View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9807_low_16 (Length: 238)
Name: NF9807_low_16
Description: NF9807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9807_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 46619214 - 46618997
Alignment:
| Q |
8 |
aagcagagattatacatcaaatctatcacgctggcatagctggctccaatagctaaagacaattacagttacttcttttcttggctacaatttatatcta |
107 |
Q |
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| T |
46619214 |
aagcaaagattatacatcaaatctatcacgctggcatagctggctccaatagctaaagacaattacagttacttcttttcttggctacaatttatatcta |
46619115 |
T |
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| Q |
108 |
tatccattcaaactcaccacagcataaaccagaactttctacatttttggataaattggaaaaatttgtattgggtactgcatgtcgtgtgcgaac-aat |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |
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| T |
46619114 |
tatccattcaaactcaccacagcataaaccagaactttctacatttttggataaattggaaaaatttgtattgggtactgcatgtcatgtgcgaacaaat |
46619015 |
T |
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| Q |
207 |
aagttttaggttcgattt |
224 |
Q |
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|| ||||||||||||||| |
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| T |
46619014 |
aaattttaggttcgattt |
46618997 |
T |
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