View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9813_low_8 (Length: 277)
Name: NF9813_low_8
Description: NF9813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9813_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 4680680 - 4680937
Alignment:
| Q |
1 |
catatctattcttggcaatttctaagttacgtactacattatttcttatccttcaagtaacaaacacgtatgacatattcccagacaatattattaatta |
100 |
Q |
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| T |
4680680 |
catatctgttcttggcaatttctaagttacgtactacattatttcttatccttcaagtaacaaacacgtatgacatattcccagacaatattattaatta |
4680779 |
T |
|
| Q |
101 |
attaattcactataagatgcttgcaagttgaagaaactcaggtatttgacaacaatttgcgatgacttgcacgaacaaagctgaaagaggtaaatattca |
200 |
Q |
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| T |
4680780 |
attaattcactataagatgcttgcaagttgaagaaactcaggtatttgacaacaatttgcgatgacttgcacgaacaaagctgaaagaggtaaatattca |
4680879 |
T |
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| Q |
201 |
agaaaaagaaagggactccgtatgaatccagcatcatccaatttcataactgaataaa |
258 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
4680880 |
agaaaaagaaagggactccgtatgaatccagcatcatccaatttcataactaaataaa |
4680937 |
T |
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