View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9808_high_12 (Length: 212)
Name: NF9808_high_12
Description: NF9808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9808_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 38839159 - 38839325
Alignment:
| Q |
15 |
agataatggcaagccaataaaatcccacgatcttgtggtaaggagctgtcttttttcattgggaaagacaaacaccactccatcatgttctacaacacca |
114 |
Q |
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| T |
38839159 |
agataatggcaagccaataaaatcccacgatcttgtggtaaggagctgtcttttttcattgggaaagacaaacaccactccatcatgttctacaacacca |
38839258 |
T |
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| Q |
115 |
attttctcagtcaacaaatatacaaatattattaattaaggaggaaagatagctcatttttcaatag |
181 |
Q |
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| T |
38839259 |
attttctcagttaacaaatatacaaatattattaattaaggaggaaagatagctcatttttcaatag |
38839325 |
T |
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