View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9812_high_16 (Length: 247)
Name: NF9812_high_16
Description: NF9812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9812_high_16 |
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Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 37169896 - 37169657
Alignment:
| Q |
1 |
ttccaaatacttacacaagtacttactattatataataagataagttgaaataacttctactaattagatgctcccatagtatggatgttacctacgaca |
100 |
Q |
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| T |
37169896 |
ttccaaatacttacacaagtacttactattatataataagataagttgaaataacttctactaattagatgctcccatggtatggatgttacctacgaca |
37169797 |
T |
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| Q |
101 |
aagtatttacttgacaaaacttatgcatactagctatggtaccatcaaacttcacattacatatctatggaatttataatatgtaccagctaaaagtcga |
200 |
Q |
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||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
37169796 |
aagtatttacttgacaaaacttatgtatacaagctatggtaccatcaaacttcacattacatatctatggaatttataatatgtactagctaaaagtcga |
37169697 |
T |
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| Q |
201 |
tggaaaactaatggtgtagacaggtccacaatagcctatg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
37169696 |
tggaaaactaatggtgtagacaggtccacaatagcctatg |
37169657 |
T |
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