View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9813_high_8 (Length: 216)
Name: NF9813_high_8
Description: NF9813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9813_high_8 |
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Alignment Details
Target: chr3 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 8 - 197
Target Start/End: Original strand, 40380668 - 40380857
Alignment:
| Q |
8 |
aggagcagagaaagaaataccacaaaatcaacaaattaatccaaaaggaacaaaaccaaggccagttgaacctcaggtgattgtaaaagatcaaggcatg |
107 |
Q |
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| T |
40380668 |
aggagaagagaaagaaataccacaaaatcaacaaattaatccaaaaggaacaaaaccaaggccagttgaacctcaggtgattgtaaaagatcaaggcatg |
40380767 |
T |
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| Q |
108 |
accagggaatacggaggacagtggttgagctgtgccacgcgacatgtgaggatctatgcagcttatattgatccagaaactagtgctttt |
197 |
Q |
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| T |
40380768 |
accagggaatacggaggacagtggttgagttgtgccacgcgacatgtgaggatctatgcagcttatattgatccagaaactagtgctttt |
40380857 |
T |
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