatttgaa 476  Q
    ||  ||||||||||||||||| || | ||| |||||||||||||||||||||    
T  1654952 tctctgttcttattcttgcatgacgaaaataaactatgcaacacaatttgaa 1655003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 30 - 473
Target Start/End: Original strand, 2550145 - 2550590
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||| || || |||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  2550145 cactactacaataatggcaattggtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggt 2550244  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||  |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  2550245 aaagcctgtgttactaaagtgttttagttacattttatagtactatttgtaacaatcaaaaagtgtcgcaaatggtaccttattgtaacactttttgtat 2550344  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||            ||||||| |||    
T  2550345 cacttgtaacaataaaaaagtgttacatttataatttttgaggagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt---aatttactaaa 2550441  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataa---tttccccct 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||| ||    
T  2550442 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataaaagttcccctct 2550541  T
Q  426 tcattgttcttattcttgcataac-ataatgaactatgcaacacaattt 473  Q
    ||  ||||||||||||||||| || | ||| ||||||||||||||||||    
T  2550542 tctctgttcttattcttgcatgacgaaaataaactatgcaacacaattt 2550590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 30 - 476
Target Start/End: Complemental strand, 7407875 - 7407427
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| |||||| |||||||||||||||    
T  7407875 cactactacaataatggcaattagtaacacttgaaaattgtaactaaatcaagaaaaatattactaattaaatttagcaacacttgaacaattgttaggt 7407776  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  7407775 aaagcccgtgttactaaagtgttttagttacattttatagtactatcagtaacaatcaaaaagtgtcgcaaatggtaccttattgtaacactttttgtat 7407676  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || |||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||  ||||||            ||||||| |||    
T  7407675 cacttgtaacaataaaaaagtgttacatttataatttttaaggagttgtaaaaagtgtcgcaaaattgtataaactaatttttttt---aatttacaaaa 7407579  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataa---tttccccct 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||  ||    
T  7407578 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataaaagttcccatct 7407479  T
Q  426 tcattgttcttattcttgcataac-ataatgaactatgcaacacaatttgaa 476  Q
    ||  ||||||||||||||||| || | ||| |||||||||||||||||||||    
T  7407478 tctctgttcttattcttgcatgacgaaaataaactatgcaacacaatttgaa 7407427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 182; E-Value: 7e-98
Query Start/End: Original strand, 39 - 411
Target Start/End: Complemental strand, 1628059 - 1627688
Alignment:
Q  39 aataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgt 138  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||| |||||| ||||    
T  1628059 aataatgacatttagtaacacttgaaaattgtaactaaatcaagaaaaatattactaattaaatttagtaacacttgaacaattgttaagtaaagtccgt 1627960  T
Q  139 gttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattacctta-ttgtaacactttttgtatcatttgta 237  Q
    ||||| |||| ||||||||||||||| |||| | |||  |||||||| |||||||||||||||| |||| ||| |||||| ||||||| ||||| | |||    
T  1627959 gttacaaaagagttttagttacattttatagtattatatgtaacaattaaaaagtgtcgcaaatgttacattatttgtaatactttttatatcactagta 1627860  T
Q  238 acaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaatttgtctt 336  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||            ||| || ||| ||| ||||    
T  1627859 acaataaaaaagtgttacatttataattttttagaagttgtaaaaagtgtcgcaaaattatctaaactaaattttttta--aatctaacaagtttatctt 1627762  T
Q  337 tgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactc 411  Q
    | ||||||||||||||||||||||||||| |||||||| |||||| |||||||||| || |||||||||||||||    
T  1627761 tacttagacttcattcatatttgaattaatcaatattaaatacaaattttaataacaag-ttgaattacatactc 1627688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 48 - 298
Target Start/End: Complemental strand, 9633545 - 9633295
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    ||||||||||| ||||||| | | |||||||| | |||| |||||||||||||||||||| ||| |  ||||||||||||||||||||| ||||||||||    
T  9633545 atttagtaacacttgaaaactattactaaatcgaaaaaaatgttactaattaaatttagttacatttaaacaattgttaggtaaagcccctgttactaaa 9633446  T
Q  148 gtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaa-tattaccttattgtaacactttttgtatcatttgtaacaataaaa 246  Q
    | ||||||||||||||| | || | |||  |||||| ||||||| ||||||||| | || ||| || ||||| ||||||  ||||   |||||| |||||    
T  9633445 gagttttagttacattttagagcattatatgtaacattcaaaaaatgtcgcaaaatgttgcct-atagtaacgcttttttaatcaccagtaacattaaaa 9633347  T
Q  247 aagtgttacatttataatttttgagaagttgtaaaagtgtcgcaaaattgtc 298  Q
    || |||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  9633346 aaatgttgcatttatcatttttgagaagttggaaaagtgtcgcaaaattgtc 9633295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 119 - 298
Target Start/End: Original strand, 28745043 - 28745223
Alignment:
Q  119 aattgttaggtaaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgc-aaatattaccttattgtaa 217  Q
    |||||||||||||||| | ||||||||||| ||||||||||||||| | || | |||  |||||| |||||||||||||| |||| |||| |||||||||    
T  28745043 aattgttaggtaaagcacatgttactaaagagttttagttacattttagagtattatttgtaacattcaaaaagtgtcgcaaaattttacattattgtaa 28745142  T
Q  218 cactttttgtatcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtc 298  Q
    |||||||||||||||  |||||||||||||| |||||||||||| ||||||||||| |||| |||||||| |||||||||||    
T  28745143 cactttttgtatcatcagtaacaataaaaaa-tgttacatttatcatttttgagaatttgtaaaaagtgttgcaaaattgtc 28745223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 52 - 169
Target Start/End: Original strand, 26707860 - 26707977
Alignment:
Q  52 agtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtgt 151  Q
    |||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |  ||||||||||| |     
T  26707860 agtaacatttgaaaatggttactaaatcaagaaaaatgttactaattaaatttagtaacatttgaacaattgttaggtaaagtctctgttactaaagagg 26707959  T
Q  152 tttagttacatttcatag 169  Q
    || ||| |||||||||||    
T  26707960 ttcagtaacatttcatag 26707977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 16457427 - 16457335
Alignment:
Q  55 aacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | || ||||||||||||||||| ||||||||||||    
T  16457427 aacaattgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagtaacatttgagcaattgttaggtaaagctcgtgttactaaa 16457335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 1613316 - 1613217
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||||||| |||||||||||||| | || ||||| ||||||||||||| ||||||||||    
T  1613316 atttagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtaacagttgaccaatttttaggtaaagcccctgttactaaa 1613217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 5498475 - 5498581
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    ||||||||||| || |||| ||||||||||||||||||| |||||||||||||||||||||||    |||||||||||||||||| ||  ||||||||||    
T  5498475 atttagtaacaattaaaaaatgtaactaaatcaagaaaaatgttactaattaaatttagtaacttctgaacaattgttaggtaaaacctatgttactaaa 5498574  T
Q  148 gtgtttt 154  Q
    | |||||    
T  5498575 gagtttt 5498581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 36035301 - 36035407
Alignment:
Q  63 aaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacat 162  Q
    |||||||  ||||||||||||||| |  ||||||||||||||||||||| | | |||||||||||||||||| ||||||||||||| | |||||||||||    
T  36035301 aaaattggtactaaatcaagaaaaataatactaattaaatttagtaacaattgtacaattgttaggtaaagctcgtgttactaaagagctttagttacat 36035400  T
Q  163 ttcatag 169  Q
    || ||||    
T  36035401 tttatag 36035407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 48 - 248
Target Start/End: Complemental strand, 27259548 - 27259356
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    ||||||||||| ||||||| | | ||||||||||| ||| |||||||||||||||||||||||| | ||||||||           ||  ||||||||||    
T  27259548 atttagtaacaattgaaaactattactaaatcaagcaaaatgttactaattaaatttagtaacatttgaacaatttc---------cctttgttactaaa 27259458  T
Q  148 gtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaa-tattaccttattgtaacactttttgtatcatttgtaacaataaaa 246  Q
    | | ||||||||||||| | || | |||| |||||| ||||||||||||| ||| | |||| |||||||||||||||||||||||  ||||| |||||||    
T  27259457 gagctttagttacattttagagtattatctgtaacattcaaaaagtgtcgtaaaatgttacattattgtaacactttttgtatcacctgtaaaaataaaa 27259358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 317 - 376
Target Start/End: Original strand, 2180192 - 2180251
Alignment:
Q  317 gaatttaccaaatttgtctttgcttagacttcattcatatttgaattaaccaatattaga 376  Q
    ||||||||||||||| | |||||||||| ||| |||||||||||||||||||||||||||    
T  2180192 gaatttaccaaatttatgtttgcttagagttcgttcatatttgaattaaccaatattaga 2180251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 23358559 - 23358460
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    ||||||||||| || ||||||||||||||||||| || || |||||||| ||| || | |||||| | || ||| |||||||||||||||||||||||||    
T  23358559 atttagtaacacttcaaaattgtaactaaatcaaaaacaactgttactatttagatcttgtaacatttga-caaatgttaggtaaagcccgtgttactaa 23358461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 23363380 - 23363281
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    ||||||||||| || ||||||||||||||||||| || || |||||||| ||| || | |||||| | || ||| |||||||||||||||||||||||||    
T  23363380 atttagtaacacttcaaaattgtaactaaatcaaaaacaactgttactatttagatcttgtaacatttga-caaatgttaggtaaagcccgtgttactaa 23363282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 156
Target Start/End: Complemental strand, 27713539 - 27713434
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    |||||||||||||| |||| ||||||||| |||| |||   ||||||||||||||||||||||| |  || |||||||||| ||| ||  ||||||||||    
T  27713539 atttagtaacatttaaaaaatgtaactaattcaaaaaa---gttactaattaaatttagtaacatttaaataattgttaggcaaaacctatgttactaaa 27713443  T
Q  148 gtgttttag 156  Q
      |||||||    
T  27713442 tagttttag 27713434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 454 - 498
Target Start/End: Complemental strand, 7395854 - 7395810
Alignment:
Q  454 tgaactatgcaacacaatttgaattacatactaaaatgattacaa 498  Q
    |||||||| |||||||||||||||||||||| |||||||||||||    
T  7395854 tgaactatacaacacaatttgaattacatacaaaaatgattacaa 7395810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 454 - 498
Target Start/End: Complemental strand, 7407430 - 7407386
Alignment:
Q  454 tgaactatgcaacacaatttgaattacatactaaaatgattacaa 498  Q
    |||||||| |||||||||||||||||||||| |||||||||||||    
T  7407430 tgaactatacaacacaatttgaattacatacaaaaatgattacaa 7407386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 9638994 - 9639093
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    ||||||||||| || |||||||||| |||||||| || ||||||||||| ||| || | |||||| | || ||| ||||| |||||||||||||||||||    
T  9638994 atttagtaacacttcaaaattgtaattaaatcaaaaacaattgttactatttagatcttgtaacatttga-caaatgttatgtaaagcccgtgttactaa 9639092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 1613014 - 1612955
Alignment:
Q  452 aatgaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaat 511  Q
    |||||||| ||||||||||||| |||||||||||||||  ||||||| ||| ||||||||    
T  1613014 aatgaactgtgcaacacaattttaattacatactaaaacaattacaaatttccatccaat 1612955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 2180333 - 2180375
Alignment:
Q  463 caacacaatttgaattacatactaaaatgattacaagttttca 505  Q
    ||||||||||| ||||| |||||||||||||||||||||||||    
T  2180333 caacacaatttcaattatatactaaaatgattacaagttttca 2180375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 256
Target Start/End: Original strand, 35082990 - 35083187
Alignment:
Q  65 aattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacattt 164  Q
    |||||| || |||||||||||| ||||| ||| |||||||||||| | | ||||||||||||| |||| ||| |||||  || | | |||||||||| ||    
T  35082990 aattgttacaaaatcaagaaaaatgttagtaaataaatttagtaatatttgaacaattgttagataaaacccttgttagaaatgagctttagttacaatt 35083089  T
Q  165 catagaactatcggtaacaatcaaaaagtgtcgc------aaatattaccttattgtaacactttttgtatcatttgtaacaataaaaaagtgttaca 256  Q
     |||| | ||||  | ||| | |||||||||| |      |||| |||  |||||||||||||||||| |||| | |||||||| || || |||||||    
T  35083090 tatagtattatctctgacatttaaaaagtgtcacaaaacaaaatgttatattattgtaacactttttgcatcactagtaacaatgaagaaatgttaca 35083187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 16457204 - 16457159
Alignment:
Q  324 ccaaatttgtctttgcttagacttcattcatatttgaattaaccaa 369  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  16457204 ccaaatttgtctttgctttcacttcattcatatttaaattaaccaa 16457159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 9633255 - 9633219
Alignment:
Q  340 ttagacttcattcatatttgaattaaccaatattaga 376  Q
    |||||||||||||||||||||||| ||||||||||||    
T  9633255 ttagacttcattcatatttgaattcaccaatattaga 9633219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 28699225 - 28699126
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    ||||| ||||| || ||||||||||||||||||| || || |||||||| ||| || | |||||| | || ||| |||||||||||||| ||||||||||    
T  28699225 atttaataacacttcaaaattgtaactaaatcaaaaacaactgttactatttagatcttgtaacatttga-caaatgttaggtaaagcctgtgttactaa 28699127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 498
Target Start/End: Original strand, 2550599 - 2550634
Alignment:
Q  463 caacacaatttgaattacatactaaaatgattacaa 498  Q
    |||||||||||||||||||||| |||||||||||||    
T  2550599 caacacaatttgaattacatacaaaaatgattacaa 2550634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 498
Target Start/End: Original strand, 13846425 - 13846460
Alignment:
Q  463 caacacaatttgaattacatactaaaatgattacaa 498  Q
    |||||||||||||||||||||| |||||||||||||    
T  13846425 caacacaatttgaattacatacaaaaatgattacaa 13846460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 26735681 - 26735752
Alignment:
Q  98 taaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacatttcatag 169  Q
    |||||||||||||| | ||||||||||||||||||  || ||||||||||| | || | | |||||||||||    
T  26735681 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagcttcaataacatttcatag 26735752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 259
Target Start/End: Original strand, 36035465 - 36035673
Alignment:
Q  44 tgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttac 143  Q
    |||||| |||||||| || |||||||| |||| |||||||||| |  |||| || |||||||||| ||        | ||||||||||||||| |||||     
T  36035465 tgacatctagtaacacttcaaaattgttactatatcaagaaaaataatactgatcaaatttagtatca--------aatgttaggtaaagcccatgttat 36035556  T
Q  144 taaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtc-gcaaatattaccttattgtaacactttttgtatcatttgtaacaat 242  Q
    | ||| ||||||| ||||||| |||| | |||  |||||| | ||||| ||||   |||| |||| |||||||||||  ||||| ||||   |||||| |    
T  36035557 ttaagagttttagctacattttatagtattatatgtaacatttaaaaattgtcataaaatgttacattattgtaacatcttttggatcaccggtaacact 36035656  T
Q  243 aaaaaagtgttacattt 259  Q
    |||||| ||||||||||    
T  36035657 aaaaaaatgttacattt 36035673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 326; Significance: 0; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 30 - 719
Target Start/End: Original strand, 17037522 - 17038235
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  17037522 cactactacaataatgacatttagtaacacttgaaaatcgtaactaaatcaagaaaaatgttactaattaaatttagtaacatttgaacaattgttaggt 17037621  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    |||| | |||||||||||| ||||||||||||||| |||| | |||| |||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  17037622 aaagtcagtgttactaaagagttttagttacattttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtat 17037721  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttg-taaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || | |||||||| ||||||||||||||||||||||||| ||||||||  |||||||||||||||||||  | ||||            ||| |||||||    
T  17037722 cactagtaacaat-aaaaagtgttacatttataatttttaagaagttgacaaaagtgtcgcaaaattgtatagactagatttttttt--aatctaccaaa 17037818  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataattt-cccccttc 427  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||    
T  17037819 tttgtctttacttaaactt-attcatatttgaattaaccaatatttgatacaagttttaataacaagtttcaattacatactctaaaatttccccccttc 17037917  T
Q  428 attgttcttattcttgcat------------------aacataat--gaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatc 507  Q
    | ||||||| |||||||||                  |||| |||  ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  17037918 actgttcttcttcttgcataatgaaaatgaattatgcaacacaattagaactatgcaacacaatttgaatgacatattaaaacgattacaagttttcatc 17038017  T
Q  508 caatgtaacatgtactctataaaatatcccactgcacta---ttattattcttccaaccatattatcagccttccattttcttttct--ttgattc-ttt 601  Q
    |||| ||||||  ||||||||| ||||||||||||| ||   || |||||| ||||||||||||||||| |||||||||| ||||||  ||||||| |||    
T  17038018 caatctaacatagactctataatatatcccactgcattattgttcttattcatccaaccatattatcagacttccattttgttttctgcttgattctttt 17038117  T
Q  602 tgctccaagttgttgacactctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaa 701  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||| |  ||| |||||| ||||  ||||||||    
T  17038118 tgctccaagttgttgacactctacaaatttattttccttgtctttcttcttcaaatcttcttgaatccttttacagtattcaactatttggcctgccaaa 17038217  T
Q  702 ataaacaatataatgcat 719  Q
    ||||||||||||||||||    
T  17038218 ataaacaatataatgcat 17038235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 289; E-Value: 1e-161
Query Start/End: Original strand, 30 - 476
Target Start/End: Complemental strand, 5079185 - 5078737
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  5079185 cactactacaataatgacaattagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggt 5079086  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  5079085 aaagcccgtgttactaaagtgttttagttacattttatagtactatctgtaacaatcaaaaagtgttgcaaatggtaccttattgtaacactttttgtat 5078986  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || ||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||| ||||||            |||||||||||    
T  5078985 cacttgtaacaataaaaaagtgttacatttataa-ttttgaggagttgtaaaaagtgtcgcaaaattgtctaaactaattttttttt--aatttaccaaa 5078889  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataa---tttccccct 425  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    | ||||||    
T  5078888 tttgtctttgcttaaatttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataaaatgtcccccct 5078789  T
Q  426 tcattgttcttattcttgcataac-ataatgaactatgcaacacaatttgaa 476  Q
    ||| |||||||||||||||||||| | ||| |||||||||||||||||||||    
T  5078788 tcactgttcttattcttgcataacaaaaataaactatgcaacacaatttgaa 5078737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 29 - 260
Target Start/End: Original strand, 7410802 - 7411033
Alignment:
Q  29 acactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttagg 128  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||| |||||| ||||||||||||||    
T  7410802 acactactacaataatgacaattagtaacatttcaaaattgtaactaaatcaaaaaaaatgttactaattaaatttagcaacacttgaacaattgttagg 7410901  T
Q  129 taaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgta 228  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||  |||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  7410902 taaagcccgtgttactaaagtgttttagttacattttatagtacaatttgtaacaatcaaaaagtgttgcaaatggtaccttattgtaacactttttgta 7411001  T
Q  229 tcatttgtaacaataaaaaagtgttacattta 260  Q
    ||| ||||||||||||||||||||||||||||    
T  7411002 tcacttgtaacaataaaaaagtgttacattta 7411033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 187 - 420
Target Start/End: Complemental strand, 23616778 - 23616546
Alignment:
Q  187 aaaaagtgtcgcaaatattaccttattgtaacactttttgtatcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtg 285  Q
    |||||||||||||||| |||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23616778 aaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaacaataaaaaagtgttacatttataatttttgagaagttgtaaaaagtg 23616679  T
Q  286 tcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaatttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttt 385  Q
    ||||||||||||| |  |||           |||| |||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||    
T  23616678 tcgcaaaattgtctaggcta--aatttttttgaatctaccaaatttgtcttcacttaaacttcattcatatttgaattaaccaatattagatacaagttt 23616581  T
Q  386 taataactagtttgaattacatactctataatttc 420  Q
    ||||||| |||||||||||||||||||| ||||||    
T  23616580 taataacaagtttgaattacatactctacaatttc 23616546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 187 - 420
Target Start/End: Complemental strand, 23848175 - 23847943
Alignment:
Q  187 aaaaagtgtcgcaaatattaccttattgtaacactttttgtatcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtg 285  Q
    |||||||||||||||| |||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23848175 aaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaacaataaaaaagtgttacatttataatttttgagaagttgtaaaaagtg 23848076  T
Q  286 tcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaatttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttt 385  Q
    ||||||||||||| |  |||           |||| |||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||    
T  23848075 tcgcaaaattgtctaggcta--aatttttttgaatctaccaaatttgtcttcacttaaacttcattcatatttgaattaaccaatattagatacaagttt 23847978  T
Q  386 taataactagtttgaattacatactctataatttc 420  Q
    ||||||| |||||||||||||||||||| ||||||    
T  23847977 taataacaagtttgaattacatactctacaatttc 23847943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 252 - 510
Target Start/End: Original strand, 7411534 - 7411796
Alignment:
Q  252 ttacatttataatttttgagaagttgtaaaa-gtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaatttgtctttgcttagacttcat 350  Q
    |||||||||||||||||||| |||||||||| |||| | ||||||||| ||||||            |||||| ||||||||||||||||||||||||||    
T  7411534 ttacatttataatttttgaggagttgtaaaaagtgttgtaaaattgtctaaactattttttttttt-aatttatcaaatttgtctttgcttagacttcat 7411632  T
Q  351 tcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctat-aatttcc--cccttcattgttcttattcttgcata 447  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| || ||||  ||||||| |||||||||| |||||||    
T  7411633 tcatatttgaattaaccaatattaaatacaagttttaataactactttgaattacatactctataaaattcccgcccttcactgttcttattattgcata 7411732  T
Q  448 ac-ataatgaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaa 510  Q
    || | ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7411733 acgaaaataaactatgcaacacaatttgaattacatacaaaaatgattacaagttttcatccaa 7411796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 525 - 719
Target Start/End: Complemental strand, 23616165 - 23615971
Alignment:
Q  525 tataaaatatcccactgcactattattattcttccaaccatattatcagccttccattttcttttct--ttgattctttt-gctccaagttgttgacact 621  Q
    ||||||||||||||||||| | ||  ||||| |||||||||||||||||||||||||||| ||||||  ||||||||||| | |||||||||||||||||    
T  23616165 tataaaatatcccactgcattgttcctattcatccaaccatattatcagccttccattttgttttctgcttgattctttttgttccaagttgttgacact 23616066  T
Q  622 ctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataaacaatataatgcat 719  Q
    ||||||||||||||||||||||||||||| |||||||||   ||||||||| |   || |||||||||||| ||||||||||||||||||||||||||    
T  23616065 ctacaaatttattttccttctctttcttcatcaaatctt---gcatccttttacaatattcaactttttgtcctgccaaaataaacaatataatgcat 23615971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 525 - 719
Target Start/End: Complemental strand, 23847561 - 23847367
Alignment:
Q  525 tataaaatatcccactgcactattattattcttccaaccatattatcagccttccattttcttttct--ttgattctttt-gctccaagttgttgacact 621  Q
    ||||||||||||||||||| | ||  ||||| |||||||||||||||||||||||||||| ||||||  ||||||||||| | |||||||||||||||||    
T  23847561 tataaaatatcccactgcattgttcctattcatccaaccatattatcagccttccattttgttttctgcttgattctttttgttccaagttgttgacact 23847462  T
Q  622 ctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataaacaatataatgcat 719  Q
    ||||||||||||||||||||||||||||| |||||||||   ||||||||| |   || |||||||||||| ||||||||||||||||||||||||||    
T  23847461 ctacaaatttattttccttctctttcttcatcaaatctt---gcatccttttacaatattcaactttttgtcctgccaaaataaacaatataatgcat 23847367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 28 - 194
Target Start/End: Original strand, 23679418 - 23679584
Alignment:
Q  28 aacactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttag 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||| | |||| |||||||||| ||||    
T  23679418 aacactactacaataatgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttattaattaaattttgcaacattcgaacaattattag 23679517  T
Q  128 gtaaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtg 194  Q
     |||||  ||||||||||||| ||||||||||||||| |||| | |||  |||||||| ||||||||    
T  23679518 ataaagttcgtgttactaaagagttttagttacattttatagtattatttgtaacaattaaaaagtg 23679584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 28 - 194
Target Start/End: Complemental strand, 23855393 - 23855227
Alignment:
Q  28 aacactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttag 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||| | |||| |||||||||| ||||    
T  23855393 aacactactacaataatgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttattaattaaattttgcaacattcgaacaattattag 23855294  T
Q  128 gtaaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtg 194  Q
     |||||  ||||||||||||| ||||||||||||||| |||| | |||  |||||||| ||||||||    
T  23855293 ataaagttcgtgttactaaagagttttagttacattttatagtattatttgtaacaattaaaaagtg 23855227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 31069084 - 31068971
Alignment:
Q  29 acactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttagg 128  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||    
T  31069084 acactactacaataatgacatttagtaacacttaaaaattgtaactaaatcaagaaaaatgttactaattaaatttagtaaca-ttgaacaattgttagg 31068986  T
Q  129 taaagcccgtgttac 143  Q
    |||||||||||||||    
T  31068985 taaagcccgtgttac 31068971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 51 - 231
Target Start/End: Original strand, 19984995 - 19985176
Alignment:
Q  51 tagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtg 150  Q
    |||||||| | |||||| |||||||||||||| ||| |||||||||||| ||||||||||| | ||| ||||||||||||||| ||  |||||||||| |    
T  19984995 tagtaacactcgaaaatggtaactaaatcaaggaaaatgttactaattagatttagtaacatttgaataattgttaggtaaagtccaggttactaaagag 19985094  T
Q  151 ttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgc-aaatattaccttattgtaacactttttgtatca 231  Q
    |||||||||||||| |||| | |||  |||| ||||||||||||| || |||| |||| |||||||||||||||||||||||    
T  19985095 ttttagttacattttatagtattatatgtaataatcaaaaagtgttgcaaaatgttacattattgtaacactttttgtatca 19985176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 52 - 227
Target Start/End: Complemental strand, 12042276 - 12042099
Alignment:
Q  52 agtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaag-cccgtgttactaaagtg 150  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| | |||||||||||||||||||   | | ||||||||| |    
T  12042276 agtaatatttgaaaattgtaactaaatcaagaaaaatgttactgattcaatttagtaacatttgaacaattgttaggtaaagaaacctattactaaagag 12042177  T
Q  151 ttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgc-aaatattaccttattgtaacactttttgt 227  Q
    |||||||||||||| |||  | |||  |||| ||| |||||||||||| ||||  ||| |||||||||||||||||||    
T  12042176 ttttagttacattttatattattatttgtaataataaaaaagtgtcgcaaaatgatacattattgtaacactttttgt 12042099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 44 - 300
Target Start/End: Original strand, 31571022 - 31571285
Alignment:
Q  44 tgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactc----gaacaattgttaggtaaagcccgtg 139  Q
    |||||| |||||||| ||||||||||| | |||| |||||||| ||||||| |||||| |||||||||       | |||||||||||||||| ||| ||    
T  31571022 tgacatctagtaacacttgaaaattgttattaaaacaagaaaaatgttactgattaaaattagtaacatatatatgtacaattgttaggtaaaacccatg 31571121  T
Q  140 ttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgc-aaatattaccttattgtaacactttttgtatca-tttgta 237  Q
    ||||||||| | ||||| | ||||  |||| | ||||||||||| ||||||| |||||| |||| |||| |||||||||||||||  |||| |    |||    
T  31571122 ttactaaagagctttagatccattatatagtattatcggtaacattcaaaaaatgtcgcaaaatgttacattattgtaacactttccgtattaccgggta 31571221  T
Q  238 acaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtcca 300  Q
    ||| |||||||   |||| |||||||||||| ||||||||| ||||||||||||||||||||||    
T  31571222 acactaaaaaaacattacttttataatttttaagaagttgtaaaaagtgtcgcaaaattgtcca 31571285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 9354492 - 9354393
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||| ||||| | || ||||||||||||||||||| ||||||||||    
T  9354492 atttagtaacaattgaaaattgtaactgaatcaagaaaaatgttactaattaaatttaataacatttgagcaattgttaggtaaagcccatgttactaaa 9354393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 51 - 248
Target Start/End: Original strand, 30786267 - 30786463
Alignment:
Q  51 tagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtg 150  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||| ||| |||||||||||| | ||| ||||||||||||||  || ||||||||||  |    
T  30786267 tagtaacacttgaaaattgtaacttaatcaagaaaaatgttactgattcaatttagtaacatttgaataattgttaggtaaatgccttgttactaaaaag 30786366  T
Q  151 ttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtatcatttgtaacaataaaaaa 248  Q
     |||||| |||||| ||   | |||  |||||||| |||||||||||||||   | | ||||||||||||||||| ||||||   |||||||||||||    
T  30786367 atttagtcacattttatgttattatttgtaacaataaaaaagtgtcgcaaaatatccattattgtaacacttttt-tatcatcaataacaataaaaaa 30786463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 9333664 - 9333565
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    |||| |||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||| | || |||||||||||||||| |  ||||||||||    
T  9333664 attttgtaacaattgaaaattgtaacaaaatcaagaaaaatgttactaattaaatttagtaacatttgagcaattgttaggtaaagtcgatgttactaaa 9333565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 455 - 526
Target Start/End: Complemental strand, 23616504 - 23616433
Alignment:
Q  455 gaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaatgtaacatgtactcta 526  Q
    ||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  23616504 gaactatgcaacataatttgaatgtcatgctaaaatgattacaagttttcatccaatgtaacatgtactcta 23616433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 455 - 526
Target Start/End: Complemental strand, 23847901 - 23847830
Alignment:
Q  455 gaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaatgtaacatgtactcta 526  Q
    ||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  23847901 gaactatgcaacataatttgaatgtcatgctaaaatgattacaagttttcatccaatgtaacatgtactcta 23847830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 31406473 - 31406416
Alignment:
Q  29 acactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaa 86  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31406473 acactactacaataatgacatttagcaacatttgaaaattgtaactaaatcaagaaaa 31406416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 18191952 - 18191889
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaaca 111  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  18191952 atttagtaacaattgaaaattgtaactaaattaagaaaaatgttactaattaaatttagtaaca 18191889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 10869450 - 10869516
Alignment:
Q  63 aaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggta 130  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  10869450 aaaattgta-ctaaatcatgaaaattgttactaattaaatttagtaacatttgaacaattgttaggta 10869516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 42076078 - 42076143
Alignment:
Q  82 gaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    |||||||||||||||||||||||||||||| | ||||||||||||| ||||| || ||||||||||    
T  42076078 gaaaattgttactaattaaatttagtaacatttgaacaattgttagataaagtccatgttactaaa 42076143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 183
Target Start/End: Original strand, 37233061 - 37233164
Alignment:
Q  80 aagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacatttcatagaactatcggt 179  Q
    |||||||  ||||||||||||||||||||||| | || ||||||||||||| || |||||||||||||  |||| ||| |||||| |||| | |||| ||    
T  37233061 aagaaaaaagttactaattaaatttagtaacatttgagcaattgttaggtatagtccgtgttactaaaaagtttcagtaacattttatagtattatcagt 37233160  T
Q  180 aaca 183  Q
    ||||    
T  37233161 aaca 37233164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 300
Target Start/End: Complemental strand, 38449888 - 38449829
Alignment:
Q  242 taaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtcca 300  Q
    ||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  38449888 taaaaaaatgtttcatttataatttttgagaagttgtaaaaagtgtcgcaaaattgtcca 38449829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 457 - 510
Target Start/End: Complemental strand, 5077483 - 5077430
Alignment:
Q  457 actatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaa 510  Q
    ||||| |||||||||||||||||||||| |||||||||||||| ||||||||||    
T  5077483 actatacaacacaatttgaattacatacaaaaatgattacaaggtttcatccaa 5077430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 40402094 - 40402013
Alignment:
Q  66 attgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaa 147  Q
    ||||| ||||||| ||||||| |||||||||||||||||||| ||  | ||||||||||||||||||| | ||||| |||||    
T  40402094 attgtgactaaataaagaaaaatgttactaattaaatttagttacgtttgaacaattgttaggtaaagtctgtgttgctaaa 40402013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 19615135 - 19615036
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaa 146  Q
    ||||||||||| || ||||||||||||||||||| || || |||||||| ||| || | |||||| | | |||| ||||||||||||||| |||||||||    
T  19615135 atttagtaacacttcaaaattgtaactaaatcaaaaacaactgttactatttagatcttgtaacatttg-acaaatgttaggtaaagcccatgttactaa 19615037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 615 - 697
Target Start/End: Original strand, 40422331 - 40422413
Alignment:
Q  615 tgacactctacaaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgc 697  Q
    |||| ||| |||| ||||| |||||| |||  |||||||||||| ||||||||||||| || ||| ||| |||||||||||||    
T  40422331 tgacgctccacaagtttatcttccttgtctgccttcttcaaatcctctcgcatccttttatagtattcagctttttgttctgc 40422413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 147
Target Start/End: Original strand, 15160379 - 15160483
Alignment:
Q  43 atgacatttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgtt 141  Q
    |||| ||||||||||| || |||||||||| |||||||| || || |||||||| |||||| | |||||| | | | || ||||||||||||||| ||||    
T  15160379 atgagatttagtaacacttcaaaattgtaaataaatcaaaaacaaatgttactatttaaatcttgtaacatttg-ataaatgttaggtaaagcccatgtt 15160477  T
Q  142 actaaa 147  Q
    ||||||    
T  15160478 actaaa 15160483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 147
Target Start/End: Complemental strand, 30655284 - 30655180
Alignment:
Q  43 atgacatttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgtt 141  Q
    |||| ||||||||||| || ||||||||||||||||||| || || |||||||| ||| || | |||||| | | | || |||||||||||||| |||||    
T  30655284 atgagatttagtaacacttcaaaattgtaactaaatcaaaaacaaatgttactatttagatcttgtaacatttg-ataaatgttaggtaaagccggtgtt 30655186  T
Q  142 actaaa 147  Q
    ||||||    
T  30655185 actaaa 30655180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 11833344 - 11833293
Alignment:
Q  48 atttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaatta 99  Q
    |||||||||||||||| || ||||||||||||| ||||| ||||| ||||||    
T  11833344 atttagtaacatttgacaaatgtaactaaatcatgaaaaatgttattaatta 11833293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 14117295 - 14117354
Alignment:
Q  52 agtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaaca 111  Q
    ||||||||||| ||| ||| ||||||| |||||||||||| ||| || ||||||||||||    
T  14117295 agtaacatttggaaaatgttactaaatgaagaaaattgttgctattttaatttagtaaca 14117354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 292
Target Start/End: Original strand, 10869817 - 10869900
Alignment:
Q  212 ttgtaacactttttgtatcatttgtaaca-ataaaaaagtgt--tacatttataatttttgagaagttgt-aaaagtgtcgcaaa 292  Q
    |||||||||||||||||||| | |||||| | |||||| |||   |||||||||| |||||||||||||| ||||||||||||||    
T  10869817 ttgtaacactttttgtatcactagtaacataaaaaaaaatgtcacacatttataa-ttttgagaagttgtaaaaagtgtcgcaaa 10869900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 28080092 - 28080141
Alignment:
Q  43 atgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgtta 92  Q
    |||| |||||||||||||| |||| ||||| ||||||||||||| |||||    
T  28080092 atgagatttagtaacatttaaaaaatgtaattaaatcaagaaaaatgtta 28080141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 58
Target Start/End: Original strand, 31406125 - 31406154
Alignment:
Q  29 acactactacaataatgacatttagtaaca 58  Q
    ||||||||||||||||||||||||||||||    
T  31406125 acactactacaataatgacatttagtaaca 31406154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 30 - 660
Target Start/End: Complemental strand, 868 - 217
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |    
T  868 cactactacaataatgacatttagcaacacttgaaaattgtaactaaatcaagaaaattgttactaattaaattttgcaacactcgaacaattgttagat 769  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtat 229  Q
    |||| || ||||||||||| ||||||||||||||| |||| | ||||  ||||||| |||||||||||||||| |||| |||||| ||||||||||||||    
T  768 aaagtccatgttactaaagagttttagttacattttatagtattatctataacaattaaaaagtgtcgcaaatgttacattattggaacactttttgtat 669  T
Q  230 catttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaa 328  Q
    || | |||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| | | ||           |||| |||||||    
T  668 cactagtaacaatgaaaaagtgttacatttataatttttgagtagttgtaaaaagtgtcgcaaaattgtctagatta--aatttttttgaatctaccaaa 571  T
Q  329 tttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataatttcccccttca 428  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||    
T  570 tttgtcttcgcttaaacttcattcatatttgaattaaccaatattagatacaagatttaataacaagtttgatttacatactctacaatttcccccttca 471  T
Q  429 ttgttcttattcttgcat------------------aacataat--gaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatcc 508  Q
     |||||||||||||||||                  |||| |||  ||||||||||||| ||||||||   |||||||||||||||||||||||||||||    
T  470 ctgttcttattcttgcataatgaaaatgaaatatgcaacacaattagaactatgcaacaaaatttgaacgtcatactaaaatgattacaagttttcatcc 371  T
Q  509 aatgtaacatgtactctataaaatatcccactgcactattattattcttccaaccatattatcagccttccattttcttttct--ttgattc-ttttgct 605  Q
    | ||||||||||||||||||||||||||||||| | | ||  ||||| |||||||||||||||| ||||||| ||| ||||||  ||||||| ||||| |    
T  370 agtgtaacatgtactctataaaatatcccactgtattgttcctattcatccaaccatattatcaaccttcca-tttgttttctgcttgattctttttgtt 272  T
Q  606 ccaagttgttgacactctacaaatttattttccttctctttcttcttcaaatctt 660  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  271 ccaagttgttgacactctacaaatttattttccttctctttctttatcaaatctt 217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 282; Significance: 1e-157; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 28 - 479
Target Start/End: Original strand, 6676 - 7129
Alignment:
Q  28 aacactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttag 127  Q
    ||||||||||||||||||  | ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||    
T  6676 aacactactacaataatggtaattagtaacacttaaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttag 6775  T
Q  128 gtaaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgt 227  Q
    |||||||| ||||||||||| |||||||||||||||| |||| |||||| |||||||||||||||||| ||||||  ||||||||||||| |||||||||    
T  6776 gtaaagccggtgttactaaaatgttttagttacattttatagtactatctgtaacaatcaaaaagtgttgcaaatggtaccttattgtaaaactttttgt 6875  T
Q  228 atcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttacca 326  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||            |||||||||    
T  6876 atcacttgtaacaataaaaaagtgttacatttataatttttgaggagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt---aatttacca 6972  T
Q  327 aatttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataa---tttcccc 423  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || |||     
T  6973 aatttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataaaagttcccct 7072  T
Q  424 cttcattgttcttattcttgcataac-ataatgaactatgcaacacaatttgaatta 479  Q
    |||| |||||||||||||||||| || | ||| ||||||||||||||||||||||||    
T  7073 cttctttgttcttattcttgcatcacgaaaataaactatgcaacacaatttgaatta 7129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 208; Significance: 1e-113; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 36 - 472
Target Start/End: Original strand, 51758738 - 51759158
Alignment:
Q  36 tacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcc 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| |||||||||||     
T  51758738 tacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagcaacactcgaacaattattaggtaaagct 51758837  T
Q  136 cgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttgtatcatttg 235  Q
    ||| ||||||||| ||||||||||||||| |||| | |||| |||||||| ||||||||| |||||| |||| |||||||||||||||||||||||   |    
T  51758838 cgtattactaaagagttttagttacattttatagtattatctgtaacaattaaaaagtgttgcaaatgttacattattgtaacactttttgtatcaccag 51758937  T
Q  236 taacaataaaaaagtgttacatttataatttttgagaagttgtaaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaatttgtct 335  Q
    |||||||||||||||||||||||||| ||||||||||||||||  ||||||| |||||||||| | ||||           |||| ||||||| ||||||    
T  51758938 taacaataaaaaagtgttacatttatgatttttgagaagttgt-gaagtgtcacaaaattgtctagacta--aatttttttgaatctaccaaa-ttgtct 51759033  T
Q  336 ttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctataatttcccccttcattgttct 435  Q
    ||||||||||||||||||||||| |||||||||||||||||||||             |||||||||||||||||||| |||||||||||||| | ||||    
T  51759034 ttgcttagacttcattcatatttcaattaaccaatattagataca-------------agtttgaattacatactctaaaatttcccccttcactattct 51759120  T
Q  436 tattcttgcataa-cataatgaactatgcaacacaatt 472  Q
    |||||||||||||  | |||||| ||||||||||||||    
T  51759121 tattcttgcataatgaaaatgaattatgcaacacaatt 51759158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 529 - 762
Target Start/End: Original strand, 51759202 - 51759438
Alignment:
Q  529 aaatatcccactgcactattattattcttccaaccatattatcagccttccattttcttttct--ttgattctttt-gctccaagttgttgacactctac 625  Q
    |||||||||| |||| | || |||||| |||||||||||||||| ||||||||||| ||||||  ||||||||||| |||||||||||||||||||||||    
T  51759202 aaatatcccattgcattgttcttattcatccaaccatattatcaaccttccattttattttctgcttgattctttttgctccaagttgttgacactctac 51759301  T
Q  626 aaatttattttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataaacaatataatgcattcttaa 725  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |  ||| |||||||||| | ||||||||||||| ||||||||| || |||||    
T  51759302 aaatttattttccttgtctttcttcttcaaatcttctcgcatccttttacagtattcaactttttatcctgccaaaataaataatataatggatgcttaa 51759401  T
Q  726 gcagtggtcacatataaactacaagatagtcacatgt 762  Q
    | ||| ||||||||||||||| |||||||||||||||    
T  51759402 gtagttgtcacatataaactataagatagtcacatgt 51759438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 30 - 281
Target Start/End: Original strand, 13208590 - 13208843
Alignment:
Q  30 cactactacaataatgacatttagtaaca-tttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttagg 128  Q
    |||||||||||| |||| ||||||||| | |||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||| |||| |||||||||    
T  13208590 cactactacaatgatgatatttagtaatactttgaaaattgtaattaaattaagaaaaatgttactaattaaatttagtaccacttgaaccattgttagg 13208689  T
Q  129 taaagcccgtgttactaaagtgttt--tagttacatttcatagaactatcggtaacaatcaaaaagtgtcgcaaatattaccttattgtaacactttttg 226  Q
    |||| ||||||||||||||||||||  |||||| |||| |||  |||||| |||||||| |||||||||  ||||| ||| |||||||||| ||||||||    
T  13208690 taaaacccgtgttactaaagtgttttatagttatattttataatactatcagtaacaataaaaaagtgtaacaaatgttatcttattgtaaaactttttg 13208789  T
Q  227 tatcatttgtaacaataaaaaagtgttacatttataatttttgagaagttgtaaa 281  Q
    ||||| |||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  13208790 tatcacttgtgacaataaaaaagtgttatatttataa-ttttgagaagttgtaaa 13208843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 16222763 - 16222881
Alignment:
Q  36 tacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcc 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  16222763 tacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaaatgttactaataaaatttagtaacacttgaataattgttaggtaaagcc 16222862  T
Q  136 cgtgttactaaagtgtttt 154  Q
    ||||||||||||| |||||    
T  16222863 cgtgttactaaagagtttt 16222881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 44 - 298
Target Start/End: Original strand, 18308141 - 18308397
Alignment:
Q  44 tgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttac 143  Q
    |||||| |||||||||||||||||||| ||||||||||||||| ||||||  |||| | ||| ||||| |   ||||||||||||||||||| |||||||    
T  18308141 tgacatctagtaacatttgaaaattgttactaaatcaagaaaaatgttacagattacaattattaacatttctacaattgttaggtaaagcctgtgttac 18308240  T
Q  144 taaagtgttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgc-aaatattaccttattgtaacactttttgtatcatttgtaacaat 242  Q
    | ||| | ||||||||||||| |||| | | |  |||||| |||||||||||| | |||| |||| |||||||||||||||||||||||    ||||| |    
T  18308241 tgaagggctttagttacattttatagtattgtttgtaacattcaaaaagtgtcacaaaatgttacattattgtaacactttttgtatcaccgataacact 18308340  T
Q  243 aaaaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtc 298  Q
    | |||| ||||||||||||||||||||||||||| | |||||||| ||||| |||||    
T  18308341 agaaaaatgttacatttataatttttgagaagttataaaaagtgttgcaaagttgtc 18308397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 51 - 248
Target Start/End: Original strand, 28636903 - 28637101
Alignment:
Q  51 tagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtg 150  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||| | ||| ||||||||||||||| |  |||| |||||| |    
T  28636903 tagtaacatttaaaaattgtaactaaatcaagaaaaatgttactaattcaatttagtaacatttgaataattgttaggtaaagtcactgttgctaaagag 28637002  T
Q  151 ttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgca-aatattaccttattgtaacactttttgtatcatttgtaacaataaaaaa 248  Q
     ||||||||||||| |||| | ||||    ||||||||||||||||||| ||| |||| |||||||||||||||||||||||   |||| |||||||||    
T  28637003 atttagttacattttatagtaatatctacgacaatcaaaaagtgtcgcacaatgttacattattgtaacactttttgtatcaccagtaataataaaaaa 28637101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 51 - 376
Target Start/End: Original strand, 897455 - 897779
Alignment:
Q  51 tagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtg 150  Q
    |||| ||| ||||||||||| ||||||| ||||||| |||| ||||||||||||||||||| | ||||||||||||||| |||  | ||||||||||| |    
T  897455 tagttacagttgaaaattgttactaaatgaagaaaaatgttcctaattaaatttagtaacaattgaacaattgttaggt-aagttcatgttactaaagag 897553  T
Q  151 ttttagttacatttcatagaactatcggtaacaatcaaaaagtgtcgc-aaatattaccttattgtaacactttttgtatcatttgtaacaataaaaaag 249  Q
     | ||||||||||| ||| || |||  |||||| | ||||| | |||| |||| |||| |||||||||||||||||||||||   |||||||| |||||     
T  897554 ctatagttacattttatacaattatttgtaacattaaaaaattctcgcaaaatgttacattattgtaacactttttgtatcaccagtaacaattaaaaaa 897653  T
Q  250 tgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaattgtccaaactannnnnnnnnnngaatttaccaaatttgtctttgcttagacttc 348  Q
    |||||||||||   |||||   ||||||| |||||||| |||||||  |  | || |           ||||||||||||||||| ||||||||||||||    
T  897654 tgttacatttagtttttttttaaagttgtaaaaagtgttgcaaaataatatagacca--atgaattgtgaatttaccaaatttgtttttgcttagacttc 897751  T
Q  349 attcatatttgaattaaccaatattaga 376  Q
    |||||||||| ||||||| | |||||||    
T  897752 attcatatttaaattaactagtattaga 897779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 44 - 269
Target Start/End: Complemental strand, 39368747 - 39368519
Alignment:
Q  44 tgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttac 143  Q
    |||||| |||||||   |||||| ||| ||||||||||||||| |||||||||||||| ||||| ||| |   |||||||||||| ||||| | || |||    
T  39368747 tgacatctagtaacccatgaaaaatgttactaaatcaagaaaaatgttactaattaaaattagtcacatttatacaattgttaggcaaagcacatgctac 39368648  T
Q  144 taaagtgttttagttaca-tttcatagaactatcggtaacaatcaaaaagtgtcgc-aaatattaccttattgtaacactttttgtatcatttgtaacaa 241  Q
    ||||| | || ||||||| ||| |||| | |||| |||||| | |||||||||||| |||| |||| |||||||||||||||||||||||   ||||||     
T  39368647 taaagagcttcagttacatttttatagtattatcagtaacatttaaaaagtgtcgcaaaatgttacattattgtaacactttttgtatcaccggtaacac 39368548  T
Q  242 t-aaaaaagtgttacatttataatttttg 269  Q
    | |||||| ||||||||||||||||||||    
T  39368547 taaaaaaaatgttacatttataatttttg 39368519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 12189951 - 12190058
Alignment:
Q  50 ttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagt 149  Q
    |||| |||| || |||| ||||||||||||||||||| | |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||     
T  12189951 ttagaaacaattaaaaaatgtaactaaatcaagaaaaatattactaattaaatttagtaacatttgaacaattgttaggtaaagcccgtgttactaaaga 12190050  T
Q  150 gttttagt 157  Q
    ||||||||    
T  12190051 gttttagt 12190058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 37097463 - 37097371
Alignment:
Q  28 aacactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaa 120  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| || ||||||||||||| | ||||||    
T  37097463 aacactactacaataatgacatttagtaacacttgaaaattgtaactaaatcaagaaaaatgttactgataaaatttagtaacatttgaacaa 37097371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 51 - 136
Target Start/End: Complemental strand, 5911764 - 5911679
Alignment:
Q  51 tagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagccc 136  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  5911764 tagtaacacttgaaaattttaactaaatcaagaaaaatgttactgattaaatttagtaacacttgaacaattgttaggtaaagccc 5911679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 15204570 - 15204675
Alignment:
Q  31 actactacaataatgacatttagtaacatttgaaaattgtaac----taaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgtta 126  Q
    |||||||||||||||||||||| ||| ||||||||||||||||    ||||||||||||| |||| |||| |||||||||||||||| ||||||||||||    
T  15204570 actactacaataatgacatttaataatatttgaaaattgtaactaactaaatcaagaaaaatgttgctaactaaatttagtaacacttgaacaattgtta 15204669  T
Q  127 ggtaaa 132  Q
    ||||||    
T  15204670 ggtaaa 15204675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 15214306 - 15214409
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||| | |||||||||||| |||||||||| |||||||||||||||| | |||||||||||||||||||| | | ||||||||||| |||    
T  15214306 cactactacaataacggcatttagtaacacttgaaaattgcaactaaatcaagaaaaattttactaattaaatttagtaatatttgaacaattgttgggt 15214405  T
Q  130 aaag 133  Q
    ||||    
T  15214406 aaag 15214409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 30 - 188
Target Start/End: Original strand, 1843932 - 1844089
Alignment:
Q  30 cactactacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggt 129  Q
    |||||||||||||||||| |||||||||| || ||||||||||||  |  ||||||| ||||||| ||| |||||||||||| | |||||||||||||||    
T  1843932 cactactacaataatgacctttagtaacactt-aaaattgtaactggaataagaaaaatgttactgattgaatttagtaacatttgaacaattgttaggt 1844030  T
Q  130 aaagcccgtgttactaaagtgttttagttacatttcatagaactatcggtaacaatcaa 188  Q
    ||| ||| ||||||| ||| | |||| || ||||| |||| | |||| |||||||||||    
T  1844031 aaaccccatgttactgaagggctttaattgcattttatagtattatctgtaacaatcaa 1844089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 15193902 - 15193980
Alignment:
Q  34 actacaataatgacatttagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacac 112  Q
    ||||| |||| |||||||||||||| |||||||| | ||| |||||||||||| |||||||||||||||||| ||||||    
T  15193902 actactataacgacatttagtaacacttgaaaatagcaacgaaatcaagaaaaatgttactaattaaatttattaacac 15193980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 51 - 145
Target Start/End: Original strand, 17112925 - 17113019
Alignment:
Q  51 tagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttacta 145  Q
    |||||| | ||||||||||| ||||||||||||||| |  ||||| |||||||| |||||||| ||||||||||||| |||||| | ||||||||    
T  17112925 tagtaataattgaaaattgttactaaatcaagaaaaatagtactagttaaattttgtaacacttgaacaattgttagttaaagctcatgttacta 17113019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 3399642 - 3399703
Alignment:
Q  71 aactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaa 132  Q
    |||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  3399642 aactaaatcatgaaaaatgttactaattaaatttagtaacatttgaacaattgttaggtaaa 3399703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 455 - 498
Target Start/End: Original strand, 51759160 - 51759203
Alignment:
Q  455 gaactatgcaacacaatttgaattacatactaaaatgattacaa 498  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||    
T  51759160 gaactatgcaacacaatttgaataacatactaaaacgattacaa 51759203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 147
Target Start/End: Complemental strand, 20427841 - 20427737
Alignment:
Q  43 atgacatttagtaacatttgaaaattgtaactaaatcaagaa-aattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgtt 141  Q
    |||| ||||||||||| || ||||||||||||||||||| || || |||||||| ||| || | |||||  | | |||| ||||||||||| ||||||||    
T  20427841 atgagatttagtaacaattcaaaattgtaactaaatcaaaaacaaatgttactatttagatcttgtaacttttg-acaaatgttaggtaaaacccgtgtt 20427743  T
Q  142 actaaa 147  Q
    ||||||    
T  20427742 actaaa 20427737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 507
Target Start/End: Original strand, 897870 - 897913
Alignment:
Q  464 aacacaatttgaattacatactaaaatgattacaagttttcatc 507  Q
    |||||||||| |||||||||||||||  ||||||||||||||||    
T  897870 aacacaatttcaattacatactaaaacaattacaagttttcatc 897913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 28637571 - 28637622
Alignment:
Q  245 aaaagtgttacatttataatttttgagaagttgt-aaaagtgtcgcaaaatt 295  Q
    |||| ||||||||| |||||||||||| |||||| |||||||||||||||||    
T  28637571 aaaattgttacattcataatttttgagtagttgtaaaaagtgtcgcaaaatt 28637622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 39368030 - 39367984
Alignment:
Q  261 taatttttgagaagttgtaaaa--gtgtcgcaaaattgtccaaacta 305  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||    
T  39368030 taatttttgagaagttgtaaaaaagtgtcgcaaaattgtccagacta 39367984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 106; Significance: 2e-52; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 642 - 807
Target Start/End: Original strand, 1008 - 1172
Alignment:
Q  642 tctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataaacaatataatgcattcttaagcagtggtcacatata 741  Q
    |||||||||||||||||||||| |||||||| |  ||| | ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||    
T  1008 tctttcttcttcaaatcttctcacatccttttacagtattaaactttttgttctgccaaaataa-caatataatgcatgcttaagtagtggtcacatata 1106  T
Q  742 aactacaagatagtcacatgtagcagcatggaaacacttgcaatgatatcaacaatcatagagcaa 807  Q
    ||||| || ||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  1107 aactataacataatcacatgtagcagcatagaaaaacttgcaatgatatcaacaatcatagagcaa 1172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 99; Significance: 2e-48; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 633 - 815
Target Start/End: Complemental strand, 192 - 11
Alignment:
Q  633 ttttccttctctttcttcttcaaatcttctcgcatcctttaatcgtaatcaactttttgttctgccaaaataaacaatataatgcattcttaagcagtgg 732  Q
    |||||||| |||||||||||||||||||||| |||||||| || ||| |||||||||||||||| ||||| |||||||||||||||| |||| |  ||||    
T  192 ttttcctt-tctttcttcttcaaatcttctcacatccttttatagtattcaactttttgttctggcaaaacaaacaatataatgcatgcttatgtggtgg 94  T
Q  733 tcacatataaactacaagatagtcacatgtagcagcatggaaacacttgcaatgatatcaacaatcatagagcaatatacaat 815  Q
    |||||||||||||| || ||||||||| |||||| ||| |||| ||||||||||||||||||||||| | ||||| |||||||    
T  93 tcacatataaactataacatagtcacaggtagcatcatagaaaaacttgcaatgatatcaacaatcacaaagcaacatacaat 11  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 333 - 529
Target Start/End: Complemental strand, 438 - 247
Alignment:
Q  333 tctttgcttagacttcattcatatttgaattaaccaatattagatacaagttttaataactagtttgaattacatactctata--atttcccccttcatt 430  Q
    ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| | ||||||||||||||||||||  ||||||||  || ||    
T  438 tctttgcttagacttcattcatatttgaattaac--atattagagacaagttttaataaccaatttgaattacatactctataaaatttcccctgtc-tt 342  T
Q  431 gttcttattcttgcataacataatgaactatgcaacacaatttgaattacatactaaaatgattacaagttttcatccaatgtaacatgtactctataa 529  Q
    |  | || |       |||   ||| ||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  341 g--cataatgaaaatgaact--atgcactatgcaacacattttgaattacataataaaacgattacaagttttcatccaatgtaacatgtactctataa 247  T

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Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 446383 - 446277
Alignment:
Q  51 tagtaacatttgaaaattgtaactaaatcaagaaaattgttactaattaaatttagtaacactcgaacaattgttaggtaaagcccgtgttactaaagtg 150  Q
    |||||||| | ||| |||||||||||||||   |||||||||| |||||||||| |||||| | |||||||||||||| |||| || | ||||||||| |    
T  446383 tagtaacaatcgaagattgtaactaaatcatacaaattgttaccaattaaatttggtaacatttgaacaattgttaggaaaagtccatattactaaagag 446284  T
Q  151 ttttagt 157  Q
     ||||||    
T  446283 ctttagt 446277  T

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