View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9811_low_10 (Length: 248)

Name: NF9811_low_10
Description: NF9811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9811_low_10
NF9811_low_10
[»] chr7 (53 HSPs)
chr7 (18-248)||(19645010-19645241)
chr7 (79-124)||(11373846-11373891)
chr7 (77-123)||(21748082-21748128)
chr7 (72-126)||(23826285-23826339)
chr7 (72-129)||(21939337-21939394)
chr7 (72-124)||(4049984-4050036)
chr7 (72-124)||(14247293-14247345)
chr7 (72-124)||(17876420-17876472)
chr7 (72-124)||(28350115-28350167)
chr7 (72-123)||(20505272-20505323)
chr7 (74-132)||(6792061-6792119)
chr7 (72-126)||(18186436-18186490)
chr7 (74-131)||(36580265-36580323)
chr7 (76-121)||(8074142-8074187)
chr7 (75-124)||(15348224-15348273)
chr7 (75-120)||(20185181-20185226)
chr7 (72-125)||(45697485-45697538)
chr7 (76-120)||(23746161-23746205)
chr7 (72-124)||(28785755-28785807)
chr7 (76-128)||(35793370-35793422)
chr7 (75-123)||(44312745-44312793)
chr7 (74-128)||(3318313-3318367)
chr7 (74-124)||(3382085-3382135)
chr7 (76-130)||(20184909-20184963)
chr7 (74-128)||(45718136-45718190)
chr7 (72-125)||(17931989-17932042)
chr7 (75-124)||(18504505-18504554)
chr7 (72-129)||(28786020-28786077)
chr7 (75-124)||(29834175-29834224)
chr7 (76-125)||(41243642-41243691)
chr7 (74-126)||(35250116-35250168)
chr7 (72-127)||(327441-327496)
chr7 (75-130)||(6726251-6726305)
chr7 (72-123)||(6726522-6726573)
chr7 (72-119)||(21505880-21505927)
chr7 (72-123)||(36903530-36903581)
chr7 (72-122)||(3247434-3247484)
chr7 (74-120)||(9500167-9500213)
chr7 (75-129)||(18186718-18186772)
chr7 (72-126)||(20505095-20505149)
chr7 (73-123)||(41243908-41243958)
chr7 (73-123)||(48059210-48059260)
chr7 (72-125)||(282864-282917)
chr7 (72-133)||(4049696-4049757)
chr7 (72-125)||(15107252-15107305)
chr7 (72-133)||(21505605-21505666)
chr7 (74-127)||(25780078-25780131)
chr7 (18-55)||(35250327-35250364)
chr7 (74-127)||(46199049-46199102)
chr7 (76-121)||(47909696-47909741)
chr7 (75-111)||(5172791-5172827)
chr7 (72-128)||(29933536-29933592)
chr7 (76-127)||(42256578-42256630)
[»] chr2 (43 HSPs)
chr2 (72-127)||(14489473-14489528)
chr2 (78-123)||(31827800-31827845)
chr2 (71-124)||(34679096-34679149)
chr2 (72-120)||(37431800-37431848)
chr2 (75-123)||(37803398-37803446)
chr2 (72-123)||(16043288-16043339)
chr2 (72-123)||(18709247-18709298)
chr2 (72-123)||(34679353-34679404)
chr2 (76-127)||(34761127-34761178)
chr2 (75-125)||(6592722-6592772)
chr2 (74-132)||(19895604-19895662)
chr2 (72-125)||(5362173-5362226)
chr2 (72-125)||(19206140-19206193)
chr2 (76-125)||(32969794-32969843)
chr2 (72-120)||(2609081-2609129)
chr2 (72-124)||(43028793-43028845)
chr2 (73-120)||(6510263-6510310)
chr2 (76-127)||(6592999-6593050)
chr2 (75-126)||(12948886-12948937)
chr2 (74-124)||(19399440-19399490)
chr2 (72-126)||(25375136-25375190)
chr2 (72-125)||(14816060-14816113)
chr2 (75-123)||(15023104-15023152)
chr2 (72-124)||(21358368-21358420)
chr2 (18-57)||(6592941-6592980)
chr2 (72-127)||(20650366-20650421)
chr2 (76-123)||(36176981-36177028)
chr2 (72-123)||(39918434-39918485)
chr2 (74-124)||(14943808-14943858)
chr2 (73-123)||(15022838-15022888)
chr2 (72-122)||(17850497-17850547)
chr2 (74-124)||(36715559-36715609)
chr2 (74-124)||(44618002-44618052)
chr2 (72-121)||(4925706-4925755)
chr2 (72-125)||(5470598-5470651)
chr2 (75-112)||(18224997-18225033)
chr2 (75-124)||(25333758-25333807)
chr2 (79-120)||(35718925-35718966)
chr2 (72-124)||(25379-25431)
chr2 (76-120)||(5470333-5470377)
chr2 (72-128)||(23993922-23993978)
chr2 (72-128)||(31025870-31025926)
chr2 (72-124)||(36177353-36177405)
[»] chr3 (45 HSPs)
chr3 (74-132)||(48348246-48348304)
chr3 (76-125)||(14349375-14349424)
chr3 (18-124)||(28712669-28712776)
chr3 (72-128)||(28944228-28944284)
chr3 (75-123)||(33329611-33329659)
chr3 (71-123)||(53184779-53184831)
chr3 (72-127)||(4474330-4474385)
chr3 (73-124)||(17773169-17773220)
chr3 (73-124)||(19074470-19074521)
chr3 (74-124)||(20432189-20432239)
chr3 (75-125)||(28204478-28204528)
chr3 (73-127)||(36677520-36677574)
chr3 (73-127)||(36687602-36687656)
chr3 (77-122)||(27178141-27178186)
chr3 (75-132)||(38958109-38958166)
chr3 (75-123)||(14856546-14856594)
chr3 (75-127)||(46226953-46227005)
chr3 (72-127)||(51315747-51315802)
chr3 (75-125)||(3193047-3193097)
chr3 (74-124)||(14340732-14340782)
chr3 (72-122)||(47189599-47189649)
chr3 (72-125)||(86827-86880)
chr3 (75-124)||(54718993-54719042)
chr3 (72-120)||(43747282-43747330)
chr3 (76-123)||(1814550-1814597)
chr3 (76-122)||(19404399-19404445)
chr3 (72-129)||(35359247-35359304)
chr3 (72-125)||(44433329-44433382)
chr3 (72-125)||(53255287-53255340)
chr3 (72-124)||(12759502-12759554)
chr3 (76-120)||(25843604-25843648)
chr3 (72-120)||(43586572-43586619)
chr3 (72-120)||(44586049-44586097)
chr3 (73-124)||(25902617-25902668)
chr3 (74-124)||(1807437-1807487)
chr3 (75-133)||(54476033-54476091)
chr3 (72-125)||(578674-578727)
chr3 (74-127)||(3354950-3355003)
chr3 (73-126)||(44433052-44433104)
chr3 (75-124)||(50420887-50420936)
chr3 (74-122)||(1814818-1814866)
chr3 (18-58)||(7218219-7218259)
chr3 (72-124)||(38957844-38957896)
chr3 (18-58)||(51315561-51315601)
chr3 (72-124)||(54464427-54464478)
[»] chr1 (37 HSPs)
chr1 (72-121)||(18632602-18632651)
chr1 (72-124)||(39642199-39642251)
chr1 (74-127)||(23220826-23220879)
chr1 (76-126)||(25486479-25486529)
chr1 (75-132)||(25085390-25085447)
chr1 (18-124)||(46573034-46573142)
chr1 (72-124)||(3377500-3377552)
chr1 (78-120)||(16874511-16874553)
chr1 (74-123)||(14978797-14978846)
chr1 (72-121)||(23891662-23891711)
chr1 (75-120)||(46880741-46880786)
chr1 (72-124)||(51250484-51250536)
chr1 (72-123)||(14979063-14979114)
chr1 (73-120)||(50401635-50401682)
chr1 (72-126)||(18216683-18216737)
chr1 (74-120)||(46912193-46912239)
chr1 (75-132)||(7060618-7060675)
chr1 (74-127)||(8009980-8010033)
chr1 (72-125)||(12960844-12960897)
chr1 (75-124)||(17760957-17761006)
chr1 (72-128)||(5287245-5287301)
chr1 (72-120)||(6320844-6320891)
chr1 (75-127)||(10532211-10532263)
chr1 (72-124)||(50226391-50226443)
chr1 (72-123)||(3377774-3377825)
chr1 (72-126)||(27864420-27864474)
chr1 (75-133)||(32295219-32295277)
chr1 (72-122)||(37008218-37008268)
chr1 (72-126)||(41997637-41997691)
chr1 (75-116)||(51251391-51251431)
chr1 (72-120)||(8009732-8009780)
chr1 (72-124)||(12075276-12075328)
chr1 (72-124)||(17760681-17760733)
chr1 (75-127)||(41915788-41915840)
chr1 (18-58)||(45739143-45739183)
chr1 (72-120)||(45739196-45739244)
chr1 (75-123)||(46895437-46895485)
[»] chr5 (40 HSPs)
chr5 (72-127)||(2974897-2974952)
chr5 (72-134)||(27904746-27904808)
chr5 (75-120)||(3999089-3999134)
chr5 (74-126)||(35166557-35166610)
chr5 (73-122)||(39574240-39574289)
chr5 (75-120)||(43098031-43098076)
chr5 (72-124)||(20512462-20512514)
chr5 (72-127)||(24779537-24779592)
chr5 (72-126)||(12406038-12406092)
chr5 (72-122)||(32391720-32391770)
chr5 (75-120)||(3333695-3333740)
chr5 (76-121)||(25910992-25911037)
chr5 (72-121)||(37897980-37898029)
chr5 (72-123)||(3333964-3334015)
chr5 (76-127)||(20629732-20629783)
chr5 (74-133)||(36798441-36798500)
chr5 (72-126)||(6464338-6464392)
chr5 (72-129)||(12406303-12406360)
chr5 (18-124)||(24405704-24405812)
chr5 (18-124)||(40276017-40276125)
chr5 (72-124)||(18403253-18403304)
chr5 (18-58)||(19340827-19340867)
chr5 (72-120)||(25364088-25364136)
chr5 (18-58)||(30603679-30603719)
chr5 (72-131)||(6130247-6130306)
chr5 (75-122)||(35877545-35877592)
chr5 (75-125)||(24405488-24405538)
chr5 (73-103)||(26702677-26702707)
chr5 (73-103)||(26972410-26972440)
chr5 (75-125)||(42585984-42586034)
chr5 (75-120)||(19340767-19340812)
chr5 (74-127)||(26562986-26563039)
chr5 (72-125)||(34319958-34320010)
chr5 (75-123)||(586678-586726)
chr5 (95-127)||(6463966-6463998)
chr5 (76-124)||(16132997-16133045)
chr5 (74-122)||(22300873-22300921)
chr5 (72-124)||(36798169-36798221)
chr5 (75-123)||(40132904-40132952)
chr5 (72-120)||(40133142-40133190)
[»] chr4 (62 HSPs)
chr4 (72-123)||(50769624-50769675)
chr4 (74-132)||(35393934-35393992)
chr4 (73-125)||(11824462-11824514)
chr4 (72-124)||(35383764-35383816)
chr4 (72-124)||(43074615-43074667)
chr4 (72-123)||(2653953-2654004)
chr4 (72-134)||(53312275-53312337)
chr4 (72-120)||(14449276-14449324)
chr4 (77-128)||(54983843-54983894)
chr4 (72-122)||(21957730-21957780)
chr4 (72-122)||(27978959-27979009)
chr4 (74-124)||(51371728-51371778)
chr4 (72-121)||(1420537-1420586)
chr4 (75-128)||(51362806-51362859)
chr4 (75-124)||(53312551-53312600)
chr4 (72-124)||(2016790-2016842)
chr4 (73-125)||(6614845-6614897)
chr4 (72-124)||(23759560-23759612)
chr4 (72-120)||(37831595-37831643)
chr4 (72-127)||(1571669-1571724)
chr4 (72-123)||(14449548-14449599)
chr4 (76-127)||(16292534-16292585)
chr4 (75-126)||(53924744-53924795)
chr4 (73-123)||(2181388-2181438)
chr4 (74-124)||(29697786-29697836)
chr4 (72-122)||(35615315-35615365)
chr4 (75-120)||(3658190-3658235)
chr4 (74-123)||(6207176-6207225)
chr4 (75-124)||(20112139-20112188)
chr4 (74-123)||(53831152-53831201)
chr4 (76-120)||(4411493-4411537)
chr4 (76-120)||(8965525-8965569)
chr4 (72-124)||(19909172-19909224)
chr4 (72-124)||(25909486-25909538)
chr4 (73-125)||(30064364-30064416)
chr4 (72-127)||(2017051-2017106)
chr4 (72-127)||(4796301-4796356)
chr4 (74-121)||(35615433-35615479)
chr4 (76-127)||(53578922-53578973)
chr4 (74-128)||(1420809-1420863)
chr4 (72-126)||(2836896-2836950)
chr4 (76-134)||(21322696-21322754)
chr4 (75-121)||(21871650-21871696)
chr4 (75-121)||(21927511-21927557)
chr4 (74-124)||(41148565-41148615)
chr4 (72-125)||(4796034-4796087)
chr4 (28-57)||(12719516-12719545)
chr4 (72-121)||(14016722-14016771)
chr4 (74-123)||(30064002-30064051)
chr4 (75-132)||(43074832-43074889)
chr4 (72-125)||(44356660-44356712)
chr4 (72-121)||(49185822-49185870)
chr4 (74-123)||(52463052-52463101)
chr4 (72-124)||(1186657-1186709)
chr4 (72-124)||(3369846-3369898)
chr4 (72-120)||(5548016-5548064)
chr4 (72-124)||(6033906-6033958)
chr4 (72-128)||(8070623-8070679)
chr4 (76-132)||(10059966-10060022)
chr4 (75-119)||(14060760-14060804)
chr4 (76-124)||(21451458-21451506)
chr4 (72-120)||(51362539-51362587)
[»] chr6 (28 HSPs)
chr6 (18-132)||(28011333-28011447)
chr6 (75-127)||(238926-238978)
chr6 (72-124)||(12766477-12766529)
chr6 (73-123)||(33401317-33401367)
chr6 (72-125)||(3579593-3579646)
chr6 (75-123)||(5003089-5003137)
chr6 (74-127)||(10727186-10727239)
chr6 (72-125)||(30349619-30349672)
chr6 (72-120)||(1377469-1377517)
chr6 (72-120)||(1385217-1385265)
chr6 (72-132)||(10727457-10727517)
chr6 (72-116)||(18030944-18030988)
chr6 (72-121)||(17248905-17248953)
chr6 (72-125)||(33399784-33399836)
chr6 (74-122)||(2840790-2840838)
chr6 (74-125)||(5607014-5607066)
chr6 (75-123)||(6036644-6036692)
chr6 (77-133)||(26601727-26601783)
chr6 (20-113)||(32143460-32143555)
chr6 (18-57)||(266189-266228)
chr6 (72-127)||(2203183-2203238)
chr6 (75-124)||(30349348-30349397)
chr6 (18-54)||(2203359-2203395)
chr6 (76-124)||(12798726-12798774)
chr6 (75-123)||(17248636-17248684)
chr6 (75-119)||(20474970-20475014)
chr6 (77-125)||(26311394-26311442)
chr6 (75-123)||(30369784-30369832)
[»] chr8 (40 HSPs)
chr8 (72-124)||(17070906-17070958)
chr8 (72-124)||(17577314-17577366)
chr8 (72-123)||(9762462-9762513)
chr8 (75-120)||(37263361-37263406)
chr8 (72-127)||(39889768-39889823)
chr8 (72-118)||(22192307-22192353)
chr8 (72-122)||(33298596-33298646)
chr8 (75-124)||(41487199-41487248)
chr8 (75-120)||(45456969-45457014)
chr8 (76-124)||(521709-521757)
chr8 (72-128)||(6807168-6807224)
chr8 (75-123)||(20228231-20228279)
chr8 (75-127)||(20853374-20853426)
chr8 (72-120)||(25896993-25897041)
chr8 (72-124)||(37813161-37813213)
chr8 (74-125)||(16982624-16982675)
chr8 (74-125)||(23702121-23702172)
chr8 (75-121)||(9499223-9499269)
chr8 (72-125)||(756120-756173)
chr8 (72-125)||(28349570-28349623)
chr8 (70-127)||(29657959-29658016)
chr8 (75-124)||(35213030-35213079)
chr8 (72-128)||(18092906-18092962)
chr8 (72-120)||(27545618-27545666)
chr8 (75-126)||(26824098-26824148)
chr8 (77-128)||(27545339-27545390)
chr8 (76-127)||(41487476-41487527)
chr8 (76-131)||(41602878-41602933)
chr8 (76-122)||(521525-521571)
chr8 (76-126)||(25144207-25144257)
chr8 (75-128)||(9498904-9498957)
chr8 (72-113)||(14880597-14880638)
chr8 (72-129)||(17512091-17512148)
chr8 (75-128)||(32071278-32071330)
chr8 (75-128)||(36688263-36688316)
chr8 (72-124)||(755902-755954)
chr8 (72-124)||(14170421-14170473)
chr8 (76-124)||(23702401-23702449)
chr8 (18-58)||(45177415-45177455)
chr8 (75-127)||(45515929-45515981)
[»] scaffold0062 (1 HSPs)
scaffold0062 (76-124)||(46075-46123)
[»] scaffold0166 (1 HSPs)
scaffold0166 (72-127)||(21920-21975)
[»] scaffold0248 (1 HSPs)
scaffold0248 (72-122)||(673-723)
[»] scaffold1458 (1 HSPs)
scaffold1458 (72-125)||(1469-1522)
[»] scaffold0515 (1 HSPs)
scaffold0515 (72-125)||(3637-3690)
[»] scaffold0306 (1 HSPs)
scaffold0306 (72-125)||(3637-3690)
[»] scaffold0809 (1 HSPs)
scaffold0809 (76-127)||(2748-2799)
[»] scaffold0417 (1 HSPs)
scaffold0417 (75-125)||(9603-9653)
[»] scaffold0194 (1 HSPs)
scaffold0194 (74-116)||(24900-24942)
[»] scaffold0025 (2 HSPs)
scaffold0025 (77-125)||(19038-19086)
scaffold0025 (72-120)||(19604-19652)
[»] scaffold0725 (1 HSPs)
scaffold0725 (76-127)||(6698-6749)
[»] scaffold0250 (1 HSPs)
scaffold0250 (72-122)||(3573-3623)
[»] scaffold0328 (1 HSPs)
scaffold0328 (72-136)||(9681-9742)
[»] scaffold0372 (1 HSPs)
scaffold0372 (76-124)||(123-171)
[»] scaffold0137 (1 HSPs)
scaffold0137 (74-110)||(20183-20219)


Alignment Details
Target: chr7 (Bit Score: 136; Significance: 5e-71; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 19645010 - 19645241
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaattttgtaannnnnnnncttatggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctat 117  Q
    |||||| ||||||||||||||||||| ||||||||| ||||         |   |||||||||||||||||||| ||||||| |||||||||| ||||||    
T  19645010 aaaactgctacagttgcaaaacttagagggcaatttggtaatttttttcttaggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaattgctat 19645109  T
Q  118 taagcctaaat-aaaaatgacgatctatagattcaattccatatgtagcagtgctagcaacttccaacatctatccaatgtgggcaacatttatagcaag 216  Q
    ||| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  19645110 taaacctaaattaaaaaagacgatctatagattcaattccatatgtagtagtgctagcaacttccaacatccatcgaatgtgggcaacatttatagcaag 19645209  T
Q  217 ctgattcaattccagttgtgctcctctgtgct 248  Q
    ||||||||||||||||||||||||||| ||||    
T  19645210 ctgattcaattccagttgtgctcctctatgct 19645241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 11373891 - 11373846
Alignment:
Q  79 atcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  11373891 atcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 11373846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 21748082 - 21748128
Alignment:
Q  77 aaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  21748082 aaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcc 21748128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 23826285 - 23826339
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||||||||||    
T  23826285 ggccaaaatcgcaacttcgtgaaagttaggggacaaaaactgctattaagcctaa 23826339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 21939337 - 21939394
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaata 129  Q
    |||||||||||||||||||| | | ||||||||| |||||||||||||||||||||||    
T  21939337 ggccaaaatcgcaacttcgtgatacttagggggccaaaactgctattaagcctaaata 21939394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 4049984 - 4050036
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  4049984 ggccaaaatcacaacttcgtgaaagttaaggggcgaaaactgctattaagcct 4050036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 14247345 - 14247293
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  14247345 ggccaaaatcacaacttcgtgaaagttaggtggcgaaaactgctattaagcct 14247293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 17876420 - 17876472
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  17876420 ggccaaaatcgtaacttcgtgaaagttagggggtgaaaactgctattaagcct 17876472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 28350167 - 28350115
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  28350167 ggccaaaatcgtaacttcgtgaaagttagggggctaaaactgctattaagcct 28350115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 20505272 - 20505323
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  20505272 ggccaaaatcgcaacttcataaaagctagggggtgaaaactgctattaagcc 20505323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 6792061 - 6792119
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaa 132  Q
    ||||||||||||||| | |||||||||||||| |||||||||||||| |||||| ||||    
T  6792061 ccaaaatcgcaactttggaaaagttagggggctaaaactgctattaaacctaaaaaaaa 6792119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 18186490 - 18186436
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||||| |||||    
T  18186490 ggccaaaatcgcaacttcataaaagttagggggcgaaaaccactattaaacctaa 18186436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 36580323 - 36580265
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc-taaataaa 131  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  36580323 ccaaaatcacaacttcgtgaaagttaggggccgaaaactgctattaagccataaataaa 36580265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 8074142 - 8074187
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 121  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||    
T  8074142 aaaatcgtaacttcgtgaaagttagggggcgaaaactgctattaag 8074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 15348224 - 15348273
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  15348224 caaaatcgcaacttcgtgaaagttagggggtgaatactgctattaagcct 15348273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 20185181 - 20185226
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||    
T  20185181 caaaatcgcaacttcgtgaaagttagggggcgaaaactactattaa 20185226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 45697538 - 45697485
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    |||||||||||||||||||  ||||||||||| ||||||||| |||||||||||    
T  45697538 ggccaaaatcgcaacttcgagaaagttaggggacgaaaactgttattaagccta 45697485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 23746161 - 23746205
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  23746161 aaaatcgcaacttcgtaaaagttaggggacgaaagctgctattaa 23746205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 28785807 - 28785755
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||| |||||||| |||||||||||||| |||||||||||| ||||    
T  28785807 ggccaaaatcgtaacttcgtgaaagttagggggcggaaactgctattatgcct 28785755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 35793422 - 35793370
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||    
T  35793422 aaaatcgcaacttcctaaaatttagggggccaaaactgctattaagccaaaat 35793370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 44312793 - 44312745
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  44312793 caaaatcgcaacttcgtaaaagttaggagacgaaaactgttattaagcc 44312745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 3318367 - 3318313
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    ||||||||||||||| | |||||||| ||||| |||||| |||||||||||||||    
T  3318367 ccaaaatcgcaactttggaaaagttaaggggctaaaactcctattaagcctaaat 3318313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 3382085 - 3382135
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||| ||||||||||||||||||||||| ||||||| | ||||||||    
T  3382085 ccaaaatcacaacttcgtaaaagttagggggcaaaaactgatgttaagcct 3382135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 20184963 - 20184909
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataa 130  Q
    ||||||||||||| | ||||||||||| || ||||||| ||||||||||||||||    
T  20184963 aaaatcgcaactttggaaaagttagggagctaaaactgttattaagcctaaataa 20184909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 45718136 - 45718190
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    ||||| |||||||||||| ||||||||| ||| |||| |||||||||||||||||    
T  45718136 ccaaattcgcaacttcgtgaaagttaggaggcaaaaattgctattaagcctaaat 45718190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 17931989 - 17932042
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||| | |||||| ||| ||| |||||||||||||||||||    
T  17931989 ggccaaaatcgcaactttggaaaagtgaggaggctaaaactgctattaagccta 17932042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 18504505 - 18504554
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||| | ||||||||||| ||||||||| ||||||||||    
T  18504505 caaaatcgcaacttcatgaaagttaggggacgaaaactgttattaagcct 18504554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 28786020 - 28786077
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaata 129  Q
    |||||||||| |||||| | |||||||| ||||  |||||||||||||||||||||||    
T  28786020 ggccaaaatcacaactttggaaaagttatggggttaaaactgctattaagcctaaata 28786077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 29834224 - 29834175
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||||||| ||||| | |||||||||| |||||||||||    
T  29834224 caaaatcgcaacttcgtaacagttaagaggcgaaaactactattaagcct 29834175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 41243691 - 41243642
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||| ||||||| | |||||||||||||| |||||||||||||||||||    
T  41243691 aaaattgcaactttggaaaagttagggggctaaaactgctattaagccta 41243642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 35250168 - 35250116
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    ||||||||||||||| | ||||||||| |||| |||||| |||||||||||||    
T  35250168 ccaaaatcgcaactttggaaaagttagagggctaaaactactattaagcctaa 35250116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 327441 - 327496
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||||||| | |||  |||||||| | |||||||||||||||||||    
T  327441 ggccaaaatcgcaacttcttgaaacatagggggccacaactgctattaagcctaaa 327496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 6726305 - 6726251
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataa 130  Q
    ||||||||||||||||| |||| |||||| ||||||||| ||||||||| ||||||    
T  6726305 caaaatcgcaacttcgtgaaaggtagggg-cgaaaactgttattaagccaaaataa 6726251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 6726522 - 6726573
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||| ||||||||||||||| ||||||||||| | ||||| |||||||||||    
T  6726522 ggcctaaatcgcaacttcgtgaaagttaggggacaaaaacagctattaagcc 6726573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 21505880 - 21505927
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctatta 119  Q
    ||||||||||||||||| | |||||||||||| | |||||||||||||    
T  21505880 ggccaaaatcgcaactttgaaaaagttaggggactaaaactgctatta 21505927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 36903530 - 36903581
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||| | | |||||||||||||  |||||||||||||||||    
T  36903530 ggccaaaatcgcaacattgaaaaagttagggggttaaaactgctattaagcc 36903581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 3247434 - 3247484
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    |||||||||| ||||||||| ||||||||||| |||||| || ||||||||    
T  3247434 ggccaaaatcacaacttcgtgaaagttaggggacgaaaattgttattaagc 3247484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 9500167 - 9500213
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||||||||| | ||| ||||||||| ||||||||||||||    
T  9500167 ccaaaatcgcaacttcttgaaacttagggggctaaaactgctattaa 9500213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 18186718 - 18186772
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaata 129  Q
    |||||||| ||||| | |||||||||||||| |||||||||||||| | ||||||    
T  18186718 caaaatcgtaactttggaaaagttagggggctaaaactgctattaaacttaaata 18186772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 20505149 - 20505095
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    ||||||| ||||||||| |  ||||||||||||| |||||||||||||| |||||    
T  20505149 ggccaaagtcgcaactttgagaaagttagggggctaaaactgctattaaacctaa 20505095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 41243908 - 41243958
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||||| ||||| || ||||||||||  |||||||||||||||||||    
T  41243908 gccaaaatcgtaactttgtgaaagttagggaccgaaaactgctattaagcc 41243958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 48059210 - 48059260
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||| ||||||| ||||| ||||||| | |||||||||||||||||    
T  48059210 gccaaaatcacaacttcttaaaacttaggggcctaaaactgctattaagcc 48059260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 282864 - 282917
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    |||||||||||||||||| | |||  |||| ||| |||||||||||||||||||    
T  282864 ggccaaaatcgcaacttcttgaaacataggaggccaaaactgctattaagccta 282917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 4049757 - 4049696
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaaa 133  Q
    |||||||||||||||||   ||||||||| |||| ||||||||| |||| ||||||| ||||    
T  4049757 ggccaaaatcgcaactttagaaaagttagtgggctaaaactgctgttaaacctaaattaaaa 4049696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 15107252 - 15107305
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||| ||||| | |||| ||||||||  |||||||||||||||||||    
T  15107252 ggccaaaatcgtaactttggaaaaattaggggggtaaaactgctattaagccta 15107305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 21505666 - 21505605
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaaa 133  Q
    |||| |||| |||||||||| ||||||| ||| ||||| |||||||||||||| || |||||    
T  21505666 ggcccaaattgcaacttcgtgaaagttaagggacgaaagctgctattaagccttaaaaaaaa 21505605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 25780078 - 25780131
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||| ||||||||||||||  | | || ||||||||||||||||||    
T  25780078 ccaaaatcgcaatttcgtaaaagttagaagaccaacactgctattaagcctaaa 25780131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 35250327 - 35250364
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaattttg 55  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  35250327 aaaactgctacagttgcaaaacttagggggcagttttg 35250364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 46199102 - 46199049
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||||| |||||  ||| |||  |||||||||||||||||||||    
T  46199102 ccaaaatcgcaacttcttaaaatatagaggggcaaaactgctattaagcctaaa 46199049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 47909741 - 47909696
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 121  Q
    ||||||||||||| |  ||||||||||||| |||||||||||||||    
T  47909741 aaaatcgcaactttgggaaagttagggggctaaaactgctattaag 47909696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 5172791 - 5172827
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaac 111  Q
    |||||||||||||||||||||||||||| | ||||||    
T  5172791 caaaatcgcaacttcgtaaaagttagggagtgaaaac 5172827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 29933536 - 29933592
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    |||||||||||||||||| |||||  ||| |||  ||||||| ||||||||||||||    
T  29933536 ggccaaaatcgcaacttcttaaaacatagagggtcaaaactgttattaagcctaaat 29933592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 42256630 - 42256578
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcg-aaaactgctattaagcctaaa 127  Q
    ||||||||||||| | |||||||||||||   |||||||||||||||||||||    
T  42256630 aaaatcgcaactttgaaaaagttaggggggttaaaactgctattaagcctaaa 42256578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 14489473 - 14489528
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14489473 ggccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcctaaa 14489528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 31827800 - 31827845
Alignment:
Q  78 aatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  31827800 aatcgcaacttcgtaaaagttagggggcgaaaattgctattaagcc 31827845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 34679149 - 34679096
Alignment:
Q  71 tggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||||||||    
T  34679149 tggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcct 34679096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 37431800 - 37431848
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37431800 ggccaaaatcgcaacttcgtggaagttagggggcgaaaactgctattaa 37431848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 37803398 - 37803446
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||    
T  37803398 caaaatcgcaacttcgtaaaagttagggggcgaaaattgttattaagcc 37803446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 16043288 - 16043339
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||    
T  16043288 ggccaaaatcgtaacttcgtgaaagttagggggcgaaaactgctgttaagcc 16043339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 18709298 - 18709247
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  18709298 ggccaaaatcgaaacttcgtgaaagttaggggacgaaaactgctattaagcc 18709247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 34679353 - 34679404
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  34679353 ggccaaaatcacaacttcgtgaaagttagggggcaaaaactgctattaagcc 34679404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 34761127 - 34761178
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  34761127 aaaatcgcaacttcgtgaaagttaggggacgaaaactgctattaaacctaaa 34761178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 6592772 - 6592722
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    |||||||||||||| | |||||||||||||| |||||||||||||||||||    
T  6592772 caaaatcgcaactttggaaaagttagggggctaaaactgctattaagccta 6592722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 19895662 - 19895604
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaa 132  Q
    |||||||||||| ||||||||||||||||| ||||||||| ||||||||| ||| ||||    
T  19895662 ccaaaatcgcaatttcgtaaaagttaggggacgaaaactgatattaagccaaaaaaaaa 19895604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 5362226 - 5362173
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||| || |||||||||||||||||| | ||||||||||||    
T  5362226 ggccaaaatcgcaactttgtgaaagttagggggcgaaaattactattaagccta 5362173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 19206193 - 19206140
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||| || ||| |||||||||||||| ||||||||||||||    
T  19206193 ggccaaaatcgcaactttgtgaaaattagggggcgaaaattgctattaagccta 19206140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 32969794 - 32969843
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  32969794 aaaatcgaaactccgtgaaagttagggggcgaaaactgctattaagccta 32969843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 2609129 - 2609081
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  2609129 ggccaaaatcaaaacttcgtaaaagttagggggcgaaaactactattaa 2609081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 43028845 - 43028793
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||||| | | |||||||||||| ||||||||||||||||||    
T  43028845 ggccaaaatcgcaactttggagaagttagggggctaaaactgctattaagcct 43028793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 6510263 - 6510310
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||||| | |||||||| |||||||||||||||||||    
T  6510263 gccaaaatcgcaacttcatgaaagttagagggcgaaaactgctattaa 6510310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 6592999 - 6593050
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||||| ||||||||| |||||||||| || |||||||||||    
T  6592999 aaaatcgcaacttcgtgaaagttaggtggcgaaaactactgttaagcctaaa 6593050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 12948937 - 12948886
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    ||||||||||||||| ||||| ||||||||| |||||||||||||| |||||    
T  12948937 caaaatcgcaacttcttaaaatttagggggctaaaactgctattaaacctaa 12948886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 19399440 - 19399490
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||| |||||| | |||||||||||||| ||||||||||||||||||    
T  19399440 ccaaaatcacaactttgaaaaagttagggggctaaaactgctattaagcct 19399490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 25375136 - 25375190
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    ||||||||||||||| | | |||| ||||||||| ||||||||||||||||||||    
T  25375136 ggccaaaatcgcaacattgaaaaaattagggggctaaaactgctattaagcctaa 25375190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 14816060 - 14816113
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    |||||||||||||||||| | |||  |||||||| |||||||||||||||||||    
T  14816060 ggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagccta 14816113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 15023104 - 15023152
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||| ||||||| | ||||||||||||| |||||||||||||||||    
T  15023104 caaaatcacaacttcttgaaagttagggggccaaaactgctattaagcc 15023152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 21358368 - 21358420
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||| |||||| |  ||||||||||||| ||||||||||||||||||    
T  21358368 ggccaaaatcacaactttgagaaagttagggggcaaaaactgctattaagcct 21358420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 6592941 - 6592980
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaattttgta 57  Q
    |||||| ||||||||||||||||||||||||| |||||||    
T  6592941 aaaactgctacagttgcaaaacttagggggcagttttgta 6592980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 20650421 - 20650366
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||| ||||||| | ||| ||||||||| ||||||||||| |||||||||    
T  20650421 ggccaaaatctcaacttcttgaaacttagggggctaaaactgctatgaagcctaaa 20650366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 36177028 - 36176981
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||||||||||| ||| |||| |||| |||||||||||||||||    
T  36177028 aaaatcgcaacttcgtgaaacttagagggctaaaactgctattaagcc 36176981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 39918485 - 39918434
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||||| |  ||||||||||||| |||||| ||||||||||    
T  39918485 ggccaaaatcgcaactttgagaaagttagggggctaaaactactattaagcc 39918434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 14943808 - 14943858
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||| |||||| | |||||||| ||||| ||||||||||||||||||    
T  14943808 ccaaaatcacaactttggaaaagttaaggggctaaaactgctattaagcct 14943858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 15022888 - 15022838
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||| ||||||   |||||||||||||| |||||||||||||||||    
T  15022888 gccaaaatcacaactttcgaaaagttagggggctaaaactgctattaagcc 15022838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 17850497 - 17850547
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    |||||||||||||||||| |||||  |||||||| |||||| |||||||||    
T  17850497 ggccaaaatcgcaacttcttaaaacatagggggccaaaactactattaagc 17850547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 36715559 - 36715609
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||   ||||||||||| || ||||||||||||||||||    
T  36715559 ccaaaatcgcaactttaaaaaagttagggagctaaaactgctattaagcct 36715609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 44618002 - 44618052
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||| | |||||||| |||  ||||||||||||||||||    
T  44618002 ccaaaatcgcaacttcttgaaagttagagggttaaaactgctattaagcct 44618052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 4925706 - 4925755
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 121  Q
    |||||||||||||||||||| ||||||||||| | |||| | ||||||||    
T  4925706 ggccaaaatcgcaacttcgtgaaagttaggggacaaaaattactattaag 4925755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 5470598 - 5470651
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    |||||||||||||||||    ||||||||||||| ||||||||||| |||||||    
T  5470598 ggccaaaatcgcaactttaggaaagttagggggctaaaactgctataaagccta 5470651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 18224997 - 18225033
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaact 112  Q
    |||||||||||||||||||||||| |||||||||||||    
T  18224997 caaaatcgcaacttcgtaaaagtt-gggggcgaaaact 18225033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 25333758 - 25333807
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||| ||||| |||||||| |||||||||||  ||||||||||    
T  25333758 caaaatcgcaatttcgttaaagttagagggcgaaaactattattaagcct 25333807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 35718925 - 35718966
Alignment:
Q  79 atcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||| ||||||||| |||| |||||||||||||    
T  35718925 atcgcaacttcgtgaaagttaggaggcggaaactgctattaa 35718966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 25431 - 25379
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||| ||||| |  ||||||||||||| ||||||| ||||||||||    
T  25431 ggccaaaatcgtaactttgggaaagttagggggcaaaaactgttattaagcct 25379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 5470377 - 5470333
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||||||||| ||| | ||||| ||||||||||||||||    
T  5470377 aaaatcgcaacttcgtgaaaataaggggacgaaaactgctattaa 5470333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 23993922 - 23993978
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    ||||||||| |||||||| ||| | |||||| || |||||||||||||| |||||||    
T  23993922 ggccaaaattgcaacttcttaatacttagggagccaaaactgctattaaacctaaat 23993978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 31025926 - 31025870
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    |||||||||||||||||   ||||| |||||||| |||| ||| |||||||||||||    
T  31025926 ggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcctaaat 31025870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 36177353 - 36177405
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||| | ||| ||| ||||| ||||||| ||||||||||    
T  36177353 ggccaaaatcgcaacttcttgaaacttaaggggctaaaactgttattaagcct 36177405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 48348304 - 48348246
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaa 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  48348304 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagtctaattaaaa 48348246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 14349375 - 14349424
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14349375 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 14349424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 28712669 - 28712776
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaattttgtaannnnnnnncttatgg--ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgct 115  Q
    |||||| |||||||||||||||||||||||| ||||||||         |||| ||  |||||||| ||||||| |||||||||||||||||||||||||    
T  28712669 aaaactgctacagttgcaaaacttagggggcgattttgta-gtttttttcttagggggccaaaatcacaacttcataaaagttagggggcgaaaactgct 28712767  T
Q  116 attaagcct 124  Q
    |||||||||    
T  28712768 attaagcct 28712776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 28944228 - 28944284
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||    
T  28944228 ggccaaaatcgcaacttagtaaaagttaggggacaaaaactgctattaagcctaaat 28944284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 33329659 - 33329611
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33329659 caaaatcgcaacttcgtaaaagttagagggcgaaaactgctattaagcc 33329611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 53184779 - 53184831
Alignment:
Q  71 tggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  53184779 tggcaaaaatcgcaacttcgtaaaagttagggagcgaaaactgctattaagcc 53184831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 4474330 - 4474385
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||| ||||||    
T  4474330 ggccaaaatcgcaacttcgtaaaagttaggaggagaaaactgctattaaacctaaa 4474385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 17773220 - 17773169
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  17773220 gccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 17773169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 19074521 - 19074470
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  19074521 gccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 19074470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 20432239 - 20432189
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  20432239 ccaaagtcgcaacttcgtaaaagttagggggcaaaaactgctattaagcct 20432189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 28204528 - 28204478
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  28204528 caaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagccta 28204478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 127
Target Start/End: Complemental strand, 36677574 - 36677520
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    ||||||||||||||||||| |||||||| |||||||||||| |||||||||||||    
T  36677574 gccaaaatcgcaacttcgtgaaagttagcgggcgaaaactgttattaagcctaaa 36677520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 127
Target Start/End: Complemental strand, 36687656 - 36687602
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    ||||||||||||||||||| |||||||| |||||||||||| |||||||||||||    
T  36687656 gccaaaatcgcaacttcgtgaaagttagcgggcgaaaactgttattaagcctaaa 36687602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 27178186 - 27178141
Alignment:
Q  77 aaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  27178186 aaatcgcaacttcgtaaaagttaggggacgaaaactgctattaagc 27178141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 38958109 - 38958166
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaa 132  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  38958109 caaaatcgtaatttcgtgaaagttagggggcgaaaactgctattaagcctaaaaaaaa 38958166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 14856594 - 14856546
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  14856594 caaaatcgcaacttcgtgaaagttagggtgcgaaaactgctattaagcc 14856546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 46226953 - 46227005
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  46226953 caaaatcgcaacttcgtgaaagttaggggacgaaaactgctattaatcctaaa 46227005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 51315747 - 51315802
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    ||||||||||||||||| |  ||||||||||||| |||||||||||||||||||||    
T  51315747 ggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcctaaa 51315802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 3193047 - 3193097
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  3193047 caaaatcgcaacttcttgaaagttagggggtgaaaactgctattaagccta 3193097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 14340782 - 14340732
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  14340782 ccaaaatcgtaacttcgtgaaagttagggggcgaaaactcctattaagcct 14340732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 47189649 - 47189599
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    |||||||||||||||||| |||||||||||| |||||||||| ||||||||    
T  47189649 ggccaaaatcgcaacttcataaaagttagggagcgaaaactgttattaagc 47189599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 86827 - 86880
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    |||||||||||||||||| | ||||||||||| |||||||| ||||||||||||    
T  86827 ggccaaaatcgcaacttcatgaaagttaggggacgaaaactcctattaagccta 86880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 54719042 - 54718993
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||||| |||||||| || ||||||||||||||||||||    
T  54719042 caaaatcgcaacttcgtgaaagttagtggacgaaaactgctattaagcct 54718993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 43747330 - 43747282
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||||||||||||||||  || ||||||||||||||||    
T  43747330 ggccaaaatcgcaacttcgtaaaagttataggacgaaaactgctattaa 43747282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 1814597 - 1814550
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |||||    
T  1814597 aaaattgcaacttcgtaaaagttagggggcgaaaactactatgaagcc 1814550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 19404445 - 19404399
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  19404445 aaaatcgcaacttcgtgaaagttaggggacgaaaactgttattaagc 19404399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 35359247 - 35359304
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaata 129  Q
    |||||||||  ||||||||| |||||||| ||| ||||||| ||||||||||||||||    
T  35359247 ggccaaaattacaacttcgtgaaagttagagggtgaaaactactattaagcctaaata 35359304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 44433329 - 44433382
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    |||| |||||||||||  | |||||||||||||| |||||||||||||||||||    
T  44433329 ggccgaaatcgcaactgtggaaaagttagggggctaaaactgctattaagccta 44433382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 53255287 - 53255340
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    |||||||||||||||||| |||||  |||| ||| |||||||||||||||||||    
T  53255287 ggccaaaatcgcaacttcttaaaacataggaggccaaaactgctattaagccta 53255340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 12759554 - 12759502
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||| ||| | ||||||||||||| ||||||| ||||||||||    
T  12759554 ggccaaaatcgcaatttcttgaaagttagggggcaaaaactgttattaagcct 12759502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 25843604 - 25843648
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||  |||||||||||||||| |||||||||||||||||    
T  25843604 aaaatcgcacattcgtaaaagttagggcgcgaaaactgctattaa 25843648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 43586619 - 43586572
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||||    
T  43586619 ggccaaaatcgcaactccgtaaaagttaaggggcg-aaactgctattaa 43586572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 44586049 - 44586097
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||||| |  ||||||||||||| ||||||||||||||    
T  44586049 ggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 44586097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 25902617 - 25902668
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||| |  ||||||||||||| ||||||| ||||||||||    
T  25902617 gccaaaatcgcaactttgagaaagttagggggctaaaactgatattaagcct 25902668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 1807437 - 1807487
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||| ||| |||||  |||||||| ||||||||||||||||||    
T  1807437 ccaaaatcgcaaattcttaaaatatagggggccaaaactgctattaagcct 1807487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 54476091 - 54476033
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaaa 133  Q
    ||||||||||||||| |||||  |||||||| |||| ||| |||||||||||| |||||    
T  54476091 caaaatcgcaacttcttaaaatatagggggccaaaagtgcaattaagcctaaaaaaaaa 54476033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 578674 - 578727
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||| | |||||||||| ||| ||||||| |||||| ||||    
T  578674 ggccaaaatcgcaactttggaaaagttaggaggctaaaactgatattaaaccta 578727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 3354950 - 3355003
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||||| | | | ||||||||| ||| |||||||||||||||||    
T  3354950 ccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 3355003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 44433104 - 44433052
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    ||||||||| ||||||||| ||||||| |||| ||||| |||||||||||||||    
T  44433104 gccaaaatcacaacttcgtgaaagtta-ggggtgaaaattgctattaagcctaa 44433052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 50420887 - 50420936
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||| ||| | ||||| ||| ||||||||||||||||||    
T  50420887 caaaatcgcaacttcataatacttaggaggccaaaactgctattaagcct 50420936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 1814818 - 1814866
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    ||||||||| ||||| | |||||||||| ||| ||||||||||||||||    
T  1814818 ccaaaatcgaaactttggaaaagttaggaggctaaaactgctattaagc 1814866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 7218259 - 7218219
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaattttgtaa 58  Q
    |||||| ||| |||||||||||||||| |||||||||||||    
T  7218259 aaaactgctatagttgcaaaacttaggaggcaattttgtaa 7218219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 38957896 - 38957844
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||   |||| ||||| ||| ||||||||||||||||||    
T  38957896 ggccaaaatcgcaactttaaaaaaattaggaggctaaaactgctattaagcct 38957844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 51315601 - 51315561
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaattttgtaa 58  Q
    |||||| ||||||||||||||||||||||||  ||||||||    
T  51315601 aaaactgctacagttgcaaaacttagggggcggttttgtaa 51315561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 54464427 - 54464478
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||| ||||||| ||||| |||||||||| |||||| ||||||||||||||    
T  54464427 ggccaatatcgcaaattcgtgaaagttagggagcgaaa-ctgctattaagcct 54464478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 18632602 - 18632651
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18632602 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 18632651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 39642251 - 39642199
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39642251 ggccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcct 39642199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 23220826 - 23220879
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  23220826 ccaaaatcgtaacttcgtaaaagttagggggcgaaaactgctatcaagcctaaa 23220879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 25486479 - 25486529
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  25486479 aaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaagcctaa 25486529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 25085447 - 25085390
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaa 132  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||||||||| ||||    
T  25085447 caaaatcgcaactttatgaaagttagggggcgaaaactgctattaagcctaaaaaaaa 25085390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 46573034 - 46573142
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaattttgtaannnnnnnncttatgg--ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgct 115  Q
    |||||| ||||||||||||||||||||||||| | |||||         |||| ||  ||||||||||||||||||||||||||| || | |||||||||    
T  46573034 aaaactgctacagttgcaaaacttagggggcagtgttgtagttttttttcttaggggaccaaaatcgcaacttcgtaaaagttagaggacaaaaactgct 46573133  T
Q  116 attaagcct 124  Q
    |||||||||    
T  46573134 attaagcct 46573142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 3377552 - 3377500
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||||||||    
T  3377552 ggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcct 3377500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 16874553 - 16874511
Alignment:
Q  78 aatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  16874553 aatcgcaacttcgtaaaagttagggggcgaaaattgctattaa 16874511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 14978846 - 14978797
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  14978846 ccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcc 14978797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 23891711 - 23891662
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 121  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  23891711 ggccaaaatcacaacttcgtgaaagttagggagcgaaaactgctattaag 23891662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 46880786 - 46880741
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||    
T  46880786 caaaatcgcaacttcgtaaaaattagggagcgaaaactgctattaa 46880741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 51250536 - 51250484
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||||| | |||||||||||||| ||||||| ||||||||||    
T  51250536 ggccaaaatcgcaactttgaaaaagttagggggctaaaactgttattaagcct 51250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 14979063 - 14979114
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||| |||||||| | |||||||||||||||||||| ||||||||||    
T  14979063 ggccaaaattgcaacttcatgaaagttagggggcgaaaacttctattaagcc 14979114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 50401635 - 50401682
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  50401635 gccaaaatcgcaacttcgaaaaaattaaggggcgaaaactgctattaa 50401682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 18216737 - 18216683
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    ||||||||| | |||||| |||||||||| |||||||||||| ||||||||||||    
T  18216737 ggccaaaattgtaacttcataaaagttagagggcgaaaactgttattaagcctaa 18216683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 46912239 - 46912193
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||||||||||| ||||||| || |||||||||||||||||    
T  46912239 ccaaaatcgcaacttcgtgaaagttaaggagcgaaaactgctattaa 46912193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 7060675 - 7060618
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaa 132  Q
    ||||||||||||||| |||||||||  | ||||||||||||||||| |||||| ||||    
T  7060675 caaaatcgcaacttcataaaagttaaagagcgaaaactgctattaaacctaaaaaaaa 7060618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 8009980 - 8010033
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||  ||||||||||||||||||| ||| |||||| ||||||||||||||    
T  8009980 ccaaaattacaacttcgtaaaagttaggaggctaaaactactattaagcctaaa 8010033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 12960897 - 12960844
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||| | ||||||||| |||| ||||||| |||||||||||    
T  12960897 ggccaaaatcgcaactttgaaaaagttagcgggctaaaactgttattaagccta 12960844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 17760957 - 17761006
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||| |||||||||||||||||| | | ||||||||||||||||||||    
T  17760957 caaaattgcaacttcgtaaaagttaagagacgaaaactgctattaagcct 17761006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 5287301 - 5287245
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    |||||||||||||||||||| ||||||| ||| |||| ||||  |||||||||||||    
T  5287301 ggccaaaatcgcaacttcgtgaaagttaagggccgaacactgtaattaagcctaaat 5287245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 6320844 - 6320891
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  6320844 ggccaaaatcgcaacttcttaaaagtta-ggggcgaaaactggtattaa 6320891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 10532263 - 10532211
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    ||||||||||||||| ||| | ||||||||  |||||||||||||||||||||    
T  10532263 caaaatcgcaacttcctaatacttagggggtcaaaactgctattaagcctaaa 10532211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 50226443 - 50226391
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||||| | |||||||||||||| |||||||  |||||||||    
T  50226443 ggccaaaatcgcaactttgaaaaagttagggggctaaaactgtaattaagcct 50226391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 3377774 - 3377825
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||||| |||||| |  ||||||||||||| |||||||||||||||||    
T  3377774 ggccaaaatcacaactttgggaaagttagggggctaaaactgctattaagcc 3377825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 27864420 - 27864474
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    ||||||||| ||||||| | ||||||||||| || ||||||||| ||||||||||    
T  27864420 ggccaaaattgcaactttggaaaagttagggagctaaaactgctgttaagcctaa 27864474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 32295219 - 32295277
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaaa 133  Q
    |||||||||||||| | |||||||  ||||| |||||| |||||||||| |||||||||    
T  32295219 caaaatcgcaactttgaaaaagtttaggggctaaaactcctattaagccaaaataaaaa 32295277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 37008268 - 37008218
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    |||||||||||||||||| | |||  |||||||| ||||||||||||||||    
T  37008268 ggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagc 37008218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 41997691 - 41997637
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    ||||||||||||||||| || ||| ||||||||| |||| ||||||||| |||||    
T  41997691 ggccaaaatcgcaactttgtgaaaattagggggcaaaaattgctattaaacctaa 41997637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 51251391 - 51251431
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgcta 116  Q
    ||||||||||||||||||||||||| ||||| ||||||||||    
T  51251391 caaaatcgcaacttcgtaaaagtta-ggggcaaaaactgcta 51251431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 8009780 - 8009732
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||||||| ||||||| |  ||| ||||||||||||||    
T  8009780 ggccaaaatcgcaacttcgaaaaagtttgaaggctaaaactgctattaa 8009732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 12075276 - 12075328
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||||||   |||  |||||||| ||||||||||||||||||    
T  12075276 ggccaaaatcgcaacttctgtaaacatagggggccaaaactgctattaagcct 12075328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 17760733 - 17760681
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||||| |   |||||||||||| ||| ||||||||||||||    
T  17760733 ggccaaaatcgcaactttgaggaagttagggggctaaagctgctattaagcct 17760681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 41915788 - 41915840
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    ||||||||||||||| | |||  |||||| | |||||||||||||||||||||    
T  41915788 caaaatcgcaacttcttgaaatataggggaccaaaactgctattaagcctaaa 41915840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 45739143 - 45739183
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaattttgtaa 58  Q
    |||||| |||||||||||||||||| |||||| ||||||||    
T  45739143 aaaactgctacagttgcaaaacttatggggcagttttgtaa 45739183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 45739196 - 45739244
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||||||||||||| |||||||  || |||||||| |||||||    
T  45739196 ggccaaaatcgcaacttcgtgaaagttaaaggacgaaaactactattaa 45739244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 46895485 - 46895437
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||| | |||  |||||||| |||||||||||||||||    
T  46895485 caaaatcgcaacttcttgaaatatagggggccaaaactgctattaagcc 46895437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 2974897 - 2974952
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  2974897 ggccaaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaagcctaaa 2974952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 27904746 - 27904808
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaaat 134  Q
    ||||||||||||||||| | ||||||||| |||| ||||||||||||||||||||||| ||||    
T  27904746 ggccaaaatcgcaactttgaaaaagttagagggctaaaactgctattaagcctaaatataaat 27904808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 3999134 - 3999089
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  3999134 caaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaa 3999089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 35166557 - 35166610
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagtta-gggggcgaaaactgctattaagcctaa 126  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  35166557 ccaaaatcgcaacttcgtgaaagttaggggggcgaaaactgctattaagcctaa 35166610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 39574289 - 39574240
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  39574289 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaagc 39574240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 43098076 - 43098031
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  43098076 caaaatcgcaacttcgtaaaagttaggggacgaaaactgctattaa 43098031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 20512462 - 20512514
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||||| ||||||| | ||||||||||||||||||||||    
T  20512462 ggccaaaatcgcaacttcgtgaaagttaagaggcgaaaactgctattaagcct 20512514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 24779537 - 24779592
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||||  | ||||||||||||| |||||||||||||||||||||||    
T  24779537 ggccaaaatcgcaacagcataaaagttaggggacgaaaactgctattaagcctaaa 24779592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 12406092 - 12406038
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    ||||||||||||||||| |  ||||||||||||| ||||||||||||||||||||    
T  12406092 ggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcctaa 12406038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 32391770 - 32391720
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  32391770 ggccaaaatcacaacttcgtgaaagttaaggggcgaaaactgctattaagc 32391720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 3333740 - 3333695
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||    
T  3333740 caaaatcgcaacttcatgaaagttagggggcgaaaactgctattaa 3333695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 25910992 - 25911037
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 121  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||    
T  25910992 aaaatctcaacttcgtgaaagttagggggcgaaaactgctattaag 25911037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 37897980 - 37898029
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 121  Q
    ||||||||||||||||| | |||||||||||||| |||||||||||||||    
T  37897980 ggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaag 37898029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 3333964 - 3334015
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||||| | |||||||||||||| |||||| ||||||||||    
T  3333964 ggccaaaatcgcaactttggaaaagttagggggctaaaactactattaagcc 3334015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 20629783 - 20629732
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    ||||||||||||| || ||||||| |||||||||||||||||||| ||||||    
T  20629783 aaaatcgcaactttgtgaaagttaaggggcgaaaactgctattaaacctaaa 20629732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 36798441 - 36798500
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaaa 133  Q
    ||||||||||||||| |  ||||||||||||| |||||||||||||||||| ||| ||||    
T  36798441 ccaaaatcgcaactttgagaaagttagggggctaaaactgctattaagccttaattaaaa 36798500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 6464338 - 6464392
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    |||||||||||||||||| | |||  |||||||| ||||||||||||||||||||    
T  6464338 ggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcctaa 6464392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 12406303 - 12406360
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaata 129  Q
    |||||||||| |||||| | |||||||||||||| |||| ||||||||||||| ||||    
T  12406303 ggccaaaatctcaactttgaaaaagttagggggctaaaattgctattaagccttaata 12406360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 24405704 - 24405812
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaattttgtaannnnnnnncttatg--gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgct 115  Q
    |||||||||||||||||||||||||| ||||| |||||||         |||| |  ||||||||||||| ||||| |  ||||||| ||| ||||||||    
T  24405704 aaaactcctacagttgcaaaacttagtgggcagttttgtagttttttttcttagggtgccaaaatcgcaagttcgtgattgttagggtgcggaaactgct 24405803  T
Q  116 attaagcct 124  Q
    |||||||||    
T  24405804 attaagcct 24405812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 40276125 - 40276017
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaattttgtaannnnnnnncttat--ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgct 115  Q
    |||||| |||||||||||||||||||||| | |||||||||        ||||   ||| ||||||||||||||   ||||||||||| ||||||||| |    
T  40276125 aaaactgctacagttgcaaaacttaggggacgattttgtaattttttttcttagagggctaaaatcgcaacttcacgaaagttaggggccgaaaactgat 40276026  T
Q  116 attaagcct 124  Q
    |||||||||    
T  40276025 attaagcct 40276017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 18403253 - 18403304
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||| | | ||||||||| ||||||||||||||||||||||    
T  18403253 ggccaaaatcgcaact-catgaaagttaggtggcgaaaactgctattaagcct 18403304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 19340867 - 19340827
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaattttgtaa 58  Q
    |||||| |||||||||||||||||||||||| |||||||||    
T  19340867 aaaactgctacagttgcaaaacttagggggcgattttgtaa 19340827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 25364088 - 25364136
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||| |||||||||| |||||||| ||| |||||||||||||||    
T  25364088 ggccaaaattgcaacttcgtgaaagttagagggtgaaaactgctattaa 25364136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 30603719 - 30603679
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaattttgtaa 58  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  30603719 aaaactgctacagttgcaaaacttagggggcagttttgtaa 30603679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 6130306 - 6130247
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaa 131  Q
    |||||| || |||||||||| || ||||||| ||||||| ||||||||||||| ||||||    
T  6130306 ggccaacattgcaacttcgtgaatgttagggagcgaaaattgctattaagccttaataaa 6130247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 122
Target Start/End: Original strand, 35877545 - 35877592
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    |||||| ||||| |||| |||||||||||| |||||||||||||||||    
T  35877545 caaaattgcaacctcgtgaaagttagggggtgaaaactgctattaagc 35877592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 24405538 - 24405488
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    |||||||||||||| | |||||||||||| | |||||||||||||| ||||    
T  24405538 caaaatcgcaactttgaaaaagttaggggactaaaactgctattaaaccta 24405488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 103
Target Start/End: Original strand, 26702677 - 26702707
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggg 103  Q
    |||||||||||||||||||||||||||||||    
T  26702677 gccaaaatcgcaacttcgtaaaagttagggg 26702707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 103
Target Start/End: Original strand, 26972410 - 26972440
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggg 103  Q
    |||||||||||||||||||||||||||||||    
T  26972410 gccaaaatcgcaacttcgtaaaagttagggg 26972440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 42586034 - 42585984
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||| | |||  |||||||| |||||||||||||||||||    
T  42586034 caaaatcgcaacttcttgaaacatagggggccaaaactgctattaagccta 42585984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 19340812 - 19340767
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||| || | |||||||||||||| ||||||||||||||    
T  19340812 caaaatcgcaattttggaaaagttagggggctaaaactgctattaa 19340767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 26563039 - 26562986
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||| |||||| | ||||||||| || | |||||||||||||||||||||    
T  26563039 ccaaaatcacaactttggaaaagttagcggactaaaactgctattaagcctaaa 26562986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 34320010 - 34319958
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||||   ||||||||||| ||||||||||||||| |||||    
T  34320010 ggccaaaatcgcaacttcaagaaagttagggg-cgaaaactgctattatgccta 34319958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 586678 - 586726
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||| | |||||||| || |||||| ||||||||||||    
T  586678 caaaatcgcaacttcatgaaagttagaggacgaaaattgctattaagcc 586726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 127
Target Start/End: Complemental strand, 6463998 - 6463966
Alignment:
Q  95 agttagggggcgaaaactgctattaagcctaaa 127  Q
    ||||||||||| |||||||||||||||||||||    
T  6463998 agttagggggccaaaactgctattaagcctaaa 6463966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 16132997 - 16133045
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||| |||||| || |||||||||  |||||||||||    
T  16132997 aaaatcgcaacttcgtgaaagttgggaggcgaaaaccactattaagcct 16133045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 22300873 - 22300921
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    |||||||||||||| |||  || ||||||||||||||||| ||||||||    
T  22300873 ccaaaatcgcaactacgtgcaaattagggggcgaaaactgttattaagc 22300921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 36798221 - 36798169
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||| ||||||| | |||||||| ||| | ||||||||||||||||||    
T  36798221 ggccaaaattgcaactttggaaaagttaagggtctaaaactgctattaagcct 36798169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 40132952 - 40132904
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||||||||| | ||||||||| || | |||||||||||||||||    
T  40132952 caaaatcgcaactttgaaaaagttagaggactaaaactgctattaagcc 40132904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 40133142 - 40133190
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||||| |  ||||||||||||| |||| |||||||||    
T  40133142 ggccaaaatcgcaactttgggaaagttagggggctaaaattgctattaa 40133190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 50769624 - 50769675
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50769624 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgcttttaagcc 50769675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 35393934 - 35393992
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaa 132  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||    
T  35393934 ccaaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaagcctaaaaaaaa 35393992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 11824462 - 11824514
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  11824462 gccaaaatcgcaacttcgtaaaagttagggggcggaaactgttattaagccta 11824514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 35383816 - 35383764
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  35383816 ggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaagcct 35383764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 43074667 - 43074615
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  43074667 ggccaaaatcgcaacttcgtgaaagttagggggcgaaaattgctattaagcct 43074615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 2654004 - 2653953
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  2654004 ggccaaaatcgcaacttcgtaaaagttaggaggcaaaaactgctattaagcc 2653953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 53312337 - 53312275
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaaat 134  Q
    ||||||||||||||||| | |||||||||||||| |||| |||||||||||||||| ||||||    
T  53312337 ggccaaaatcgcaactttgaaaaagttagggggctaaaaatgctattaagcctaaagaaaaat 53312275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 14449324 - 14449276
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  14449324 ggccaaaatctcaacttcgtgaaagttagggggcgaaaactgctattaa 14449276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 54983894 - 54983843
Alignment:
Q  77 aaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| |||||    
T  54983894 aaatcgcatcttcgtaaaagttaggggacgaaaactgctattaagcttaaat 54983843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 21957730 - 21957780
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||||||    
T  21957730 ggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagc 21957780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 27978959 - 27979009
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||    
T  27978959 ggccaaaatcgcaacttcgttaaagttagggggcgaaaaatgttattaagc 27979009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 51371728 - 51371778
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||  |||||||||||||||||||| |||||||||||    
T  51371728 ccaaaatcgcaacttcgagaaagttagggggcgaaaactactattaagcct 51371778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 1420586 - 1420537
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 121  Q
    ||||||||||||||||| | |||||||||||||| |||||||||||||||    
T  1420586 ggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaag 1420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 51362806 - 51362859
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    ||||||| |||||| |||||||||||||| |||||||||||||||| |||||||    
T  51362806 caaaatcacaactttgtaaaagttaggggacgaaaactgctattaaacctaaat 51362859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 53312551 - 53312600
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||||| |||||||||||| |||||||| ||||||||||    
T  53312551 caaaatcgcaacttcgtgaaagttagggggtgaaaactgttattaagcct 53312600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 2016842 - 2016790
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||| ||||||    
T  2016842 ggccaaaatcgcaactttggaaaagttagggggctaaaactgctatcaagcct 2016790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 6614897 - 6614845
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||||| ||||||| ||| |||||| ||||||||||||||    
T  6614897 gccaaaatcgcaacttcgtgaaagttaagggtcgaaaaatgctattaagccta 6614845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 23759612 - 23759560
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||  | |||||||||||||||||||| |||||||||||    
T  23759612 ggccaaaatcgcaactttatgaaagttagggggcgaaaactactattaagcct 23759560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 37831643 - 37831595
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  37831643 ggccaaaatcgcaacttcttaaaacttagggggctaaaactgctattaa 37831595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 1571669 - 1571724
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||||||||| |||||||||  | |||||||| |||||||||||||    
T  1571669 ggccaaaatcgcaacttcgtgaaagttaggacgtgaaaactgttattaagcctaaa 1571724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 14449548 - 14449599
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||||| | |||||||||||||| |||||| ||||||||||    
T  14449548 ggccaaaatcgcaactttggaaaagttagggggctaaaactactattaagcc 14449599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 16292534 - 16292585
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||||| |||||||||||||||||| || |||||| ||||||    
T  16292534 aaaatcgcaacttcgtgaaagttagggggcgaaaattgttattaaacctaaa 16292585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 53924795 - 53924744
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    ||||||| ||||||||| ||||||||||||||| |||| |||||||||||||    
T  53924795 caaaatcacaacttcgtgaaagttagggggcgagaactactattaagcctaa 53924744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 2181388 - 2181438
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||||| |||||||||||| || |||| ||||||||||||    
T  2181388 gccaaaatcgcaacttcataaaagttagggagcaaaaagtgctattaagcc 2181438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 29697786 - 29697836
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||| | ||||||||| || |||||||||||||||||||    
T  29697786 ccaaaatcgcaacttcatgaaagttaggaggtgaaaactgctattaagcct 29697836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 35615365 - 35615315
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    |||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  35615365 ggccaaaatcgcaactttagaaaagttagggggctaaaactgctattaagc 35615315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 3658190 - 3658235
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||| |||||||||| || ||||||||||||||||    
T  3658190 caaaatcgcaacttcataaaagttagaggacgaaaactgctattaa 3658235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 6207225 - 6207176
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||| ||||||||  |||||||||| ||||||||||||||||||||    
T  6207225 ccaaaatcacaacttcgctaaagttagggagcgaaaactgctattaagcc 6207176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 20112188 - 20112139
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||| |||||| |||||||||||||  |||||||||||||||||||    
T  20112188 caaaatcgtaacttcttaaaagttaggggttgaaaactgctattaagcct 20112139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 53831201 - 53831152
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  53831201 ccaaaatcgcaacttcttaaaacatagggggccaaaactgctattaagcc 53831152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 4411493 - 4411537
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||||    
T  4411493 aaaatcgcaacttcgtgaaaattagggggcgaaaactgttattaa 4411537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 8965569 - 8965525
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||| ||||||||||||||| |||||||||||||| |||||||    
T  8965569 aaaatcacaacttcgtaaaagtaagggggcgaaaacttctattaa 8965525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 19909224 - 19909172
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||||| |  ||||||||||||  ||||||||||||||||||    
T  19909224 ggccaaaatcgcaactttgagaaagttagggggttaaaactgctattaagcct 19909172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 25909538 - 25909486
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||| |||||| | |||||||||||||  ||||||||||||||||||    
T  25909538 ggccaaaatcacaactttggaaaagttagggggttaaaactgctattaagcct 25909486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 30064364 - 30064416
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||| ||||| |||||| || |||||| ||||||||||||    
T  30064364 gccaaaatcgcaacttcttaaaacttagggagccaaaactactattaagccta 30064416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 2017051 - 2017106
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||||||    ||||||| ||||| |||||||||||||||||||||    
T  2017051 ggccaaaatcgcaactttaggaaagttatggggctaaaactgctattaagcctaaa 2017106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 4796301 - 4796356
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    ||||||||| |||| || | | |||||||||||| |||||||||||||||||||||    
T  4796301 ggccaaaattgcaattttggataagttagggggctaaaactgctattaagcctaaa 4796356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 121
Target Start/End: Original strand, 35615433 - 35615479
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 121  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  35615433 ccaaaatcgcaacttcgtgaaagtta-ggggtgaaaactgctattaag 35615479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 53578922 - 53578973
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||| |||||  |||||||| ||||| |||||||||||||||    
T  53578922 aaaatcgcaacttcttaaaacatagggggccaaaacggctattaagcctaaa 53578973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 1420809 - 1420863
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    ||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||||||    
T  1420809 ccaaaatcgtaactttgggaaagttaaggggctaaaactgctattaagcctaaat 1420863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 2836950 - 2836896
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    ||||||||||||| ||| | |||||||||||||  ||||||| ||||||||||||    
T  2836950 ggccaaaatcgcagctttggaaaagttagggggttaaaactgttattaagcctaa 2836896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 21322754 - 21322696
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaaat 134  Q
    |||||||||||||| | |||||||| ||||||||| |||||||||  ||||| ||||||    
T  21322754 aaaatcgcaacttcatgaaagttagagggcgaaaattgctattaaatctaaaaaaaaat 21322696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 21871650 - 21871696
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 121  Q
    |||||||||||||| | |||||||||||||| |||| ||||||||||    
T  21871650 caaaatcgcaactttgaaaaagttagggggctaaaattgctattaag 21871696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 21927511 - 21927557
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 121  Q
    |||||||||||||| | |||||||||||||| |||| ||||||||||    
T  21927511 caaaatcgcaactttgaaaaagttagggggctaaaattgctattaag 21927557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 41148565 - 41148615
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||| ||||||| |||||  |||||||| ||||||||||||||||||    
T  41148565 ccaaaatcacaacttcttaaaatatagggggccaaaactgctattaagcct 41148615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 4796087 - 4796034
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    |||||||||||||| || | |||||||||||| | |||| ||||||||||||||    
T  4796087 ggccaaaatcgcaattttgaaaaagttaggggactaaaaatgctattaagccta 4796034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 12719545 - 12719516
Alignment:
Q  28 cagttgcaaaacttagggggcaattttgta 57  Q
    ||||||||||||||||||||||||||||||    
T  12719545 cagttgcaaaacttagggggcaattttgta 12719516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 14016771 - 14016722
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 121  Q
    ||||||||||||||||| |  ||||||||||||| ||||| |||||||||    
T  14016771 ggccaaaatcgcaactttgggaaagttagggggctaaaaccgctattaag 14016722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 30064051 - 30064002
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||||||||||| |||||  |||||||| |||||| ||||||||||    
T  30064051 ccaaaatcgcaacttcttaaaacatagggggccaaaacttctattaagcc 30064002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 43074832 - 43074889
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaa 132  Q
    |||||||||||||| |  ||||||||||||| |||| |||||||||||| | ||||||    
T  43074832 caaaatcgcaactttgggaaagttagggggctaaaattgctattaagccaatataaaa 43074889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 44356660 - 44356712
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||| |  ||||||||||| | |||||||||||||||||||    
T  44356660 ggccaaaatcgcaactttgagaaagttagggg-ctaaaactgctattaagccta 44356712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 49185822 - 49185870
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 121  Q
    ||||||||||||||||| || |||||| ||||| ||||||||||||||||    
T  49185822 ggccaaaatcgcaactttgtgaaagtt-gggggtgaaaactgctattaag 49185870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 52463052 - 52463101
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||| | |||| ||||||||| ||||||| |||||||||    
T  52463052 ccaaaatcgcaactttgaaaaaattagggggctaaaactgttattaagcc 52463101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 1186709 - 1186657
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||   |||||||||||||| |||| ||| |||||||||    
T  1186709 ggccaaaatcgcaacttttaaaaagttagggggccaaaagtgcaattaagcct 1186657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 3369898 - 3369846
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||| | | | ||||||||| ||||||| ||||||||||    
T  3369898 ggccaaaatcgcaacttcttgatacttagggggcaaaaactgatattaagcct 3369846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 5548016 - 5548064
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||||||||||| |||||  |||| ||| ||||||||||||||    
T  5548016 ggccaaaatcgcaacttcttaaaacataggaggccaaaactgctattaa 5548064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 6033906 - 6033958
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||| |||||  |||||||| |||| ||| |||||||||    
T  6033906 ggccaaaatcgcaacttcttaaaatatagggggccaaaaatgcgattaagcct 6033958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 8070679 - 8070623
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    ||||||| | ||||||| | |||||||||||||  ||||||||||||||| ||||||    
T  8070679 ggccaaagttgcaactttggaaaagttagggggttaaaactgctattaagtctaaat 8070623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 10059966 - 10060022
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaa 132  Q
    ||||||||||||| | |||| ||||||| | ||||||||||||||||| ||| ||||    
T  10059966 aaaatcgcaactttgaaaaaattaggggtctaaaactgctattaagccaaaagaaaa 10060022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 14060804 - 14060760
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctatta 119  Q
    |||||||||||||| | |||||||||||||  |||||||||||||    
T  14060804 caaaatcgcaactttgaaaaagttagggggttaaaactgctatta 14060760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 21451506 - 21451458
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||| |  ||||||||| ||| ||||||||||||||||||    
T  21451506 aaaatcgcaactttgagaaagttaggaggctaaaactgctattaagcct 21451458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 51362587 - 51362539
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||||||||||   |||||||||||||| |||||| |||||||    
T  51362587 ggccaaaatcgcaactttagaaaagttagggggctaaaactactattaa 51362539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 28011333 - 28011447
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaattttgtaannnnnnnncttatggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctat 117  Q
    |||||| |||||||||||||||||| |||||  |||||||         |||| || ||||||||||||||||| |||||||||||| ||||||||||||    
T  28011333 aaaactgctacagttgcaaaacttaaggggcggttttgtagttttttctcttagggacaaaatcgcaacttcgtgaaagttagggggtgaaaactgctat 28011432  T
Q  118 taagcctaaataaaa 132  Q
    |||| ||||| ||||    
T  28011433 taaggctaaaaaaaa 28011447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 238978 - 238926
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  238978 caaaatcgcaacttcgtgaaaattagggggcgaaaactgctattaagcctaaa 238926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 12766477 - 12766529
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  12766477 ggccaaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaagcct 12766529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 33401317 - 33401367
Alignment:
Q  73 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  33401317 gccaaaatcgtaacttcgtaaaagttagggggtgaaaactgctattaagcc 33401367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 3579646 - 3579593
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  3579646 ggccaaaatcgcaacttcgtgaaagttaagggacgaaaactgctattaagccta 3579593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 5003137 - 5003089
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  5003137 caaaatcgcaacttcttaaaagttagggggcgaaaactgttattaagcc 5003089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 10727239 - 10727186
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||| ||||||||  ||||||||| |||||||||||||||||||||||||    
T  10727239 ccaaaatcacaacttcgctaaagttaggaggcgaaaactgctattaagcctaaa 10727186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 30349619 - 30349672
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||| | |||||||||||| | |||||||||||||||||||    
T  30349619 ggccaaaatcgcaactttgaaaaagttaggggacaaaaactgctattaagccta 30349672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 1377469 - 1377517
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  1377469 ggccaaaatcgcaacttcgtgaaagttaggggacgaaaactgatattaa 1377517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 1385217 - 1385265
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  1385217 ggccaaaatcgcaacttcgtgaaagttaggggacgaaaactgatattaa 1385265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 10727457 - 10727517
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaa 132  Q
    |||||||||| |||||| | |||||||||||||| ||||||||||||| ||||||| ||||    
T  10727457 ggccaaaatcacaactttggaaaagttagggggctaaaactgctattatgcctaaaaaaaa 10727517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 18030988 - 18030944
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgcta 116  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  18030988 ggccaaaatcgcaacttcgtgaaagttagggggagaaaactgcta 18030944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 17248905 - 17248953
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 121  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  17248905 ggccaaaatcgcaacttcctaaaagtta-ggggcgacaactgctattaag 17248953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 33399836 - 33399784
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||| | |||||||| ||||| |||||||||||||||||||    
T  33399836 ggccaaaatcgcaactttggaaaagtta-ggggctaaaactgctattaagccta 33399784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 2840838 - 2840790
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    ||||||||||||||| ||||||||| | | |||||||||||||||||||    
T  2840838 ccaaaatcgcaactttgtaaaagttggagagcgaaaactgctattaagc 2840790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 5607014 - 5607066
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagg-gggcgaaaactgctattaagccta 125  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||| ||||    
T  5607014 ccaaaatcgcaacttcgtaaaaattaggtggacgaaaactgctattaaaccta 5607066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 6036692 - 6036644
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||||||||||||  ||||| | ||||||||||||||||||||||    
T  6036692 caaaatcgcaacttcgtggaagtttgcgggcgaaaactgctattaagcc 6036644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 26601727 - 26601783
Alignment:
Q  77 aaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaaa 133  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||| ||| ||| |||||    
T  26601727 aaatcgcaacttcgtgaaagttaggaggcaaaaactgctattatgccaaaaaaaaaa 26601783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 32143460 - 32143555
Alignment:
Q  20 aactcctacagttgcaaaacttagggggcaattttgtaannnnnnnncttat--ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactg 113  Q
    |||| ||||||||||||||||||| |||||||||||||         ||||   || ||||||||||||||| |||||||||||||| ||||||||    
T  32143460 aactgctacagttgcaaaacttagagggcaattttgtagttatttttcttagagggtcaaaatcgcaacttcataaaagttagggggtgaaaactg 32143555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 266228 - 266189
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaattttgta 57  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  266228 aaaactgctacagttgcaaaacttaaggggcaattttgta 266189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 2203238 - 2203183
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    ||||||||||||||||| |  |||||||||| || |||| ||||||||||||||||    
T  2203238 ggccaaaatcgcaactttgggaaagttagggagctaaaattgctattaagcctaaa 2203183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 30349397 - 30349348
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||| |  |||||||| |||| ||||||||||||||||||    
T  30349397 caaaatcgcaactttgggaaagttagagggctaaaactgctattaagcct 30349348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 2203359 - 2203395
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaatttt 54  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  2203359 aaaactactacagttgcaaaacttagggggcagtttt 2203395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 12798774 - 12798726
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||| | |||  |||||||| ||||||||||||||||||    
T  12798774 aaaatcgcaacttcttgaaatatagggggccaaaactgctattaagcct 12798726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 17248684 - 17248636
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||   |||||||||| ||| |||||||||||||||||    
T  17248684 caaaatcgcaactttaaaaaagttaggaggctaaaactgctattaagcc 17248636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 20474970 - 20475014
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctatta 119  Q
    |||||||||||||| | |||||||||||||| |||| ||||||||    
T  20474970 caaaatcgcaactttgaaaaagttagggggctaaaattgctatta 20475014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 26311442 - 26311394
Alignment:
Q  77 aaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    |||| ||||||| |||||||||||| ||| ||||||| |||||||||||    
T  26311442 aaattgcaactttgtaaaagttaggaggctaaaactgttattaagccta 26311394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 30369832 - 30369784
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||| |||||  || ||||| |||||||||||||||||    
T  30369832 caaaatcgcaacttcttaaaacataaggggccaaaactgctattaagcc 30369784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 17070958 - 17070906
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  17070958 ggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagcct 17070906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 17577314 - 17577366
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  17577314 ggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagcct 17577366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 9762462 - 9762513
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  9762462 ggccaaaatcgcaacttcgtaaaagttaggtggcgaaaattgctattaagcc 9762513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 37263406 - 37263361
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  37263406 caaaatcgcaacttcgtaaaagttaaggggcgaaaactgctattaa 37263361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 39889823 - 39889768
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    ||||||||| |||||||||| ||||||| | |||||||||||||||||||||||||    
T  39889823 ggccaaaattgcaacttcgtgaaagttaagaggcgaaaactgctattaagcctaaa 39889768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 22192353 - 22192307
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctatt 118  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  22192353 ggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctatt 22192307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 33298596 - 33298646
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| ||||    
T  33298596 ggccaaaatcgcaacttcgtgaaagttaggaggcgaaaactgctatcaagc 33298646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 41487248 - 41487199
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||||||| ||| || |||||||||||||||||||||||||    
T  41487248 caaaatcgcaacttcgtgaaaattcgggggcgaaaactgctattaagcct 41487199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 45457014 - 45456969
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  45457014 caaaatcacaacttcgtaaaagttagggggcgaaaactgttattaa 45456969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 521709 - 521757
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||||    
T  521709 aaaatcgcaacttcgtgaaaattagggggtgaaaactgctattaagcct 521757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 6807224 - 6807168
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    |||||||||||||||||||  ||||||| ||||| |||||| |||||||||||||||    
T  6807224 ggccaaaatcgcaacttcgagaaagttatggggcaaaaactactattaagcctaaat 6807168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 20228279 - 20228231
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 123  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  20228279 caaaatcgcaacttcgtaaaagttaggagacgaaaactgttattaagcc 20228231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 20853426 - 20853374
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||||   ||||||||||||| |||||||||||||||||||||    
T  20853426 caaaatcgcaacttcaagaaagttagggggctaaaactgctattaagcctaaa 20853374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 25897041 - 25896993
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||||    
T  25897041 ggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaa 25896993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 37813213 - 37813161
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||| || || || ||||||||||||||||||||||||||||||||    
T  37813213 ggccaaaatcgtaaatttgtgaaagttagggggcgaaaactgctattaagcct 37813161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 16982675 - 16982624
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||| |||||||||| |||||||||||| |||||||||||| |||||||    
T  16982675 ccaaaattgcaacttcgtgaaagttagggggtgaaaactgctatcaagccta 16982624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 23702172 - 23702121
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||| ||||| || ||||||| |||||||||||||||||||||||||    
T  23702172 ccaaaatcgtaactttgtgaaagttaaggggcgaaaactgctattaagccta 23702121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 9499223 - 9499269
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 121  Q
    ||||||||||||||||||| | ||||||||| |||||||||||||||    
T  9499223 caaaatcgcaacttcgtaatacttagggggccaaaactgctattaag 9499269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 756120 - 756173
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    |||||||||||||||||| |||||  ||||| || |||||||||||||||||||    
T  756120 ggccaaaatcgcaacttcttaaaacatagggagccaaaactgctattaagccta 756173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 28349570 - 28349623
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||| |  ||||||||||||| |||||| ||||||||||||    
T  28349570 ggccaaaatcgcaactttgggaaagttagggggctaaaactactattaagccta 28349623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 29657959 - 29658016
Alignment:
Q  70 atggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||| ||||||||||||||  | |||||||||| ||||||||||||||||| ||||||    
T  29657959 atggtcaaaatcgcaacttgatgaaagttagggagcgaaaactgctattaaacctaaa 29658016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 35213079 - 35213030
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||| || |||||||| |||||||||| ||||||||||||    
T  35213079 caaaatcgcaactttgtcaaagttagtgggcgaaaaccgctattaagcct 35213030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 18092962 - 18092906
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    |||||||||||||||||| |  || ||||||||| ||||||||||||||| ||||||    
T  18092962 ggccaaaatcgcaacttcttgtaacttagggggctaaaactgctattaagtctaaat 18092906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 27545618 - 27545666
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    |||||||||||||||||||| | ||||||||||| ||||| ||||||||    
T  27545618 ggccaaaatcgcaacttcgtgatagttagggggcaaaaaccgctattaa 27545666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 26824098 - 26824148
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||| ||||||    
T  26824098 caaaatcgcaacttcgtgaaagtta-ggggtgaaaactgctattatgcctaa 26824148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 27545390 - 27545339
Alignment:
Q  77 aaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    |||||||||||| | |||||||||  ||| ||||||||||||||||||||||    
T  27545390 aaatcgcaactttggaaaagttagacggctaaaactgctattaagcctaaat 27545339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 41487476 - 41487527
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    ||||||||||||| | ||||||||| |||| |||||||||||||| ||||||    
T  41487476 aaaatcgcaactttggaaaagttagagggctaaaactgctattaaacctaaa 41487527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 41602878 - 41602933
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaa 131  Q
    |||||||||||||  | ||| ||||||||| |||||||||||||||||||| ||||    
T  41602878 aaaatcgcaactttttgaaacttagggggctaaaactgctattaagcctaactaaa 41602933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 521571 - 521525
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    |||||| |||| |||||||||| ||||| ||||||||||||||||||    
T  521571 aaaatcacaacgtcgtaaaagtgaggggacgaaaactgctattaagc 521525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 25144207 - 25144257
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaa 126  Q
    |||||||||||||||| || |||||| |||||||| ||||||||| |||||    
T  25144207 aaaatcgcaacttcgtgaatgttaggaggcgaaaattgctattaaacctaa 25144257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 9498957 - 9498904
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    ||||||||||||||| | | | ||||||||| ||||||| ||||||||||||||    
T  9498957 caaaatcgcaacttcctgatacttagggggccaaaactgttattaagcctaaat 9498904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 14880597 - 14880638
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactg 113  Q
    ||||||||| |||||||||| |||||||||||||||| ||||    
T  14880597 ggccaaaattgcaacttcgtgaaagttagggggcgaacactg 14880638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 17512148 - 17512091
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaata 129  Q
    |||||||||||||||||| | |||  |||||||| |||||||| |||| |||||||||    
T  17512148 ggccaaaatcgcaacttcttgaaatatagggggccaaaactgcaattatgcctaaata 17512091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 32071278 - 32071330
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    ||||||||||||||   |||||||||||| | ||||||||||||||||||||||    
T  32071278 caaaatcgcaactttagaaaagttagggg-ctaaaactgctattaagcctaaat 32071330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 36688263 - 36688316
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaat 128  Q
    ||||||| |||||| | |||||||||||||  ||||||||||||||||| ||||    
T  36688263 caaaatcacaactttgaaaaagttagggggttaaaactgctattaagccaaaat 36688316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 755954 - 755902
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||| | |||  ||| |||| ||||||||||||||||||    
T  755954 ggccaaaatcgcaacttcttgaaacatagagggccaaaactgctattaagcct 755902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 14170473 - 14170421
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||||| |||||  |||||||  |||||||| |||||||||    
T  14170473 ggccaaaatcgcaacttcttaaaacatagggggtcaaaactgcaattaagcct 14170421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 23702401 - 23702449
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||    ||||||||||||| ||||||||||||||||||    
T  23702401 aaaatcgcaacttttggaaagttagggggctaaaactgctattaagcct 23702449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 45177415 - 45177455
Alignment:
Q  18 aaaactcctacagttgcaaaacttagggggcaattttgtaa 58  Q
    |||||| |||||||||||||||||| |||||| ||||||||    
T  45177415 aaaactactacagttgcaaaacttatggggcagttttgtaa 45177455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 45515981 - 45515929
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||| | |||| ||| ||||| |||||||| ||||||||||||    
T  45515981 caaaatcgcaactttgaaaaaattaaggggctaaaactgcaattaagcctaaa 45515929  T

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Target: scaffold0062 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 46123 - 46075
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  46123 aaaatcgcaacttcgtgaaagttagggggcgaaaactgctataaagcct 46075  T

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Target: scaffold0166 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 21920 - 21975
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||||  | ||||||||||||| |||||||||||||||||||||||    
T  21920 ggccaaaatcgcaacagcataaaagttaggggacgaaaactgctattaagcctaaa 21975  T

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Target: scaffold0248 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 673 - 723
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    |||||||||||||||||||||||||||||| | ||||||||||||| ||||    
T  673 ggccaaaatcgcaacttcgtaaaagttaggagacgaaaactgctatgaagc 723  T

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Target: scaffold1458 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 1522 - 1469
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    |||||||||| |||||| || ||||||||||||| |||||||||||||||||||    
T  1522 ggccaaaatctcaactttgtgaaagttagggggctaaaactgctattaagccta 1469  T

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Target: scaffold0515 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 3690 - 3637
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||| |  ||||||||||||| |||||||||||||||||||    
T  3690 ggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 3637  T

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Target: scaffold0306 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 3690 - 3637
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||| |  ||||||||||||| |||||||||||||||||||    
T  3690 ggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 3637  T

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Target: scaffold0809 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 2799 - 2748
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    ||||||| || |||||||||||||||| |||||||||| |||||||||||||    
T  2799 aaaatcgtaaattcgtaaaagttagggtgcgaaaactgttattaagcctaaa 2748  T

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Target: scaffold0417 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 9603 - 9653
Alignment:
Q  75 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||||||||||||||| ||||||||| || ||||||||||||||| ||||    
T  9603 caaaatcgcaacttcgtgaaagttaggaggtgaaaactgctattaaaccta 9653  T

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Target: scaffold0194 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 116
Target Start/End: Complemental strand, 24942 - 24900
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgcta 116  Q
    ||||||||| |||||||||||||||||||| ||||||||||||    
T  24942 ccaaaatcgtaacttcgtaaaagttaggggacgaaaactgcta 24900  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 19086 - 19038
Alignment:
Q  77 aaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 125  Q
    ||||| ||||||||| ||||||| |||||||||||| ||||||||||||    
T  19086 aaatcacaacttcgtgaaagttaaggggcgaaaactactattaagccta 19038  T

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Target: scaffold0025; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 19604 - 19652
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 120  Q
    ||||||||||||||||| | |||||||||||| | ||||||||||||||    
T  19604 ggccaaaatcgcaactttgaaaaagttaggggactaaaactgctattaa 19652  T

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Target: scaffold0725 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 6698 - 6749
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaa 127  Q
    |||||||||||||  | ||| ||||||||| |||||||||||||||||||||    
T  6698 aaaatcgcaacttgttgaaacttagggggctaaaactgctattaagcctaaa 6749  T

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Target: scaffold0250 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 3623 - 3573
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagc 122  Q
    ||||||||||| ||||| || ||||||||  ||||||||||||||||||||    
T  3623 ggccaaaatcgtaactttgtgaaagttagaaggcgaaaactgctattaagc 3573  T

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Target: scaffold0328 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 9681 - 9742
Alignment:
Q  72 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctaaataaaaatga 136  Q
    ||||| |||| ||||||||| ||||||||||  ||||||| |||||||||||| |||||||||||    
T  9681 ggccagaatcacaacttcgtgaaagttaggg--cgaaaacggctattaagcct-aataaaaatga 9742  T

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Target: scaffold0372 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 171 - 123
Alignment:
Q  76 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 124  Q
    ||||||||||||| |  ||||||||| ||| ||||||||||||||||||    
T  171 aaaatcgcaactttgagaaagttaggaggctaaaactgctattaagcct 123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 20183 - 20219
Alignment:
Q  74 ccaaaatcgcaacttcgtaaaagttagggggcgaaaa 110  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  20183 ccaaaatcacaacttcgtaaaaattagggggcgaaaa 20219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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