View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9807_low_5 (Length: 423)
Name: NF9807_low_5
Description: NF9807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9807_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 376; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 18 - 413
Target Start/End: Complemental strand, 42450668 - 42450273
Alignment:
| Q |
18 |
ccaatttcataacttcatccactcctccaacaaaccttcccttcacaaacacaacaggaacttgaacttgtttcattcccataagcttccttaattcctc |
117 |
Q |
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| T |
42450668 |
ccaatttcataatttcatccactcctccaacaaaccttcccttcacaaacacaacaggaacttgaacttgtttcattcccataagcttccttaattcctc |
42450569 |
T |
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| Q |
118 |
cttaaacccagaatccatagacacatcgcgctcacgcaaacacacacaatacgattcaatgatcgatcgaactttgttacaatcctcaaatgtctttctg |
217 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42450568 |
cttaaacccagaatccattgacacatcgcgctcacgcaaacacacacaatacgattcaatgatcgatcgaactttgttacaatcctcaaatgtctttctg |
42450469 |
T |
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| Q |
218 |
attcctctcaatgtggttgtgtagattacaacagaattttctcctcccggaggacacttgttctcaaacaagttcaaaagggcaattgtatcgagagatt |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
42450468 |
attcctctcaatgtggttgtgtagattacaacagaattttctcctcccggaggacacttgttctcaaacaagttcaaaagggcaattgaatcgagagatt |
42450369 |
T |
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| Q |
318 |
ttctcgctcttcgtgtttttggtgttgcaaaaacaattctcttgatttgttcctcctcttctgaaagttccttttcataggatgcaataatctctg |
413 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42450368 |
ttctcgctcttcgtgttttcggtgttgcaaaaacaattctcttgatttgttcttcctcttctgaaagttccttttcataggatgcaataatctctg |
42450273 |
T |
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