View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9810_low_1 (Length: 968)

Name: NF9810_low_1
Description: NF9810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9810_low_1
NF9810_low_1
[»] chr7 (5 HSPs)
chr7 (11-952)||(24907083-24908020)
chr7 (25-467)||(24889863-24890303)
chr7 (526-668)||(2212658-2212799)
chr7 (809-884)||(18264575-18264650)
chr7 (816-889)||(23869296-23869369)
[»] chr1 (4 HSPs)
chr1 (761-952)||(31302245-31302432)
chr1 (524-631)||(35154572-35154681)
chr1 (806-874)||(25244983-25245051)
chr1 (806-884)||(25275089-25275167)
[»] chr5 (5 HSPs)
chr5 (525-645)||(11026769-11026889)
chr5 (524-677)||(24403656-24403809)
chr5 (808-884)||(8933907-8933983)
chr5 (806-884)||(5708120-5708198)
chr5 (817-874)||(9272896-9272953)
[»] chr4 (3 HSPs)
chr4 (527-631)||(40350454-40350558)
chr4 (523-659)||(6217640-6217776)
chr4 (807-889)||(41189587-41189669)
[»] chr3 (4 HSPs)
chr3 (526-610)||(14988302-14988387)
chr3 (806-864)||(9129510-9129568)
chr3 (806-864)||(9137617-9137675)
chr3 (806-860)||(34365439-34365493)
[»] chr6 (1 HSPs)
chr6 (806-884)||(26857966-26858044)
[»] chr8 (2 HSPs)
chr8 (527-596)||(7561317-7561386)
chr8 (523-610)||(12768583-12768670)
[»] scaffold0102 (1 HSPs)
scaffold0102 (806-884)||(14385-14463)
[»] chr2 (2 HSPs)
chr2 (806-884)||(17893953-17894031)
chr2 (806-884)||(43323718-43323796)


Alignment Details
Target: chr7 (Bit Score: 870; Significance: 0; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 870; E-Value: 0
Query Start/End: Original strand, 11 - 952
Target Start/End: Complemental strand, 24908020 - 24907083
Alignment:
Q  11 agcacagaccaaccatgaaacaagttctacaaatgctttccagacaagttcatcttaatgagaaggcattgactgagcctggaatatacagatggaatgc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24908020 agcacagaccaaccatgaaacaagttctacaaatgctttccagacaagttcatcttaatgagaaggcattgactgagcctggaatatacagatggaatgc 24907921  T
Q  111 ttccgcaaagacgagtggttctttgaatgagatttcatcgtcatctcaagtaatcaagcacaaaaaatatgaaaatcgatgtcaaacctctacgcaattt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24907920 ttccgcaaagacgagtggttctttgaatgagatttcatcgtcatctcaagtaatcaagcacaaaaaatatgaaaatcgatgtcaaacctctacgcaattt 24907821  T
Q  211 agcggtacagatattgtgacagagatgtttcctagatgatggttactatttacaaatgatgttggttccatgtttctggtatatgatgtatttatcattt 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  24907820 agcggtacagatattgtgacagagatgtttcctagatgatggttactatttacaaatgatgttggttccatgtttctggtatatgatgtatttatcgttt 24907721  T
Q  311 agttgttaggatacatgtggttccaaagggaatcatgggttaaattcattatgatgaatcttatttcttatgttgttggatactgcattaaataaatgtt 410  Q
    |||| ||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24907720 agttattaggatacatgtggttccaaagggaatcatg------attcattatgatgaatcttatttcttatattgttggatactgcattaaataaatgtt 24907627  T
Q  411 catatatttacttctgttattgcttattggttccacattccataaaaacattgatcagcaataacacgtttcaaagagccaaacccatgtttcaaagagc 510  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24907626 catatatttacttctgttattgcttattggttccacattccataaaaacattgatcagcaataacacgtttcaaagagccaaacccatgtttcaaagagc 24907527  T
Q  511 taacagttaaaggacctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagcttt 610  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24907526 taacagtgaaaggacctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagcttt 24907427  T
Q  611 cacgacaatgtgatttcttgctactgttttgaaaattacaatgccattcgagacatactaaaagatgcagtaacaaattataataaattattacttatca 710  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24907426 cacgacaatgtgatttcttgcaactgttttgaaaattacaacgccattcgagacatactaaaagatgcagtaacacattataataaattattacttatca 24907327  T
Q  711 aggaagatatc--aaatacgtaataacaatgagctcaaggaaaatgtggaaattcaaataaccaaccgaggtataaaatgaaagtaacgttacagaaggg 808  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24907326 aggaagatatcaaaaagacgtaataacaatgagctcaaggaaaatgtggaaattcaaataaccaaccgaggtataaaatgaaagtaacgttacataaggg 24907227  T
Q  809 tggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaatttttcttcttcttatattagaaa 908  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24907226 tggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaatttttcttcttcttatattagaaa 24907127  T
Q  909 cgtcgttacatgcgactctagattataaatgggacgtttaacct 952  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  24907126 cgtcgttacatgcaactctagattataaatgggacgtttaacct 24907083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 25 - 467
Target Start/End: Complemental strand, 24890303 - 24889863
Alignment:
Q  25 atgaaacaagttctacaaatgctttccagacaagttcatcttaatgagaaggcattgactgagcctggaatatacagatggaatgcttccgcaaagacga 124  Q
    |||||||| ||||||||||||||||||| ||||||||||  ||  ||||||||||||||||||| ||||||||||| || |||||| |||||||||||||    
T  24890303 atgaaacatgttctacaaatgctttccaaacaagttcat--tatggagaaggcattgactgagcatggaatatacaaatagaatgcctccgcaaagacga 24890206  T
Q  125 gtggttctttgaatgagatttcatcgtcatctcaagtaatcaagcacaaaaaatatgaaaatcgatgtcaaacctctacgcaatttagcggtacagatat 224  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  24890205 gtggttctttgaatgagatgtcatcgtcatctcaagtaatcaagcacaaaaaatatgaaaatcgacatcaaacctctacgcaatttagcggtacagatat 24890106  T
Q  225 tgtgacagagatgtttcctagatgatggttactatttacaaatgatgttggttccatgtttctggtatatgatgtatttatc-atttagttgttaggata 323  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||  || |||||| |||||||||||||  ||| ||||||||||||    
T  24890105 tgtgacagagatgtttcctagatgatggttactatttgcaaatgatgttgggttcatacttttggtatgtgatgtatttatcttttttgttgttaggata 24890006  T
Q  324 catgtggttccaaagggaatcatgggttaaattcattatgatgaatcttatttcttatgttgttggatactgcattaaataaatgttcatatatttactt 423  Q
    |||||||||||||||||||| ||||| |||||  ||||||||||||||||||||||||||||| || |||| |||| |||||||||||||||||||||||    
T  24890005 catgtggttccaaagggaataatggg-taaatatattatgatgaatcttatttcttatgttgtggggtactacattgaataaatgttcatatatttactt 24889907  T
Q  424 ctgttattgcttattggttccacattccataaaaacattgatca 467  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||    
T  24889906 ctgttattgcttattggttccactttccatacaaaaattgatca 24889863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 526 - 668
Target Start/End: Original strand, 2212658 - 2212799
Alignment:
Q  526 ctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagctttcacgacaatgtgatt 625  Q
    |||||||||||||||| |||||||| |||||||||| || ||| |||||||||||  ||||||| ||||| |||||||||||||||||| |||  |||||    
T  2212658 ctgtttggtttggcggtgggaaagccaaacccacgtctcgaagggcaactttcgtggaaattgagaagctagctttcctagctttcacggcaacatgatt 2212757  T
Q  626 tcttgctactgttttgaaaattacaatgccattcgagacatac 668  Q
    |||||| ||  ||||||||| ||||| ||||||| | ||||||    
T  2212758 tcttgccacaattttgaaaa-tacaacgccattctaaacatac 2212799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 809 - 884
Target Start/End: Complemental strand, 18264650 - 18264575
Alignment:
Q  809 tggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 884  Q
    ||||||| |||||||  | |||||||  |||||||||| |||| ||||||||||||| |||||||| | |||||||    
T  18264650 tggcaatatgatccatgagatccatatccatccaatccatccactacaaaatccatccaatccatccatcaaacaa 18264575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 816 - 889
Target Start/End: Complemental strand, 23869369 - 23869296
Alignment:
Q  816 gtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaattttt 889  Q
    ||||||||| |||||||| ||||||| ||   |||| ||||||||| |||  ||||||| ||||||||||||||    
T  23869369 gtgatccactaaatccattatcatccgattaatccactacaaaatctatcagatccatccaccaaacaattttt 23869296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 3e-69; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 761 - 952
Target Start/End: Original strand, 31302245 - 31302432
Alignment:
Q  761 ttcaaataaccaaccgaggtataaaatgaaagtaacgttacagaagggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaat 860  Q
    |||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  31302245 ttcaaataaccaactgaggtataaaattaaagtaacgttacataagggtggcaatgtgatccaccaaatccatatccatccaatccctcgagtacaaaat 31302344  T
Q  861 ccatctaatccatctaccaaacaatttttcttcttcttatattagaaacgtcgttacatgcgactctagattataaatgggacgtttaacct 952  Q
    ||||||||| ||||||||||||||||||||  |||||  ||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  31302345 ccatctaattcatctaccaaacaatttttc--cttct--tattagaaatgtcgttacatgcgactctagattataaatgggacgtttcacct 31302432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 524 - 631
Target Start/End: Complemental strand, 35154681 - 35154572
Alignment:
Q  524 acctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagctt--gctttcctagctttcacgacaatgt 621  Q
    ||||||||||||||||   || ||||| ||||  |||||||||||||||| ||||||  |||| || | ||||  |||||||||||||||||| |||  |    
T  35154681 acctgtttggtttggcaatggaaaagccaaacatacgtttcaaagagcaaatttcgtggaaatggagatgcttttgctttcctagctttcacggcaacat 35154582  T
Q  622 gatttcttgc 631  Q
    ||||||||||    
T  35154581 gatttcttgc 35154572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 806 - 874
Target Start/End: Original strand, 25244983 - 25245051
Alignment:
Q  806 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatc 874  Q
    |||||||||| |||||||  | |||||||  |||||||||| |||| ||||||||||||| ||||||||    
T  25244983 gggtggcaatatgatccatgagatccatatccatccaatccatccactacaaaatccatcaaatccatc 25245051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 806 - 884
Target Start/End: Original strand, 25275089 - 25275167
Alignment:
Q  806 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 884  Q
    |||||||||| |||||||  | || ||||  |||||||||| |||| ||||||||||||| |||||||| | |||||||    
T  25275089 gggtggcaatatgatccatgagattcatatccatccaatccatccactacaaaatccatccaatccatccatcaaacaa 25275167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 8e-33; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 525 - 645
Target Start/End: Complemental strand, 11026889 - 11026769
Alignment:
Q  525 cctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagctttcacgacaatgtgat 624  Q
    ||||||||||||||| | |||||||| |||||||||||||||||||| ||||||||  ||||||| |||||| ||||||||||||||||||||| |||||    
T  11026889 cctgtttggtttggcagtgggaaagccaaacccacgtttcaaagagcgactttcgtggaaattgagaagctttctttcctagctttcacgacaacgtgat 11026790  T
Q  625 ttcttgctactgttttgaaaa 645  Q
    |||||||  | ||||||||||    
T  11026789 ttcttgccgcagttttgaaaa 11026769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 524 - 677
Target Start/End: Original strand, 24403656 - 24403809
Alignment:
Q  524 acctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagctttcacgacaatgtga 623  Q
    |||||||||||||| ||| |||||||| |||||||| |||||||||||||||||| || ||||  |  | |||||||||||| |||||||||||| ||||    
T  24403656 acctgtttggtttgacggtgggaaagccaaacccacatttcaaagagcaactttcctagaaatgaagtaacttgctttcctaactttcacgacaacgtga 24403755  T
Q  624 tttcttgctactgttttgaaaattacaatgccattcgagacatactaaaagatg 677  Q
    ||| ||||  | |||||||||| || |||| ||||| | ||||||  |||||||    
T  24403756 ttttttgccgcagttttgaaaaatataatgtcattccaaacatacgtaaagatg 24403809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 808 - 884
Target Start/End: Complemental strand, 8933983 - 8933907
Alignment:
Q  808 gtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 884  Q
    |||||||| |||||||  | ||||||| ||||||||||| |||| ||||||||||||| |||||||| | |||||||    
T  8933983 gtggcaatatgatccatgagatccatattcatccaatccatccactacaaaatccatccaatccatccatcaaacaa 8933907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 806 - 884
Target Start/End: Original strand, 5708120 - 5708198
Alignment:
Q  806 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 884  Q
    |||||||||| |||||||  | |||||||  |||||||||  |||| ||||||||||||| |||||||| | |||||||    
T  5708120 gggtggcaatatgatccatgagatccatatccatccaatctatccactacaaaatccatccaatccatccatcaaacaa 5708198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 817 - 874
Target Start/End: Complemental strand, 9272953 - 9272896
Alignment:
Q  817 tgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatc 874  Q
    ||||||| || |||||||  |||||||||| |||| ||||||||||||| ||||||||    
T  9272953 tgatccatcagatccatatccatccaatccatccactacaaaatccatccaatccatc 9272896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 3e-23; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 527 - 631
Target Start/End: Complemental strand, 40350558 - 40350454
Alignment:
Q  527 tgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagctttcacgacaatgtgattt 626  Q
    ||||||||||||| | |||||||| |||||||||||||||||||||| |||| || |||| || ||||| ||||||||| |||||||||||| |||||||    
T  40350558 tgtttggtttggcagtgggaaagccaaacccacgtttcaaagagcaattttcatagaaatggagaagctcgctttcctaactttcacgacaacgtgattt 40350459  T
Q  627 cttgc 631  Q
     ||||    
T  40350458 tttgc 40350454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 523 - 659
Target Start/End: Complemental strand, 6217776 - 6217640
Alignment:
Q  523 gacctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagctttcacgacaatgtg 622  Q
    ||||| ||||||||||||| || ||||| ||||   ||| | |||||||||||||||| |||||  | ||||||  ||||||||||||||||  || |||    
T  6217776 gacctctttggtttggcggtggaaaagccaaactatcgtcttaaagagcaactttcgtgaaaatgaagaagcttagtttcctagctttcacggtaacgtg 6217677  T
Q  623 atttcttgctactgttttgaaaattacaatgccattc 659  Q
     ||||||||  | |||||||||| |||||||| ||||    
T  6217676 gtttcttgccgcagttttgaaaaatacaatgctattc 6217640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 807 - 889
Target Start/End: Original strand, 41189587 - 41189669
Alignment:
Q  807 ggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaattttt 889  Q
    ||||||||| |||||||  | |||||||  |||||||||| |||| ||||||||||||| |||||||| | ||||||| ||||    
T  41189587 ggtggcaatatgatccatgagatccatatccatccaatccatccactacaaaatccatccaatccatccatcaaacaaatttt 41189669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 1e-16; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 14988387 - 14988302
Alignment:
Q  526 ctgtttggttt-ggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagcttt 610  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||| |||||||| |||||  |||||||| |||||||||||||    
T  14988387 ctgtttggttttggcggtgggaaagccaaacccacgtttcaaggagctactttcgtgaaaatctaaaagcttactttcctagcttt 14988302  T

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Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 806 - 864
Target Start/End: Complemental strand, 9129568 - 9129510
Alignment:
Q  806 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccat 864  Q
    ||||||||| ||||||||||||||||||| ||||||| ||| |||  ||||||||||||    
T  9129568 gggtggcaaagtgatccaccaaatccatattcatccattccatccgctacaaaatccat 9129510  T

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Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 806 - 864
Target Start/End: Complemental strand, 9137675 - 9137617
Alignment:
Q  806 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccat 864  Q
    ||||||||| ||||||||||||||||||| ||||||| ||| |||  ||||||||||||    
T  9137675 gggtggcaaagtgatccaccaaatccatattcatccattccatccgctacaaaatccat 9137617  T

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Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 806 - 860
Target Start/End: Original strand, 34365439 - 34365493
Alignment:
Q  806 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaat 860  Q
    |||||||||| |||||||||||||| |||| |||||||||| | || ||||||||    
T  34365439 gggtggcaatttgatccaccaaatctataaccatccaatccattcactacaaaat 34365493  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 806 - 884
Target Start/End: Original strand, 26857966 - 26858044
Alignment:
Q  806 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 884  Q
    |||||||||| |||||||  | ||||||| ||||||||||| |||| ||||||||||||| |||||||||| |||||||    
T  26857966 gggtggcaatatgatccatgagatccatattcatccaatccatccactacaaaatccatccaatccatctatcaaacaa 26858044  T

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Target: chr8 (Bit Score: 38; Significance: 0.000000000006; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 527 - 596
Target Start/End: Complemental strand, 7561386 - 7561317
Alignment:
Q  527 tgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagctt 596  Q
    ||||||||||| | ||||||||||||||| ||||| | ||||||| |||||||| ||||| |||||||||    
T  7561386 tgtttggtttgaccgcgggaaagctaaactcacgtctaaaagagctactttcgtgaaaatagaaaagctt 7561317  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 523 - 610
Target Start/End: Original strand, 12768583 - 12768670
Alignment:
Q  523 gacctgtttggtttggcggcgggaaagctaaacccacgtttcaaagagcaactttcgtaaaaattgaaaagcttgctttcctagcttt 610  Q
    ||||||||||||||||||||||||||||  ||| |  | || || |||||||||||||  || | || ||||||||||||||||||||    
T  12768583 gacctgtttggtttggcggcgggaaagccgaactcgtggtttaaggagcaactttcgtggaagtagagaagcttgctttcctagcttt 12768670  T

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Target: scaffold0102 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 806 - 884
Target Start/End: Complemental strand, 14463 - 14385
Alignment:
Q  806 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 884  Q
    |||||||||| |||||||  | |||||||  |||||||||| |||| ||||||||||||| |||||||| | |||||||    
T  14463 gggtggcaatatgatccatgagatccatatccatccaatccatccactacaaaatccatccaatccatccatcaaacaa 14385  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000004; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 806 - 884
Target Start/End: Original strand, 17893953 - 17894031
Alignment:
Q  806 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 884  Q
    ||||||||||  |||||| ||||||||||  |||||||||| ||||  | || ||||||| ||||||||||||||||||    
T  17893953 gggtggcaataggatccatcaaatccatatacatccaatccatccaccataatatccatccaatccatctaccaaacaa 17894031  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 806 - 884
Target Start/End: Original strand, 43323718 - 43323796
Alignment:
Q  806 gggtggcaatgtgatccaccaaatccataatcatccaatccctccagtacaaaatccatctaatccatctaccaaacaa 884  Q
    |||||||||| |||||||  | ||| |||  |||||||||| |||| ||||||||||||| |||||||| | |||||||    
T  43323718 gggtggcaatatgatccatgagatctatatccatccaatccatccactacaaaatccatccaatccatccatcaaacaa 43323796  T

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