View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9807_low_18 (Length: 228)

Name: NF9807_low_18
Description: NF9807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9807_low_18
NF9807_low_18
[»] chr5 (17 HSPs)
chr5 (19-216)||(30750751-30750948)
chr5 (19-216)||(30061477-30061674)
chr5 (19-216)||(30337329-30337526)
chr5 (22-216)||(30676095-30676289)
chr5 (19-216)||(30712232-30712429)
chr5 (19-216)||(30484506-30484703)
chr5 (22-216)||(29854416-29854610)
chr5 (22-216)||(29873279-29873473)
chr5 (19-215)||(30436919-30437115)
chr5 (22-216)||(30401179-30401376)
chr5 (31-216)||(30207627-30207812)
chr5 (104-216)||(30476480-30476592)
chr5 (129-212)||(17417507-17417590)
chr5 (19-216)||(30241182-30241382)
chr5 (127-216)||(30520537-30520626)
chr5 (127-216)||(30560877-30560966)
chr5 (122-184)||(17984021-17984083)
[»] chr4 (2 HSPs)
chr4 (31-216)||(20295398-20295583)
chr4 (125-216)||(52353064-52353155)
[»] chr7 (1 HSPs)
chr7 (19-216)||(26708437-26708634)
[»] chr3 (1 HSPs)
chr3 (22-215)||(25292754-25292947)
[»] chr1 (2 HSPs)
chr1 (122-216)||(7100526-7100620)
chr1 (134-216)||(7580638-7580720)


Alignment Details
Target: chr5 (Bit Score: 186; Significance: 1e-101; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 19 - 216
Target Start/End: Complemental strand, 30750948 - 30750751
Alignment:
Q  19 ggtaacaagttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccag 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30750948 ggtaacaggttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccag 30750849  T
Q  119 atcaagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30750848 atcaagtagctgaagggcgccaaaccggctccattattgctgaaccaaaagtgtttggacgagaagttgataaagaaaagattgctgagtttcttctc 30750751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 19 - 216
Target Start/End: Complemental strand, 30061674 - 30061477
Alignment:
Q  19 ggtaacaagttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccag 118  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30061674 ggtaacaggttcaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggcactcttagggaaatcccag 30061575  T
Q  119 atcaagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30061574 atcaagtagctgaagggcgccaaaccggctccattattgctgaaccaaaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 30061477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 30337329 - 30337526
Alignment:
Q  19 ggtaacaagttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccag 118  Q
    ||||||| ||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30337329 ggtaacaggttgaaagagattacaaggaggttagataatattgctgaacgtaagaacaagttttctctacagatgggtggaactcttagggaaatcccag 30337428  T
Q  119 atcaagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30337429 atcaagtagctgaagggcgccaaaccggctccattattgctgaaccaaaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 30337526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 30676095 - 30676289
Alignment:
Q  22 aacaagttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccagatc 121  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30676095 aacaggttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccagatc 30676194  T
Q  122 aagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    |||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  30676195 aagtagctgaagggcgccaaaccggctcaattattgctgaatcaaaagtgtttggacgagaagttgatcaagaaaagattgtcgagtttcttctc 30676289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 30712232 - 30712429
Alignment:
Q  19 ggtaacaagttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccag 118  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30712232 ggtaacaggttcaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccag 30712331  T
Q  119 atcaagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    |||||||||||||||||||||||||| ||||||    |  |||| || ||| | | ||| ||||   |||||||||||||||||| ||||||||||||    
T  30712332 atcaagtagctgaagggcgccaaaccagctccacccctcttgaatcaaaagcgctgggaagagacaatgataaagaaaagattgtcgagtttcttctc 30712429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 216
Target Start/End: Complemental strand, 30484703 - 30484506
Alignment:
Q  19 ggtaacaagttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccag 118  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||||||    
T  30484703 ggtaacaggttgaaagagattacaaggaggttagatgatattgctgaaagaaagaacaagttttctctacagacgggtgaaactcttagggtaatcccag 30484604  T
Q  119 atcaagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    |||||||||||||||||||||||||| ||||||    |  |||| || |||  || ||| |||| | |||||||||||||||||| ||||||||||||    
T  30484603 atcaagtagctgaagggcgccaaaccagctccacccctcttgaatcaaaagcattaggaagagacgatgataaagaaaagattgtcgagtttcttctc 30484506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 29854610 - 29854416
Alignment:
Q  22 aacaagttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccagatc 121  Q
    |||| ||| ||||||||||||||||  || |||||||||||||| |||||||||||||||| ||||| |  ||||   | | ||| ||||| | || ||     
T  29854610 aacaggttgaaagagattacaaggaaattggatgatattgctgatagtaagaacaagttttttctacgggagggtactattgttaaggaaagctcaaatg 29854511  T
Q  122 aagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    ||||||||||| |||| |||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29854510 aagtagctgaatggcgtcaaaccagctccattattgctgaaccaaaagtgtttggacgagaagatgataaagaaaagattgttgagtttcttctc 29854416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 29873473 - 29873279
Alignment:
Q  22 aacaagttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccagatc 121  Q
    |||| ||| ||||||||||||||||| || |||||||||||||| |||||||||||||||| ||||| |  ||||   | | ||| ||||| | || ||     
T  29873473 aacaggttgaaagagattacaaggagattggatgatattgctgatagtaagaacaagttttttctacgggagggtactattgttaaggaaagctcaaatg 29873374  T
Q  122 aagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    ||||||||||| |||| |||||| |||||||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  29873373 aagtagctgaatggcgtcaaaccagctccattattgttgaaccaaaagtatttggacgagaagatgataaagaaaagattgttgagtttcttctc 29873279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 30437115 - 30436919
Alignment:
Q  19 ggtaacaagttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccag 118  Q
    ||||||| ||| |||||||||||| ||||||| |||  |||||||||| ||||||||||||||||||| || | ||||| |||||||||||||| |||||    
T  30437115 ggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctccatacgggtgtaactcttagggaaagcccag 30437016  T
Q  119 atcaagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttct 215  Q
    ||||||  |||||||||||||||||| ||||||    |  |||| || ||||||| ||| |||| | ||||||||||||||||||  ||||||||||    
T  30437015 atcaagctgctgaagggcgccaaaccagctccacccctcttgaaacaaaagtgttaggaagagacgatgataaagaaaagattgtccagtttcttct 30436919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 30401376 - 30401179
Alignment:
Q  22 aacaagttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctac-agatggg--tggaactcttagggaaatcccag 118  Q
    |||| ||| |||||||||||||| || || |||||||||||||| | ||||||||| |||  ||||| ||||||   || |  | ||||||||| | |||    
T  30401376 aacaggttgaaagagattacaagaagattggatgatattgctgatattaagaacaaatttcttctacgagatggtactgtatatgttagggaaagctcag 30401277  T
Q  119 atcaagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    || |||||| |||| |||| |||| |  ||||||||||||| |||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||    
T  30401276 atgaagtagatgaatggcgtcaaatcaactccattattgctaaaccagaagtgtttggacgaaaagatgataaagaaaagatttttgagtttcttctc 30401179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 216
Target Start/End: Complemental strand, 30207812 - 30207627
Alignment:
Q  31 aaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctcta-cagatgggtggaactcttagggaaatcccagatcaagtagct 129  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||  | ||  ||| |  ||||||| |||||||||   ||  | |||||||     
T  30207812 aaagagattacaaggaggttagatgatattgctgaaagtaaaaacaagtttcatttaggaga-gaatggaacttttagggaaagatcaattgaagtagca 30207714  T
Q  130 gaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    ||| |||| |||||  |||| ||||||||||||||| |||| ||||| ||||||| ||||||||| |||||| | ||||||||||||    
T  30207713 gaatggcgtcaaactagctctattattgctgaaccaaaagtatttgggcgagaagatgataaagagaagattatcgagtttcttctc 30207627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 30476592 - 30476480
Alignment:
Q  104 ttagggaaatcccagatcaagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgt 203  Q
    |||||||||  ||| || |||| |||||| ||||||||||  |||||||||||||||||||  ||||||||||||||| || ||||| ||| | ||||||    
T  30476592 ttagggaaaggccaaatgaagttgctgaatggcgccaaacaagctccattattgctgaacccaaagtgtttggacgagtagatgatagagagaggattgt 30476493  T
Q  204 tgagtttcttctc 216  Q
     ||||||||||||    
T  30476492 cgagtttcttctc 30476480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 17417507 - 17417590
Alignment:
Q  129 tgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttct 212  Q
    |||| ||||||||||| ||||| |||||||||||||| | ||||||||||| |||| ||||| | | |||||||||||||||||    
T  17417507 tgaatggcgccaaaccagctcctttattgctgaaccaaaggtgtttggacgggaagatgatacaaagaagattgttgagtttct 17417590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 30241182 - 30241382
Alignment:
Q  19 ggtaacaagttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggt---ggaactcttagggaaatcc 115  Q
    ||||||| |||  |||||||||   ||||||| |||||||||||||| || | ||| ||||||| ||| |||   |||   |||||| || |||||| ||    
T  30241182 ggtaacaggttggaagagattaacgggaggttggatgatattgctgataggaggaagaagttttttctgcaggaaggtactggaactgttcgggaaagcc 30241281  T
Q  116 cagatcaagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttct 215  Q
    || || | ||||||||| |||| |||||| || | |||||| |||||||| ||||||||||||||||||  |||||| | |||||| |  ||||||||||    
T  30241282 caaatgacgtagctgaatggcgtcaaaccagcgctattattactgaaccaaaagtgtttggacgagaagacgataaaaagaagattatccagtttcttct 30241381  T
Q  216 c 216  Q
    |    
T  30241382 c 30241382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 30520537 - 30520626
Alignment:
Q  127 gctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    |||||| |||| |||||  |||| ||||||||||||||| |||| | ||| ||||||| ||||||||| |||||||| ||||||||||||    
T  30520537 gctgaatggcgtcaaactagctctattattgctgaaccaaaagtatatggtcgagaagatgataaagagaagattgtcgagtttcttctc 30520626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 30560877 - 30560966
Alignment:
Q  127 gctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    |||||| |||| |||||  |||| ||||||||||||||| |||| | ||| ||||||| ||||||||| |||||||| ||||||||||||    
T  30560877 gctgaatggcgtcaaactagctctattattgctgaaccaaaagtatatggtcgagaagatgataaagagaagattgtcgagtttcttctc 30560966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 17984083 - 17984021
Alignment:
Q  122 aagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaag 184  Q
    |||| |||||| ||||||||||| || || ||||||||||| || ||||||||||||||||||    
T  17984083 aagtggctgaatggcgccaaaccagccccgttattgctgaatcaaaagtgtttggacgagaag 17984021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 31 - 216
Target Start/End: Original strand, 20295398 - 20295583
Alignment:
Q  31 aaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccagatcaagtagctg 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20295398 aaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccagatcaagtagctg 20295497  T
Q  131 aagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    |||||||||||||| ||||||    |  |||| || |||  || ||| |||| | ||||||| |||||||||| ||||||||||||    
T  20295498 aagggcgccaaaccagctccacccctcttgaatcaaaagcattgggaagagacgatgataaaaaaaagattgtcgagtttcttctc 20295583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 216
Target Start/End: Complemental strand, 52353155 - 52353064
Alignment:
Q  125 tagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    |||||||| ||||||||||| |||||||| || |||||||  || | ||||||||  |||  |||||||| |||||||  ||||||||||||    
T  52353155 tagctgaatggcgccaaaccagctccatttttactgaaccgaaaatctttggacggaaagaagataaagagaagattgccgagtttcttctc 52353064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 216
Target Start/End: Complemental strand, 26708634 - 26708437
Alignment:
Q  19 ggtaacaagttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccag 118  Q
    ||||||| ||| |||||||||||| ||||||| |||  |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||     
T  26708634 ggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctacagacgggtggaactcttagggaaagcccat 26708535  T
Q  119 atcaagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    |||||||||||||||||||||||||| ||||||    |  |||| || ||| ||| ||| |||| | |||||||||||||||||| ||||||||||||    
T  26708534 atcaagtagctgaagggcgccaaaccagctccacccctcttgaaacaaaagcgttgggaagagacgatgataaagaaaagattgtcgagtttcttctc 26708437  T

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Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 215
Target Start/End: Original strand, 25292754 - 25292947
Alignment:
Q  22 aacaagttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaatcccagatc 121  Q
    |||||||| ||||||||||||||||| || ||||||||||||| || |||||||||||||  ||| |    |||||||||| ||||||||| | ||  |     
T  25292754 aacaagttgaaagagattacaaggagattggatgatattgctgcaactaagaacaagtttcttcttcgacagggtggaactgttagggaaagctcaactg 25292853  T
Q  122 aagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttct 215  Q
    |||||||||||  |||||||||  | || |||||||| |||||| |||| ||||||||||||| ||||||||| |||| ||| |||||||||||    
T  25292854 aagtagctgaatagcgccaaactagttctattattgccgaaccaaaagtatttggacgagaagatgataaagagaagactgtcgagtttcttct 25292947  T

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Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 7100620 - 7100526
Alignment:
Q  122 aagtagctgaagggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    |||| |||||| ||||||||||| ||||| |||||||||||||| |  ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  7100620 aagtggctgaatggcgccaaaccagctcctttattgctgaaccaaagatgtttggacgagaagatgataaagagaagattgttgagtttcttctc 7100526  T

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Target: chr1; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 7580638 - 7580720
Alignment:
Q  134 ggcgccaaaccggctccattattgctgaaccagaagtgtttggacgagaagttgataaagaaaagattgttgagtttcttctc 216  Q
    ||||||||||| ||||||||||||| |||||| | |||||||||||||||| ||||||||| | |||||||||||||||||||    
T  7580638 ggcgccaaaccagctccattattgccgaaccaaaggtgtttggacgagaagatgataaagagaggattgttgagtttcttctc 7580720  T

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